NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F060778

Metagenome / Metatranscriptome Family F060778

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F060778
Family Type Metagenome / Metatranscriptome
Number of Sequences 132
Average Sequence Length 69 residues
Representative Sequence VSLNKNKFDGVLAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG
Number of Associated Samples 97
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 63.36 %
% of genes near scaffold ends (potentially truncated) 23.48 %
% of genes from short scaffolds (< 2000 bps) 90.15 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (81.818 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(16.667 % of family members)
Environment Ontology (ENVO) Unclassified
(25.758 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.727 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.12%    β-sheet: 18.75%    Coil/Unstructured: 53.13%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.52.1.18: Hjc-liked1gefa_1gef0.60458
d.92.1.5: Neurolysin-liked1i1ip_1i1i0.59111
c.52.1.0: automated matchesd2wcwa_2wcw0.58867
c.52.1.32: XisH-liked2inba12inb0.58848
c.52.1.35: Virus-type replication-repair nuclease (VRR-Nuc)d4qbna_4qbn0.58254


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF00166Cpn10 15.91
PF01434Peptidase_M41 11.36
PF00118Cpn60_TCP1 6.06
PF01740STAS 5.30
PF01145Band_7 3.79
PF00459Inositol_P 3.03
PF01381HTH_3 1.52
PF01165Ribosomal_S21 1.52
PF04203Sortase 0.76
PF02518HATPase_c 0.76
PF13358DDE_3 0.76
PF07366SnoaL 0.76
PF04055Radical_SAM 0.76
PF13188PAS_8 0.76
PF07690MFS_1 0.76
PF00027cNMP_binding 0.76
PF00072Response_reg 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 15.91
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 11.36
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 6.06
COG0828Ribosomal protein S21Translation, ribosomal structure and biogenesis [J] 1.52
COG3764Sortase (surface protein transpeptidase)Cell wall/membrane/envelope biogenesis [M] 0.76


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.82 %
UnclassifiedrootN/A18.18 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_106968324All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300004463|Ga0063356_105661555All Organisms → cellular organisms → Bacteria → Acidobacteria536Open in IMG/M
3300004480|Ga0062592_101401969All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300004643|Ga0062591_102866555Not Available511Open in IMG/M
3300004799|Ga0058863_11673361Not Available1258Open in IMG/M
3300004803|Ga0058862_12135641All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300005166|Ga0066674_10083670All Organisms → cellular organisms → Bacteria1471Open in IMG/M
3300005179|Ga0066684_11019567All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300005293|Ga0065715_10571650All Organisms → cellular organisms → Bacteria → Acidobacteria673Open in IMG/M
3300005294|Ga0065705_10694033Not Available656Open in IMG/M
3300005333|Ga0070677_10824726All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300005353|Ga0070669_101272165All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300005365|Ga0070688_100856877Not Available714Open in IMG/M
3300005436|Ga0070713_100159187All Organisms → cellular organisms → Bacteria2014Open in IMG/M
3300005446|Ga0066686_10240820All Organisms → cellular organisms → Bacteria → Proteobacteria1219Open in IMG/M
3300005446|Ga0066686_10862395All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300005451|Ga0066681_10311993Not Available963Open in IMG/M
3300005451|Ga0066681_10961850All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300005557|Ga0066704_10239606Not Available1231Open in IMG/M
3300005568|Ga0066703_10155282Not Available1376Open in IMG/M
3300005586|Ga0066691_10085349All Organisms → cellular organisms → Bacteria → Acidobacteria1754Open in IMG/M
3300006046|Ga0066652_100746993All Organisms → cellular organisms → Bacteria → Acidobacteria933Open in IMG/M
3300006049|Ga0075417_10125454All Organisms → cellular organisms → Bacteria → Acidobacteria1181Open in IMG/M
3300006049|Ga0075417_10227725All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium889Open in IMG/M
3300006791|Ga0066653_10123505Not Available1219Open in IMG/M
3300006844|Ga0075428_100084491All Organisms → cellular organisms → Bacteria3463Open in IMG/M
3300006854|Ga0075425_100051361All Organisms → cellular organisms → Bacteria4617Open in IMG/M
3300006854|Ga0075425_100421984All Organisms → cellular organisms → Bacteria → Acidobacteria1536Open in IMG/M
3300006871|Ga0075434_100480539All Organisms → cellular organisms → Bacteria → Acidobacteria1263Open in IMG/M
3300006904|Ga0075424_100586281All Organisms → cellular organisms → Bacteria → Acidobacteria1191Open in IMG/M
3300006904|Ga0075424_100615479All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1160Open in IMG/M
3300006904|Ga0075424_101117976All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium839Open in IMG/M
3300006904|Ga0075424_102680921All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300006954|Ga0079219_11220979All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium653Open in IMG/M
3300007004|Ga0079218_10672768All Organisms → cellular organisms → Bacteria → Acidobacteria964Open in IMG/M
3300007076|Ga0075435_100848468All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium796Open in IMG/M
3300009012|Ga0066710_100149212All Organisms → cellular organisms → Bacteria3248Open in IMG/M
3300009094|Ga0111539_10488806All Organisms → cellular organisms → Bacteria → Acidobacteria1434Open in IMG/M
3300009094|Ga0111539_10689801All Organisms → cellular organisms → Bacteria → Acidobacteria1189Open in IMG/M
3300009094|Ga0111539_10745291All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1140Open in IMG/M
3300009094|Ga0111539_12310908All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300009147|Ga0114129_10196968All Organisms → cellular organisms → Bacteria2731Open in IMG/M
3300009162|Ga0075423_10282537All Organisms → cellular organisms → Bacteria → Acidobacteria1739Open in IMG/M
3300009162|Ga0075423_10367968All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300009176|Ga0105242_11154026All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300009177|Ga0105248_11212804Not Available853Open in IMG/M
3300009597|Ga0105259_1118811All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300010087|Ga0127492_1106287All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300010103|Ga0127500_1015799All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300010301|Ga0134070_10105973All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300010304|Ga0134088_10012903All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3603Open in IMG/M
3300010304|Ga0134088_10284775All Organisms → cellular organisms → Bacteria → Acidobacteria797Open in IMG/M
3300010323|Ga0134086_10354950All Organisms → cellular organisms → Bacteria → Acidobacteria580Open in IMG/M
3300010336|Ga0134071_10041355All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2058Open in IMG/M
3300010336|Ga0134071_10151197All Organisms → cellular organisms → Bacteria1129Open in IMG/M
3300010397|Ga0134124_10062787All Organisms → cellular organisms → Bacteria3148Open in IMG/M
3300010401|Ga0134121_10327694Not Available1364Open in IMG/M
3300010401|Ga0134121_13141369Not Available510Open in IMG/M
3300010403|Ga0134123_13262507All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300011120|Ga0150983_12201146All Organisms → cellular organisms → Bacteria → Acidobacteria965Open in IMG/M
3300011120|Ga0150983_13970539All Organisms → cellular organisms → Bacteria → Acidobacteria1014Open in IMG/M
3300011435|Ga0137426_1039363All Organisms → cellular organisms → Bacteria → Acidobacteria1212Open in IMG/M
3300012122|Ga0137332_1040961All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300012167|Ga0137319_1060468Not Available762Open in IMG/M
3300012206|Ga0137380_11691542All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300012350|Ga0137372_10449153Not Available967Open in IMG/M
3300012379|Ga0134058_1075003All Organisms → cellular organisms → Bacteria → Acidobacteria1052Open in IMG/M
3300012379|Ga0134058_1115642All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300012380|Ga0134047_1058960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium717Open in IMG/M
3300012393|Ga0134052_1306611All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300012396|Ga0134057_1012788All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300012922|Ga0137394_11055414All Organisms → cellular organisms → Bacteria → Acidobacteria674Open in IMG/M
3300012957|Ga0164303_11342019All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300012960|Ga0164301_11277159Not Available594Open in IMG/M
3300012989|Ga0164305_11697909All Organisms → cellular organisms → Bacteria → Acidobacteria567Open in IMG/M
3300013306|Ga0163162_12465698All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300013308|Ga0157375_12268855All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300014325|Ga0163163_10270331Not Available1751Open in IMG/M
3300014745|Ga0157377_10349555All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium991Open in IMG/M
3300015358|Ga0134089_10024107All Organisms → cellular organisms → Bacteria2103Open in IMG/M
3300015358|Ga0134089_10107245All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1076Open in IMG/M
3300015371|Ga0132258_10838842All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2319Open in IMG/M
3300015371|Ga0132258_11426091All Organisms → cellular organisms → Bacteria → Acidobacteria1749Open in IMG/M
3300015371|Ga0132258_11446211All Organisms → cellular organisms → Bacteria → Acidobacteria1736Open in IMG/M
3300015371|Ga0132258_11667071All Organisms → cellular organisms → Bacteria → Acidobacteria1608Open in IMG/M
3300015371|Ga0132258_11713677All Organisms → cellular organisms → Bacteria → Acidobacteria1585Open in IMG/M
3300015371|Ga0132258_12389110All Organisms → cellular organisms → Bacteria → Acidobacteria1324Open in IMG/M
3300015371|Ga0132258_13112279All Organisms → cellular organisms → Bacteria1147Open in IMG/M
3300015371|Ga0132258_13278884Not Available1114Open in IMG/M
3300015372|Ga0132256_100469782All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1366Open in IMG/M
3300015372|Ga0132256_100533143All Organisms → cellular organisms → Bacteria1286Open in IMG/M
3300015372|Ga0132256_100694403All Organisms → cellular organisms → Bacteria → Acidobacteria1133Open in IMG/M
3300015372|Ga0132256_102240580All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300015373|Ga0132257_100715487All Organisms → cellular organisms → Bacteria → Acidobacteria1245Open in IMG/M
3300015373|Ga0132257_101024394All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300015374|Ga0132255_101249010Not Available1120Open in IMG/M
3300015374|Ga0132255_101338031All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1081Open in IMG/M
3300015374|Ga0132255_104015153All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium625Open in IMG/M
3300015374|Ga0132255_104798867All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300017656|Ga0134112_10160708All Organisms → cellular organisms → Bacteria → Acidobacteria867Open in IMG/M
3300017659|Ga0134083_10015683All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2612Open in IMG/M
3300017659|Ga0134083_10090070Not Available1200Open in IMG/M
3300017659|Ga0134083_10221853All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium785Open in IMG/M
3300018431|Ga0066655_10250635All Organisms → cellular organisms → Bacteria → Acidobacteria1130Open in IMG/M
3300019228|Ga0180119_1169302All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300019263|Ga0184647_1199148All Organisms → cellular organisms → Bacteria → Acidobacteria741Open in IMG/M
3300021168|Ga0210406_10368934All Organisms → cellular organisms → Bacteria → Acidobacteria1155Open in IMG/M
3300021168|Ga0210406_10985389All Organisms → cellular organisms → Bacteria → Acidobacteria628Open in IMG/M
3300021403|Ga0210397_10101773Not Available1942Open in IMG/M
3300022726|Ga0242654_10244513All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300023072|Ga0247799_1020965All Organisms → cellular organisms → Bacteria → Acidobacteria997Open in IMG/M
3300024251|Ga0247679_1060317All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300025941|Ga0207711_11834347Not Available549Open in IMG/M
3300025960|Ga0207651_11291645Not Available656Open in IMG/M
3300026121|Ga0207683_11069306Not Available749Open in IMG/M
3300026307|Ga0209469_1048125All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300026324|Ga0209470_1003324All Organisms → cellular organisms → Bacteria11144Open in IMG/M
3300027873|Ga0209814_10041951All Organisms → cellular organisms → Bacteria → Acidobacteria1904Open in IMG/M
3300027873|Ga0209814_10186988All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium893Open in IMG/M
3300027880|Ga0209481_10670500All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300027909|Ga0209382_11290446All Organisms → cellular organisms → Bacteria → Acidobacteria741Open in IMG/M
3300028146|Ga0247682_1110437All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300028380|Ga0268265_11589027All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300031057|Ga0170834_102431213All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300031226|Ga0307497_10769872All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300031720|Ga0307469_11146030All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300031820|Ga0307473_10151446Not Available1320Open in IMG/M
3300032180|Ga0307471_101594886All Organisms → cellular organisms → Bacteria → Acidobacteria809Open in IMG/M
3300032205|Ga0307472_101202426All Organisms → cellular organisms → Bacteria → Acidobacteria724Open in IMG/M
3300032828|Ga0335080_11664163All Organisms → cellular organisms → Bacteria → Acidobacteria627Open in IMG/M
3300034819|Ga0373958_0085985All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere16.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil14.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.61%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere10.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.55%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.03%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.03%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.03%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.03%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere3.03%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.52%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.52%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.52%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated1.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.52%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.52%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.76%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.76%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.76%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.76%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009597Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299EnvironmentalOpen in IMG/M
3300010087Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010103Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011435Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2EnvironmentalOpen in IMG/M
3300012122Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT200_2EnvironmentalOpen in IMG/M
3300012167Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012380Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300019228Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300024251Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028146Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10696832423300000955SoilVSLNENKFDGVIAELRDQGLQVTLCSALNQTWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0063356_10566155513300004463Arabidopsis Thaliana RhizosphereMTSNNHKFDAVVAELRDQGLAVTLHSALNETWYIKGDGIYVGYIASGLEMLELKRTNQLNIRGIQSLC*
Ga0062592_10140196923300004480SoilMTLNSDKFDGVVAELQDQGLTVTVHSALNETWYVKGDGIYVGYIASGAEMLDLKRTNQLNIRGIQSLG*
Ga0062591_10286655513300004643SoilMVSVSDQKASLSNPEFDRVLVELRKQGLTVTLHSALNETWYIKGEELYTGYIASAAELLELKAANKLNLRGIKSLG*
Ga0058863_1167336113300004799Host-AssociatedGGLVLLEKTEFDGVLAELRGQGLKVTACSVLNQTWYIKDDALFTGYIASGAELLELKSTNKLNMRGIRSLG*
Ga0058862_1213564123300004803Host-AssociatedEKTEFDGVLAELRGQGLKVTACSVLNQTWYIKDDALFTGYIASGAELLELKSTNKLNMRGIRSLG*
Ga0066674_1008367023300005166SoilVSLNKNKFDGVLAELREQGLEVTVCIALNETWYIKGDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0066684_1101956723300005179SoilVSLNKNKFDDALAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0065715_1057165023300005293Miscanthus RhizosphereVSFNENRFEGVVAELREQGLEVTVCSAIDDAWYINDDNRLFSDYIASGNELLALKSANRLNIHGIKSLR*
Ga0065705_1069403313300005294Switchgrass RhizosphereQKASLSNPDFDSVLAELREQGLKVTLHSALNETWYIKGEELYTGYIASVAELLELKAANELNIRGIKSLG*
Ga0070677_1082472613300005333Miscanthus RhizosphereSFNENRFEGVVAELREQGLEVTVCSAIDDAWYINDDNRLFSDYIASGNELLALKSANRLNIHGIKSLR*
Ga0070669_10127216513300005353Switchgrass RhizosphereMVSVSDQKASLSNPDFDSVLAELREQGLKVTLHSALNETWYIKGEELYTGYIASVAELLELKAANELNIRGIK
Ga0070688_10085687723300005365Switchgrass RhizosphereMVSVSDQKASLSNPEFDRVLVELRKQGLTVKLHSALNETWYIKGEELYTGYIASAAELLELKAANKLNLRGIKSLG*
Ga0070713_10015918743300005436Corn, Switchgrass And Miscanthus RhizosphereVSLNENKVDGAIAELRGQGLQVTVFSKLNETWYIKGDGIFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0066686_1024082013300005446SoilVSLNENKFDGVIAELREQGLQVTLCSALNETWYIKDDGIFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0066686_1086239513300005446SoilVPLNQNKIDCALAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLN
Ga0066681_1031199333300005451SoilAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0066681_1096185023300005451SoilVSLNKNKFDGVLAELREQGLEVTVCIALNETWYIKGDGLFTGYIASGAELLELKSANKL
Ga0066704_1023960613300005557SoilMSLNKNKFDDALAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0066703_1015528223300005568SoilMSLNKNKFNDALAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0066691_1008534913300005586SoilDALAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0066652_10074699323300006046SoilVSLNENKFDCVLAELREQGLDVTACSMLNETWYIRDEELFTGYIASGTELLELKSVNKLNISGIKSLG*
Ga0075417_1012545423300006049Populus RhizosphereVSLNENKFDGVIAELRDQGLQVTLCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0075417_1022772513300006049Populus RhizosphereVSLNKNKFDSVVAELREQGLEVTVCSAVNETWYIKDDGLITCYIASGAELLELKSANRLNIRGIKSLG*
Ga0066653_1012350533300006791SoilVSLNKNKFDGVLAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0075428_10008449163300006844Populus RhizosphereVSLNENKFDGVVAELRDQGLQVTLCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0075425_10005136123300006854Populus RhizosphereVSLNTNKFDGVLAELRDQGLQVTLCNALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0075425_10042198413300006854Populus RhizosphereVSLNKNKFDGVLAELREQGLQVTLCSALNETWYIKDDGIFTGYIASGAELLELKRANKLNIRGIKSLG*
Ga0075434_10048053913300006871Populus RhizosphereVSLNTNKFDGVLAELRDQGLQVTLCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0075424_10058628133300006904Populus RhizosphereVSLNKNEFDGVLAELRAQGLQVTLCNALNETWYIKDDGILTGYIASGAELLELKSANKLNIRGIQSLG*
Ga0075424_10061547913300006904Populus RhizosphereMTSNDRKFDDVVAELREQGLTVKVHSVLNETWYIKDHRDFSGYIASGAEMLELKRANKLNIPGIKSLG*
Ga0075424_10111797613300006904Populus RhizosphereVSLNENKFDNVIAELREQGLDVTVCSALNETWYIKGDAIFTGYIASGAELLELKSANK
Ga0075424_10268092113300006904Populus RhizosphereMALVSDQKASLRNPHFDSILAELREQGLKVTLHSASNETWFIKGEELYMGYIASVAELLELKAANK
Ga0079219_1122097933300006954Agricultural SoilLVLLEKTEFDGVLAELRGQGLKVTACSVLNQTWYIKDDALFTGYIASGAELLELKSTNKLNMRGIRSLG*
Ga0079218_1067276813300007004Agricultural SoilVLRETSRQSFDGVVAELREQGLTISVHNASNETWYVKGDGLYTGYIATGTELLELKRANKLNILGIKSLG*
Ga0075435_10084846823300007076Populus RhizosphereVSLNKNEFDGVLAELRAQGLQVTLCNALNETWYIKDDGILTGYIASGAELLELKSANKLNIRGI
Ga0066710_10014921233300009012Grasslands SoilVAELREQGLQVQVHSAANDTWYVKGDGIYIGYIASGAELLELKSASKLNIRGIKSLG
Ga0111539_1048880633300009094Populus RhizosphereMTLNSHEFDGVVAELQEQGLTVTVHSALNETWYVKGDGIYVGYIASGAEMLDLKRTNQLNIRGIQSLG*
Ga0111539_1068980123300009094Populus RhizosphereVSLNKNKFDGVLAELREQGLEVTVCGALNETWYINDYGIFTGYIASGAELLELKSTNKLNIRGIKSLG*
Ga0111539_1074529123300009094Populus RhizosphereVSFNENRFEGVVAELREQGLEVTVCSAIDDAWYINDDNRLFSDYIASGNELLALKSANRLNIHGIKSLG*
Ga0111539_1231090813300009094Populus RhizosphereMVSVLYEAGTEVKSDTHKFDDLVAELREQGLAVTVHSAFNETWYVKGDGIYTGYIASGSEMLELKRTNQLNLRGIQSLG*
Ga0114129_1019696823300009147Populus RhizosphereMGLEAATPARGEPVSLNKNKFDSVVAELREQGLQVTVCSAVNETWYIKDDGLITCYIASGAELLELKSANRLNIRGIKSLG*
Ga0075423_1028253743300009162Populus RhizosphereAELREQGLQVTLCSALNETWYIKDDGIFTGYIASGAELLELKRANKLNIRGIKSLG*
Ga0075423_1036796843300009162Populus RhizosphereGVIAELRDQGLQVTLCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0105242_1115402623300009176Miscanthus RhizosphereMVSVSDQKASLSNPEFDRVLVELRKQGLTVTLHNALNETWFIKGEELYTGYIASVAELLELKAANELNIRGIKSLG*
Ga0105248_1121280423300009177Switchgrass RhizosphereMEEKMATLNRAQFDEALDELRKQGLQVRLHRASDDTWYVKSEGTYLGYVASGAELLELKTANKLNIHGIKSLG*
Ga0105259_111881123300009597SoilMLDNHKLDHRFDGVVSELRDQGLQVSVHSASNETWFVKGDGIFTGYIATGAELLELKRAEKLNIEGIKSLG*
Ga0127492_110628723300010087Grasslands SoilVSLNRNKLDCALAELREQGLEVTACSALNETWYIKDVGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0127500_101579913300010103Grasslands SoilVSLNENKIDCALAELREQGLEVTVCSALNETWYIKGDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0134070_1010597323300010301Grasslands SoilVSLNKNKFDGVLAELREQGLEVTVCRALNETWYIKGDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0134088_1001290313300010304Grasslands SoilMTSNNHDFDAVLTELRQQGLEVTVCSALKETWYIKGSGIHIWYIATGAELLQLKRANKLNLRGIKSLDSSPDHP*
Ga0134088_1028477513300010304Grasslands SoilMTTLNRDKFDGAVAELREQGLQVKVHSAANDTWYVKGDGIYIGYIATGAELLELKSASKLNIRGIKSLG*
Ga0134086_1035495023300010323Grasslands SoilVSLNKNKFDGVLAELREQGLEVTVCRALNETWYIKSDGLFTGYIASGAELLELKSANRLNIRGIKSLG*
Ga0134071_1004135523300010336Grasslands SoilMTSNNHNFDAVLTELRQQGLEVTVCSALKETWYIKGSGIHIWYIATGAELLQLKRANKLNLRGIKSLDSSPDHP*
Ga0134071_1015119733300010336Grasslands SoilVSLNKNKFDGVLAELREQGLEVTVCRALNETWYIKSDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0134124_1006278743300010397Terrestrial SoilVSLEKDKLDDVLDELREQGLRVTLCDALNETWYIKDDGIFTGYIASGAELLELKSANQLNLRGIQSLG*
Ga0134121_1032769433300010401Terrestrial SoilVSLEKDKLDDVLDELREQGLRVTLCDALNETWYIKDDGIFTGYIASGAELLDLKSANQLNLRGIQSLG*
Ga0134121_1314136913300010401Terrestrial SoilRHSEDMVSVSDQKASLSPPDFDSVLAELREQGLKVTLHSALNETWYIKGEELYTGYIASVAELLELKAANQLNIRGIKSLG*
Ga0134123_1326250713300010403Terrestrial SoilVSLNENKFDGVLAELREQGLKVAASRMFTDTWYIKDDGIFTGYIASGAELLELKSSNRLNIRGIKSLR*
Ga0150983_1220114613300011120Forest SoilVGRGGSVSLEKTEFDGVLAELREQGLKVTVSSALNETWYIKDDGIFTGYIVSGAELLELKSANKLNIRGIKSLG*
Ga0150983_1397053923300011120Forest SoilVSLEKNEFDGVLAELREQGLKVTVCSVLNETWYIKDDGLFTGYIASVAELLELKSENKLNIRGIKSLG*
Ga0137426_103936313300011435SoilVKDSILDNHELDHRFDGVVSELRDQGLQVSVHSASNETWFVKGDGIFTGYIATGAELLELKRAEKLNIEGIKSLG*
Ga0137332_104096113300012122SoilSDKLDQGVEGVVAELRDRGLQGAVHSASNETWFVKGDGIFTGYIATGAELLELKRAEKLNIEGIKSLG*
Ga0137319_106046813300012167SoilMLDNHKLDHRFDGVVSELRDQGLQVSVHSASNETWFVKGDGIFTGYIATGAELLELKRAEKLNIEGIKSL
Ga0137380_1169154213300012206Vadose Zone SoilVAELREQGLQVQVHSAANDTWYVKGDGIYIGYIASGAELLELKSASKLNIRGIKSLG*
Ga0137372_1044915323300012350Vadose Zone SoilVLDKNQFDTVLAELREQGLDVTLCSVVNETWYIKDEERLFTGYIASGAELLELKSANRLNIRGIKSLG*
Ga0137361_1040227533300012362Vadose Zone SoilVAELREQGLTVTVHSASNDTWYVKGDGLYIGYVASSAELLELKRANKLNILGIKSLG*
Ga0134058_107500323300012379Grasslands SoilVSLNENKIDCALAELREQGLEVTACSALNETWYIKDVGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0134058_111564223300012379Grasslands SoilVSLNKNKFDGVLAELREQGLEVTVCRALNETWYIKSDGLFTGYIASGAVLLELKSVNKLNIRGIKSLG*
Ga0134047_105896023300012380Grasslands SoilMTSNIHKFDGVVAELREQGLTVKVHSALNETWYVKGDGVFNGYIVSGAEMLELKRANQLNIRGIKSLD*
Ga0134052_130661123300012393Grasslands SoilVSLNRNKLDCALAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0134057_101278823300012396Grasslands SoilVSLNKNKFDGVLAELREQGLEVTVCRALNETWYIKSDGLFTGYIASGAELLELKSANKLNIR
Ga0137394_1105541423300012922Vadose Zone SoilVSLNKNKFDGVLADLREQGLKVTVCSALNETWYIKDDGIFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0164303_1134201913300012957SoilVPLNKNKFDGPVAELREQGLEVTVCSVLNETWYIKDDGIFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0164301_1127715923300012960SoilCRHSEDMVSVSDQKASLSPPDFDSVLAELREQGLKVTLHSALNETWYIKGEELYTGYIASVAELLELKAAKGLNIRGIKSLG*
Ga0164305_1169790913300012989SoilVSLNKNEFDGVLAELRAQGLQVTLCNALNETWYIKDDGILTGYIASGAELLELKSANKLNIRG
Ga0163162_1246569813300013306Switchgrass RhizosphereMVSVSDQKASLSTTDFDSVLAELREQGLKVTLHSALNETWYIKGEELYTGYIASAAELLELKAANKLNLRGI
Ga0157375_1226885513300013308Miscanthus RhizosphereMVSVSDQKASLSNPDFDSVLAELREQGLKVTLHSALNETWYIKGEELYTGYIASAAELLELKAANKLNLRGIKSLG*
Ga0163163_1027033133300014325Switchgrass RhizosphereMVSVSDQKASLSNPDFDSVLAELREQGLTVTLHNALNETWFIKGEELYTGYIASVAELLELKAANESNIRGIKSLG*
Ga0157377_1034955523300014745Miscanthus RhizosphereVSLNKNRFDGVVAELREQGLEVTVCSAIDDAWYINDDNLLFSDCIASGNELLALKSANLLNIHGIKSLR*
Ga0134089_1002410743300015358Grasslands SoilVSLNKNKFDGVLAELREQGLEVTVCIALNETWYIKGDGLFTGYIASGAELLELKSANKLNIRGI
Ga0134089_1010724523300015358Grasslands SoilSDNHNFDGVLTELRQQGLEVTVCSALKETWYIKGSGIHIWYIATGAELLQLKRANKLNLRGIKSLDSSPDHP*
Ga0132258_1083884233300015371Arabidopsis RhizosphereMTLNNKFDDAVGELREQGLEVTVHSASNNTWRLKGDGIYTGYIASGAELLELKSANKLNILGIKSLG*
Ga0132258_1142609113300015371Arabidopsis RhizosphereVSLNKNKFDGVLAELREQGLKVTVCTAVNDTWYIKDDGICNGYIASGAELLELKSVNKLNIRGIKSLR*
Ga0132258_1144621123300015371Arabidopsis RhizosphereMTSNSEKFNDAVAELRDQGLQVMVHSAANDTWYIKGDGIYIGYIATGAELLELKSADNLNILGVKSLG*
Ga0132258_1166707113300015371Arabidopsis RhizosphereVSLNKNEFDGVLAELREQGLQVTLCSALNETWYIKDDGIFTGYIASGAELLELKRANKLNIRGIKSLG*
Ga0132258_1171367713300015371Arabidopsis RhizosphereMALVSDQKASLRNPHFDSILAELREQGLKVTLHSASNETWFIKGEELYMGYIASVAELLELKAANKLNISGIKSLG*
Ga0132258_1238911023300015371Arabidopsis RhizosphereVLFEKSKFDGVLAELREQGLKVTACSVLNETWYIKDDALFTGYIASAAELLELKSTNKLNIGGIKSLG*
Ga0132258_1311227923300015371Arabidopsis RhizosphereVNRALMGLEAAHQPEENMSLNENKFEGVINELREQGLQVTLCSALNETWYIKDDGIFMGYIASGAELLELKDANKLNIRGIKSLG*
Ga0132258_1327888413300015371Arabidopsis RhizosphereMVSVSDQKASLSNPEFDRVLVELRKQGLTVTLHSASNETWYVKGEEPYTGYIASAAELLELKAANKLNLRGIKSLG*
Ga0132256_10046978223300015372Arabidopsis RhizosphereMTTTLATHKYDDAVDELREQGLNVSVHSVLNETWYIKGDGIYIGYVASGDELLELKRTHKLNLDGIKSLG*
Ga0132256_10053314323300015372Arabidopsis RhizosphereMKLEAAHQPEENMSLNENKFEGVINELREQGLQVTLCSALNETWYIKDDGIFMGYIASGAELLELKDANKLNIRGIKSLG*
Ga0132256_10069440323300015372Arabidopsis RhizosphereVFFNKNKFDDVLAELREQGLEVTLCSALNETWYINDDGIFTGYIASGAELLELKSANKLNIRGIKSLG*
Ga0132256_10224058013300015372Arabidopsis RhizosphereVSLNKNKFDGVLAELREQGLEVTVCGALNETWYINDYGIFTGYIASGAELLELKRANKLNIRGIKSLG*
Ga0132257_10071548733300015373Arabidopsis RhizosphereLAELREQGLQVTLCSALNETWYIKDDGIFTGYIASGAELLELKRANKLNIRGIKSLG*
Ga0132257_10102439423300015373Arabidopsis RhizosphereVSLNKNKFAGVLAELREQGLKVTVSSALNETWYIKDDGIFTGYIASGAELLELKSTNKLNIRGIKSLG*
Ga0132255_10124901013300015374Arabidopsis RhizosphereMTTTLATHKYDDAVDELREQGLNVSVHSVLNETWYIKGDGIYIGYVASGDELLELKRTNKLNINGIKSLG*
Ga0132255_10133803123300015374Arabidopsis RhizosphereMALVSDQKASLRNPHFDSILAELREQGLKVTLHSASNETWFIKGEELYMGYIASVAELLELKAANQLNIRGIKSLG*
Ga0132255_10401515313300015374Arabidopsis RhizosphereLAQGGLVLFEKSKFDGVLAELREQGLKVTACSVLNETWYIKDDALFTGYIASAAELLELKSTNKLNIGGIKSLG*
Ga0132255_10479886713300015374Arabidopsis RhizosphereMTLAEMTLNDQKFDGVVAELREQGLTVTVHNGLNETWYVKGDGIYTGYIASGAEMVELKRTNQLNIRGIQSLG*
Ga0134112_1016070823300017656Grasslands SoilVSLNKNKVDDALAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0134083_1001568333300017659Grasslands SoilMTSNNHNFDAVLTELRQQGLEVTVCSALKETWYIKGSGIHIWYIATGAELLQLKRANKLNLRGIKSLDSSPDHP
Ga0134083_1009007023300017659Grasslands SoilVSLNENKIDCALAELREQGLEVTACSALNETWYIKDVGLFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0134083_1022185323300017659Grasslands SoilMTSNIHKFDGVVAELREQGLTVKVHSALNETWYVKGDGVFNGYIVSGAEMLELKRANQLNIRGIKSLN
Ga0066655_1025063523300018431Grasslands SoilMSLNKNKFDDALAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0180119_116930213300019228Groundwater SedimentMLDNHKLDHRFDGVVSELRDQGLQVSVHSASNETWFVKGDGIFTGYIATGAELLELKRAEKLNIEGIKSLG
Ga0184647_119914833300019263Groundwater SedimentMSIDHRFDGVVAELEGQGLKVSVHSALNETWFVKDDGIYKGYIATGTELLELKNANKLNIRGIQSLG
Ga0210406_1036893423300021168SoilVLSEKTKFDGVLAELREQGLKVTVCSVLNETWYIKDDGLFTGYIASVAELLELKSENKLNIRGIKSLG
Ga0210406_1098538913300021168SoilVPLKENKFDGLIAELRGQGLEVTVFSPLNETWYIKGDAIFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0210397_1010177333300021403SoilVSLDKTEFDGALAELREQGLKVTVFSALNETWYIKDDGLFTGYIVSGAELLELKSANKLDIRGIKSLG
Ga0242654_1024451313300022726SoilRGGFVLSEKTKFDGVLAELREQGLKVTVCSVLNETWYIKDDGLFTGYIASVAELLELKSENKLNIRGIKSLG
Ga0247799_102096533300023072SoilMTLDSHELDGVVAELQEQGLTVTVHSASNETWYVKGDGIYTGYIASAAEMLELKRTNQLNIRGIQSLG
Ga0247679_106031713300024251SoilVFDISVGRGGSVSLEKTELDGVLAELRDQALKVTVCSVLNETWYIKDDGIFTGYIASGAELLELKSENKLNIRGIKSLG
Ga0207711_1183434713300025941Switchgrass RhizosphereLKKDKLDDVLDELREQGLRVTLCDALNETWYIKDDGIFTGYIASGAELLDLKSANQLNLRGIQSLG
Ga0207651_1129164523300025960Switchgrass RhizosphereEFDRVLVELRKQGLTVTLHSALNETWYIKGEELYTGYIASAAELLELKAANKLNLRGIKSLG
Ga0207683_1106930613300026121Miscanthus RhizosphereMVSVSDQKASLSNPDFDSVLAELREQGLKVTLHNALNETWFIKGEELYTGYIASVAELLELKAAKGLNIRGIKSLG
Ga0209469_104812533300026307SoilVSLNKNKFDGVLAELREQGLEVTVCRALNETWYIKSDGLFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0209470_1003324143300026324SoilVSLNKNKFDGVLAELREQGLEVTVCIALNETWYIKGDGLFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0209814_1004195133300027873Populus RhizosphereVSLNENKFDGVIAELRDQGLQVTLCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0209814_1018698823300027873Populus RhizosphereMGLEAATPARGEPVSLNKNKFDSVVAELREQGLEVTVCSAVNETWYIKDDGLITCYIASGAELLELKSANRLNIRGIKSLG
Ga0209481_1067050013300027880Populus RhizosphereVSLNENKFDGVVAELRDQGLQVTLCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIRDLG
Ga0209382_1129044623300027909Populus RhizosphereVSLNENKFDGVVAELRDQGLQVTLCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0247682_111043713300028146SoilLLEKTKFDGVLAELREQGLKVTACNVLNETWYVKDDALFTRYIASGAELLKLKSTNKLNIGGIKSLG
Ga0268265_1158902713300028380Switchgrass RhizosphereVSFNENRFEGVVAELREQGLEVTVCSAIDDAWYINDDNRLFSDYIASGNELLALKSANRLNIHGIKSLR
Ga0170834_10243121313300031057Forest SoilVSLKENKFDGLIAELREQGLEVTVFSPLNETWYIKGDAIFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0307497_1076987213300031226SoilMVSVSDQQTLLSNPDFDSVLAEIREQGLKVTLHNALNETWFIKSEELYTGYIASVAELLELKAANELNIRGIKSLG
Ga0307469_1114603023300031720Hardwood Forest SoilVSLNENKFDAAVAELREQGLEVTVCSALNETWYIKGDGLFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0307473_1015144623300031820Hardwood Forest SoilVSLNRNKLDCALAELREQGLEVTVCSALNETWYIKGDGLFTGYIASGAELLELKSAKQLNIRGIKSLG
Ga0307471_10159488623300032180Hardwood Forest SoilVSLNRNKLDCALAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLV
Ga0307472_10120242613300032205Hardwood Forest SoilVSLNENKFDAAVAELREQGLEVTVCSALNETWYIKDDGLFTGYIASGAELLELKSANKLNIRGIKSLG
Ga0335080_1166416313300032828SoilVSLNENRFDGVIAELREQGLEVTVCSPLNETWYIKGDGIFTGYIASGAELLELKSANKLDMSCAVRGVGCRTLT
Ga0373958_0085985_265_4713300034819Rhizosphere SoilVSLKKNKFDDVLAELREQGLQVTLCSALNETWYIKDDGILTGYIASGAELLELKSANKLNIRGIQSLG


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