Basic Information | |
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Family ID | F060734 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 132 |
Average Sequence Length | 48 residues |
Representative Sequence | MSEPGMVLNNPVQIGTREQDLILGVQRGQHELFYELVRPYERRVYAA |
Number of Associated Samples | 119 |
Number of Associated Scaffolds | 132 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 86.36 % |
% of genes near scaffold ends (potentially truncated) | 98.48 % |
% of genes from short scaffolds (< 2000 bps) | 85.61 % |
Associated GOLD sequencing projects | 113 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.53 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (97.727 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.636 % of family members) |
Environment Ontology (ENVO) | Unclassified (27.273 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (57.576 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 34.67% β-sheet: 0.00% Coil/Unstructured: 65.33% | Feature Viewer |
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Powered by Feature Viewer |
Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.53 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 132 Family Scaffolds |
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PF01292 | Ni_hydr_CYTB | 67.42 |
PF00174 | Oxidored_molyb | 12.12 |
PF00033 | Cytochrome_B | 11.36 |
PF03544 | TonB_C | 2.27 |
PF13677 | MotB_plug | 0.76 |
PF13426 | PAS_9 | 0.76 |
PF01618 | MotA_ExbB | 0.76 |
PF13490 | zf-HC2 | 0.76 |
COG ID | Name | Functional Category | % Frequency in 132 Family Scaffolds |
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COG1969 | Ni,Fe-hydrogenase I cytochrome b subunit | Energy production and conversion [C] | 67.42 |
COG2864 | Cytochrome b subunit of formate dehydrogenase | Energy production and conversion [C] | 67.42 |
COG3038 | Cytochrome b561 | Energy production and conversion [C] | 67.42 |
COG3658 | Cytochrome b subunit of Ni2+-dependent hydrogenase | Energy production and conversion [C] | 67.42 |
COG4117 | Thiosulfate reductase cytochrome b subunit | Inorganic ion transport and metabolism [P] | 67.42 |
COG2041 | Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases | Energy production and conversion [C] | 12.12 |
COG3915 | Uncharacterized conserved protein | Function unknown [S] | 12.12 |
COG1290 | Cytochrome b subunit of the bc complex | Energy production and conversion [C] | 11.36 |
COG0810 | Periplasmic protein TonB, links inner and outer membranes | Cell wall/membrane/envelope biogenesis [M] | 2.27 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 97.73 % |
Unclassified | root | N/A | 2.27 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300001471|JGI12712J15308_10067819 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 903 | Open in IMG/M |
3300001593|JGI12635J15846_10180334 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1417 | Open in IMG/M |
3300001593|JGI12635J15846_10666434 | All Organisms → cellular organisms → Bacteria | 601 | Open in IMG/M |
3300003219|JGI26341J46601_10101835 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 837 | Open in IMG/M |
3300003368|JGI26340J50214_10004181 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 4697 | Open in IMG/M |
3300004082|Ga0062384_101232067 | All Organisms → cellular organisms → Bacteria | 545 | Open in IMG/M |
3300004092|Ga0062389_103146625 | All Organisms → cellular organisms → Bacteria | 618 | Open in IMG/M |
3300004152|Ga0062386_100620712 | All Organisms → cellular organisms → Bacteria | 884 | Open in IMG/M |
3300004152|Ga0062386_101534111 | All Organisms → cellular organisms → Bacteria | 555 | Open in IMG/M |
3300005439|Ga0070711_100519111 | All Organisms → cellular organisms → Bacteria | 984 | Open in IMG/M |
3300005450|Ga0066682_10208493 | All Organisms → cellular organisms → Bacteria | 1253 | Open in IMG/M |
3300005467|Ga0070706_100083692 | All Organisms → cellular organisms → Bacteria | 2956 | Open in IMG/M |
3300005568|Ga0066703_10872967 | All Organisms → cellular organisms → Bacteria | 513 | Open in IMG/M |
3300005591|Ga0070761_10873567 | All Organisms → cellular organisms → Bacteria | 568 | Open in IMG/M |
3300005921|Ga0070766_10353006 | All Organisms → cellular organisms → Bacteria | 955 | Open in IMG/M |
3300005921|Ga0070766_10980427 | All Organisms → cellular organisms → Bacteria | 581 | Open in IMG/M |
3300006800|Ga0066660_10289859 | All Organisms → cellular organisms → Bacteria | 1301 | Open in IMG/M |
3300006804|Ga0079221_11218895 | All Organisms → cellular organisms → Bacteria | 586 | Open in IMG/M |
3300006954|Ga0079219_12109817 | All Organisms → cellular organisms → Bacteria | 540 | Open in IMG/M |
3300009088|Ga0099830_10999777 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 693 | Open in IMG/M |
3300009090|Ga0099827_10015032 | All Organisms → cellular organisms → Bacteria | 5179 | Open in IMG/M |
3300009143|Ga0099792_11042649 | All Organisms → cellular organisms → Bacteria | 548 | Open in IMG/M |
3300009520|Ga0116214_1247048 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 677 | Open in IMG/M |
3300009520|Ga0116214_1298516 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 617 | Open in IMG/M |
3300009523|Ga0116221_1032060 | All Organisms → cellular organisms → Bacteria | 2593 | Open in IMG/M |
3300009524|Ga0116225_1448679 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 573 | Open in IMG/M |
3300009618|Ga0116127_1080505 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 880 | Open in IMG/M |
3300009759|Ga0116101_1055416 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 860 | Open in IMG/M |
3300010339|Ga0074046_10011145 | All Organisms → cellular organisms → Bacteria | 6658 | Open in IMG/M |
3300010339|Ga0074046_10506552 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 720 | Open in IMG/M |
3300010358|Ga0126370_11650754 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 615 | Open in IMG/M |
3300012189|Ga0137388_11252572 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 680 | Open in IMG/M |
3300012353|Ga0137367_10931274 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 597 | Open in IMG/M |
3300012354|Ga0137366_10667177 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 743 | Open in IMG/M |
3300012363|Ga0137390_10225932 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1858 | Open in IMG/M |
3300012363|Ga0137390_10558852 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1115 | Open in IMG/M |
3300012927|Ga0137416_11497833 | All Organisms → cellular organisms → Bacteria | 613 | Open in IMG/M |
3300014169|Ga0181531_10452984 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 791 | Open in IMG/M |
3300014200|Ga0181526_10596446 | All Organisms → cellular organisms → Bacteria | 698 | Open in IMG/M |
3300015371|Ga0132258_10751987 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2455 | Open in IMG/M |
3300017927|Ga0187824_10188660 | All Organisms → cellular organisms → Bacteria | 697 | Open in IMG/M |
3300017927|Ga0187824_10389630 | All Organisms → cellular organisms → Bacteria | 506 | Open in IMG/M |
3300017946|Ga0187879_10155812 | All Organisms → cellular organisms → Bacteria | 1291 | Open in IMG/M |
3300017975|Ga0187782_10635958 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 821 | Open in IMG/M |
3300018009|Ga0187884_10004669 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 9924 | Open in IMG/M |
3300018009|Ga0187884_10122835 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1112 | Open in IMG/M |
3300018030|Ga0187869_10460520 | All Organisms → cellular organisms → Bacteria | 605 | Open in IMG/M |
3300018042|Ga0187871_10400868 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 758 | Open in IMG/M |
3300018043|Ga0187887_10186510 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1236 | Open in IMG/M |
3300018058|Ga0187766_10355416 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 960 | Open in IMG/M |
3300018062|Ga0187784_11340200 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 567 | Open in IMG/M |
3300018085|Ga0187772_10462333 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 891 | Open in IMG/M |
3300018086|Ga0187769_10028384 | All Organisms → cellular organisms → Bacteria | 3777 | Open in IMG/M |
3300019256|Ga0181508_1576810 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 800 | Open in IMG/M |
3300020579|Ga0210407_10018558 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis | 5161 | Open in IMG/M |
3300020580|Ga0210403_10237615 | All Organisms → cellular organisms → Bacteria | 1495 | Open in IMG/M |
3300021088|Ga0210404_10565615 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 645 | Open in IMG/M |
3300021170|Ga0210400_10046449 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3378 | Open in IMG/M |
3300021180|Ga0210396_10133723 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2234 | Open in IMG/M |
3300021181|Ga0210388_11169879 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 654 | Open in IMG/M |
3300021402|Ga0210385_11214837 | Not Available | 578 | Open in IMG/M |
3300021406|Ga0210386_10442845 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1122 | Open in IMG/M |
3300021407|Ga0210383_11117470 | Not Available | 665 | Open in IMG/M |
3300021407|Ga0210383_11792191 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 501 | Open in IMG/M |
3300021432|Ga0210384_11033422 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 724 | Open in IMG/M |
3300021474|Ga0210390_10580778 | All Organisms → cellular organisms → Bacteria | 941 | Open in IMG/M |
3300021478|Ga0210402_10545608 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1076 | Open in IMG/M |
3300021861|Ga0213853_10061474 | All Organisms → cellular organisms → Bacteria | 688 | Open in IMG/M |
3300022721|Ga0242666_1064976 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 794 | Open in IMG/M |
3300022731|Ga0224563_1019071 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 600 | Open in IMG/M |
3300023250|Ga0224544_1017796 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 976 | Open in IMG/M |
3300025320|Ga0209171_10218468 | All Organisms → cellular organisms → Bacteria | 1063 | Open in IMG/M |
3300025414|Ga0208935_1004287 | All Organisms → cellular organisms → Bacteria | 2076 | Open in IMG/M |
3300025928|Ga0207700_10528827 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1045 | Open in IMG/M |
3300025939|Ga0207665_10695903 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 799 | Open in IMG/M |
3300025949|Ga0207667_10364390 | All Organisms → cellular organisms → Bacteria | 1474 | Open in IMG/M |
3300027073|Ga0208366_1001362 | All Organisms → cellular organisms → Bacteria | 1973 | Open in IMG/M |
3300027297|Ga0208241_1059422 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 610 | Open in IMG/M |
3300027497|Ga0208199_1010658 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2152 | Open in IMG/M |
3300027497|Ga0208199_1028235 | All Organisms → cellular organisms → Bacteria | 1233 | Open in IMG/M |
3300027537|Ga0209419_1094361 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 594 | Open in IMG/M |
3300027545|Ga0209008_1099495 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 650 | Open in IMG/M |
3300027562|Ga0209735_1024548 | All Organisms → cellular organisms → Bacteria | 1246 | Open in IMG/M |
3300027619|Ga0209330_1000647 | All Organisms → cellular organisms → Bacteria | 13119 | Open in IMG/M |
3300027635|Ga0209625_1149428 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 522 | Open in IMG/M |
3300027684|Ga0209626_1021616 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1538 | Open in IMG/M |
3300027692|Ga0209530_1070742 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1006 | Open in IMG/M |
3300027768|Ga0209772_10030740 | All Organisms → cellular organisms → Bacteria | 1557 | Open in IMG/M |
3300027842|Ga0209580_10651526 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 521 | Open in IMG/M |
3300027853|Ga0209274_10315967 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 803 | Open in IMG/M |
3300027867|Ga0209167_10284531 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 892 | Open in IMG/M |
3300027898|Ga0209067_10066635 | All Organisms → cellular organisms → Bacteria | 1843 | Open in IMG/M |
3300027903|Ga0209488_10050268 | All Organisms → cellular organisms → Bacteria | 3066 | Open in IMG/M |
3300027903|Ga0209488_10254128 | All Organisms → cellular organisms → Bacteria | 1317 | Open in IMG/M |
3300027911|Ga0209698_10020355 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis | 6310 | Open in IMG/M |
3300027986|Ga0209168_10592432 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 531 | Open in IMG/M |
3300028020|Ga0265351_1013915 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 683 | Open in IMG/M |
3300028036|Ga0265355_1024261 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 531 | Open in IMG/M |
3300028047|Ga0209526_10294722 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1099 | Open in IMG/M |
3300028748|Ga0302156_10497622 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 519 | Open in IMG/M |
3300028759|Ga0302224_10252984 | All Organisms → cellular organisms → Bacteria | 703 | Open in IMG/M |
3300029636|Ga0222749_10320094 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 806 | Open in IMG/M |
3300029917|Ga0311326_10007063 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis | 7231 | Open in IMG/M |
3300029952|Ga0311346_10970301 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 690 | Open in IMG/M |
3300030007|Ga0311338_10726907 | All Organisms → cellular organisms → Bacteria | 1000 | Open in IMG/M |
3300030042|Ga0302300_1059278 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1219 | Open in IMG/M |
3300030044|Ga0302281_10253209 | All Organisms → cellular organisms → Bacteria | 717 | Open in IMG/M |
3300030399|Ga0311353_10808647 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 799 | Open in IMG/M |
3300030524|Ga0311357_11721277 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 524 | Open in IMG/M |
3300030618|Ga0311354_11665683 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 559 | Open in IMG/M |
3300030646|Ga0302316_10093490 | All Organisms → cellular organisms → Bacteria | 1287 | Open in IMG/M |
3300030813|Ga0265750_1041188 | Not Available | 671 | Open in IMG/M |
3300030842|Ga0075404_10699477 | All Organisms → cellular organisms → Bacteria | 785 | Open in IMG/M |
3300030848|Ga0075388_11469399 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 603 | Open in IMG/M |
3300031233|Ga0302307_10231964 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 949 | Open in IMG/M |
3300031474|Ga0170818_106599698 | All Organisms → cellular organisms → Bacteria | 510 | Open in IMG/M |
3300031573|Ga0310915_10529013 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 837 | Open in IMG/M |
3300031708|Ga0310686_108741142 | All Organisms → cellular organisms → Bacteria | 1889 | Open in IMG/M |
3300031708|Ga0310686_111291524 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 724 | Open in IMG/M |
3300031715|Ga0307476_10928280 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 642 | Open in IMG/M |
3300031718|Ga0307474_10097468 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2197 | Open in IMG/M |
3300031718|Ga0307474_10476113 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 977 | Open in IMG/M |
3300031753|Ga0307477_10489666 | All Organisms → cellular organisms → Bacteria | 837 | Open in IMG/M |
3300031754|Ga0307475_10266210 | All Organisms → cellular organisms → Bacteria | 1374 | Open in IMG/M |
3300031823|Ga0307478_11539322 | All Organisms → cellular organisms → Bacteria | 550 | Open in IMG/M |
3300031912|Ga0306921_10478049 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1450 | Open in IMG/M |
3300031954|Ga0306926_10226658 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2319 | Open in IMG/M |
3300032001|Ga0306922_10435050 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1403 | Open in IMG/M |
3300032174|Ga0307470_10091788 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1711 | Open in IMG/M |
3300032893|Ga0335069_11352935 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 772 | Open in IMG/M |
3300034163|Ga0370515_0305026 | All Organisms → cellular organisms → Bacteria | 673 | Open in IMG/M |
3300034282|Ga0370492_0067154 | All Organisms → cellular organisms → Bacteria | 1469 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 13.64% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 9.85% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 8.33% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 6.06% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 5.30% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 5.30% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 5.30% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 4.55% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.79% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 3.79% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 3.03% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.03% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 2.27% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 2.27% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.27% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.27% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 2.27% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 1.52% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 1.52% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.52% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.52% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 1.52% |
Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 1.52% |
Watersheds | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds | 0.76% |
Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 0.76% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.76% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.76% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.76% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.76% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.76% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.76% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.76% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.76% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001471 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 | Environmental | Open in IMG/M |
3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
3300003219 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 | Environmental | Open in IMG/M |
3300003368 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 | Environmental | Open in IMG/M |
3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004152 | Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3 | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005450 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005568 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 | Environmental | Open in IMG/M |
3300005591 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 | Environmental | Open in IMG/M |
3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
3300006800 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300009520 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG | Environmental | Open in IMG/M |
3300009523 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG | Environmental | Open in IMG/M |
3300009524 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG | Environmental | Open in IMG/M |
3300009618 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 | Environmental | Open in IMG/M |
3300009759 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10 | Environmental | Open in IMG/M |
3300010339 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3 | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
3300012353 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG | Environmental | Open in IMG/M |
3300012354 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300014169 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG | Environmental | Open in IMG/M |
3300014200 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300017927 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4 | Environmental | Open in IMG/M |
3300017946 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10 | Environmental | Open in IMG/M |
3300017975 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018009 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40 | Environmental | Open in IMG/M |
3300018030 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100 | Environmental | Open in IMG/M |
3300018042 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10 | Environmental | Open in IMG/M |
3300018043 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10 | Environmental | Open in IMG/M |
3300018058 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG | Environmental | Open in IMG/M |
3300018062 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018085 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018086 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG | Environmental | Open in IMG/M |
3300019256 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
3300021402 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O | Environmental | Open in IMG/M |
3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300021861 | Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022721 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022731 | Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4 | Environmental | Open in IMG/M |
3300023250 | Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14 | Environmental | Open in IMG/M |
3300025320 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025414 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes) | Environmental | Open in IMG/M |
3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027073 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes) | Environmental | Open in IMG/M |
3300027297 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes) | Environmental | Open in IMG/M |
3300027497 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes) | Environmental | Open in IMG/M |
3300027537 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027545 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027562 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027619 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027635 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027684 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027692 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027768 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes) | Environmental | Open in IMG/M |
3300027842 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027853 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes) | Environmental | Open in IMG/M |
3300027867 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027898 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes) | Environmental | Open in IMG/M |
3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300027986 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300028020 | Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4 | Environmental | Open in IMG/M |
3300028036 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 | Host-Associated | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028748 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2 | Environmental | Open in IMG/M |
3300028759 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1 | Environmental | Open in IMG/M |
3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300029917 | I_Bog_E1 coassembly | Environmental | Open in IMG/M |
3300029952 | II_Bog_N3 coassembly | Environmental | Open in IMG/M |
3300030007 | I_Palsa_E1 coassembly | Environmental | Open in IMG/M |
3300030042 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1 | Environmental | Open in IMG/M |
3300030044 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2 | Environmental | Open in IMG/M |
3300030399 | II_Palsa_E2 coassembly | Environmental | Open in IMG/M |
3300030524 | II_Palsa_N3 coassembly | Environmental | Open in IMG/M |
3300030618 | II_Palsa_E3 coassembly | Environmental | Open in IMG/M |
3300030646 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2 | Environmental | Open in IMG/M |
3300030813 | Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030842 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030848 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031233 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2 | Environmental | Open in IMG/M |
3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031573 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111 | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032893 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1 | Environmental | Open in IMG/M |
3300034163 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14 | Environmental | Open in IMG/M |
3300034282 | Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12712J15308_100678191 | 3300001471 | Forest Soil | MSEANVVLHNPDQAGTTRERDLIARVQRGQNELFYELVRPYERR |
JGI12635J15846_101803341 | 3300001593 | Forest Soil | MAETNIVLNNPEQARGAREQELILSVQRGQSELFYELVR |
JGI12635J15846_106664342 | 3300001593 | Forest Soil | MPNAKMELNTALDNPVQSGTRERDLISSVQGGQRELFYELVQPYERRVYAAALAILRNVHDA |
JGI26341J46601_101018352 | 3300003219 | Bog Forest Soil | MSEAKMALNNSGQAGGTREQDLILSVQRGQHELFYELVRPYERRVYAAALAIL |
JGI26340J50214_100041811 | 3300003368 | Bog Forest Soil | MAEPSVVLNNPGQAPPTREQDLIARVQRGQNELFYELVRPYERRVCGGAGD |
Ga0062384_1012320672 | 3300004082 | Bog Forest Soil | MSEPRMALNNPVQMSVREQELILRLQRGQHELFYELVRPYERRVYAAALAILRNEQDA |
Ga0062389_1031466252 | 3300004092 | Bog Forest Soil | MTLNNPTQSTGREQDLILQVQRGERELFYELVRPYERRVYAAALAILR |
Ga0062386_1006207122 | 3300004152 | Bog Forest Soil | MADLNVVLDNPGQSGTTREQELIQRVQRGENELFYELVRPYE |
Ga0062386_1015341112 | 3300004152 | Bog Forest Soil | MAEANPVLDNPGRVGAREQELIERLQRGQNELFYELVRPYERRVYAAAL |
Ga0070711_1005191111 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MAEPNVMLNNPAPAGMTREQDLIARVQRGESELFYELVRPYE |
Ga0066682_102084933 | 3300005450 | Soil | MPEPNLVLENSPLAAMTREQQLIASVQQGRRELFYELVRPYERRV |
Ga0070706_1000836921 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSNIPAVNNPGDAVGTREQHLISQVQRGQHELFYELVRPYERRVY |
Ga0066703_108729672 | 3300005568 | Soil | MAEANVVVNNSVQAGTSHELELIDRVQRGENSLFYELVRPYERRVFAA |
Ga0070761_108735671 | 3300005591 | Soil | MSEPSIVLNNPGPTGGTREQDLILSVQRGQHELFYELVRPYERRVYAA |
Ga0070766_103530061 | 3300005921 | Soil | MTLNNPGQAGTREQDLILHVQRGQNELFYELVRPYERRVYAAALAILRNEQDA |
Ga0070766_109804272 | 3300005921 | Soil | MSEPSMTLNNPTQAGPREQDLILHVQRGQHELFYELVRPYERRVYAAAL |
Ga0066660_102898591 | 3300006800 | Soil | MSESHSVLNNPEAAVSEREQDLIARVQRGQRELFYELVQPYERRV* |
Ga0079221_112188951 | 3300006804 | Agricultural Soil | MAEVNAVLSNPEQGSTHEQELISQVQRGHTELFYELVRPYERRVYAAALAILRN |
Ga0079219_121098171 | 3300006954 | Agricultural Soil | MAEADVVYNAGVGDTTHEQDLIARVQRGDTALFYELVRPYERRVYA |
Ga0099830_109997771 | 3300009088 | Vadose Zone Soil | MSEPVTVLNNPVQIATREQDLIQSVQRGQNELFYELVRPYERRVYAAALAI |
Ga0099827_100150327 | 3300009090 | Vadose Zone Soil | MVLNTSVDNPVQTGARERDLIASVQGGQNELFYELVRPY |
Ga0099792_110426492 | 3300009143 | Vadose Zone Soil | MTSNIPAVNNPGEAVGTREQDLISQVQRGQHELFYELVRPYERRVYAAALAILRNEA |
Ga0116214_12470481 | 3300009520 | Peatlands Soil | MAEADMVLNNPGPAGTTREQDLIARVQRGQNELFYELVQPYERRV |
Ga0116214_12985161 | 3300009520 | Peatlands Soil | MSEPGMVLNNSRQAGTREQDLILSVQRGQHELFYELVRAYERRVYAAALA |
Ga0116221_10320604 | 3300009523 | Peatlands Soil | MAEPNVILNNPAQEGTTREQDLIARVQRGQNELFYELVRPYERRVYAAALAILRNE |
Ga0116225_14486791 | 3300009524 | Peatlands Soil | MALNAVVNNPEQAPLPREQDLIARVQRGQNELFYELVRPYERRVYAAAL |
Ga0116127_10805051 | 3300009618 | Peatland | MSEPGMVLNSPAQAGGTREQDLILNVQRGQHELFYELVRPYERRV |
Ga0116101_10554161 | 3300009759 | Peatland | MSDPEMVLNNPRQAGDARELELISNVQGGQHELFYELVRPYERRVYAAALAI |
Ga0074046_100111451 | 3300010339 | Bog Forest Soil | MAEPSVVLNNPGQAPPTREQDLIARVQRGQNELFYELVRPYERRVYAAALAILRNETDA |
Ga0074046_105065521 | 3300010339 | Bog Forest Soil | MALNAVVNNPGQAGTPREQDLIARVQRGQNELFYELVRPYERRVYAAALAILRNETDA |
Ga0126370_116507541 | 3300010358 | Tropical Forest Soil | MAELKAVLNNPESAVGTREQDLIARVQRGENELFYELVRPYERRV |
Ga0137388_112525721 | 3300012189 | Vadose Zone Soil | MSEPEMVLNNPVQIATREQDLVQSVQRGQHELFYELVRPYERRVYA |
Ga0137367_109312741 | 3300012353 | Vadose Zone Soil | MAEPKITLHNPDPAATTREQDLIARVQRGETELFYELVKP |
Ga0137366_106671771 | 3300012354 | Vadose Zone Soil | MAEPNVVLNNPDQAGATREQELIARVQRGGNELFYE |
Ga0137390_102259321 | 3300012363 | Vadose Zone Soil | MTSNIPAVNNPGDAVGTREQHLISQVQRGQHELFYELVRPYER |
Ga0137390_105588522 | 3300012363 | Vadose Zone Soil | MTSNIPAVNNPGEAVGTREQHLISQVQRGQHELFYELVRP |
Ga0137416_114978331 | 3300012927 | Vadose Zone Soil | MPEPNLVLENSPPAATTREQQLIASVQQGKRELFYELVRPYERRIYAAALAILRN |
Ga0181531_104529841 | 3300014169 | Bog | MALNALVNNPEQAGTTREQDLIARVQRGQNELFYELVRPYERRVYAAALAI |
Ga0181526_105964463 | 3300014200 | Bog | MALNALVNNPEQAGTTREQDLIARVQRGQNELFYELVRPYERRVYAAALAILR |
Ga0132258_107519871 | 3300015371 | Arabidopsis Rhizosphere | MAELNVVLNNPDQVATREQELIAQVQRGHSELFYDLVRPYERRVYAAALAI |
Ga0187824_101886602 | 3300017927 | Freshwater Sediment | MAEPNAVLSNPEQAATREQELIARVQRGENELFYELVRPYERRVYAAALAILRNE |
Ga0187824_103896301 | 3300017927 | Freshwater Sediment | MAERNVVLSNPAMSREEELIAQVQHGHNELFYELVRPYERRVYAAALAILRNESDA |
Ga0187879_101558123 | 3300017946 | Peatland | MSDPEMVLNNPRQAGDARELELISNVQGGQHELFYELV |
Ga0187782_106359582 | 3300017975 | Tropical Peatland | VSNSEQTSDTREHDLILSVQRGQHELFYELVRPYEKRVY |
Ga0187884_1000466910 | 3300018009 | Peatland | MSEAKMALNNPGQAGGTREQDLILSVQRGQHELFYELVRPYERRVYAAALAILRNEQ |
Ga0187884_101228351 | 3300018009 | Peatland | MSEPEIALHNPAQTGLRERDLILSVQRGQHELFYELVRPYERRVY |
Ga0187869_104605201 | 3300018030 | Peatland | MSEAKMALNNPGQAGGTREQDLILSVQRGQHELFYELVRPYERRVYAAALAILRN |
Ga0187871_104008682 | 3300018042 | Peatland | MSDPEMVLNNPRQAGDARELELISNVQGGQHELFYELVRPYERRVY |
Ga0187887_101865103 | 3300018043 | Peatland | MSEAKTALNNPGQAGGTREQDLILRVQRGQQELFYELVRPYERRVYAAALAILRNE |
Ga0187766_103554162 | 3300018058 | Tropical Peatland | MAERNVAFDNPGQAGTTAEQDLIARVQRGQNELFYELVRPYERRVYAAALAI |
Ga0187784_113402001 | 3300018062 | Tropical Peatland | MAERNVVLNNPGQGTTREQDLIARVQGGHSELFYELVRPYERRVY |
Ga0187772_104623331 | 3300018085 | Tropical Peatland | MAELNLILNNPEPGMTREQELIAQVQRGHNELFYELVKPYERRVYAAALAI |
Ga0187769_100283845 | 3300018086 | Tropical Peatland | MSEAGIVSTSPGQTGNRREHDLILSVQRGQHELFYELVEPYEKRVYAAALAILRNQ |
Ga0181508_15768102 | 3300019256 | Peatland | MAEPNLVLNNPGSDTAREQDVIARVQRGQTDLFYELVRPYERRVY |
Ga0210407_100185581 | 3300020579 | Soil | MSEPIVAMNNSVQAGGVREQDLISSVQRGQHELFYELVRPYERRVYAAALAILRNEH |
Ga0210403_102376151 | 3300020580 | Soil | MVLNNPVQIATREQELIQSVQRGQSELFYELVRPYERRVYAAALAILRNEHDAE |
Ga0210404_105656152 | 3300021088 | Soil | MSEPGMVLNNPVQIGTREQDLILGVQRGQHELFYELVRPYERRVYAA |
Ga0210400_100464495 | 3300021170 | Soil | MSEPEMVLNNPVQIATREQDLISSVQRGQHELFYELVRPYERRVYAAALAILR |
Ga0210396_101337231 | 3300021180 | Soil | MAEPNVVLNNSGLKSPAQGSTTREQDLISRVQRGQNELFYELVRPYE |
Ga0210388_111698791 | 3300021181 | Soil | MSEPGVVLNNPVQVGTREQDLILGVQRGQHELFYELVRPYERRVYAAALAILR |
Ga0210385_112148371 | 3300021402 | Soil | MPEPNAVLNNPEQAGRSREEELIARVQQGQKELFYELVRPYERRVFAAALT |
Ga0210386_104428453 | 3300021406 | Soil | MVLSDVVNNPGQAGGTHEQDLILSVQQGQHELFYELVRPYERRVY |
Ga0210383_111174701 | 3300021407 | Soil | MAERNAVVNNPEQAGATREQDLIARVQRGQNELFYELVRPYERRVYA |
Ga0210383_117921912 | 3300021407 | Soil | MAEPNLVLNNPGSDTTREQDLIARVQHGQTELFYELVRPYER |
Ga0210384_110334222 | 3300021432 | Soil | MSEPEMVLNNPAQIATREQDLISSVQRGQHELFYELVRP |
Ga0210390_105807781 | 3300021474 | Soil | MTLNNPGQAGTREQDLILHVQRGQNELFYELVRPYERRVYAAALAILRNEQDAED |
Ga0210402_105456081 | 3300021478 | Soil | MAEANVVLNNPELAGTTREQDLIARVQRGHSEDFYELVKPHERRVYAAALAILR |
Ga0213853_100614742 | 3300021861 | Watersheds | MAEADMVLNNPGTTREQDLIARVQRGQNELFYELVQPYERRVYAAALAILRNET |
Ga0242666_10649762 | 3300022721 | Soil | MSEPSVALNNSEAGTRELQLISSVQQGQHELFYELVQPYERRVYAAAFAIL |
Ga0224563_10190711 | 3300022731 | Soil | MSESNVLMNNPELAGDTSEQDLIARVQRGHHELFYELVRPYERRVY |
Ga0224544_10177962 | 3300023250 | Soil | MSEPSMTLNNPGQSGSMREQDLILHVQRGERELFYELVRPYERRVYAAAL |
Ga0209171_102184681 | 3300025320 | Iron-Sulfur Acid Spring | MSEPSLTLNNPTLAGARERDLILHVQRGQHELFYELVRPYERRVYAAALAILRNEQDAE |
Ga0208935_10042873 | 3300025414 | Peatland | MTLNNPTHDATREQDLILQVQRGQSELFYELVRPYERRVYAAALAILRNEQDAEDA |
Ga0207700_105288273 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | MAEPKFALHNPDPAGTTREQDLIAQVQHGHNELFYELVGPYERRVY |
Ga0207665_106959032 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MAQLNVVLSNPEQGTTREQELIAQVQRGQTGLFYELVCPYERRVYAAALAILRNPTDAE |
Ga0207667_103643903 | 3300025949 | Corn Rhizosphere | MAEANVVLNNPMQPASREQELIGRVQRGENELFYELVKPYERRVYAAALAILRNDA |
Ga0208366_10013621 | 3300027073 | Forest Soil | MAELNVVLSNPEQGTTREQHLIAQVQRGQAELFYELVRPYERRVYAAALAILRNE |
Ga0208241_10594221 | 3300027297 | Forest Soil | MSEPGMVLNNPVQIGTREQDLILGVQRGQHELFYELVRPYERRVYAAALAILRNEHDAE |
Ga0208199_10106584 | 3300027497 | Peatlands Soil | MAEPDIAFNNPAPAGTTAEQDLIARVQRGQNELFYELVRPYERRVYA |
Ga0208199_10282353 | 3300027497 | Peatlands Soil | MSEPDMVLINPEQTQPAREQDLILNVQRGKNELFYELVRPYERRVYAAALAILRNEQDAE |
Ga0209419_10943613 | 3300027537 | Forest Soil | MPEPNLVLENSPGAATTREQQLIASVQQGKGELFYELVRPYERR |
Ga0209008_10994951 | 3300027545 | Forest Soil | MVLSDVVNNPGQAGDTREQDLILSVQQGQHELFYELVRPY |
Ga0209735_10245483 | 3300027562 | Forest Soil | MVLNTTVDNLAQTSSREHDLISRVQDGQRELFYELVRPYERR |
Ga0209330_10006471 | 3300027619 | Forest Soil | MVLSDVVNNPRQAGGTREQDLILSVQQGQHELFYELVRPYER |
Ga0209625_11494282 | 3300027635 | Forest Soil | MVLSDVVNNPGQAGGTREQDLILSVQQGQHELFYDLVRPYERRVY |
Ga0209626_10216163 | 3300027684 | Forest Soil | MSEANAVLHNPDQAGTTRERDLIARVQRGQNELFYELVRPYERR |
Ga0209530_10707421 | 3300027692 | Forest Soil | VLNNPEQARGAREQELILSVQRGQSELFYELVRPYEK |
Ga0209772_100307403 | 3300027768 | Bog Forest Soil | MSEPDMVLINPEQTRPTREQDLILNVQRGQNELFYELVRPYERRVFAAALAILRNEQDAE |
Ga0209580_106515262 | 3300027842 | Surface Soil | MAELNVVVDNPGPETNREQDLIAQVQRGHHELFYELVRPYERRVYAAAMAILR |
Ga0209274_103159671 | 3300027853 | Soil | MSEPSIVLNNPGPTGGTREQDLILSVQRGQHELFYELVRPYERRVYAAALAILR |
Ga0209167_102845311 | 3300027867 | Surface Soil | MVSNIAVGNPEQAGGTRERELISAVQRGQSELFYELVRPYEGRVYAA |
Ga0209067_100666351 | 3300027898 | Watersheds | MRGKMAELKVVLNNPEPVTDANERDLIARVQRGENELFYELVRPYER |
Ga0209488_100502684 | 3300027903 | Vadose Zone Soil | MVLNTTVENPEQAGRRELDLISSVQGGEHELFYELVRPYERRVYAAA |
Ga0209488_102541281 | 3300027903 | Vadose Zone Soil | MVLNTTVENPEQAGRRERDLISSVQGGEHELFYELVRPYE |
Ga0209698_100203551 | 3300027911 | Watersheds | MAEQNVVLNNPEQGMTREQELIALVQRGQNELFYELVRPYE |
Ga0209168_105924322 | 3300027986 | Surface Soil | MSETDMVLNNPEASVGGRREQDLILSVQRGHNELFYELVRPYER |
Ga0265351_10139151 | 3300028020 | Soil | MSEPEMVLNNPVQSATREQELIQSVQRGQSELFYELVRPYERRVYAAALAILRNEH |
Ga0265355_10242611 | 3300028036 | Rhizosphere | MVSNSAVDNPEQAGDTRERDLIANVQSGKHELFYELVRPYEKRVYAAALAILR |
Ga0209526_102947223 | 3300028047 | Forest Soil | MSEANVALHNPEQGATTREQDLIARVQRGQNELFYELVR |
Ga0302156_104976221 | 3300028748 | Bog | MVLNSPADNPVQVPTREQQLIQSVQSGQSELFYELVRPY |
Ga0302224_102529842 | 3300028759 | Palsa | MTLTNPTHDAAREQDLILQVQRGQSELFYELVRPYERRVYAAALAILRN |
Ga0222749_103200941 | 3300029636 | Soil | MVLGDVVNNPVQMGAREQGLILSVQRGQHELFYELVRPYERRVYAAALAIL |
Ga0311326_100070631 | 3300029917 | Bog | MVLNPPADNPVQTTTREQQLIQSVQSGQSELFYELVRPYERRVYAAALAILRNEH |
Ga0311346_109703011 | 3300029952 | Bog | MTLNNPTHDATREQDLILQVQRGQSELFYELVRPYERRV |
Ga0311338_107269072 | 3300030007 | Palsa | MSIPGTVLNNPEQTGARERDLISEVQRGQHELFYELVRPYERRVFAAALAILRNEQDA |
Ga0302300_10592781 | 3300030042 | Palsa | MTLTNPTHDAAREQDLILQVQRGQSELFYELVRPYERRVY |
Ga0302281_102532091 | 3300030044 | Fen | LNTSIDNSEQAGGARERELILSVQNGQQELFYELVRPYERRVYAAAMAILRNEQDAEDA |
Ga0311353_108086472 | 3300030399 | Palsa | MVLHNPGQSAAREQDLILSVQRGQNELFYELVRPYERRVYAAALAILHN |
Ga0311357_117212771 | 3300030524 | Palsa | MVLHNPGQSAAREQDLILSVQRGQNELFYELVRPYERRVYAAALA |
Ga0311354_116656832 | 3300030618 | Palsa | MSIPGTVLNNPEQTGARERDLISEVQRGQHELFYELVRPY |
Ga0302316_100934901 | 3300030646 | Palsa | MSQPSIVLNNSEQAVGARERDLISAVQRGQSELFYELVRPYER |
Ga0265750_10411881 | 3300030813 | Soil | MSEPEMVLNNPIAAGVAREHELIASVQRGQHELFYELVRPYER |
Ga0075404_106994772 | 3300030842 | Soil | MPNAGMVLNTAVDNPVQAGRRERDLIASVQGGQSELFYELVRPYERRVYAAALAILQGDGHYSYMAVG |
Ga0075388_114693992 | 3300030848 | Soil | MPNAGMVLNTAVDNPVQAGRRERDLIASVQGGQSELFYELVRPYERRVYAAALAI |
Ga0302307_102319641 | 3300031233 | Palsa | MVLTDSVNDPEQASGKRERELIASVQGGQRELFYELVRPYERRVYAAA |
Ga0170818_1065996981 | 3300031474 | Forest Soil | MAEPKVVLDKPDQLEMTREQDLIARVQRGQNELFYELVRPYERRVYAAALAILRNETDA |
Ga0310915_105290131 | 3300031573 | Soil | MAEPNVVLNNPAETTREQELIAAVQRGQTELFYELVRPYE |
Ga0310686_1087411423 | 3300031708 | Soil | MVTTNPQEAATREQNLIASVQRGQSDLFYELVRPYER |
Ga0310686_1112915242 | 3300031708 | Soil | MVVAIDNSSQEQDLILRVQRGERELFYELVRPYERRVYAAALAILRN |
Ga0307476_109282801 | 3300031715 | Hardwood Forest Soil | MSEANILLHNPEQAGATRERDLIARVQRGQNELFYELVRPY |
Ga0307474_100974684 | 3300031718 | Hardwood Forest Soil | MSEANAVLHNPDQAGTTRERDLIARVQRGQNELFYELVRPYERRVYAAALA |
Ga0307474_104761131 | 3300031718 | Hardwood Forest Soil | MAELNVVLSNPEQGTTREQELIAQVQRGQTGLFYELVRPYERRVYAAALAI |
Ga0307477_104896662 | 3300031753 | Hardwood Forest Soil | MSEPITTLNNPAQGSMREQDLILHVQRGQHELFYELVRPYERRVYAAALAILRNE |
Ga0307475_102662103 | 3300031754 | Hardwood Forest Soil | MPETDMVLNNPARAGGTREQELIARVQRGENELFYELVRPYE |
Ga0307478_115393222 | 3300031823 | Hardwood Forest Soil | MVEANVMLNNPEQAGTTREQDLIARVQRGQNELFYELVRPYERRVYAAALAILRNP |
Ga0306921_104780493 | 3300031912 | Soil | MAELNVVLTNPEQGSTREQELIAHVQRGQTEHFYELVRPYERRVYA |
Ga0306926_102266581 | 3300031954 | Soil | MAEPNVVLNNPAETTREQELIAAVQRGQTELFYELVRPYEKRVYA |
Ga0306922_104350503 | 3300032001 | Soil | MAELNVVLSNPEPGSTREQELLAEVQRGQTELFYELVRPYERRVYAAAMAILR |
Ga0307470_100917881 | 3300032174 | Hardwood Forest Soil | MAELNVVLSNPEQGAAREQELISQVQRGQTEFFYELVRPYERRVYAAALAILRNDTD |
Ga0335069_113529352 | 3300032893 | Soil | MAELNVVVSNPEPYSTREQELVASVQRGQTELFYELVR |
Ga0370515_0305026_3_170 | 3300034163 | Untreated Peat Soil | MSEPGLVLDNSGQAVGTREQQLILSVQQGQPELFYELVKPYERRVYAAALAILRNE |
Ga0370492_0067154_3_164 | 3300034282 | Untreated Peat Soil | MAEPNMILSNAEQAGQTREQDLIARVQRGQSELFYELVRPYERRVFAAALAILR |
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