Metagenome / Metatranscriptome Family F060723

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060723
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	45 residues
Representative Sequence	MDEVTHKQIYERLLAVESKVDEIDKNTKGLVEAIKALDGAF
Number of Associated Samples	85
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.47 %
% of genes near scaffold ends (potentially truncated)	96.97 %
% of genes from short scaffolds (< 2000 bps)	78.03 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (38.636 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (28.030 % of family members)
Environment Ontology (ENVO)	Unclassified (71.970 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (73.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.72% β-sheet: 0.00% Coil/Unstructured: 49.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF16778	Phage_tail_APC	20.45
PF13884	Peptidase_S74	7.58
PF13392	HNH_3	1.52
PF07460	NUMOD3	0.76
PF07484	Collar	0.76
PF13385	Laminin_G_3	0.76
PF03819	MazG	0.76
PF06739	SBBP	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.36 %
Unclassified	root	N/A	38.64 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	45.45 %
Unclassified	root	N/A	38.64 %
cellular organisms	root	All Organisms → cellular organisms	15.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	24.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	15.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	24.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.03 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.52 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	24.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.21 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.03 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.52 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	24.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.21 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	3.03 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.52 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	21.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.21 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	3.03 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.52 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.76 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.21 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	3.03 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.52 %
Quisquiliibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium	0.76 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.21 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	3.03 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	0.76 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	0.76 %
Quisquiliibacterium transsilvanicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	0.76 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.21 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	3.03 %
Flavobacteriales bacterium TMED228	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	0.76 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	0.76 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	0.76 %
Quisquiliibacterium transsilvanicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.21 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	3.03 %
Crocinitomicaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	0.76 %
Flavobacteriales bacterium TMED228	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	0.76 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	0.76 %
Quisquiliibacterium transsilvanicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002447\|JGI24768J34885_10167488	Not Available	743	Open in IMG/M
3300003804\|Ga0007817_1001841	Not Available	1747	Open in IMG/M
3300003812\|Ga0007861_1017006	Not Available	630	Open in IMG/M
3300004096\|Ga0066177_10287076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	695	Open in IMG/M
3300004124\|Ga0066178_10008021	All Organisms → Viruses → Predicted Viral	2145	Open in IMG/M
3300004240\|Ga0007787_10703563	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505	Open in IMG/M
3300004686\|Ga0065173_1088160	Not Available	558	Open in IMG/M
3300004686\|Ga0065173_1093868	Not Available	539	Open in IMG/M
3300004763\|Ga0007746_1338058	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300004796\|Ga0007763_11340182	Not Available	587	Open in IMG/M
3300005581\|Ga0049081_10014821	All Organisms → cellular organisms → Bacteria → Proteobacteria	2949	Open in IMG/M
3300005582\|Ga0049080_10039152	All Organisms → Viruses → Predicted Viral	1647	Open in IMG/M
3300005582\|Ga0049080_10220663	Not Available	623	Open in IMG/M
3300005662\|Ga0078894_10521336	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1065	Open in IMG/M
3300005805\|Ga0079957_1077811	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1889	Open in IMG/M
3300006033\|Ga0075012_10531912	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300006118\|Ga0007859_1023724	Not Available	1341	Open in IMG/M
3300006802\|Ga0070749_10095324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1764	Open in IMG/M
3300006802\|Ga0070749_10690855	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300006920\|Ga0070748_1196645	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300007548\|Ga0102877_1155286	Not Available	647	Open in IMG/M
3300007708\|Ga0102859_1010153	All Organisms → Viruses → Predicted Viral	2320	Open in IMG/M
3300008119\|Ga0114354_1184706	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	741	Open in IMG/M
3300008259\|Ga0114841_1224739	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	647	Open in IMG/M
3300008266\|Ga0114363_1024825	All Organisms → Viruses → Predicted Viral	2595	Open in IMG/M
3300008266\|Ga0114363_1047833	All Organisms → Viruses → Predicted Viral	1716	Open in IMG/M
3300008266\|Ga0114363_1227314	Not Available	547	Open in IMG/M
3300008448\|Ga0114876_1158838	Not Available	814	Open in IMG/M
3300008448\|Ga0114876_1218149	Not Available	626	Open in IMG/M
3300008450\|Ga0114880_1018003	All Organisms → cellular organisms → Bacteria → Proteobacteria	3330	Open in IMG/M
3300008450\|Ga0114880_1031644	All Organisms → Viruses → Predicted Viral	2359	Open in IMG/M
3300008450\|Ga0114880_1112497	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1034	Open in IMG/M
3300008450\|Ga0114880_1187650	Not Available	707	Open in IMG/M
3300008450\|Ga0114880_1190589	Not Available	698	Open in IMG/M
3300008450\|Ga0114880_1222697	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	612	Open in IMG/M
3300008450\|Ga0114880_1222892	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	612	Open in IMG/M
3300009068\|Ga0114973_10060036	All Organisms → Viruses → Predicted Viral	2222	Open in IMG/M
3300009154\|Ga0114963_10345037	Not Available	819	Open in IMG/M
3300009155\|Ga0114968_10000480	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	30028	Open in IMG/M
3300009155\|Ga0114968_10080180	All Organisms → Viruses → Predicted Viral	2030	Open in IMG/M
3300009155\|Ga0114968_10121508	Not Available	1576	Open in IMG/M
3300009155\|Ga0114968_10557386	Not Available	610	Open in IMG/M
3300009155\|Ga0114968_10700718	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	530	Open in IMG/M
3300009160\|Ga0114981_10177785	Not Available	1170	Open in IMG/M
3300009180\|Ga0114979_10390340	Not Available	816	Open in IMG/M
3300009181\|Ga0114969_10104105	Not Available	1825	Open in IMG/M
3300009183\|Ga0114974_10620183	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300009184\|Ga0114976_10505263	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	622	Open in IMG/M
3300009184\|Ga0114976_10634907	Not Available	540	Open in IMG/M
3300010157\|Ga0114964_10500610	Not Available	571	Open in IMG/M
3300010885\|Ga0133913_10183934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5576	Open in IMG/M
3300010885\|Ga0133913_10310176	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4180	Open in IMG/M
3300010885\|Ga0133913_10536245	Not Available	3079	Open in IMG/M
3300010885\|Ga0133913_12655718	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1213	Open in IMG/M
3300010885\|Ga0133913_12693348	All Organisms → Viruses → Predicted Viral	1203	Open in IMG/M
3300011010\|Ga0139557_1001383	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5610	Open in IMG/M
3300011010\|Ga0139557_1073401	Not Available	571	Open in IMG/M
3300012017\|Ga0153801_1076694	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	587	Open in IMG/M
3300012348\|Ga0157140_10000533	All Organisms → Viruses → Predicted Viral	4669	Open in IMG/M
3300013372\|Ga0177922_10442025	Not Available	1237	Open in IMG/M
3300017707\|Ga0181363_1003029	All Organisms → Viruses → Predicted Viral	3797	Open in IMG/M
3300017707\|Ga0181363_1094241	Not Available	506	Open in IMG/M
3300017722\|Ga0181347_1122297	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	727	Open in IMG/M
3300017722\|Ga0181347_1173969	Not Available	578	Open in IMG/M
3300017736\|Ga0181365_1050769	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1036	Open in IMG/M
3300017747\|Ga0181352_1015549	All Organisms → Viruses → Predicted Viral	2408	Open in IMG/M
3300017747\|Ga0181352_1154735	Not Available	605	Open in IMG/M
3300017761\|Ga0181356_1017882	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2622	Open in IMG/M
3300017761\|Ga0181356_1143270	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300017766\|Ga0181343_1138318	Not Available	681	Open in IMG/M
3300017766\|Ga0181343_1214119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	525	Open in IMG/M
3300017766\|Ga0181343_1220568	Not Available	516	Open in IMG/M
3300017777\|Ga0181357_1212751	Not Available	685	Open in IMG/M
3300017778\|Ga0181349_1008546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4284	Open in IMG/M
3300017778\|Ga0181349_1127780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	931	Open in IMG/M
3300017785\|Ga0181355_1104426	All Organisms → Viruses → Predicted Viral	1170	Open in IMG/M
3300017785\|Ga0181355_1229004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	720	Open in IMG/M
3300019784\|Ga0181359_1018752	All Organisms → Viruses → Predicted Viral	2599	Open in IMG/M
3300019784\|Ga0181359_1050470	Not Available	1605	Open in IMG/M
3300019784\|Ga0181359_1076483	All Organisms → Viruses → Predicted Viral	1261	Open in IMG/M
3300019784\|Ga0181359_1144409	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300019784\|Ga0181359_1170137	Not Available	729	Open in IMG/M
3300019784\|Ga0181359_1223183	Not Available	591	Open in IMG/M
3300020205\|Ga0211731_10345878	Not Available	975	Open in IMG/M
3300020549\|Ga0207942_1011797	Not Available	1156	Open in IMG/M
3300020686\|Ga0214194_106729	All Organisms → Viruses → Predicted Viral	1064	Open in IMG/M
3300021519\|Ga0194048_10375043	Not Available	505	Open in IMG/M
3300021961\|Ga0222714_10655906	Not Available	517	Open in IMG/M
3300022179\|Ga0181353_1024803	Not Available	1585	Open in IMG/M
3300022190\|Ga0181354_1011698	All Organisms → Viruses → Predicted Viral	2610	Open in IMG/M
3300022190\|Ga0181354_1023708	All Organisms → Viruses → Predicted Viral	1968	Open in IMG/M
3300022190\|Ga0181354_1107760	Not Available	903	Open in IMG/M
3300022407\|Ga0181351_1042196	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1924	Open in IMG/M
3300022407\|Ga0181351_1066916	Not Available	1464	Open in IMG/M
3300025401\|Ga0207955_1038259	Not Available	812	Open in IMG/M
3300025410\|Ga0208875_1034378	Not Available	826	Open in IMG/M
3300025466\|Ga0208497_1107314	Not Available	507	Open in IMG/M
3300025778\|Ga0208388_1032412	Not Available	790	Open in IMG/M
3300025889\|Ga0208644_1357219	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	554	Open in IMG/M
3300027659\|Ga0208975_1013832	All Organisms → Viruses → Predicted Viral	2730	Open in IMG/M
3300027697\|Ga0209033_1237076	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	531	Open in IMG/M
3300027732\|Ga0209442_1094182	All Organisms → cellular organisms → Bacteria → Proteobacteria	1215	Open in IMG/M
3300027973\|Ga0209298_10232471	Not Available	741	Open in IMG/M
3300031758\|Ga0315907_10066440	All Organisms → Viruses → Predicted Viral	3134	Open in IMG/M
3300031758\|Ga0315907_10305005	All Organisms → Viruses → Predicted Viral	1306	Open in IMG/M
3300031784\|Ga0315899_11665283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	526	Open in IMG/M
3300031786\|Ga0315908_10297850	All Organisms → Viruses → Predicted Viral	1349	Open in IMG/M
3300031857\|Ga0315909_10431990	Not Available	932	Open in IMG/M
3300031857\|Ga0315909_10675176	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	675	Open in IMG/M
3300031857\|Ga0315909_10758055	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	620	Open in IMG/M
3300031951\|Ga0315904_10089640	All Organisms → Viruses → Predicted Viral	3264	Open in IMG/M
3300031951\|Ga0315904_10501742	All Organisms → Viruses → Predicted Viral	1070	Open in IMG/M
3300031963\|Ga0315901_10078323	All Organisms → Viruses → Predicted Viral	3119	Open in IMG/M
3300032050\|Ga0315906_10210087	All Organisms → Viruses → Predicted Viral	1823	Open in IMG/M
3300032050\|Ga0315906_11001199	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	629	Open in IMG/M
3300032092\|Ga0315905_10072239	All Organisms → Viruses → Predicted Viral	3494	Open in IMG/M
3300032092\|Ga0315905_10867011	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300032092\|Ga0315905_10893369	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300032092\|Ga0315905_11015080	Not Available	696	Open in IMG/M
3300032116\|Ga0315903_10847547	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	661	Open in IMG/M
3300032753\|Ga0316224_1014755	Not Available	4125	Open in IMG/M
3300033981\|Ga0334982_0515708	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526	Open in IMG/M
3300033993\|Ga0334994_0029873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3537	Open in IMG/M
3300033993\|Ga0334994_0292956	Not Available	830	Open in IMG/M
3300033995\|Ga0335003_0354373	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	642	Open in IMG/M
3300034062\|Ga0334995_0269091	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	1135	Open in IMG/M
3300034082\|Ga0335020_0064570	All Organisms → Viruses → Predicted Viral	1901	Open in IMG/M
3300034092\|Ga0335010_0620803	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	545	Open in IMG/M
3300034093\|Ga0335012_0242280	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	938	Open in IMG/M
3300034117\|Ga0335033_0013678	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5498	Open in IMG/M
3300034118\|Ga0335053_0693398	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	94.70%
Marine	Environmental → Aquatic → Marine	5.30%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	40.91%
Lake	Environmental → Aquatic → Freshwater → Lake	37.12%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	12.88%
Coastal	Environmental → Aquatic → Marine → Coastal	3.03%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.52%
Ice	Environmental → Aquatic → Freshwater → Ice	1.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.52%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	38.64%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	37.12%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	12.88%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.03%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.52%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.52%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	28.03%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	15.15%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	12.88%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.58%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	6.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.82%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.79%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.03%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.03%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.27%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.52%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	1.52%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.52%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.76%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.76%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.76%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.76%
Watersheds	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Watersheds	0.76%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004796	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006033	Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15	Environmental	Open in IMG/M
3300006118	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012348	Freshwater microbial communities from Coldwater Creek, Ontario, Canada - S44	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014962	Surface water microbial communities from Bangladesh - BaraHaldiaSW0309	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025778	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24768J34885_101674883	3300002447	Freshwater And Sediment	MEDQVTHSQIYARLLAVEAKVDSIDQNTKGLVEAIDWLQLNLR*
Ga0007817_10018412	3300003804	Freshwater	MESVTHEQIYERLVSLEAKVDEIDINTKGMVEAFNNVQGAFKVLGWIAKLVWLNL*
Ga0007861_10170063	3300003812	Freshwater	MENTTTVSHEQIYERLIKVEAKVDAIEKNTKELIEAFSALKGALKVLDWIASLAKPIG
Ga0066177_102870762	3300004096	Freshwater Lake	MENEVTHKQIYDRLIEVENKVDSIDKNTKGLVEAIKALDGAFKVL
Ga0066178_100080215	3300004124	Freshwater Lake	MENEVTHKQIYDRLVEVEAKVDTIDKNTSGLVEAIDAMQGAIK
Ga0007787_107035631	3300004240	Freshwater Lake	MKDVSHEQIYERLLAVEAKVDEIDKNTKDLVTAIDAAKGAVKVLNWIASIAQ
Ga0065173_10881601	3300004686	Freshwater	MENTTTVSHEQIYERLIKVEAKVDAIEKNTKELIEAFSALKGALKVLDWIASLAKPIGII
Ga0065173_10938681	3300004686	Freshwater	MENVTHEQIYERLVSLEAKVDDIDINTKGMVEAFNNVQGAFKVLGWIANVAKPIIIVV
Ga0007746_13380581	3300004763	Freshwater Lake	MENEVTHKQIYDRLVEVESKVDSIDQNTKGLVEAIKALDGAFKVLGW
Ga0007763_113401821	3300004796	Freshwater Lake	MEDQVTHSQIYERLLAVESKVDSIDKNTKGLVEAFDALQGAFKVLGW
Ga0049081_100148211	3300005581	Freshwater Lentic	MKDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGAVKVLNWIASIAQPVLWIG
Ga0049080_100391521	3300005582	Freshwater Lentic	MDEVTHKQIYERLLAVESKVDEIDKNTKGLVEAIKALDGAF
Ga0049080_102206631	3300005582	Freshwater Lentic	MTEVTHEQIYERLLAVETKVDTIDKNTSGLVEAIKAA
Ga0078894_105213363	3300005662	Freshwater Lake	MTQEVTHEQIYDRLVEVEAKVDSIDKNTKGLVEAINALDGAF
Ga0079957_10778113	3300005805	Lake	MQEVSHKQIYDRLVAVEKKVDHIDQNTAGMVVAFQAAAGAFTVLN
Ga0075012_105319121	3300006033	Watersheds	MNDVSHEQIYERLIAVESKVDRIDNNTKGLVEAIDAAQG
Ga0007859_10237241	3300006118	Freshwater	MEVTHEQIYERLKAVEEKVDRIDKNTVGLIDAFNAVQGAFKVLGWIAWLAKP
Ga0070749_100953243	3300006802	Aqueous	MSDVSHEQIYERLVAVEGKVDRIDNNTKGLVEAID
Ga0070749_106908551	3300006802	Aqueous	MEEVTHAQIYSRLVEVEAKVDSIDKNTKGIVEAMDALQGAFKVLGWVASAAKPILY
Ga0070748_11966453	3300006920	Aqueous	MSDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGAVKVLNWIAS
Ga0102877_11552863	3300007548	Estuarine	MEEVTHTQIYNRLVVVENKVDEIDKNTKVLVEAFDAVQGAFK
Ga0102859_10101531	3300007708	Estuarine	MTQEVTHAQIYERLLEVETKVDTIDKNTSGLVEAIKALD
Ga0114354_11847061	3300008119	Freshwater, Plankton	MTDVSHEQIYERLLAVEAKVDEIDKNTKDLVDAIDAAK
Ga0114841_12247391	3300008259	Freshwater, Plankton	MENEVTHKQIYDRLVEVESKVDSIDQNTKGLVEAMK
Ga0114363_10248256	3300008266	Freshwater, Plankton	MSDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGAVKVLNWIASI
Ga0114363_10478334	3300008266	Freshwater, Plankton	MTDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGAVKVLNWIASI
Ga0114363_12273142	3300008266	Freshwater, Plankton	MTDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKG
Ga0114876_11588381	3300008448	Freshwater Lake	MEDQVTHSQIYARLLAVEAKVDSIDQNTKGLVEAMKALDGAFKVLGWIASAAK
Ga0114876_12181491	3300008448	Freshwater Lake	MENEVTHKQIYDRLVEVEAKVDSIDQNTKGLVEAMKALDG
Ga0114880_10180031	3300008450	Freshwater Lake	MKDVSHEQIYERLLAVEAKVDEIDKNTKDLVTAIDAAKGAVKVLNWIASIAQPVLWI
Ga0114880_10316441	3300008450	Freshwater Lake	MTDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGA
Ga0114880_11124973	3300008450	Freshwater Lake	MTNKVTHEQIYERLIAVEAKVDSIDKNTSGLVEALKALDGAFKVLG
Ga0114880_11876504	3300008450	Freshwater Lake	MTDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGAVKVLN
Ga0114880_11905891	3300008450	Freshwater Lake	MEDQVTHSQIYERLLAVESKVDNIDQNTKGLVEAMKALDGAFKVLGW
Ga0114880_12226973	3300008450	Freshwater Lake	MTQEVTHEQIYNRLVEVEAKVDSIDKNTKGLVEAINALDGAF
Ga0114880_12228923	3300008450	Freshwater Lake	MTQEITHEQIYNRLVEVEAKVDSIDKNTKGLVEAINALDGAF
Ga0114973_100600364	3300009068	Freshwater Lake	MENEVTHKQIYDRLVEVEAKVDSIDKNTKGLVEAFDALQGAFKVLGWI
Ga0114963_103450372	3300009154	Freshwater Lake	METSPISHQQIYDRLVAVEGKVDTIDKNTKALVEGFNAVQGAFKVFG
Ga0114968_100004801	3300009155	Freshwater Lake	MSEVTHKQIYDRLVEVESKVDSIDKNTKGLVEAFDALQGAFKVLGWVASAAKPIL
Ga0114968_100801801	3300009155	Freshwater Lake	MDEVTHKQIYDRLVLVESKVDSIDKNTKGLVEAFDALQGAFKVLGWVASAAKPIL
Ga0114968_101215082	3300009155	Freshwater Lake	MDEKVTHEQIYDRLLAVETKVDSIDKNTRGLVEAINAL
Ga0114968_105573863	3300009155	Freshwater Lake	MENEVTHKQIYDRLVEVEAKVDSIDKNTKGLVEAFDALHGA*
Ga0114968_107007181	3300009155	Freshwater Lake	MSEVSHEQIYERLIAVEQKVDRIDNNTKGLVEAVDAAQGAVKVLGWIA
Ga0114981_101777851	3300009160	Freshwater Lake	MDEVTHKQIYDRLVEVESKVDSIDKNTKGLVEAFDALQGAFK
Ga0114979_103903404	3300009180	Freshwater Lake	MENEVTHKQIYDRLIEVEAKVDSIDKNTKGLVEAFDALQG
Ga0114969_101041051	3300009181	Freshwater Lake	MSEVTHEQIYNRLIEVETKVDNIDKNTKGLVDAINALDG
Ga0114974_106201831	3300009183	Freshwater Lake	MSDVSHEQIYERLLAVEAKVDEIDKNTKDLVTAIDAAKGAVKVLNWIASIAQ
Ga0114976_105052634	3300009184	Freshwater Lake	MDEVTHKQIYDRLVEVETKVDSIDKNTKGLVEAFD
Ga0114976_106349073	3300009184	Freshwater Lake	MDEVTHKQIYDRLVEVESKVDSIDKNTKGLVEAFDALQGAFKVLGW
Ga0114964_105006102	3300010157	Freshwater Lake	METVTHQQIYDRLIAVESKVDEIDKNTKDLVEGFKAVK
Ga0133913_101839341	3300010885	Freshwater Lake	MAEVTHEQIYNRLIEVETKVDSIDKNTKGLVEAINALDGA
Ga0133913_103101765	3300010885	Freshwater Lake	MDEKVTHEQIYERLLEVESKVDNIDKNTKGLVEAFDA
Ga0133913_105362451	3300010885	Freshwater Lake	MDEKVTHEQIYARLLEVESKVDNIDKNTKGLVEAFDALQGAFKVLGWI
Ga0133913_126557184	3300010885	Freshwater Lake	MENEVTHKQIYDRLVEVEAKVDSIDKNTKGLVEAFDALQGAFKVLGWIASAAKPI
Ga0133913_126933481	3300010885	Freshwater Lake	MSEVSHEQIYERLIAVEQKVDRIDNNTKGLVEAIDAA
Ga0139557_10013836	3300011010	Freshwater	MENEVTHKQIYDRLVEVESKVDNIDQNTKGLVEAIKALDGAFKVLGW
Ga0139557_10734012	3300011010	Freshwater	MTDVSHEQIYERLLAVEAKVDSIDQNTKGLVEAIKALDGAFKVLGW
Ga0153801_10766942	3300012017	Freshwater	MENEVTHKQIYDRLVEVESKVDSIDKNTKGLVEAINALDGAFK
Ga0157140_100005331	3300012348	Freshwater	MSEQVTHEQIYSRLLAVEAKVDDIDKNTKDLVDAINAAKGAVKVLNWIASI
Ga0177922_104420252	3300013372	Freshwater	MENEVTHKQIYDRLVEVETKVDSIDQNTKGLVEAI
Ga0134315_10580362	3300014962	Surface Water	MENVTHAQIYERLVAVEAKVDHIDKNTKDLVDGFKAVQGAFP
Ga0181363_10030291	3300017707	Freshwater Lake	MENVSHEQIYERLIAVEGKVDRIDNNTKGLVDAIDAMQGAIKV
Ga0181363_10942412	3300017707	Freshwater Lake	MSEVSHAQIYERLIAVENKVDSIDKNTKGLVEAINA
Ga0181347_11222973	3300017722	Freshwater Lake	MTQEVTHEQIYERLLAVENKVDSIDQNTKGLVEAIKAL
Ga0181347_11739691	3300017722	Freshwater Lake	MTQEVTHEQIYERLLAVENKVDSIDKNTSGLVEAIKALDGAFKVLGWIASAAKPILC
Ga0181365_10507694	3300017736	Freshwater Lake	MTQEVTHEQIYERLLAVENKVDSIDQNTKGLVEAM
Ga0181352_10155491	3300017747	Freshwater Lake	MEDQVTHSQIYARLLAVEAKVDSIDQNTKGLVEAMKALDGAFKVLGWL
Ga0181352_11547351	3300017747	Freshwater Lake	MQEVTHAQIYERLVAVESKVDHIDKNTKDLVDGFNAVQGA
Ga0181356_10178821	3300017761	Freshwater Lake	MTTEVTHKQIYDRLVEVESKVDSIDQNTKGLVEAMKALDGAFKVLGWIASAAKPI
Ga0181356_11432701	3300017761	Freshwater Lake	MENEVTHKQIYDRLIEVEAKVDSIDKNTKGLVEAFDALHGAFK
Ga0181343_11383181	3300017766	Freshwater Lake	MENEVTHKQIYDRLVEVESKVDSIDQNTKGLVEAIKAL
Ga0181343_12141192	3300017766	Freshwater Lake	MEDQVTHSQIYERLLAVESKVDEIDKNTKGLVEAIKALDGAFKVLGWVASAAK
Ga0181343_12205683	3300017766	Freshwater Lake	MENEVTHKQIYDRLVEVEAKVDNIDQNTKGLVEAMKALDGAFKVLG
Ga0181357_12127512	3300017777	Freshwater Lake	MSEVSHAQIYERLVKVEEKVDRIDNNTRGLVEAIQAAQGAVKVLNWIASFAK
Ga0181349_10085468	3300017778	Freshwater Lake	MTQEVTHEQIYERLLAVESKVDSIDKNTSGLVEAI
Ga0181349_11277801	3300017778	Freshwater Lake	MQEEVTHKQIYDRLVEVESKVDTIDKNTNGLVEAIKALDGAFKVLN
Ga0181355_11044261	3300017785	Freshwater Lake	MTDVSHEQIYERLLAVEAKVDEIDKNTKDLVDAIDAAKGAVQVLNWIASIAQPVLWIGG
Ga0181355_12290043	3300017785	Freshwater Lake	MTNVSHEQIYERLLAVEAKVDEIDKNTKDLVTAIDAAKGAVKVLNWIASIAQ
Ga0181359_10187523	3300019784	Freshwater Lake	MTQEVTHEQIYERLLAVETKVDSIDKNTSGLVEAIKA
Ga0181359_10504704	3300019784	Freshwater Lake	MENVSHEQIYERLIAVEGKVDRIDNNTKGLVEAIDAMQGAIKVLGW
Ga0181359_10764831	3300019784	Freshwater Lake	MENEVTHKQIYDRLVEVEAKVDNIDQNTKGLVEAIKALDGA
Ga0181359_11444091	3300019784	Freshwater Lake	MSDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGAVKVLNWIASIAQPVLC
Ga0181359_11701373	3300019784	Freshwater Lake	MEDQVTHSQIYARLLAVEAKVDSIDQNTKGLVEAMKALDGAFKVLG
Ga0181359_12231831	3300019784	Freshwater Lake	MSEVSHEQIYNRLLAVEVKVDEIDKNTKDLVGAIQAAQGA
Ga0211731_103458784	3300020205	Freshwater	MEDQVTHSQIYARLLEVEAKVDSIDQNTKGLVEAIKALDG
Ga0207942_10117971	3300020549	Freshwater	MENEVTHKQIYDRLVEVESKVDSIDQNTKGLVEAIKALDGAFKVLGWIASAA
Ga0214194_1067291	3300020686	Freshwater	MLILPNLDDAVTHEQIYLRLLEVEAKVDAIDASTKQLVEAFEALQGALKVLNWIASLAKP
Ga0194048_103750432	3300021519	Anoxic Zone Freshwater	MIEVSHEQIYERLVAVEQKVDRIDNNTKGLVEAID
Ga0222714_106559061	3300021961	Estuarine Water	MENVTHEQIYARLLEVESKVDKIDNNTKGLVDAIDAMQG
Ga0181353_10248034	3300022179	Freshwater Lake	MEDQVTHSQIYARLLAVEAKVDSIDQNTKGLVEAMK
Ga0181354_10116981	3300022190	Freshwater Lake	MENEVTHKQIYDRLVEVESKVDSIDQNTKGLVEAI
Ga0181354_10237081	3300022190	Freshwater Lake	MEDQVTHKQIYDRLVEVETKVDSIDKNTKGLVEAINALD
Ga0181354_11077601	3300022190	Freshwater Lake	MEDQVTHSQIYARLLAVEAKVDSIDQNTKGLVEAMKALDGAFKVLGW
Ga0181351_10421961	3300022407	Freshwater Lake	MENEVTHKQIYDRLVEVESKVDNIDQNTKGLVEAIKALDGAFKVLGWIAS
Ga0181351_10669164	3300022407	Freshwater Lake	MENVSHEQIYERLIAVEGKVDRIDNNTKGLVEAIDAMQGAIKVLGWVASAAK
Ga0207955_10382591	3300025401	Freshwater	MESVTHEQIYERLVSLEAKVDEIDINTKGMVEAFNNVQGAFKVLGWIASVAKPIIIVV
Ga0208875_10343781	3300025410	Freshwater	MENVTHEQIYERLVSLEAKVDDIDINTKGMVEAFNNLQGAFKVLGWIA
Ga0208497_11073142	3300025466	Freshwater	MEVVTHEQIYNRLISLETKVDSIDHNTKDMVQAFHNLQGAFKVLGWIASIAKPIIVV
Ga0208388_10324122	3300025778	Freshwater	MEVTHEQIYERLKAVEEKVDRIDKNTIGLIDAFNAVQGAFKVLGWIAWLAKPV
Ga0208644_13572191	3300025889	Aqueous	MSNVSHEQIYERLVAVEGKVDRIDNNTKGLVEAIDAAQGAIKVLGWI
Ga0208975_10138321	3300027659	Freshwater Lentic	MEDQVTHSQIYERLLAVESKVDSIDQNTKGLVEAMKALDGAFKVLGWVASAAKPI
Ga0209033_12370761	3300027697	Freshwater Lake	MKDVSHEQIYERLLAVEAKVDEIDKNTKDLVTAIDAA
Ga0209442_10941821	3300027732	Freshwater Lake	MTEVTHEQIYERLLAVESKIDSIDKNTKGLVEAFDALQGAFKVLGW
Ga0209298_102324712	3300027973	Freshwater Lake	MAEVTHEQIYERLIEVETKVDSIDKNTKGLVEAIN
Ga0315907_100664401	3300031758	Freshwater	MKDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGAVKVLNW
Ga0315907_103050053	3300031758	Freshwater	MSDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGAVKVLNWIASIAQPVLWIGG
Ga0315899_116652831	3300031784	Freshwater	MTQEVTHEQIYERLLAVENKVDSIDKNTKDLVEAIDAAKGAVKVLNWIASIAQPV
Ga0315908_102978501	3300031786	Freshwater	MTNEVTHEQIYERLCAVEAKVDQLDKNTKDLVEAIDAAKGAVKVLNWIASIAQPVL
Ga0315909_104319901	3300031857	Freshwater	MEDQVTHSQIYARLLAVEAKVDSIDQNTKGLVEAMKALDGAFKVLGWI
Ga0315909_106751762	3300031857	Freshwater	MSDVSHEQIYERLLAVEAKVDEIDKNTTDLVEAIDAAKGAVKVLNWIASIAQPVLWIGG
Ga0315909_107580552	3300031857	Freshwater	MKDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAIDAAKGAVKVLNWIASIAQPVLWIGG
Ga0315904_100896407	3300031951	Freshwater	MEDQVTHSQIYERLLAVESKVDSIDQNTKGLVEAMKALDGAFKVLGWIASA
Ga0315904_105017424	3300031951	Freshwater	MENEVTHKQIYDRLVEVEAKVDSIDQNTKGLVEAMKALDGAFKVL
Ga0315901_100783238	3300031963	Freshwater	MTDVSHEQIYERLLAVEAKVDEIDKNTKDLVDAIDA
Ga0315906_102100871	3300032050	Freshwater	MTDVSHEQIYERLLAVEAKVDEIDKNTKDLVDAIDAAKGAVKVLNWIASI
Ga0315906_110011993	3300032050	Freshwater	MSDVSHEQIYERLLAVEAKVDEIDKNTKDLVTAIDAAK
Ga0315905_100722395	3300032092	Freshwater	MTDVSHEQIYERLLAVEAKVDEIDKNTKDLVEAID
Ga0315905_108670112	3300032092	Freshwater	MTQEVTHEQIYERLLAVETKVDDIDKNTKGLVEAINALD
Ga0315905_108933692	3300032092	Freshwater	MTQEVTHEQIYERLLAVETKVDDIDKNTKGLVEAINA
Ga0315905_110150804	3300032092	Freshwater	MENEVTHKQIYDRLVEVEAKVDSIDQNTKGLVEAIKALDGAF
Ga0315903_108475471	3300032116	Freshwater	MSNVSHEQIYERLLAVEAKVDEIDKNTKGLVEAINAAHGAVKVLNWIASIAQPVLWI
Ga0316224_10147555	3300032753	Freshwater	MENVTHEQIYERLVSLEAKVDDIDINTKGMVEAFNNVQGAFKVLGWIASAAKPIIAI
Ga0334982_0515708_364_525	3300033981	Freshwater	MQEVTHAQIYERLVAVEAKVDTIDKNTSDLVGAIEAAKGAVKVLNWIASIAQPV
Ga0334994_0029873_3423_3536	3300033993	Freshwater	MENEVTHKQIYDRLVEVETKVDSIDQNTKGLVEAIKAL
Ga0334994_0292956_709_828	3300033993	Freshwater	MSEVSHEQIYERLIAVEQKVDRIDNNTKGLVEAIDAAQGA
Ga0335003_0354373_480_641	3300033995	Freshwater	MSDISHEQIYERLLAVELKVDEIDKNTKGLVDAINALDGAFKVLGWVASAAKPI
Ga0334995_0269091_971_1135	3300034062	Freshwater	MSEVSHEQIYERLIAVEQKVDRIDNNTKGLVEAIDAAQGAVKVLGWIASLAKPML
Ga0335020_0064570_2_109	3300034082	Freshwater	MTQEVTHEQIYERLLAVETKVDTIDKNTSGLVEAIK
Ga0335010_0620803_2_121	3300034092	Freshwater	MKSEVSHEQIYERLLAVELKVDEIDKNTKGLVGAIDALDG
Ga0335012_0242280_3_143	3300034093	Freshwater	MTQEVTHEQIYERLLAVENKVDSIDKNTSGLVDALKALDGAFKVLGW
Ga0335033_0013678_2_133	3300034117	Freshwater	MQEVTHKQIYDRLIEVESKVDEIDKNTKGLVEAIDALQGAFKVL
Ga0335053_0693398_3_149	3300034118	Freshwater	MENEVTHKQIYDRLVEVESKVDSIDQNTKGLVEAMKALDGAFKVLGWIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060723

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences