Metagenome Family F060694

Overview

Basic Information

• Family ID: F060694
• Family Type: Metagenome
• Number of Sequences: 132
• Average Sequence Length: 38 residues
• Representative Sequence: VRQTWGERLAVFVFALALLAAIVGVSFAAGYIIGRLIL
• Number of Associated Samples: 101
• Number of Associated Scaffolds: 132

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 62.88 %
• % of genes near scaffold ends (potentially truncated): 12.12 %
• % of genes from short scaffolds (< 2000 bps): 85.61 %
• Associated GOLD sequencing projects: 94
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (98.485 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.697 % of family members)
• Environment Ontology (ENVO): Unclassified (29.545 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (51.515 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 50.00%
  β-sheet: 0.00%
  Coil/Unstructured: 50.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF12773	DZR	16.67
PF00334	NDK	12.12
PF08245	Mur_ligase_M	5.30
PF02545	Maf	3.79
PF10458	Val_tRNA-synt_C	3.03
PF08241	Methyltransf_11	2.27
PF04166	PdxA	0.76
PF00119	ATP-synt_A	0.76
PF04093	MreD	0.76
PF02653	BPD_transp_2	0.76
PF12911	OppC_N	0.76
PF06723	MreB_Mbl	0.76
PF02749	QRPTase_N	0.76
PF00144	Beta-lactamase	0.76
PF00005	ABC_tran	0.76
PF01323	DSBA	0.76
PF04280	Tim44	0.76
PF08545	ACP_syn_III	0.76
PF08397	IMD	0.76
PF00583	Acetyltransf_1	0.76
PF08264	Anticodon_1	0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0105	Nucleoside diphosphate kinase	Nucleotide transport and metabolism [F]	12.12
COG0424	7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.79
COG0157	Nicotinate-nucleotide pyrophosphorylase	Coenzyme transport and metabolism [H]	0.76
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	0.76
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.76
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.76
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.76
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1995	4-hydroxy-L-threonine phosphate dehydrogenase PdxA	Coenzyme transport and metabolism [H]	0.76
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.76
COG2891	Cell shape-determining protein MreD	Cell wall/membrane/envelope biogenesis [M]	0.76
COG4395	Predicted lipid-binding transport protein, Tim44 family	Lipid transport and metabolism [I]	0.76

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.48 %
Unclassified	root	N/A	1.52 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.48 %
Unclassified	root	N/A	1.52 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.48 %
Unclassified	root	N/A	1.52 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
Unclassified	root	N/A	1.52 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Unclassified	root	N/A	1.52 %

Level 6

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	10.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.52 %
Unclassified	root	N/A	1.52 %

Level 7

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.09 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8.33 %
Unclassified	root	N/A	1.52 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.76 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.09 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.52 %
Unclassified	root	N/A	1.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.76 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.09 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.52 %
Unclassified	root	N/A	1.52 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.76 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.76 %

Level 10

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.09 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.52 %
Unclassified	root	N/A	1.52 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.76 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.76 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2088090008|P3_DRAFT_NODE_36906_len_2726_cov_20_373074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2776
3300000956|JGI10216J12902_104380859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634
3300001537|A2065W1_10607817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1272
3300001686|C688J18823_10945162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547
3300004480|Ga0062592_101814240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597
3300005186|Ga0066676_10068524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2074
3300005526|Ga0073909_10209023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848
3300005526|Ga0073909_10306182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724
3300005526|Ga0073909_10348328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686
3300005534|Ga0070735_10014501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5870
3300005540|Ga0066697_10216471	All Organisms → cellular organisms → Bacteria	1138
3300005552|Ga0066701_10215416	All Organisms → cellular organisms → Bacteria	1181
3300005553|Ga0066695_10192592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1278
3300005556|Ga0066707_10538427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755
3300005614|Ga0068856_101785695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627
3300005713|Ga0066905_101092280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708
3300005764|Ga0066903_100029049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6191
3300005764|Ga0066903_100633769	All Organisms → cellular organisms → Bacteria	1863
3300005764|Ga0066903_101122427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1452
3300005764|Ga0066903_102532710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	994
3300005844|Ga0068862_101005223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825
3300005844|Ga0068862_102514461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527
3300005985|Ga0081539_10001713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35164
3300006032|Ga0066696_10251370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1142
3300006032|Ga0066696_11006220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530
3300006046|Ga0066652_100189031	All Organisms → cellular organisms → Bacteria	1763
3300006806|Ga0079220_12117175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504
3300006854|Ga0075425_101744027	All Organisms → cellular organisms → Bacteria	700
3300009012|Ga0066710_101291343	All Organisms → cellular organisms → Bacteria	1132
3300009012|Ga0066710_101676773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	969
3300009012|Ga0066710_104445600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524
3300009088|Ga0099830_10274081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1341
3300009089|Ga0099828_11010077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741
3300009090|Ga0099827_10002177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10733
3300009090|Ga0099827_10184748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1726
3300009098|Ga0105245_11537668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717
3300009137|Ga0066709_100174819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2786
3300009137|Ga0066709_101279970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1077
3300009137|Ga0066709_101281291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1076
3300009137|Ga0066709_103893085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542
3300009176|Ga0105242_11468450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711
3300009545|Ga0105237_12235915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556
3300009789|Ga0126307_10002936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11599
3300009789|Ga0126307_10003674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10526
3300009840|Ga0126313_10224952	All Organisms → cellular organisms → Bacteria	1448
3300010036|Ga0126305_10473740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833
3300010037|Ga0126304_11077239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549
3300010039|Ga0126309_10579324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703
3300010039|Ga0126309_11061553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548
3300010044|Ga0126310_11416069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567
3300010044|Ga0126310_11517626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550
3300010166|Ga0126306_10779239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770
3300010360|Ga0126372_11221614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777
3300010375|Ga0105239_10981273	All Organisms → cellular organisms → Bacteria	971
3300011119|Ga0105246_11032095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	746
3300012011|Ga0120152_1026460	All Organisms → cellular organisms → Bacteria	2106
3300012011|Ga0120152_1030435	All Organisms → cellular organisms → Bacteria	1915
3300012096|Ga0137389_10965379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731
3300012201|Ga0137365_11082379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578
3300012204|Ga0137374_10000925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32275
3300012204|Ga0137374_10008416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12202
3300012204|Ga0137374_10030676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5884
3300012204|Ga0137374_10697230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763
3300012204|Ga0137374_10928248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636
3300012204|Ga0137374_11054488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583
3300012209|Ga0137379_10748885	All Organisms → cellular organisms → Bacteria	882
3300012210|Ga0137378_10405915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1264
3300012212|Ga0150985_106066265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237
3300012212|Ga0150985_122550462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2507
3300012285|Ga0137370_10857862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562
3300012349|Ga0137387_10751567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705
3300012350|Ga0137372_10007077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	10859
3300012350|Ga0137372_10033238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4712
3300012350|Ga0137372_10331021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1171
3300012353|Ga0137367_11213456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503
3300012469|Ga0150984_110154786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759
3300012901|Ga0157288_10273055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578
3300012902|Ga0157291_10224385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610
3300012922|Ga0137394_11553165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520
3300012958|Ga0164299_10812479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668
3300012961|Ga0164302_11674356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532
3300012972|Ga0134077_10149104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	932
3300012984|Ga0164309_11606217	All Organisms → cellular organisms → Bacteria	557
3300013296|Ga0157374_12134926	All Organisms → cellular organisms → Bacteria	587
3300013501|Ga0120154_1021836	All Organisms → cellular organisms → Bacteria	1656
3300015264|Ga0137403_10727866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	851
3300015265|Ga0182005_1118127	All Organisms → cellular organisms → Bacteria	753
3300015358|Ga0134089_10445628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559
3300015371|Ga0132258_11329492	All Organisms → cellular organisms → Bacteria	1816
3300015371|Ga0132258_12437576	All Organisms → cellular organisms → Bacteria	1310
3300015371|Ga0132258_13964316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1005
3300015372|Ga0132256_102556098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612
3300015373|Ga0132257_102408107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683
3300015373|Ga0132257_103934563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540
3300015373|Ga0132257_104526749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506
3300018027|Ga0184605_10116958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1185
3300018061|Ga0184619_10338896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687
3300018071|Ga0184618_10137028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	991
3300018072|Ga0184635_10163021	All Organisms → cellular organisms → Bacteria	890
3300018431|Ga0066655_10948458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591
3300018468|Ga0066662_10525460	Not Available	1086
3300018468|Ga0066662_11151105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780
3300022756|Ga0222622_10143980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1529
3300024187|Ga0247672_1046110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720
3300024330|Ga0137417_1410347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2052
3300025915|Ga0207693_11475708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502
3300025929|Ga0207664_10823839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834
3300025936|Ga0207670_10968337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	715
3300025939|Ga0207665_10502296	All Organisms → cellular organisms → Bacteria	937
3300025986|Ga0207658_11595201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	597
3300026075|Ga0207708_10810353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	806
3300026313|Ga0209761_1149441	All Organisms → cellular organisms → Bacteria	1103
3300026324|Ga0209470_1278391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642
3300026524|Ga0209690_1104852	All Organisms → cellular organisms → Bacteria	1149
3300026550|Ga0209474_10632114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550
3300027821|Ga0209811_10305478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613
3300027862|Ga0209701_10208157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1163
3300027874|Ga0209465_10669370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511
3300027882|Ga0209590_10001972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	8092
3300027882|Ga0209590_10132933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1525
3300027986|Ga0209168_10010729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5486
3300028744|Ga0307318_10110082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935
3300028824|Ga0307310_10755349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501
3300028828|Ga0307312_10638508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705
3300028878|Ga0307278_10258855	All Organisms → cellular organisms → Bacteria	772
3300028885|Ga0307304_10554915	Not Available	530
3300031543|Ga0318516_10810489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529
3300031548|Ga0307408_101533339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631
3300031890|Ga0306925_11961019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554
3300031938|Ga0308175_100206209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1940
3300031996|Ga0308176_12326795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572
3300033004|Ga0335084_10618307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1108

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.82%
Host-Associated	Host-Associated	18.18%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.03%
Plants	Host-Associated → Plants	18.18%
Aquatic	Environmental → Aquatic	3.79%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Sediment	Environmental → Aquatic → Sediment	3.79%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.18%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.58%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.58%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.03%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012212	Combined assembly of Hopland grassland soil	Host-Associated
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015372	Soil combined assembly	Host-Associated
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00937580	2088090008	Soil	VHSWKERLAVFAFALAVITSIVAVAFATGYIIGKLIL
JGI10216J12902_1043808592	3300000956	Soil	VQGWGERLAVLGFAAALLAAFVGLSFALGYIIGRLIL*
A2065W1_106078172	3300001537	Permafrost	VHSWKERLAVFAFALAVITGIVAVAFATGYIIGKLIL*
C688J18823_109451622	3300001686	Soil	VQQTWGERLAVFVFALALLAGLIGVTFAAGYIIGRLIL*
Ga0062592_1018142402	3300004480	Soil	GKVRQTWGERLAVFTFALALLAGIVGVSFAAGYIIGKLIL*
Ga0066676_100685242	3300005186	Soil	VVQQTWGERLAVFVFALALLAGIIGVTFAAGYIIGRLIL*
Ga0073909_102090231	3300005526	Surface Soil	VRQTWGQRLAVFAFALALLAGIVGASFAAGYIIGKLIL*
Ga0073909_103061822	3300005526	Surface Soil	MHQTWGERLAVFAFAFLLLAGVVGVTFAAGYIIGRLIL*
Ga0073909_103483282	3300005526	Surface Soil	VQSWKERLAVFAFALAFITAIVLGAFAAGYIIGKLIL*
Ga0070735_100145016	3300005534	Surface Soil	MRTTWGERLAVFAFALAVVAAIVGAAFAAGYIIGRLIL*
Ga0066697_102164712	3300005540	Soil	VRQTWGERLAVFVFALALVAGIVGVSFAAGYIIGRLIL*
Ga0066701_102154161	3300005552	Soil	VRQSWGERLAVFAFALAVVAAIVGVAFAAGYIIGRLIL*
Ga0066695_101925921	3300005553	Soil	NEKVRQTWGQRLAVFAFALALLAGIVGVSFAAGYIIGRLIL*
Ga0066707_105384271	3300005556	Soil	VRQSWGERLAVLAFALALVGAIVGVAFAAGYIIGRLIL*
Ga0068856_1017856952	3300005614	Corn Rhizosphere	VQQTWGERLAVFVFALALLAGLVGVTFAAGYIIGRLIL*
Ga0066905_1010922802	3300005713	Tropical Forest Soil	MHQTWGERLAVFAFALLLLAGLVGVTFAAGYIIGRLIL*
Ga0066903_1000290494	3300005764	Tropical Forest Soil	MHQTWGQRLAVFAFAFAILAGVVGVTFAAGYIIGRLIL*
Ga0066903_1006337694	3300005764	Tropical Forest Soil	MHQTWGERLAVFAFALALLAGLVGVTFAAGYIIGRLIL*
Ga0066903_1011224272	3300005764	Tropical Forest Soil	MHQTWGERLAVFAFALAILAGLVGVTFAAGYIIGRLIL*
Ga0066903_1025327102	3300005764	Tropical Forest Soil	MHQTWGERLAVFGFAFLLLAGVVGVTFAAGYIIGRLIL*
Ga0068862_1010052232	3300005844	Switchgrass Rhizosphere	VRQTWGDRLAVFTFALFLLAAIVGISFAAGYIIGRLIL*
Ga0068862_1025144612	3300005844	Switchgrass Rhizosphere	VHSWKERLSVFAFALAVVAAIVGAAFATGYIIGKLIL*
Ga0081539_1000171326	3300005985	Tabebuia Heterophylla Rhizosphere	VQDWSERLAVLGFALALLAAFVGLSFAVGYIIGKLIL*
Ga0066696_102513702	3300006032	Soil	MRTTWGERLAVFAFAAAVLAAIVGAAFAAGYIIGKLIL*
Ga0066696_110062201	3300006032	Soil	VRQSWGDRIAVFAFALAVVAAIVGISFAAGYIIGKLIL*
Ga0066652_1001890312	3300006046	Soil	VQQTWGERLAVFFFALALLAGLVGVTFAAGYIIGRLIL*
Ga0079220_121171752	3300006806	Agricultural Soil	WGERLAVFGFALALLAGLVGVTFAAGYIIGRLIL*
Ga0075425_1017440272	3300006854	Populus Rhizosphere	VRQTWGDRLAVFAFGLCVVAAIVGISFAAGYIIGKLIL*
Ga0066710_1012913433	3300009012	Grasslands Soil	VRQSWGDRLAVFAFALAVVAAIVGISFAAGYIIGKLIL
Ga0066710_1016767732	3300009012	Grasslands Soil	VRQTWGERLAVFVFALALVAGIVGVSFAAGYIIGRLIL
Ga0066710_1044456002	3300009012	Grasslands Soil	VRQTWGERLAVFVFALALLAAIVGVSFAAGYIIGRLIL
Ga0099830_102740812	3300009088	Vadose Zone Soil	VRQSWGERLAVLAFALALVGAIVGVAFAAGYIIGKLIL*
Ga0099828_110100772	3300009089	Vadose Zone Soil	VRQSWGERLAVFVFALAVVAAIVGVAFAAGYIIGKLIL*
Ga0099827_100021779	3300009090	Vadose Zone Soil	VRQSWGERLAVFAFALAVVAAIVGVAFAAGYIIGKLIL*
Ga0099827_101847482	3300009090	Vadose Zone Soil	VRQTWGQRLAVFAFALALIAGIVGVSFAAGYIIGRLIL*
Ga0105245_115376681	3300009098	Miscanthus Rhizosphere	HVRQTWGQRFAVFAFALALLALIVGASFAAGYIIGRLIL*
Ga0066709_1001748192	3300009137	Grasslands Soil	VRQSWGDRLAVFAFALAVVAAIVGISFAAGYIIGKLIL*
Ga0066709_1012799702	3300009137	Grasslands Soil	VRQSWGERLAVLAFALALLGAIVGVAFAAGYIIGKLIL*
Ga0066709_1012812912	3300009137	Grasslands Soil	MRQRRSRLGVLAFATAALLAIVGLAFAAGYIIGKLVL*
Ga0066709_1038930851	3300009137	Grasslands Soil	VESWKERLAVFAFALGVITAIVVVAFAAGYIIGKLIL*
Ga0105242_114684502	3300009176	Miscanthus Rhizosphere	VQQTWGERLAVFAFALAILAGLVGVTFAAGYIIGRLIL*
Ga0105237_122359151	3300009545	Corn Rhizosphere	NEVVRQTWGDRLAVFTFALFLLAAIVGISFAAGYIIGRLIL*
Ga0126307_100029363	3300009789	Serpentine Soil	VQTWGERLAVLAFALTLLAAFVGLSFAVGYIIGRLIL*
Ga0126307_100036748	3300009789	Serpentine Soil	VQTWGERLTVLAFALALLVAFVGLSFAAGYIIGRLIL*
Ga0126313_102249523	3300009840	Serpentine Soil	VQQTWGERLAVFVFALAILAGLVGVTFAAGYIIGRLIL*
Ga0126305_104737401	3300010036	Serpentine Soil	VQTWGERLAVLAFALTLLAAFVGLSFAAGYIIGRLIL*
Ga0126304_110772392	3300010037	Serpentine Soil	VQTWGERLTVLAFALALLAAFVGLSFAGGYIIGRLIL*
Ga0126309_105793242	3300010039	Serpentine Soil	VQTWGERLAVLAFALTLLVGFVGLSFAAGYIIGRLIL*
Ga0126309_110615532	3300010039	Serpentine Soil	QTWGQRLAVFTFALALLGGIVGVSFAAGYIIGKLIL*
Ga0126310_114160692	3300010044	Serpentine Soil	VRQTWGQRLAVFTFALALLTGIVGVSFAAGYIIGKLIL*
Ga0126310_115176262	3300010044	Serpentine Soil	VQTWGERLGVLAFAVVLLAAFVGVSFATGYIIGRLIL*
Ga0126306_107792392	3300010166	Serpentine Soil	VQTWGERLAVLAFALALLAAFVGLSFAAGYIIGRLIL*
Ga0126372_112216141	3300010360	Tropical Forest Soil	VRHTWGERIAVFAFAIALVAAIVGASFAAGYIIGRLIL*
Ga0105239_109812732	3300010375	Corn Rhizosphere	VHQTWGERLAVFVFALALLAGLVGVTFAAGYIIGRLIL*
Ga0105246_110320951	3300011119	Miscanthus Rhizosphere	RQTWGDRLAVFTFALFLLAAIVGISFAAGYIIGRLIL*
Ga0120152_10264604	3300012011	Permafrost	VRQTWRERLAVFMFAVAFIAAIVGISFAAGYIIGKLIL*
Ga0120152_10304352	3300012011	Permafrost	VQSWKERLAVFAFALGLITGIVVVAFAAGYIIGKLIL*
Ga0137389_109653792	3300012096	Vadose Zone Soil	VRQSWGERLAVFAFALAVVAAIVGVAFAAGYRIGRLIL*
Ga0137365_110823792	3300012201	Vadose Zone Soil	VQQTWGERLAVFAFALALLAGLVGVTFAAGFLIGRILL*
Ga0137374_1000092521	3300012204	Vadose Zone Soil	VHGWGDRLAVLGFALALLAAFVGLSFTVGYIIGKLIL*
Ga0137374_1000841612	3300012204	Vadose Zone Soil	MRTTWGERLAVFAFALAVLFAIVGAAFAAGYIIGKLIL*
Ga0137374_100306764	3300012204	Vadose Zone Soil	VQTWGERLGVLAFALVLLGAFVGLSFATGYIIGRLIL*
Ga0137374_106972302	3300012204	Vadose Zone Soil	VRQTWGERLAVFGFALALLAGIVGVSFAAGYIIGKLIL*
Ga0137374_109282482	3300012204	Vadose Zone Soil	VRQTWGERLAVFAFALALLAGIVGVSFAAGYIIGRIIL*
Ga0137374_110544882	3300012204	Vadose Zone Soil	VQTWGERLGVLAFALVLLAAFVGLSFATGYIIGRLIL*
Ga0137379_107488851	3300012209	Vadose Zone Soil	VRQSWGERLAVFAFALAVVAAIVGISFAAGYIIGKLIL*
Ga0137378_104059153	3300012210	Vadose Zone Soil	VESWKERLAVFAFALGLITGIVVVAFAAGYIIGKLIL*
Ga0150985_1060662654	3300012212	Avena Fatua Rhizosphere	WGERLAVFVFALAILAGLVGVTFAAGYIIGRLIL*
Ga0150985_1225504622	3300012212	Avena Fatua Rhizosphere	VRQTWGDRLAVFAFALCVVAAIVGISFAAGYIIGKLIL*
Ga0137370_108578621	3300012285	Vadose Zone Soil	AVRQTWGERLAVFVFALALLAAIVGVSFAAGYIIGRLIL*
Ga0137387_107515671	3300012349	Vadose Zone Soil	VRQTWGQRLAVFAFALALMAGIVGVSFAAGYIIGRLIL*
Ga0137372_100070779	3300012350	Vadose Zone Soil	VRQTWGQRLAVFTFALALLAGIVGVSFAAGYIIGKLIL*
Ga0137372_100332386	3300012350	Vadose Zone Soil	VRQSWGERLAVFAFALAVLAAIVGASFAAGYIIGKLIL*
Ga0137372_103310212	3300012350	Vadose Zone Soil	MRQTWGERVAVFVFALALLAAIVGVSFAAGYIIGKLIL*
Ga0137367_112134562	3300012353	Vadose Zone Soil	VRQSWGERLAVFAFALAVLAAIVGFSFAAGYIIGKLIL*
Ga0150984_1101547861	3300012469	Avena Fatua Rhizosphere	VRQTWGERLAVFAFALALLAGLVGVTFAAGYIIGRLIL*
Ga0157288_102730552	3300012901	Soil	VRQTWRERLEVFTFGLALLAGIVGVSFAAGYIIGKLIL*
Ga0157291_102243852	3300012902	Soil	VRQTWGDRLVVFAFALGLIAAIVGISFGAGYIIGRLIL*
Ga0137394_115531652	3300012922	Vadose Zone Soil	VQSWKERLAVFGFALAVITAIVVVAFAAGYIIGKLIL*
Ga0164299_108124791	3300012958	Soil	VHGWGERLGVLAFALALLAGLVGLSFAAGYIIGKLIL*
Ga0164302_116743562	3300012961	Soil	VRQTWGERLAVFTFALFLLAAIVGISFAAGYIIGKLIL*
Ga0134077_101491043	3300012972	Grasslands Soil	VVQQTWGERVAVFAFALALLAGIIGVTFAAGYIIGRLIL*
Ga0164309_116062172	3300012984	Soil	VQSWKERLAVFAFALAFITAIVLGAFAAGYIIGKL
Ga0157374_121349262	3300013296	Miscanthus Rhizosphere	VRGWSDRLSVLGFAFALVLALVGLSFAVGYIIGKLIL*
Ga0120154_10218362	3300013501	Permafrost	VHTWGERLAIFAFALAVVAAIVVAAFAAGYIIGKLIL*
Ga0137403_107278663	3300015264	Vadose Zone Soil	SWKERLAVFAFALAVITAIVVVAFAAGYIIGKLIL*
Ga0182005_11181272	3300015265	Rhizosphere	VQQTWGERLAVFVFALALLAGLVGVTFAAGYIIGRLFL*
Ga0134089_104456282	3300015358	Grasslands Soil	VRQTWGQRLAVFAFALALLAGIVGVSFAAGYIIGRLIL*
Ga0132258_113294921	3300015371	Arabidopsis Rhizosphere	VRQTWGDHLVVFAFALGLIAAIVGISSGAGYIIGRLIL*
Ga0132258_124375764	3300015371	Arabidopsis Rhizosphere	VRHTWGERVAVFVFAIALVAAIVGASFAAGYIIGRLIL*
Ga0132258_139643162	3300015371	Arabidopsis Rhizosphere	VRQTWGERLAVFVFALALLAGLVGVTFAAGYIIGRLIL*
Ga0132256_1025560982	3300015372	Arabidopsis Rhizosphere	VQQTWGERLAVFAFALAILAGLVGATFAAGYIIGRLIL*
Ga0132257_1024081072	3300015373	Arabidopsis Rhizosphere	VRQTWGERLAVFTFALFLLAAIVGISFAAGYIIGRLIL*
Ga0132257_1039345632	3300015373	Arabidopsis Rhizosphere	NPAVQGWSERLAVLAFALALLAAFVGLSFAVGYIIGKLIL*
Ga0132257_1045267492	3300015373	Arabidopsis Rhizosphere	VRQSWGDRLVVFAFALGVIAAIVGISFGAGYIIGRLIL*
Ga0184605_101169583	3300018027	Groundwater Sediment	VRQTWGQRLAVFAFALALLAGIVGVSFAAGYIIGRLLL
Ga0184619_103388962	3300018061	Groundwater Sediment	VHSWGERLAVLAFALALLGAIVGLFFTAGYIIGKLIL
Ga0184618_101370283	3300018071	Groundwater Sediment	VRQTWGERLAVFAFALALIAGIVGVSFAAGYIIGRLIL
Ga0184635_101630212	3300018072	Groundwater Sediment	VRQTWGQRLAVFAFALALLAGIVGVSFAAGYIIGKLIL
Ga0066655_109484582	3300018431	Grasslands Soil	VQQTWGERLAVFVFALALLAGIIGVTFAAGYIIGRLIL
Ga0066662_105254601	3300018468	Grasslands Soil	VRQTWGERLAVFTFALAVVAAIVAISFAAGYIIGKLI
Ga0066662_111511052	3300018468	Grasslands Soil	VRQSWGERLAVFAFALAVVAAIVGVAFAAGYIIGRLIL
Ga0222622_101439802	3300022756	Groundwater Sediment	VRQTWGDRLAVFAFGLCVVAAIVGISFAAGYIIGKLIL
Ga0247672_10461102	3300024187	Soil	MQQTWGQRLAVFAFAFAILAGVVGVTFAAGYIIGRLIL
Ga0137417_14103473	3300024330	Vadose Zone Soil	VQSWKERLAVFGFALGLITAIVVVAFAAGYIIGKLIL
Ga0207693_114757082	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VQSWKERLAVFAFALAFITAIVLGAFAAGYIIGKLIL
Ga0207664_108238393	3300025929	Agricultural Soil	VRPTWGDRLAVFAFALGVVAAIVGISFGAGYIIGRLIL
Ga0207670_109683372	3300025936	Switchgrass Rhizosphere	VRQTWGDRLAVFTFALFLLAAIVGISFAAGYIIGRLIL
Ga0207665_105022963	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VQQTWGERLAVFAFALALLAGLVGAMFAAGYIIGRLIL
Ga0207658_115952012	3300025986	Switchgrass Rhizosphere	VRQTWGERLAVFVFALALLAGLVGVTFAAGYIIGRLIL
Ga0207708_108103531	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VRQTWGDRLVVFAFALGLIAAIVGISFGAGYIIGRLIL
Ga0209761_11494411	3300026313	Grasslands Soil	VRQTWGERLAVFTFALAVVAAIVGISFAAGYIIGKLIL
Ga0209470_12783912	3300026324	Soil	VRQTWGQRLAVFAFALALLAGIVGVSFAAGYIIGRLIL
Ga0209690_11048521	3300026524	Soil	KVRQSWGERLAVFAFALAVVAAIVGVAFAAGYIIGRLIL
Ga0209474_106321141	3300026550	Soil	VRQSWGDRIAVFAFALAVVAAIVGISFAAGYIIGKLIL
Ga0209811_103054782	3300027821	Surface Soil	MHQTWGERLAVFAFAFLLLAGVVGVTFAAGYIIGRLIL
Ga0209701_102081572	3300027862	Vadose Zone Soil	VRQSWGERLAVLAFALALVGAIVGVAFAAGYIIGKLIL
Ga0209465_106693701	3300027874	Tropical Forest Soil	VRPTWGDRLAVFAFALGVVVAIVGISFGAGYIIGRLIL
Ga0209590_100019724	3300027882	Vadose Zone Soil	VRQSWGERLAVFAFALAVVAAIVGVAFAAGYIIGKLIL
Ga0209590_101329333	3300027882	Vadose Zone Soil	VRQTWGQRLAVFAFALALIAGIVGVSFAAGYIIGRLIL
Ga0209168_100107293	3300027986	Surface Soil	MRTTWGERLAVFAFALAVVAAIVGAAFAAGYIIGRLIL
Ga0307318_101100822	3300028744	Soil	VRQTWRDRLAVFAFGLCVVAAIVGISFAAGYIIGKLIL
Ga0307310_107553491	3300028824	Soil	VHSWRERLAIFAFALAVVAAIVGGAFAAGYIIGKLIL
Ga0307312_106385081	3300028828	Soil	VRQTWGQRLAVFAFALALIAGIVGVSFAAGYIIGR
Ga0307278_102588552	3300028878	Soil	VQGWGDRLAVLGFALALLAAFVGLSFTVGYIIGKLIL
Ga0307304_105549151	3300028885	Soil	VRQTWGERLAVFVFALALLAAIVGVSFAAGYIIGRLLL
Ga0318516_108104892	3300031543	Soil	MHQTWGQRLAVFAFALAILAGVVGVTFAAGYIIGRLIL
Ga0307408_1015333392	3300031548	Rhizosphere	VQTWGERLTVLAFALALLVAFVGLSFAAGYIIGRLIL
Ga0306925_119610191	3300031890	Soil	VRHTWGERVAVFAFAIALVAAIVGASFAAGYIIGRLI
Ga0308175_1002062092	3300031938	Soil	VQQTWGERLAVFVFALAILAGLVGVTFAAGYIIGRLIL
Ga0308176_123267952	3300031996	Soil	VRGWGDRLSVLGFALALIGAIVGLSFAAGYIIGKLIL
Ga0335084_106183073	3300033004	Soil	MRTTWGERLSVFAFALLVVAAIVGAAFAAGYIIGRLIL