Metagenome / Metatranscriptome Family F060686

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060686
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	113 residues
Representative Sequence	MEITTLIAAVAAFGLPCTEPELRDFPAQQMPWPAAYVRSIEGHNIIALREGTRDDSQRLPRVLVHELLHCGLYEDRERRGQPHPRSLDPREEMAVQAMTDVVLSRLSEN
Number of Associated Samples	84
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.55 %
% of genes near scaffold ends (potentially truncated)	28.79 %
% of genes from short scaffolds (< 2000 bps)	82.58 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.88

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.606 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil (19.697 % of family members)
Environment Ontology (ENVO)	Unclassified (40.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.848 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.61% β-sheet: 11.68% Coil/Unstructured: 46.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.88
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.88
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SCOP family	SCOP domain	Representative PDB	TM-score
d.92.1.13: Zn aminopeptidase catalytic domain	d3u9wa2	3u9w	0.71499
d.92.1.13: Zn aminopeptidase catalytic domain	d1z1wa2	1z1w	0.7145
d.92.1.16: Caur0242-like	d3cmna1	3cmn	0.70876
d.92.1.0: automated matches	d6q4ra2	6q4r	0.70318
d.92.1.4: Neutral endopeptidase (neprilysin)	d6suka_	6suk	0.66129

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF12680	SnoaL_2	8.33
PF03100	CcmE	4.55
PF08530	PepX_C	3.03
PF13360	PQQ_2	2.27
PF12833	HTH_18	2.27
PF00072	Response_reg	1.52
PF13191	AAA_16	1.52
PF13561	adh_short_C2	1.52
PF03284	PHZA_PHZB	1.52
PF05170	AsmA	1.52
PF13975	gag-asp_proteas	0.76
PF13185	GAF_2	0.76
PF01814	Hemerythrin	0.76
PF13533	Biotin_lipoyl_2	0.76
PF01799	Fer2_2	0.76
PF01625	PMSR	0.76
PF02738	MoCoBD_1	0.76
PF03466	LysR_substrate	0.76
PF00126	HTH_1	0.76
PF13365	Trypsin_2	0.76
PF00561	Abhydrolase_1	0.76
PF08450	SGL	0.76
PF03886	ABC_trans_aux	0.76
PF02371	Transposase_20	0.76
PF07978	NIPSNAP	0.76
PF14552	Tautomerase_2	0.76
PF07045	DUF1330	0.76
PF03459	TOBE	0.76
PF00486	Trans_reg_C	0.76
PF02615	Ldh_2	0.76
PF13180	PDZ_2	0.76
PF00578	AhpC-TSA	0.76
PF13091	PLDc_2	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	4.55
COG2936	Predicted acyl esterase	General function prediction only [R]	3.03
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	1.52
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.76
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.76
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
All Organisms	root	All Organisms	39.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
cellular organisms	root	All Organisms → cellular organisms	39.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.79 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	3.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.03 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.03 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.52 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.03 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.03 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.03 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.03 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.76 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.03 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.03 %
unclassified Burkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia	0.76 %
Paracoccus laeviglucosivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus laeviglucosivorans	0.76 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.03 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.03 %
Burkholderia sp. D7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. D7	0.76 %
Paracoccus laeviglucosivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus laeviglucosivorans	0.76 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101577245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1134	Open in IMG/M
3300002907\|JGI25613J43889_10011646	All Organisms → cellular organisms → Bacteria → Proteobacteria	2443	Open in IMG/M
3300004463\|Ga0063356_104334002	Not Available	610	Open in IMG/M
3300005328\|Ga0070676_11299871	Not Available	555	Open in IMG/M
3300005332\|Ga0066388_100010342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7233	Open in IMG/M
3300005332\|Ga0066388_103526996	Not Available	799	Open in IMG/M
3300005332\|Ga0066388_104315354	Not Available	725	Open in IMG/M
3300005440\|Ga0070705_101194019	Not Available	626	Open in IMG/M
3300005445\|Ga0070708_100556016	Not Available	1082	Open in IMG/M
3300005549\|Ga0070704_100956967	Not Available	773	Open in IMG/M
3300005549\|Ga0070704_101675913	Not Available	587	Open in IMG/M
3300005764\|Ga0066903_103019735	Not Available	911	Open in IMG/M
3300005844\|Ga0068862_102339376	Not Available	546	Open in IMG/M
3300006844\|Ga0075428_100159469	All Organisms → cellular organisms → Bacteria	2449	Open in IMG/M
3300006845\|Ga0075421_100082190	All Organisms → cellular organisms → Bacteria → Proteobacteria	4063	Open in IMG/M
3300009101\|Ga0105247_10956781	Not Available	665	Open in IMG/M
3300009553\|Ga0105249_11697093	Not Available	704	Open in IMG/M
3300010043\|Ga0126380_12012305	Not Available	529	Open in IMG/M
3300010046\|Ga0126384_10238309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1463	Open in IMG/M
3300010046\|Ga0126384_11643431	Not Available	606	Open in IMG/M
3300010047\|Ga0126382_12083095	Not Available	542	Open in IMG/M
3300010154\|Ga0127503_10990739	Not Available	598	Open in IMG/M
3300010329\|Ga0134111_10079132	Not Available	1236	Open in IMG/M
3300010362\|Ga0126377_12470203	Not Available	595	Open in IMG/M
3300010366\|Ga0126379_10235827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1790	Open in IMG/M
3300010366\|Ga0126379_12344459	Not Available	634	Open in IMG/M
3300010400\|Ga0134122_11039505	Not Available	806	Open in IMG/M
3300010403\|Ga0134123_11375476	Not Available	745	Open in IMG/M
3300011405\|Ga0137340_1117288	Not Available	511	Open in IMG/M
3300011417\|Ga0137326_1052651	Not Available	888	Open in IMG/M
3300011432\|Ga0137428_1158746	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012203\|Ga0137399_11113262	Not Available	665	Open in IMG/M
3300012203\|Ga0137399_11558092	Not Available	548	Open in IMG/M
3300012362\|Ga0137361_10352284	Not Available	1351	Open in IMG/M
3300012582\|Ga0137358_10536825	Not Available	787	Open in IMG/M
3300012672\|Ga0137317_1006587	Not Available	915	Open in IMG/M
3300012685\|Ga0137397_10023795	All Organisms → cellular organisms → Bacteria	4328	Open in IMG/M
3300012918\|Ga0137396_10672257	Not Available	764	Open in IMG/M
3300012918\|Ga0137396_11239107	Not Available	523	Open in IMG/M
3300012923\|Ga0137359_10058215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3365	Open in IMG/M
3300012925\|Ga0137419_10141097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1728	Open in IMG/M
3300012927\|Ga0137416_10625870	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300012927\|Ga0137416_11269007	Not Available	665	Open in IMG/M
3300012929\|Ga0137404_10010294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6454	Open in IMG/M
3300012929\|Ga0137404_10072746	All Organisms → cellular organisms → Bacteria → Proteobacteria	2704	Open in IMG/M
3300012929\|Ga0137404_11186189	Not Available	702	Open in IMG/M
3300012929\|Ga0137404_12141451	Not Available	523	Open in IMG/M
3300012930\|Ga0137407_10718525	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300012930\|Ga0137407_11418507	Not Available	660	Open in IMG/M
3300012944\|Ga0137410_10186094	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300012944\|Ga0137410_10307211	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300012948\|Ga0126375_10161418	Not Available	1426	Open in IMG/M
3300013297\|Ga0157378_11929869	Not Available	640	Open in IMG/M
3300014968\|Ga0157379_10156514	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300014968\|Ga0157379_11635167	Not Available	630	Open in IMG/M
3300014968\|Ga0157379_11764285	Not Available	607	Open in IMG/M
3300014968\|Ga0157379_11970582	Not Available	577	Open in IMG/M
3300015052\|Ga0137411_1000928	Not Available	652	Open in IMG/M
3300015245\|Ga0137409_10005417	All Organisms → cellular organisms → Bacteria → Proteobacteria	13304	Open in IMG/M
3300015264\|Ga0137403_10033785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5388	Open in IMG/M
3300015371\|Ga0132258_10097525	All Organisms → cellular organisms → Bacteria	6912	Open in IMG/M
3300015371\|Ga0132258_10411091	All Organisms → cellular organisms → Bacteria	3364	Open in IMG/M
3300015371\|Ga0132258_13234313	Not Available	1123	Open in IMG/M
3300015373\|Ga0132257_103709894	Not Available	556	Open in IMG/M
3300017939\|Ga0187775_10132026	Not Available	872	Open in IMG/M
3300017944\|Ga0187786_10173770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	798	Open in IMG/M
3300017947\|Ga0187785_10604300	Not Available	563	Open in IMG/M
3300017966\|Ga0187776_10018340	All Organisms → cellular organisms → Bacteria → Proteobacteria	3811	Open in IMG/M
3300017966\|Ga0187776_10024341	Not Available	3332	Open in IMG/M
3300017966\|Ga0187776_10208898	Not Available	1231	Open in IMG/M
3300017966\|Ga0187776_11269563	Not Available	555	Open in IMG/M
3300018064\|Ga0187773_10051725	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1893	Open in IMG/M
3300018071\|Ga0184618_10284713	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300019360\|Ga0187894_10291404	Not Available	757	Open in IMG/M
3300020061\|Ga0193716_1118235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1110	Open in IMG/M
3300021090\|Ga0210377_10210809	Not Available	1232	Open in IMG/M
3300021178\|Ga0210408_10145876	Not Available	1873	Open in IMG/M
3300021178\|Ga0210408_10964419	Not Available	661	Open in IMG/M
3300021432\|Ga0210384_11613972	Not Available	554	Open in IMG/M
3300025900\|Ga0207710_10505906	Not Available	627	Open in IMG/M
3300026035\|Ga0207703_10689744	Not Available	971	Open in IMG/M
3300026319\|Ga0209647_1004834	All Organisms → cellular organisms → Bacteria → Proteobacteria	10025	Open in IMG/M
3300027909\|Ga0209382_10473417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus laeviglucosivorans	1384	Open in IMG/M
3300027915\|Ga0209069_11020288	Not Available	509	Open in IMG/M
3300027950\|Ga0209885_1041113	Not Available	527	Open in IMG/M
3300028536\|Ga0137415_10116504	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300031720\|Ga0307469_10026076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3292	Open in IMG/M
3300031720\|Ga0307469_10125475	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300031720\|Ga0307469_10143991	All Organisms → cellular organisms → Bacteria → Proteobacteria	1771	Open in IMG/M
3300031720\|Ga0307469_10195584	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300031720\|Ga0307469_10540569	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300031720\|Ga0307469_10616112	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	972	Open in IMG/M
3300031720\|Ga0307469_11495408	Not Available	646	Open in IMG/M
3300031740\|Ga0307468_100379304	Not Available	1069	Open in IMG/M
3300031740\|Ga0307468_100682029	Not Available	855	Open in IMG/M
3300031740\|Ga0307468_100791252	Not Available	807	Open in IMG/M
3300031820\|Ga0307473_10107858	Not Available	1500	Open in IMG/M
3300031820\|Ga0307473_10255096	Not Available	1078	Open in IMG/M
3300031820\|Ga0307473_10366535	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	932	Open in IMG/M
3300031820\|Ga0307473_11345083	Not Available	536	Open in IMG/M
3300031912\|Ga0306921_11350621	Not Available	786	Open in IMG/M
3300032174\|Ga0307470_10713756	Not Available	766	Open in IMG/M
3300032180\|Ga0307471_100386859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1522	Open in IMG/M
3300032180\|Ga0307471_100423909	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300032180\|Ga0307471_100427488	Not Available	1459	Open in IMG/M
3300032180\|Ga0307471_100747058	All Organisms → cellular organisms → Bacteria → Proteobacteria	1144	Open in IMG/M
3300032180\|Ga0307471_100942955	Not Available	1030	Open in IMG/M
3300032180\|Ga0307471_101166042	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300032180\|Ga0307471_102950058	Not Available	604	Open in IMG/M
3300032180\|Ga0307471_103025013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. D7	596	Open in IMG/M
3300032180\|Ga0307471_103219126	Not Available	579	Open in IMG/M
3300032205\|Ga0307472_100328759	All Organisms → cellular organisms → Bacteria → Proteobacteria	1244	Open in IMG/M
3300032205\|Ga0307472_102474639	Not Available	528	Open in IMG/M
3300032261\|Ga0306920_101987629	Not Available	815	Open in IMG/M
3300032770\|Ga0335085_10004835	All Organisms → cellular organisms → Bacteria → Proteobacteria	22024	Open in IMG/M
3300032770\|Ga0335085_10288438	All Organisms → cellular organisms → Bacteria → Proteobacteria	1952	Open in IMG/M
3300032770\|Ga0335085_11614501	Not Available	671	Open in IMG/M
3300032782\|Ga0335082_10007219	All Organisms → cellular organisms → Bacteria → Proteobacteria	12088	Open in IMG/M
3300032782\|Ga0335082_11360403	Not Available	580	Open in IMG/M
3300032783\|Ga0335079_10049271	All Organisms → cellular organisms → Bacteria → Proteobacteria	4826	Open in IMG/M
3300032828\|Ga0335080_10040283	All Organisms → cellular organisms → Bacteria → Proteobacteria	5136	Open in IMG/M
3300032954\|Ga0335083_10709241	Not Available	816	Open in IMG/M
3300032955\|Ga0335076_10678558	Not Available	912	Open in IMG/M
3300033004\|Ga0335084_10126233	All Organisms → cellular organisms → Bacteria → Proteobacteria	2660	Open in IMG/M
3300033158\|Ga0335077_10442786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1386	Open in IMG/M
3300033158\|Ga0335077_10715647	Not Available	1029	Open in IMG/M
3300033158\|Ga0335077_12157586	Not Available	513	Open in IMG/M
3300033433\|Ga0326726_11316547	Not Available	703	Open in IMG/M
3300033806\|Ga0314865_190130	Not Available	550	Open in IMG/M
3300034354\|Ga0364943_0100887	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300034354\|Ga0364943_0191217	Not Available	750	Open in IMG/M
3300034417\|Ga0364941_023273	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1276	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.61%
Host-Associated	Host-Associated	14.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.55%
Plants	Host-Associated → Plants	14.39%
Aquatic	Environmental → Aquatic	6.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.30%
Sediment	Environmental → Aquatic → Sediment	4.55%
Floodplain	Environmental → Terrestrial → Floodplain	2.27%
Freshwater	Environmental → Aquatic → Freshwater	1.52%
Peat	Environmental → Terrestrial → Peat	0.76%
Cave	Environmental → Terrestrial → Cave	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	6.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.03%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	19.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.06%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.06%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.76%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.76%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.76%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012672	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT266_2	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027950	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015772453	3300000364	Soil	MEITTLIAAVAAFGLPCTDPELRDFPVQQMPWPAAYVRSIEGHNIIALREGTRDDSQRLPRVLVHELLHCGLYEDRERRGQPHPRSLDQREEMAVQAMTDVVLRRLSENRGL*
JGI25613J43889_100116463	3300002907	Grasslands Soil	MELTTLIAAVAVFGLPCTNPELRDYTTEELPWPAAYIRSDEGRNIIALRDGVRNDTEHLPRILVHELVHCGLFEDRERRGQPHPRSLDLREEMVVKEITDLVLKRLNESRHG*
Ga0063356_1043340022	3300004463	Arabidopsis Thaliana Rhizosphere	MELSTLVAAVAAFGLPCSNPELRDLAVNEIAWPAAYVRSSEGHNIIALRAGTRDDPQRLSRILVHELLHCGLYEDRERRGRRHPPSADPREEMIVQE
Ga0070676_112998711	3300005328	Miscanthus Rhizosphere	MEIATLLAAVAAFGLPCSNPSLRDYPAEQMPWPAAYIRSIEGQNIIALREGIRNDTQRLRKILVHELLHCGLYEDRERRGLPRLLSLDPREEIAVHAMTDVVLRRVNGTGREGGA*
Ga0066388_1000103427	3300005332	Tropical Forest Soil	MEIATLLAAVAAFGLPCTNPELRDIPAEDMPWPAAYVRSIEGRNIIALREGIREDARLPKILVHELLHCGLYEERDRRGQPQPHSLDPREEMSVQAMTDVVLKRLPELVAGAQAQAAGVRY*
Ga0066388_1035269961	3300005332	Tropical Forest Soil	MEITTLIAAVAAFGLPCTEPELRDFPVQQMPWPAAYVRSIEGHNIIALREGTRDDSQRLPRVLVHELLHCGLYEDRERRGQAHPRSLDPREEMAVQEMTDVVLKRLSEN*
Ga0066388_1043153541	3300005332	Tropical Forest Soil	VEITTLIAAVAAFGLPCTEPELRDFPAQQMPWPAAYVRSIEGQNIIALREGTRDDPQHLPRVLVHELLHCGLYEDRQRRGQAHPRSLDPREEMAVQAMTDVVLRRLSEK*
Ga0070705_1011940192	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	SGYMDISTLIAAVAAFGLPCSNPELRDYSTEELSWPAAYVRTIEGHNIIALRDDIRDDAQRLPRILVHELLHCGLYEDRERRGQPQPPSLDPREEMAVQAMTDVVLRRLNGI*
Ga0070708_1005560162	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MELATLLAAVAAFGLPCSNPELRDYTAEDLPWPAAYIRTIEGRNIIALRTDIGNETQRLPRIIVHELLHCGLYEERERRGQPHPRYLDPREEMAVNEMTD
Ga0070704_1009569672	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDISTLIAAVAAFGLPCSNPELRDYSTEELSWPAAYVRTIEGHNIIALRDDIRDDAQRLPRILVHELLHCGLYEDRERRGQPQPPSLDPREEMAVQAMTDVVLRRLNGI*
Ga0070704_1016759131	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MEITTLLAAVAALGLPCSNPELRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDETQRLPTILVHELLHCGLYEDRERRGQPHPLSLDPRE
Ga0066903_1030197352	3300005764	Tropical Forest Soil	MEITTLVAAVAAFGLPCTEPELRDFPAQQMPWPAAYVRSIEGHNIIALREGTRDDSQRLPRVLVHELLHCGLYEDRERRGQAHPRSLDPREEMAVQAMTDVVLRRLSEN*
Ga0068862_1023393761	3300005844	Switchgrass Rhizosphere	MEIAALIAAVAAFGLPCSNPEVRDYPAEEMSWPAAYVRTIEGQNIIALREGIKEDAQHLPRILVHELLHCGLYEDRERRGQPQPLSLDPREEMAVHAMTDVVLKRLDEIGREKGA*
Ga0075428_1001594693	3300006844	Populus Rhizosphere	MDITTLLAAVAAFGLPCSNPELRDIPSHVMPWPAAYVRSIQGNNIIALRAGTRDDAQHLPKILLHELLHCGLYEDRERRGQPHPRSLDPREEMAVQAMTDAVLMRVSKTAYATGG*
Ga0075421_1000821904	3300006845	Populus Rhizosphere	MDITTLLAAVAAFGLPCSNPELRDIPSHAMPWPAAYVRSIQGNNIIALRAGTRDDAQRLPRILLHELLHCGLYEDRERRGQPHPRSLDPREEMAVQAMTDAVLMRVSKTAYATGG*
Ga0105247_109567811	3300009101	Switchgrass Rhizosphere	MEIATLLAAVAALGLPCSNPELRDFPAEQMRWPAAYVRTTEGHNIIALREGTRDETQRLPRILVHELLHCGMYEDRERRGQPHPLSLDLREEMAVQAMTDVVLNRLDGSRVGGAG*
Ga0105249_116970931	3300009553	Switchgrass Rhizosphere	MEIATLLAAVAALGLPCSNPELRDFPAEQMPWPAAYVRTIEGHNIIALRDDIRDDAQRLPRILVHELLHCGLYEDRERRGQPQPPSLDPREEMAVQAMTDVVLRRLNGI*
Ga0126380_120123052	3300010043	Tropical Forest Soil	TTLVTAVAAFGLPCTEPELRDFPAQQMPWPAAYVRSIEGHNIIALREGTRDDSQRLPRVLVHELLHCGLYEDRERRGQAHPRSLDPREEMAVQAMTDVVLRRLSEN*
Ga0126384_102383092	3300010046	Tropical Forest Soil	VDIVTLIAAVAAFGLPCSDPELRDFPAQEMPWPAAYMRSIEGHNIIALRDDTRDDAQRLQRILVHELLHCGLYEDRERRGQPHPRSLDPREEMAVHAMTDVVLKRLNGNGRE*
Ga0126384_116434312	3300010046	Tropical Forest Soil	ATLLALAERNGVRLPASTEPELRDFPVQQMPWPAAYVRSIEGHNIIALREGTRDDSQRLPRVLVHELLHCGLYEDRERRGQAHPRSLDPREEMAVQAMTDVVLRRLSEN*
Ga0126382_120830951	3300010047	Tropical Forest Soil	MEIATLLAAVAAFGLPCSNHELRDFPAQDMPWPAAYVRSIDGHNIIALREGIREDSRLPKILIHELLHCGLYEQRDRRGQPQPASLDPREEMAVQAMTDVVLKRLPELAAAAEAPTTVVRY*
Ga0127503_109907392	3300010154	Soil	DAGDRVMEIATLIAAVAAFGLPCSNPEVRDYPAEEMSWPAAYVRTIEGHNIIALRNDIRDDAQRLPRILVHELLHCGLYEDRERRGQPQPPSLDPREEMAVQAMTDVVLRRLNGI*
Ga0134111_100791322	3300010329	Grasslands Soil	MDLATLIAAVAAFGLSCSNPELRDYPAEELPWPAAYIRSMEGHNIIALRQGIRNDTQRLPKIIVHELLHCGLYEARERREQPHSRSLDPREEMAVIEMTDIVLGRLRETGRG*
Ga0126377_124702031	3300010362	Tropical Forest Soil	MEITTLIAAVAAFGLPCTEPELRDFPAQQMPWPAAYVRSIEGHNIIALREGTRDDSQRLPRVLVHELLHCGLYEDRERRGQPHPRSLDPREEMAVQAMTDVVLSRLSEN*
Ga0126379_102358271	3300010366	Tropical Forest Soil	MSVQTFTHRFWTPEDLMEITTLVAAVAAFGLPCTEPELRDFPAQQMPWPAAYVRSIEGHNIIALREGTRDDSQRLPRVLVHELLHCGLYEDRERRGQAHPRSLDPREEMAVQAMTDVVLRRLSEN*
Ga0126379_123444591	3300010366	Tropical Forest Soil	MEIATLLAAVAAFGLPCSNPELRDFPAQDMPWPAAYVRSVDGHNIIALREGIREDSRLPKILIHELLHCGLYEQRDRRGQPQPASLDPREEMAVQAMTDVVLKRLPELAAAA
Ga0134122_110395051	3300010400	Terrestrial Soil	MEIATLLAAVAALGLPCSNPELRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDEPQRLPRILVHELLHCGLYEDRERRGQPHPLSLDRREEMAVQAMTDVVLERLNVSRFEGTG*
Ga0134123_113754762	3300010403	Terrestrial Soil	MEIATLIAAVAAFGLPCSNPELRDYSAEEMSWPAVYVRTIEGKNIIALREGIKEDAQHLPRILVHELLHCGLYEERERRGQPQPPSLNPREEMAVHAMTDVVLKRLDEIGREKAA*
Ga0137340_11172881	3300011405	Soil	MDIATLIAAVAAFGLPCTNPELRDYPAKEMPWPAAYVRDIEGQNIIVLREGVSSDMHRLPRILVHELLHCGLYEDRERRGQPHSRSLDPREEMAVHVMTDVVLKRLNENGRGVAQTPGSDLHLAINQRKEIER*
Ga0137326_10526512	3300011417	Soil	MELTTLIAAVAAFGLPCSNPQLRDYPAEELPWPAAYIRSVEGHNVIALRRGIRNESQRPPKILVHELLHCGLYEDQERRGQPHPRSLDPREEMAVNAMTDVVLGQLHETRRG*
Ga0137428_11587461	3300011432	Soil	MDIATLIAAVAAFGLPCTNPELRDYPAKEMPWPAAYVRDIEGQNIIVLREGVSSDMHRLPRILVHELLHCGLYEDRERRGQPHSRSLDPREEMA
Ga0137399_111132621	3300012203	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDYAAEELPWPAAYIRSIEGHNIIALRQGIRNDTQRLPRLLVHELLHCGLYEARERRGQPHPRSLDPLEEIAVIEMTDAVLERLHETGRG*
Ga0137399_115580921	3300012203	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDYPAEELPWPAAYIRSMEGHNIIALRQGIRNDTQRLPEIIVHELLHCGLYEARERREQPHPRSLDPREEMVVIEM
Ga0137361_103522843	3300012362	Vadose Zone Soil	MDLATLIAAVAAFGLPCSNPELRDYPAEELPWPAAYIRSMEGHNIIALRQGIRNDTQRLPEIIVHELLHCGLYEARERREQPHPRSLDPREEMAVIEMTDIVLGRLRETGRG*
Ga0137358_105368251	3300012582	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDFPAEELPWPAAYIRSMEGHNIIALRQGNDTQRLPKIIVHELLHCGLYEARERREQPHPRSLDPREEMAVNEMTEVVLWRLN
Ga0137317_10065872	3300012672	Soil	MELTTLIAAVAAFGLPCSNPELRDYAAEELPWRAAYIRSMEGHNIIALRRGIRNESQRLPKILVHELLHCGLYEDRERRGQPHPRSLDPREEMAVNAMTDVVLGQLHETRRG*
Ga0137397_100237952	3300012685	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDYPAEELPWPAAYIRSIDGHNIIALRRGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREERAVNEMTDVVLGRLHETGRG*
Ga0137396_106722571	3300012918	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDYPAEELPWPAAYIRSIDGHNIIALRRGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREEMAVNEMTEVVLWRLNETRRG*
Ga0137396_112391072	3300012918	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDYPAEELPWPAAYIRAMEGHNIIALRQGIRNDTQRLPEIIVHELLHCGLYEARERREQPHPRSLDPREEMAVIEMTDIVLGRLRETGRG*
Ga0137359_100582156	3300012923	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDFPAEELPWPAAYIRSIDGHNIIALRWGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREEMAVNEMTD
Ga0137419_101410971	3300012925	Vadose Zone Soil	MDLATLIAAVAAFGLPCSNPELRDYPAEELPWPAAYIRAMEGHNIIALRQGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREEMAVNEMTDVVLGRLHETGRG*
Ga0137416_106258702	3300012927	Vadose Zone Soil	MELATLIAAVAAFGLPCSNPELRDYAAEELRWPAAYIRSIEGHNIIALRRGIRNDTQRLPRLLVHELLHCGLYEARERRGQPQPRSLDPREEMAVIEMTDVVLGRLHETGHG*
Ga0137416_112690072	3300012927	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDFPAEELPWPAAYIRSIDGHNIIALRQGIRNDTQRLPRIIVHELLHCGLYEARERREQPHPRSLDPRE
Ga0137404_100102943	3300012929	Vadose Zone Soil	MELTTLIAAVAVFGLPCSNPELRDYTAKELPWPAAYIRSDEGRNIIALRDGVRNDTEHLPRILVHELLHCGLFEDRERRGQPHPHSLDLREEMVVMEMTDLVLGRLNERRHG*
Ga0137404_100727462	3300012929	Vadose Zone Soil	MDLATLITAVAAFGLPCSNPELRDYPAEELPWPAAYIRSMEGHNIIALRQGNDTQRLPKIIVHELLHCGLYEARERREQPHPRSLDPREEMAVIEMTDIVLGRLRETGRG*
Ga0137404_111861891	3300012929	Vadose Zone Soil	MDISPLIAAVAAFGLPCSNPELRDYPPEDLPWPAAYVRSIDGHNVIALRGGIRDDMQRLPKILVHELLHCGLYEDRQRRGQPQPRSLDPREEIAVQAMTEAVLKRLNGSSRESTGD
Ga0137404_121414511	3300012929	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDFPAEELPWPAAYIRSIDGHNIIALRRGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREEMAVNEMTDVVLGRLNETRRG*
Ga0137407_107185252	3300012930	Vadose Zone Soil	MDLATLIAAVAAFGLPCSNPELRDYPAEELPWPAAYIRSIDGHNIIALRQGIRNDTQRLPRLLVHELLHCGLYEARERRGQPHPRSLDPREEMAVIEMTDAVLERLHETGRG*
Ga0137407_114185072	3300012930	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDFPAEELPWPAAYIRSIDGHNIIALRRGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREEMAVNEMTDVVLGRLHETGRG*
Ga0137410_101860942	3300012944	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDYPAEELPWPAAYIRSIDGHNIIALRRGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREEMAVNEMTDVVLGRLNETGRG*
Ga0137410_103072112	3300012944	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDYPAQDMPWPAAYVRSIDGHNIIALREGMSDDAQRLPKILVHELLHCGLYEDRERRGQPQPRSLDPREEMAVHAMTDAVLKRLNETGREGAA*
Ga0126375_101614182	3300012948	Tropical Forest Soil	MIGQTFNHQFWRLEGLMEITTLIAAVAAFGLPCTDPELRDLPVQQMPWPAAYIRSIEGHNIIALREGTRDDSQRLPRVLVHELLHCGLYEDRERRGQPHPRSLDPREEMEVQAMTDVVLSRLSEN*
Ga0157378_119298691	3300013297	Miscanthus Rhizosphere	MEIATLLAAVAALGLPCSNPELRDFPAEQMPWPAAYVRTSEGHNLIALREGTRDETQRLPRILVHELLHCGLYEDRERRGQPHPLSLDPREEMAVQAMTDVVLNRLDGSRVGGAG*
Ga0157379_101565143	3300014968	Switchgrass Rhizosphere	MELATLLAAVAAFGLPCSNPELRDYTAEDLPWPAAYIRTIEGRNIIALRTDIGNETQRLPRIIVHELLHCGLYEERERRGQPHPRYLDPREEMAVNEMTDAVLVRLYEARRR*
Ga0157379_116351671	3300014968	Switchgrass Rhizosphere	MEIATLLAAAAALGLPCSNPELRDFPAEQMAWPAAYVRTIEGHNIIALREGTRDETQRLPRILVHELLYCGLYEDLERRGQPHPLSLDPREEMTVQAMTDVVLKRLDGSRVGGAA*
Ga0157379_117642852	3300014968	Switchgrass Rhizosphere	MEITTLLAAVAALGLPCSNPELRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDETQRLPTILVHELLHCGLYEDRERRGQPHPLSLDPREEMTVQAMTDVVLKRLDGSRVGG
Ga0157379_119705821	3300014968	Switchgrass Rhizosphere	MDRGGFMETMTLIAAVAAFGLPCSNPELRDYPSQDMPWPAAYVRTIEGHNIIALREGTRDDTQRLPRILVHELLHCGLYEDRQRRGQPQPASLDPREEMAVQAMTDVVLKRLN*
Ga0137411_10009282	3300015052	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDFPAEELPWPAAYIRSIDGHNIIALRRGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREEMAVNEMT
Ga0137409_100054178	3300015245	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDFPAEELPWPAAYIRSIDGHNIIALRRGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREEMAVNEMTDVVLGRLNETGRG*
Ga0137403_100337855	3300015264	Vadose Zone Soil	MELTTLIAAVAAFGLPCSNPELRDFPAEELPWPAAYIRSIEGHNIIALRQGIRNDTQRLPKILVHELLHCGLYEARERRGQPHPRSLDPREEMAVIEMTDIVLGRLRETGRG*
Ga0132258_1009752511	3300015371	Arabidopsis Rhizosphere	MDIAILIAAVAAFGLPCSNPQLRDYPAEEVSWPAAYVRTLEGQNIIVLREGMRNDTQRLAKIVVHELLHCGLYEDRERRGQPHLRSLDPREEMAVQEMTDVVLKRLGGNGREQPASTVAAIELVLSEHFSGEMP*
Ga0132258_104110914	3300015371	Arabidopsis Rhizosphere	MEITALIAAVAAFGLPCGNPEVRDFTAEKMPWPAAYIRSIEGQNIIALREGIRNDAQALPRILVHELLHCGLYEDRERRGQRHPLSLDLREEMAVHAMTEVVLKQLNGSVREGAARAAAISPRTIAPA*
Ga0132258_132343131	3300015371	Arabidopsis Rhizosphere	MEIATLLAAVAALGLPCNNPELRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDETQRLPRILVHELLHCGLYEDRERRGQPHPRSLDLREEMAVQAMTDVVLSHLDESRVVGRLLHNGHRDGAARRS*
Ga0132257_1037098941	3300015373	Arabidopsis Rhizosphere	MEITALIAAVAAFGLPCGNPEVRDFTAEKMPWPAAYIRSIEGQNIIALREGIRNDAQALPRILVHELLHCGLYEDRERRGQRHPLSLDLREE
Ga0187775_101320262	3300017939	Tropical Peatland	MEIVSLIAAVAAFGLPCSNPELRDFPAREMPWPAAYIRSIDGHNIILLREGTRDDTQRLPKILVHELLHCGLYEDRERHGQPHPPSLDLREEMAVQ
Ga0187786_101737702	3300017944	Tropical Peatland	MEITILIAAVAAFGLPCTEPELRDFPVQQMPWPAAYIRSIEGHNIIALREGTRDDSRLPRVLVHELLHCGLYEDRERHGQPHPPSLDLREEMAVQAMTDVVLRRLSERGRDGDGRP
Ga0187785_106043002	3300017947	Tropical Peatland	MEITTLIAAVAAFGLPCTAPELRDVPVHEISWPAAYIRSMDGHNIIALREDVKDDSQRLLRIVVHELLHCGLYEDRERRGQAHPRSLDPREEMAVQAMTDVVLR
Ga0187776_100183404	3300017966	Tropical Peatland	MEIVSLIAAVAAFGLPCSNPELRDFPAREMPWPAAYIRSIDGHNIILLREGTRDDTQRLPKILVHELLHCGLYEDRERHGQPHPPSLDLREEMAVQAMTDVVLRRLSERGRDGDGAA
Ga0187776_100243413	3300017966	Tropical Peatland	MDITTLLAAVATFGLPCSSPELRDFPAEQMLWPAAYVRSIEGYNIIALREGTRDDEQQLSRILVHELLHCGLYEDRERRGQPQPRSLDPREEMAVQAMTDLVLKRLSGNGRGQDG
Ga0187776_102088982	3300017966	Tropical Peatland	MEITILVAAVAAFGLPCDNPELREFPAQDMPWPAAYIRSIEGHNIIALREDITEDGQRLPKIVVHELLHCGLYQDRERRGQPQPPSLDPREELAVQAMTEVVLKRLNSTGRGVPLDQTHG
Ga0187776_112695631	3300017966	Tropical Peatland	AAVAAFGLPCTAPELRDVPVHEISWPAAYIRSMDGHNIIALREDVKGDSQRLLRIVVHELLHCGLYEDRERRGQPHPRSLDPYEEMAVQAMTDAVLRRLSEN
Ga0187773_100517252	3300018064	Tropical Peatland	MELSTLIAAVAAFGLPCTNPDLRRYPAEELPWPAVYVRTVDGQNIIAVRESVRSEPQRLAKILVHELLHCGLYEERERRGEPQLKSLDPREELAVQAMTEAVLQRLDGWSGRGGGSEYQ
Ga0184618_102847132	3300018071	Groundwater Sediment	MELTTLIAAVAAFGLPCSNPELLDYPAEALPWPAAYIRSIEGHNIIALRRGIRNETQRLPKILVHELLHCGLYEARERRGQLHPRSLDPREEMAVNAMTDVVLERMHETRRG
Ga0187894_102914041	3300019360	Microbial Mat On Rocks	MDLATLIAAVAAFGLPCGNPELRDYVAEDMPWPAAYIRSIEGHNIIALRVGVRSDTQRLSKILVHELLHCGLYEDRERRGQPHPRSLDPREEMAVNEMTDVVLERLNGSRR
Ga0193716_11182351	3300020061	Soil	MELTTLIAAVAVFGLPCSNPELRDYTAEELPWPAAYIRSDEGRNIIALRDGVRNDTEHLPGFLVHELLHCGLFEDRERRGQPQPHSLDLREEMMVKEMTDLLLRRLDESRHG
Ga0210377_102108093	3300021090	Groundwater Sediment	MDISTLLAAVAAFGLPCSDPQLRDFPRDQMPWPAAYVRSIEGRNIIALRDGTRDDLQRLPRIIVHELLHCGLYEDRELRGKPQPRSLDPREEMAVHAMTDAVLKRLNGNGRAEGA
Ga0210408_101458762	3300021178	Soil	MDITAVIAAVAAFGLPCSNPELRDYSTEELSWPAAYVRTIEGHNIIALRDDIRDDAQRLPRILVHELLHCGLYEDRERRGQPQPPSLDPREEMAVQAMTDVVLRRLNGI
Ga0210408_109644192	3300021178	Soil	MELATLVAAVAAFGLPCSNPELRDYPAEDLPWPAAYIRTIEGRNIIALRTDIGNETQRLPRIIVHELLHCGLYEERERRGQPHPRYLDPREEMAVNEMTDAVLVRLYEARRG
Ga0210384_116139721	3300021432	Soil	MEITTLLAAVAAFGLPCSNPELRDYPAQDMPWPAAYVRSIDGHNIIALREGLRDDAQRLSKVLVHELPHCGLYEDRERRGQPQPRSLDPREEMAVQAM
Ga0207710_105059061	3300025900	Switchgrass Rhizosphere	MEIATLLAAVAALGLPCSNPELRDFPAEQMRWPAAYVRTTEGHNIIALREGTRDETQRLPRILVHELLHCGMYEDRERRGQPHPLSLDLREEMAVQAMTDVVLNRLDGSRVGGAG
Ga0207703_106897442	3300026035	Switchgrass Rhizosphere	MEIATLLAAVAALGLPCSNPELRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDETQRLPTILVHELLHCGLYEDRERRGQPHPLSLDPREEMTVQAMTDVVLKRLDGSRVGGAA
Ga0209647_100483411	3300026319	Grasslands Soil	MELTTLIAAVAVFGLPCTNPELRDYTTEELPWPAAYIRSDEGRNIIALRDGVRNDTEHLPRILVHELVHCGLFEDRERRGQPHPRSLDLREEMVVKEITDLVLKRLNESRHG
Ga0209382_104734171	3300027909	Populus Rhizosphere	MDITTLLAAVAAFGLPCSNPELRDIPSHAMPWPAAYVRSIQGNNIIALRAGTRDDAQRLPRILLHELLHCGLYEDRERRGQPHPRSLDPREEMAVQAMTDAVLMRVSKTAYATGG
Ga0209069_110202881	3300027915	Watersheds	MEIGTLLAAVAALGLPCSNPKLRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDETQRLPRILVHELLHCGLYEDRERRGQRHPLSLDLREEMAVHAMTEEVLKQLNGRVRGGAA
Ga0209885_10411131	3300027950	Groundwater Sand	MDITTLLAAVAAFGLPCNNPELRDYPGQDMPWPAAYIRSIEGQNIIALRDGIREDGRLPKILVHELLHCGLYEERQRRGQPQPLSLDPREEMTVQAMTDVVLQRLNATAREGWSGGFTDTRTAVR
Ga0137415_101165042	3300028536	Vadose Zone Soil	MELATLIAAVAAFGLPCSNPELRDYAAEELRWPAAYIRSIEGHNIIALRRGIRNDTQRLPRLLVHELLHCGLYEARERRGQPQPRSLDPREEMAVIEMTDVVLGRLHETGHG
Ga0307469_100260761	3300031720	Hardwood Forest Soil	MELATLLAAVAAFGLPCSNPELRDYTAEDLPWPAAYIRTIEGRNIIALRTDIGNETQRLPRIIVHELLHCGLYEERERRGQPHPRYLDPREEMAVNEMTDAVLVRLYEARRR
Ga0307469_101254753	3300031720	Hardwood Forest Soil	MDISTLIAAVAAFGLPCSNPELRDYSTDELSWPAAYVRTIEGHNIIALRDDIRDDAQRLPRILVHELLHCGLYEERERRGQPQPPSLDPREEMAVQAMTDVVLKRLNGI
Ga0307469_101439911	3300031720	Hardwood Forest Soil	METMTLIAAVAAFGLPCSNPELRDYPSQDMPWPAAYVRTIEGHNIIALREGTRDDTQRLPRILVHELLHCGLYEDRQRRGQPQPASLDPREEMAVQAMTDVVLKRLN
Ga0307469_101955842	3300031720	Hardwood Forest Soil	MEITTLLAAVAAFGLPCTNPELQDFPTQDMPWPAAYVRSIEGHNIIALREGMRDDAQRLPELIVHELLHCGLYEDRERRGQPQPRSLDPHEEMAVRAMTDVVLRRLSERGRDGAA
Ga0307469_105405692	3300031720	Hardwood Forest Soil	MEIATLLAAVAALGLPCSNPELRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDETQRLSRILVHELLHCGLYEDRERRGQPHPLSLDPREEMAVQAMTDVVLKRLDGSRVGGAA
Ga0307469_106161122	3300031720	Hardwood Forest Soil	MDITTLLAAVAAFGLPCNNPELRDYPAQDMPWPAAYIRSVEGQNIIALRDGIREDGRLPKILVHELLHCGLYEDRERRGQPQPLSLDPREEMAVQAMTDVVLKRLNATARESGGWPAA
Ga0307469_114954081	3300031720	Hardwood Forest Soil	MEITTLLAAVAAFGLPCSNPELRDYSAQEMPWPAAYIRSIEGQNIIALREDVRDDPRLPKILVHELLHCGLYEERERRGQPQPRSLDPREEMAVQALTDVVLKRLS
Ga0307468_1003793043	3300031740	Hardwood Forest Soil	MELATLLAAVAAFGLPCSNPELRDYTAEDLPWPAAYIRTIEGRNIIALRTDIGNETQRLPRIIVHELLHCGLYEERERRGQPHPRYLDPREEMA
Ga0307468_1006820291	3300031740	Hardwood Forest Soil	MEIATLLAAVAALGLPCSNPELRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDEPQRLPRILVHELLHCGLYEDRERRGQPHPLSLDRREEMAVQAMTDVVLERLNVSRFEGTG
Ga0307468_1007912521	3300031740	Hardwood Forest Soil	MEITTLLAAVAAFGLPCSNPELRDYSAQEMPWPAAYIRSIEGQNIIALREDVRDDPRLPKILVHELLHCGLYEERERRGQPQPRSLDPREEMAVQAMTDVVLKRLSEAAPQGAEARVAAHMRY
Ga0307473_101078581	3300031820	Hardwood Forest Soil	GLSCSDPELREFPAEQMPWPAAYVRTVEGHNIIALREGTRDETQRLPRILVHELLHCGLYEDRERRGQPHPLSLDPREEMTVQAMTDVVLKRLDGSRVGGAA
Ga0307473_102550962	3300031820	Hardwood Forest Soil	METMTLIAAVAAFGLPCSNPELRDYPSQDMPWPAAYVRTIEGHNIIALREGTRDDTQRLPRILVHELLHCGLYEDRQRRGQPQPASLDPREEMAVQAMTDV
Ga0307473_103665352	3300031820	Hardwood Forest Soil	MEITTLLAAVAAFGLPCTNPELRDFPTQDMPWPAAYVRSIEGHNIIALREGMRDDAQRLSKVLVHELLHCGLYEDRARRGQPQPRSLDPREEMAVQAMTDVVLRRLSERGRDGAA
Ga0307473_113450831	3300031820	Hardwood Forest Soil	MDISTLIAAVAAFGLPCSNPELRDYSTEELSWPAAYVRTIEGHNIIALRDDIRDDAQRLPRILVHELLHCGLYEDRERRGQPQPPSLDPREEMAVQAMTDVVLRRLNAI
Ga0306921_113506211	3300031912	Soil	MDIATLLAAVAAFGLPCTNPELRDFPAGDMPWPAAYVRSIDGHNVIALREGVREDARLTKVLVHELLHCGLYEERERRGRPQPPSLDPREEMAVQAMTEVVLRRLPELVAGAQTRRTAVH
Ga0307470_107137561	3300032174	Hardwood Forest Soil	MEIATLLAAVAALGLPCSNPELRDVPAEQMPWPAAYVRTIEGHNIIALREGTRDEPQRLPRILVHELLHCGLYEDRERRGQPHPLSLDRREEMAVQAMTDVVLERLNVSRFEGTG
Ga0307471_1003868591	3300032180	Hardwood Forest Soil	VERRVRCLWTLELLMEITSLIAAVAAFGLPCSNPELHDSPAQQMPWPAAYVRSIEGHNIILLREGTRDDTQRLPKILVHELLHCGLYEDRERRGQAHPASLDPREEMAVQAMTDAVLRRLSERGRDGAALKSTVL
Ga0307471_1004239092	3300032180	Hardwood Forest Soil	AVAAFGLPCSNPELRDYAAKELPWPAAYIRSIEGHNIIALRRGIRNDMQRLPRLLVHELLHCGLYEARERRGQPQPRSLDPREEMAVIEMTDAVLGLLHEPGRG
Ga0307471_1004274881	3300032180	Hardwood Forest Soil	MDITTVIAAVAAFGLPCSNPELRDYSTEELSWPAAYVRTIEGHNIIALRDDIRDDAQRLPRILVHELLHCGLYEERERRGQPQPPSLDPREEMAVQAMTDVVLKRLNGI
Ga0307471_1007470581	3300032180	Hardwood Forest Soil	MEIGTLLAAVAAFGLPCSSPELRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDETQRLPRILVHELLHCGLYEDRERRGQPHPLSLDPREEMTVQAMTDVVLKRLDERRVGGAA
Ga0307471_1009429552	3300032180	Hardwood Forest Soil	MDIVALIAAVAAFGLPCTDPELRDFPVQQMPWPAAYVRSIEGHNIIALREGTRDDSQRMPRILVHELLHCGLYEDRERRGQPHPRSLDPREEMAVQQMTEVVLQRLDDYRLGVGRHVMRGEQ
Ga0307471_1011660422	3300032180	Hardwood Forest Soil	MEITTLLAAVAAFGLPCTNPELRDFPTQDMPWPAAYVRSIEGHNIIALREGMRDDAQRLSKVLVHELLHCGLYEDRERRGQPQPRSLDPREEMAVQAMTDVVLRRLSERGRDGAA
Ga0307471_1029500581	3300032180	Hardwood Forest Soil	GLPCSNPELRDFPAEQMPWPAAYVRTIEGHNIIALREGTRDETQRLSRILVHELLHCGLYEDRERRGQPHPLSLDRREEMAVQAMTDVVLERLNVSRFEGTG
Ga0307471_1030250131	3300032180	Hardwood Forest Soil	MDIATLIAAVAAFGLPCSNPELRDYPFAELPWPAAYVRTIEGQNIIVLREGVRNDTQRLPRILVHELLHCGLYEDRERRGQPHSRSLDPREEMAVQEMTDVVLKRLNGNEREE
Ga0307471_1032191261	3300032180	Hardwood Forest Soil	MEITTLIAAVAAFGLPCGNPEVRDFPAEKMPWPAAYIRSVEGQNIIALREGVRNDTKTLQKILVHELLHCGLYEDRERRGQQHPLSLDLREEMAVHAITELVLKQLNGSVREPLELRRPDPRTIALA
Ga0307472_1003287591	3300032205	Hardwood Forest Soil	MDISTLIAAVAAFGLPCSNPELRDYSTEELSWPAAYVRTIEGHNIIALRNDIRDDAQRLPRILVHELLHCGLYEDRERRGQPQPPSLDPREEMAVQAMTDVVLKRLHGI
Ga0307472_1024746391	3300032205	Hardwood Forest Soil	MEIATLLAAVATLGLPCSNPELRDVPGEQMPWPAAYVRTIEGHNIIALREGTRDETRRLPRILVHELLHCGLYEDRERRGQPHPLSLDPREEMAVQAMTDVVLNRLDGSRVGGAA
Ga0306920_1019876291	3300032261	Soil	MDLTTLIAAVAAFGLPCSNPELHDYTAGDLPWPAAYVRTIEGQNVILLRQGIKDDTRRLPQIIVHELLHCGLYEERERRGQAHPRSLDPREE
Ga0335085_100048351	3300032770	Soil	MELSTLMAAVAALGLPCTNPDLRDYPAEELPWPAAYIRTFEGQNIIAVRENVRSNPQRLAKILVHELLHCGLYEERERRGQPQLRSLDPREEVAVQAMTEAVLQRLDGWARRGGGGGYE
Ga0335085_102884381	3300032770	Soil	MEITTLLAAVAAFGLPCTNPELRDFPTQDMPWPAAYIRSIDGHNIIALREGMRDDVQRLPKVLVHELLHCGLYEDRERRGQPQPRSLDPREEMAVQAMTDVVLKQMNERGREGNG
Ga0335085_116145011	3300032770	Soil	MSVCRLQTRELGTRVAFDTGAGSVNRLRKVHMEMATLLAAVAAFGLPCTNPELRDFAAEDMPWPAAYVRSIDGHNIIALRAGVREDAQLPKILVHELLHCGLYEERERRGRPQPPSLDPREEMAVQAMTEVVLRRLPELVARAQTQSAAVHY
Ga0335082_1000721917	3300032782	Soil	MEITTLLAAVAAFGLPCTNPELRDFPAQDMPWPAAYVRSIEGHNIIALREGLRDDTQHLPRVLVHELLHCGLYEDRERRGQPQPRSLDPREEMAVQAMTDVVLRRLNESGHEGNG
Ga0335082_113604031	3300032782	Soil	RLRKVHMEMATLLAAVAAFGLPCTNPELRDFAAEDMPWPAAYIRSIDGHNIIALRAGVREDAQLPKILVHELLHCGLYEERERRGRPQPPSLDPREEMAVQAMTEVVLRRLPELVARAQTQSAAVHY
Ga0335079_100492711	3300032783	Soil	MEITTLLAAVAAFGLPCTNPELRDFPTQDMPWPAAYVRSIEGHNIIALREGLRDDTQHLPRVLVHELLHCGLYEDRERRGQPQPRSLDPREEMAVQAMTDVVLRRLNESGHEGNG
Ga0335080_100402833	3300032828	Soil	MEMATLLAAVAAFGLPCTNPELRDFAAEDMPWPAAYVRSIDGHNIIALRAGVREDAQLPKILVHELLHCGLYEERERRGRPQPPSLDPREEMAVQAMTEVVLRRLPELVARAQTQSAAVH
Ga0335083_107092412	3300032954	Soil	MEITTLLAAVAAFGLPCTNPELRDFPTQDMPWPAAYIRSIDGHNIIALREGMRDDVQRLPKVLVHELLHCGLYEDRERRGQPQPRSLDPREEMAVQAMTDVVLRRLNESGHEGNG
Ga0335076_106785581	3300032955	Soil	MEMATLLAAVAAFGLPCTNPELRDFAAEDMPWPAAYVRSIDGHNIIALRAGVREDAQLPKILVHELLHCGLYEERERRGRPQPPSLDPREEMAVQAMTEVVLRRLPEL
Ga0335084_101262332	3300033004	Soil	MDIVTLLAAVAAFGLPCSNPELRDFPAQQMPWPAAYVRSIEGHNIIALREGTRDDAQRLPRILVHELLHCGLYEDRERRGQAQLRSLDPREEMAVQAMTDAVLRRLSGNAHAQGA
Ga0335077_104427862	3300033158	Soil	MSVCRLQTRELGTRVAFDTGAGSANRLRKVHMEMATLLAAVAAFGLPCTNPELRDFAAEDMPWPAAYVRSIDGHNIIALRAGVREDAQLPKILVHELLHCGLYEERERRGRPQPPSLDPREEMAVQAMTEVVLRRLPELVARAQTQSAAVHY
Ga0335077_107156471	3300033158	Soil	MDIATSLAVVAAFGLSCSPELRDFPGEQMPWPAGYMRSIEGQNIIALREGTRDHEQRLSRILVHELLHCALYEDRERRRQPQPRSLDPREEMTGQAMTDLVLKRLNGNGRGEGG
Ga0335077_121575861	3300033158	Soil	MEITTLLAAVAAFGLPCTNPELRDFPTQDMPWPAAYIRSIEGHNIIALREGMRDDVQRLPKVLVHELLHCGLYEDRERRGQPQPRSLDPREEMAVQAMTDVVLKRMNERGREGNG
Ga0326726_113165472	3300033433	Peat Soil	MELTVLIAAVAAFGLPCSNPELRDYPAVDLPWPAAYVRTIEGQNIIMLREGIRTDTQRLPKILVHELLHCGLYEDRERRGQRHSRSLDPREEMAVQAMTDAVLKRLDGMVALPARLPLAR
Ga0314865_190130_36_383	3300033806	Peatland	MDITTLVAAVAAFGLPCSSPELRDFPAEQMLWPAAYVRSIEGQDIIALREGTRDDEQRLSRILVHELLHCGLYEDRERRGQPQLRSLDPREEMAVQAMTDVVLKRLNGNGCEEGG
Ga0364943_0100887_676_1005	3300034354	Sediment	MDVTTLLAVVAAFGLPCSSPELRDFPAEQMLWPAAYVRSIEGHNIIALREGTRDDEQRLSRILVHELLHCGLYEDRERRGQPQPRSLDPREEMAVQAMTDLVLKRLSGNG
Ga0364943_0191217_1_288	3300034354	Sediment	MEIGTLLAAVAAFGLPCSNPELRDLPAEQMPWPAAYVRTIEGHNIIALREGTRDETQRLPRILVHELLHCGLYEDRERRGQPHPLSLDPREEMAVQ
Ga0364941_023273_599_976	3300034417	Sediment	MDITTLLAAVAAFGLPCNNPELRDYPAQDMPWPAAYIRSIEGQNIIALRDGIREDGRLPKILVHELLHCGLYEDRERRGQPQPVSLDPREEMAVQAMTDVVLKRLNATARERAGWPAAALTLEQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060686

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences