Metagenome / Metatranscriptome Family F060676

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060676
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	114 residues
Representative Sequence	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS
Number of Associated Samples	106
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.54 %
% of genes near scaffold ends (potentially truncated)	55.30 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.485 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (18.939 % of family members)
Environment Ontology (ENVO)	Unclassified (32.576 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.758 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.03% β-sheet: 7.76% Coil/Unstructured: 61.21%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF09995	MPAB_Lcp_cat	50.76
PF00512	HisKA	9.09
PF02518	HATPase_c	9.09
PF02954	HTH_8	4.55
PF00375	SDF	4.55
PF08668	HDOD	3.03
PF00072	Response_reg	0.76
PF13620	CarboxypepD_reg	0.76
PF04347	FliO	0.76
PF00312	Ribosomal_S15	0.76
PF13704	Glyco_tranf_2_4	0.76
PF00005	ABC_tran	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0184	Ribosomal protein S15P/S13E	Translation, ribosomal structure and biogenesis [J]	0.76
COG3190	Flagellar biogenesis protein FliO	Cell motility [N]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.48 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.48 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.48 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	67.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.52 %
Unclassified	root	N/A	1.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.52 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.52 %
Unclassified	root	N/A	1.52 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.52 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.52 %
Unclassified	root	N/A	1.52 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.52 %
Unclassified	root	N/A	1.52 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.76 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.52 %
Unclassified	root	N/A	1.52 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.76 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.52 %
Unclassified	root	N/A	1.52 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.76 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104694471	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300003319\|soilL2_10171419	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300003321\|soilH1_10190138	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300003996\|Ga0055467_10225094	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300004114\|Ga0062593_100066427	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300004114\|Ga0062593_101108477	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300004156\|Ga0062589_100185845	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1480	Open in IMG/M
3300005288\|Ga0065714_10080994	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2404	Open in IMG/M
3300005290\|Ga0065712_10000777	All Organisms → cellular organisms → Bacteria → Proteobacteria	9892	Open in IMG/M
3300005294\|Ga0065705_10109493	All Organisms → cellular organisms → Bacteria	4734	Open in IMG/M
3300005330\|Ga0070690_100019333	All Organisms → cellular organisms → Bacteria	4132	Open in IMG/M
3300005336\|Ga0070680_100584179	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M
3300005338\|Ga0068868_101991361	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300005339\|Ga0070660_101564176	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300005340\|Ga0070689_102215543	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300005353\|Ga0070669_100197517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1581	Open in IMG/M
3300005364\|Ga0070673_100582809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300005365\|Ga0070688_100287919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300005438\|Ga0070701_10214347	All Organisms → cellular organisms → Bacteria → Acidobacteria	1145	Open in IMG/M
3300005440\|Ga0070705_100262963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300005444\|Ga0070694_100616283	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300005456\|Ga0070678_102133004	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300005457\|Ga0070662_101013465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300005459\|Ga0068867_100164747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1751	Open in IMG/M
3300005459\|Ga0068867_100561728	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300005518\|Ga0070699_101832461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005549\|Ga0070704_100787455	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300005564\|Ga0070664_100584355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300005577\|Ga0068857_101405404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300005719\|Ga0068861_102365610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300006049\|Ga0075417_10543018	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300006844\|Ga0075428_102591503	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300006845\|Ga0075421_100029712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6905	Open in IMG/M
3300006845\|Ga0075421_100064817	All Organisms → cellular organisms → Bacteria	4613	Open in IMG/M
3300006845\|Ga0075421_101253976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300006846\|Ga0075430_100065530	All Organisms → cellular organisms → Bacteria	3051	Open in IMG/M
3300006846\|Ga0075430_100267867	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300006846\|Ga0075430_100593154	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300006847\|Ga0075431_100784840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300006852\|Ga0075433_10130384	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300006865\|Ga0073934_10000133	All Organisms → cellular organisms → Bacteria	216452	Open in IMG/M
3300006880\|Ga0075429_100596481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300006880\|Ga0075429_100706380	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300007004\|Ga0079218_10013209	All Organisms → cellular organisms → Bacteria	4193	Open in IMG/M
3300007004\|Ga0079218_10029183	All Organisms → cellular organisms → Bacteria	3165	Open in IMG/M
3300009094\|Ga0111539_12252268	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300009094\|Ga0111539_13165857	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300009147\|Ga0114129_10195652	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300009156\|Ga0111538_11409890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300009162\|Ga0075423_10076287	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300009176\|Ga0105242_10365680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1336	Open in IMG/M
3300009177\|Ga0105248_11306347	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300009553\|Ga0105249_11621365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300009609\|Ga0105347_1024422	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300009678\|Ga0105252_10333009	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300010036\|Ga0126305_10009466	All Organisms → cellular organisms → Bacteria	4853	Open in IMG/M
3300010047\|Ga0126382_11005074	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300010373\|Ga0134128_11693167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300011423\|Ga0137436_1016619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1810	Open in IMG/M
3300011427\|Ga0137448_1058002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300011428\|Ga0137456_1032169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300011434\|Ga0137464_1003866	All Organisms → cellular organisms → Bacteria	3962	Open in IMG/M
3300011436\|Ga0137458_1184305	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300011440\|Ga0137433_1015911	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300012040\|Ga0137461_1036946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300012228\|Ga0137459_1075852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300012899\|Ga0157299_10352486	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300012911\|Ga0157301_10336514	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300012914\|Ga0157297_10039883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300014745\|Ga0157377_10148967	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300014745\|Ga0157377_10288469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300018063\|Ga0184637_10025051	All Organisms → cellular organisms → Bacteria	3595	Open in IMG/M
3300018077\|Ga0184633_10414831	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300018476\|Ga0190274_11163664	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300019361\|Ga0173482_10373338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300021081\|Ga0210379_10561207	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300021082\|Ga0210380_10236923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300022899\|Ga0247795_1028748	All Organisms → cellular organisms → Bacteria → Acidobacteria	907	Open in IMG/M
3300025310\|Ga0209172_10000143	All Organisms → cellular organisms → Bacteria → Acidobacteria	216542	Open in IMG/M
3300025907\|Ga0207645_10520921	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300025908\|Ga0207643_10200925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1214	Open in IMG/M
3300025917\|Ga0207660_10757279	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300025919\|Ga0207657_11072967	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300025923\|Ga0207681_10349707	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300025926\|Ga0207659_10107126	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300025926\|Ga0207659_10452879	All Organisms → cellular organisms → Bacteria → Acidobacteria	1081	Open in IMG/M
3300025933\|Ga0207706_10153164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2028	Open in IMG/M
3300025940\|Ga0207691_10046124	All Organisms → cellular organisms → Bacteria	4007	Open in IMG/M
3300025945\|Ga0207679_10311633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1360	Open in IMG/M
3300025945\|Ga0207679_10323194	All Organisms → cellular organisms → Bacteria → Acidobacteria	1337	Open in IMG/M
3300026089\|Ga0207648_11511640	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300026116\|Ga0207674_10110126	All Organisms → cellular organisms → Bacteria	2729	Open in IMG/M
3300026118\|Ga0207675_100288702	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300027384\|Ga0209854_1083978	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300027513\|Ga0208685_1052359	All Organisms → cellular organisms → Bacteria → Acidobacteria	882	Open in IMG/M
3300027873\|Ga0209814_10475602	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300027886\|Ga0209486_10009724	All Organisms → cellular organisms → Bacteria	4287	Open in IMG/M
3300027909\|Ga0209382_10005112	All Organisms → cellular organisms → Bacteria	17148	Open in IMG/M
3300027909\|Ga0209382_10037325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	5834	Open in IMG/M
3300027909\|Ga0209382_10619961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300028380\|Ga0268265_10996004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300028812\|Ga0247825_10910751	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1118928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300031538\|Ga0310888_10005730	All Organisms → cellular organisms → Bacteria	4387	Open in IMG/M
3300031538\|Ga0310888_10134189	All Organisms → cellular organisms → Bacteria → Acidobacteria	1302	Open in IMG/M
3300031538\|Ga0310888_10911438	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300031847\|Ga0310907_10674683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300031854\|Ga0310904_10118801	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300031854\|Ga0310904_10157498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300031908\|Ga0310900_11193730	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300031908\|Ga0310900_11223899	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300031913\|Ga0310891_10131691	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300031940\|Ga0310901_10594648	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300031944\|Ga0310884_10122425	All Organisms → cellular organisms → Bacteria → Acidobacteria	1306	Open in IMG/M
3300031944\|Ga0310884_10582114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300031944\|Ga0310884_10949227	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300032000\|Ga0310903_10529006	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300032013\|Ga0310906_10523818	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300032013\|Ga0310906_10739309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300032013\|Ga0310906_10783073	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300032017\|Ga0310899_10014140	All Organisms → cellular organisms → Bacteria	2449	Open in IMG/M
3300032017\|Ga0310899_10705918	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300032075\|Ga0310890_10172740	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300032122\|Ga0310895_10059992	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300032122\|Ga0310895_10575925	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300032144\|Ga0315910_10058920	All Organisms → cellular organisms → Bacteria	2794	Open in IMG/M
3300032144\|Ga0315910_11334956	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300032157\|Ga0315912_10247707	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300032179\|Ga0310889_10306789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300034671\|Ga0314796_086898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.33%
Host-Associated	Host-Associated	41.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	44.70%
Plants	Host-Associated → Plants	41.67%
Aquatic	Environmental → Aquatic	13.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.82%
Sediment	Environmental → Aquatic → Sediment	9.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.85%
Freshwater	Environmental → Aquatic → Freshwater	1.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.52%
Marine	Environmental → Aquatic → Marine	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.85%
Loam	Environmental → Terrestrial → Soil → Loam	7.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.58%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.52%
Sand	Environmental → Terrestrial → Soil → Sand	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.52%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	18.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	18.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.27%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.52%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.52%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.76%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1046944712	3300000364	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDSKSRGSGPATGGNRGTGS
soilL2_101714193	3300003319	Sugarcane Root And Bulk Soil	LYTHPMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPTRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPEAKSKGSGPATGDNRGTGS*
soilH1_101901382	3300003321	Sugarcane Root And Bulk Soil	LYTHPMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRERPRPAEVANREAVETYREMLSPTRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPEAKSRGSGPATGDNRGTGS*
Ga0055467_102250942	3300003996	Natural And Restored Wetlands	MQLRNARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPSSWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS*
Ga0062593_1000664272	3300004114	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS*
Ga0062593_1011084772	3300004114	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPEKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDNRGAGS*
Ga0062589_1001858451	3300004156	Soil	PLGSHRISALPHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS*
Ga0065714_100809943	3300005288	Miscanthus Rhizosphere	PTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS*
Ga0065712_100007773	3300005290	Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS*
Ga0065705_101094933	3300005294	Switchgrass Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSKGSGPAAGGNRGTGS*
Ga0070690_1000193331	3300005330	Switchgrass Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLALFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS*
Ga0070680_1005841792	3300005336	Corn Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSSQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRTDTKSRGSGPAAGGNRGTGS*
Ga0068868_1019913611	3300005338	Miscanthus Rhizosphere	RPVSECAGFSLRGEPSTLIDMQLRIARVCLDCEEVHDAQQCPTCASETFAFLSRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGA*
Ga0070660_1015641761	3300005339	Corn Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNT
Ga0070689_1022155431	3300005340	Switchgrass Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDSRGTGS*
Ga0070669_1001975172	3300005353	Switchgrass Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS*
Ga0070673_1005828091	3300005364	Switchgrass Rhizosphere	QCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS*
Ga0070688_1002879192	3300005365	Switchgrass Rhizosphere	TARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS*
Ga0070701_102143471	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRP
Ga0070705_1002629631	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DSGRGRSGYQHALCRSAQAVACALKPSTLICMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS*
Ga0070694_1006162832	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSSQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS*
Ga0070678_1021330041	3300005456	Miscanthus Rhizosphere	EAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLSRRGALGLALFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS*
Ga0070662_1010134652	3300005457	Corn Rhizosphere	CLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRTDTKSRGSGPAAGGNRGTGS*
Ga0068867_1001647473	3300005459	Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSSQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRG
Ga0068867_1005617282	3300005459	Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPAS
Ga0070699_1018324611	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VGSFGYTGSMQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRQRPRPTDLANREAVETYREMLTPQPPSSGWSLIRRGAVGLAIFGVAGWMWRRNTRAESESRGSGPATGGNRGTGS*
Ga0070704_1007874552	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPET
Ga0070664_1005843551	3300005564	Corn Rhizosphere	DAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPEKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDNRGAGS*
Ga0068857_1014054042	3300005577	Corn Rhizosphere	QQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAISGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS*
Ga0068861_1023656102	3300005719	Switchgrass Rhizosphere	CASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS*
Ga0075417_105430181	3300006049	Populus Rhizosphere	ARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANRETVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS*
Ga0075428_1025915031	3300006844	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVATREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTR
Ga0075421_1000297127	3300006845	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRQRPRPTEPANREAVETYREMLSPQRPTGWSLVRRGALGLAIFGVAGWMWRRNNRPDTSSRGSGPATGGNRGTGS*
Ga0075421_1000648173	3300006845	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRARPRPAEPANPETVATYREMLSPQHGSGWSLIRRGALGLAIFGVAGWMWRRNTRPDSSSRGSGPAQGGTRSTGS*
Ga0075421_1012539762	3300006845	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS*
Ga0075430_1000655305	3300006846	Populus Rhizosphere	TARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRARPRPAEPANPETVATYREMLSPQHGSGWSLIRRGALGLAIFGVAGWMWRRNTRPDSSSRGSGPAQGGTRSTGS*
Ga0075430_1002678672	3300006846	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRQRPRPTEPANREAVETYREMLSPQRPTGWSLVRRGALGLAIFGVAGWMWRRNARTETTSRGSGPAAGGNRGTGS*
Ga0075430_1005931541	3300006846	Populus Rhizosphere	MKGSISGRPFGVAQDISIAHELRPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPSGWSLIRR
Ga0075431_1007848402	3300006847	Populus Rhizosphere	QLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRARPRPAEPANPETVATYREMLSPQHGSGWSLIRRGALGLAIFGVAGWMWRRNTRPDSSSRGSGPAQGGTRSTGS*
Ga0075433_101303843	3300006852	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVATREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS*
Ga0073934_10000133113	3300006865	Hot Spring Sediment	MQLRTARVCLDCEEVHDAQQCPTCASESFAFLTRWVPVPERRSRPRPPEAANPEVVETYRELLSPKPHSGWRLLRRGALGLALFGVAGWVWRRNTRREATSRDKDPAAGGNRGTGS*
Ga0075429_1005964812	3300006880	Populus Rhizosphere	CLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRQRPRPTEPANREAVETYREMLSPQRPTGWSLVRRGALGLAIFGVAGWMWRRNNRPDTSSRGSGPATGGNRGTGS*
Ga0075429_1007063801	3300006880	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPGRRQRPRPTEPANREAVETYREMLSPQRPTGWSLVRRGALGLAIFGVAGWMWRRNARTETTSRGSGPAAGGNRGT
Ga0079218_100132094	3300007004	Agricultural Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAELANREAVETYREMLSPQRPTGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGDNRGTGS*
Ga0079218_100291831	3300007004	Agricultural Soil	PTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPERPSGWSLIRKGALGLAIFGVAGWMWQRNTRPEASSKDKGPSTGGNRGTGS*
Ga0111539_122522682	3300009094	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPETKTRGSGPATGGDRGTGS*
Ga0111539_131658572	3300009094	Populus Rhizosphere	EEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEPANREAVETYREMLSPQHPTGWSLIRRGALGLAIFGVAGWMWRRNARPETSSRGSGPTQGGNRSAGS*
Ga0114129_101956522	3300009147	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVATREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPAAGDDRGTGS*
Ga0111538_114098901	3300009156	Populus Rhizosphere	RTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDSRGTGS*
Ga0075423_100762873	3300009162	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRDALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS*
Ga0075423_119838592	3300009162	Populus Rhizosphere	MQLRTARLCLDCEEVHDAQQCPVCASETFAYLTRWVPVPERRQRPRPAEPAGSETATAYREIMHPPPTTPWRAIRRGAVGLALFGVAGWLWKRTASSESTTPNTKAGGARGGTP*
Ga0105242_103656802	3300009176	Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSKGSGSASGDDRGTGS*
Ga0105248_113063471	3300009177	Switchgrass Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSG
Ga0105249_116213652	3300009553	Switchgrass Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPAAGGNRGTGS*
Ga0105347_10244223	3300009609	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRG
Ga0105252_103330092	3300009678	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSSNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS*
Ga0126305_100094665	3300010036	Serpentine Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYQEMLSPKRPSGWSLIRRGAMGLAIFGVAGWMWQRNTRPETKSRGSGPAAGDNRGTGS*
Ga0126382_110050742	3300010047	Tropical Forest Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRQRPRPTEVANREAVETYREMLSPQRSSGWSVIRRGALGLALFGVAGWMWRRNTRSETTSRGSGPATGGNRGTGS*
Ga0134128_116931671	3300010373	Terrestrial Soil	STLICMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS*
Ga0137436_10166192	3300011423	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS*
Ga0137448_10580021	3300011427	Soil	MQRRTARLCLDCEEVHDAQQCPSCASESFAYITRWVPVPERRQRPRPADVPNAETVDTYRAMLGPEPAGPWRLIRRGALGLAIVGVAGLLWRRNAPPGESSGRGPATGSDRAGTRSS*
Ga0137456_10321691	3300011428	Soil	WYTDPMQLRTARVCLDCEEVHDAQQCPTCASESFAYLTRWVPVPERRLRPRPAEAANRETVDTYREMLAPQRQGGWSMIRRGALGLAIFGVAGWMWRRNARPDANTRDAGPATGGNRGTGS*
Ga0137464_10038667	3300011434	Soil	LDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS*
Ga0137458_11843051	3300011436	Soil	MQLRTARVCLDCEEVHDAQQCPTCASESFAYLTRWVPVPERRLRPRPAEAANRETVDTYREMLAPQRQTGWSMIRRGALGLAIFGVAGWMWRRNARPDASTKGAGPATGGNRGTGS*
Ga0137433_10159113	3300011440	Soil	GTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS*
Ga0137461_10369462	3300012040	Soil	MQLRTARLCLDCEEVHDAQQCPSCASESFAYITRWVPVPERRQRPRPADVPNAETVDTYRAMLGPEPAGPWRLIRRGALGLAIVGVAGLLWRRNAPPGESSGRGPATGSDRAGTRSS*
Ga0137459_10758522	3300012228	Soil	SALPHELRPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS*
Ga0150984_1126539621	3300012469	Avena Fatua Rhizosphere	MQLRNARLCLDCEEVHDAQQCPACASETFAFITRWVPAPERRSRPRPAEAPDEEAVDTYRQMLSPDKDRWRMARQGALGLALFGVAGWMLRRNSQTTSPETTTGNQTSRMGG*
Ga0157299_103524861	3300012899	Soil	DAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS*
Ga0157301_103365142	3300012911	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPD
Ga0157297_100398831	3300012914	Soil	HRISALPHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCTSETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS*
Ga0157377_101489672	3300014745	Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAKQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS*
Ga0157377_102884692	3300014745	Miscanthus Rhizosphere	ASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSKGSGPATGDNRGTGS*
Ga0184637_100250512	3300018063	Groundwater Sediment	MQLRTARLCLDCEDVHDAQQCPTCASESFAYITRWVPVPERRQRPRITEGPNRESVNTYREMLSPEPTSVWRLIRRGALGLAIVGVAGLMWRRNAPPEAETSGNGPATGGDRTGTAS
Ga0184633_104148312	3300018077	Groundwater Sediment	MQLRTARLCLDCEDVHDAQQCPTCASESFAYITRWVPVPERRQRPRTTEGPNRESVNTYREMLSPEPTSVWRLIRRGALGLAIVGVAGLMWRRNAPPEAETSGNGPATGGDRTGTAS
Ga0190274_111636642	3300018476	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPETKSKGSGPATGDNRGTGS
Ga0173482_103733381	3300019361	Soil	ICMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPEKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDNRGAGS
Ga0210379_105612071	3300021081	Groundwater Sediment	DRMQLRTARLCLDCEEVHDAQQCPSCASESFAYITRWVPSPERRQRPRPVEVPNPETVDTYRAMLRPEPANGWQLIRRGALGLAIVGVAGWMWRRNARPEAETSGSGPATGGDRAGTGS
Ga0210380_102369232	3300021082	Groundwater Sediment	QQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS
Ga0247795_10287482	3300022899	Soil	LPHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS
Ga0209172_10000143115	3300025310	Hot Spring Sediment	MQLRTARVCLDCEEVHDAQQCPTCASESFAFLTRWVPVPERRSRPRPPEAANPEVVETYRELLSPKPHSGWRLLRRGALGLALFGVAGWVWRRNTRREATSRDKDPAAGGNRGTGS
Ga0207645_105209212	3300025907	Miscanthus Rhizosphere	LPDDLSPHAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGPQ
Ga0207643_102009252	3300025908	Miscanthus Rhizosphere	LPHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS
Ga0207660_107572791	3300025917	Corn Rhizosphere	LPDDLSPQAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSSQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRTDT
Ga0207657_110729672	3300025919	Corn Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKS
Ga0207681_103497072	3300025923	Switchgrass Rhizosphere	LPHELRPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS
Ga0207659_101071262	3300025926	Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS
Ga0207659_104528792	3300025926	Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRG
Ga0207706_101531642	3300025933	Corn Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLALFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS
Ga0207691_100461244	3300025940	Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS
Ga0207679_103116332	3300025945	Corn Rhizosphere	LPHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPEKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDNRGAGS
Ga0207679_103231942	3300025945	Corn Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSG
Ga0207648_115116402	3300026089	Miscanthus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSSQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTG
Ga0207674_101101263	3300026116	Corn Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPEKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDNRGAGS
Ga0207675_1002887022	3300026118	Switchgrass Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSSQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRTDTKSRGSGPAAGGNRGTGS
Ga0209854_10839781	3300027384	Groundwater Sand	MDCEEVHDAQQCPRCASETFAYMTRWVPSPERRQRPRTAAVSDGETPDRETVNTYRAMLSPEQTGAWSMIRRGAVGLAIFGVAGWLWRRTSRPDAETSGSGPATGGTRAGSGS
Ga0208685_10523592	3300027513	Soil	LPHELRPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRG
Ga0209814_104756022	3300027873	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVATREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPAAGDD
Ga0209486_100097242	3300027886	Agricultural Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAELANREAVETYREMLSPQRPTGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGDNRGTGS
Ga0209382_100051126	3300027909	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRARPRPAEPANPETVATYREMLSPQHGSGWSLIRRGALGLAIFGVAGWMWRRNTRPDSSSRGSGPAQGGTRSTGS
Ga0209382_100373254	3300027909	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRQRPRPTEPANREAVETYREMLSPQRPTGWSLVRRGALGLAIFGVAGWMWRRNNRPDTSSRGSGPATGGNRGTGS
Ga0209382_106199612	3300027909	Populus Rhizosphere	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPSGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS
Ga0268265_109960042	3300028380	Switchgrass Rhizosphere	CASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS
Ga0247825_109107512	3300028812	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPA
(restricted) Ga0255312_11189282	3300031248	Sandy Soil	EVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSKGSGPAAGGNRGTGS
Ga0310888_100057302	3300031538	Soil	LPHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS
Ga0310888_101341892	3300031538	Soil	LLHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLALFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS
Ga0310888_109114381	3300031538	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSKGSGP
Ga0310907_106746832	3300031847	Soil	DAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS
Ga0310904_101188013	3300031854	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSKGSGPATGDNRGTGS
Ga0310904_101574982	3300031854	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDSRGTGS
Ga0310900_111937302	3300031908	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRARPRPTELANRETVDTYREMLDPLRPSGWSVIRRGALGLALFGVAGWMWRRNARTGDGDRGSGIRDQKLGNGKKP
Ga0310900_112238991	3300031908	Soil	ISALLHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLALFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS
Ga0310891_101316912	3300031913	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS
Ga0310901_105946481	3300031940	Soil	TCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS
Ga0310884_101224251	3300031944	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRARPRPTELANRETADTYREMLDPQRPSGWSVIRRGALGLALFGVAGWMWRRNARTGDGDRGSGIRDQKLGN
Ga0310884_105821141	3300031944	Soil	TARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSKGSGPAAGGNRGTGS
Ga0310884_109492271	3300031944	Soil	LRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDSRGTGS
Ga0310903_105290062	3300032000	Soil	ARRVDSGRGRSGYQHALCRSAQAVACALKPSTLICMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRTRPRPAEVASREAVETYREMLSPKKTSGWSLVGRGALGLAIFGVAGWMWQRNTRPETKSKGSGPASGDDRGTGS
Ga0310906_105238181	3300032013	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRARPRPTELANRETADTYREMLDPQRPSGWSVIRRGALGLALFGVAGWMWRRNARTGDGDRGSGIRDQKLGNGK
Ga0310906_107393091	3300032013	Soil	SMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS
Ga0310906_107830731	3300032013	Soil	LLHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPNRPGGWSLIRRGALGLALFGVAGWMWQR
Ga0310899_100141403	3300032017	Soil	EVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS
Ga0310899_107059181	3300032017	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRARPRPTELANRETADTYREMLDPQRPSGWSVIRRGALGLALFGVAGWMWRRNARTGDGDRGSGIGDQ
Ga0310890_101727403	3300032075	Soil	LPHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRP
Ga0310895_100599922	3300032122	Soil	LLHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRTAEVANREAVETYREMLSPNRPGGWSLIRRGALGLALFGVAGWMWQRNTRPDTKSRGSGPATGGNRGTGS
Ga0310895_105759252	3300032122	Soil	AQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS
Ga0315910_100589203	3300032144	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRTRPRPTEVANREAVDTYREMLSPTKPTGWSLVRRGALGLALFGVAGWMWQRNTRPETTSRGSGPAAGDNRGTGS
Ga0315910_113349561	3300032144	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRARPRPTEVANREAVDTYREMLSPQKPTGWSLVRRGALGLALFGVAGWMWQRNTRPDTT
Ga0315912_102477072	3300032157	Soil	MQLRTARVCLDCEEVHDAQQCPTCASETFAYLTRWVPVPERRARPRPTEVANREAVDTYREMLSPQKPTGWSLVRRGALGLALFGVAGWMWQRNTRPDTTSRGSGPAAGDNRGTGS
Ga0310889_103067891	3300032179	Soil	SALPHELSPEAFGTLISMQLRTARVCLDCEEVHDAQQCPTCASETFAFLTRWVPVPERRQRPRPAEVANREAVETYREMLSPQRPGGWSLIRRGALGLAIFGVAGWMWQRNTRPDTKSRGSGPAAGGNRGTGS
Ga0314796_086898_365_655	3300034671	Soil	CPTCASETFAFLTRWVPVPERRQRPRPAEVASREAVETYREMLSPQKTSGWSLVRRGALGLAIFGVAGWMWQRNTRPETKSRGSGPASGDDRGTGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters