Metagenome / Metatranscriptome Family F060665

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060665
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	41 residues
Representative Sequence	MYDLLQKRDLAMKKYQTVLAGNANTGPADQARRYIKEAYRE
Number of Associated Samples	111
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.77 %
% of genes near scaffold ends (potentially truncated)	96.97 %
% of genes from short scaffolds (< 2000 bps)	92.42 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (32.576 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.72% β-sheet: 0.00% Coil/Unstructured: 49.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13248	zf-ribbon_3	51.52
PF00561	Abhydrolase_1	8.33
PF02604	PhdYeFM_antitox	6.06
PF12910	PHD_like	2.27
PF12697	Abhydrolase_6	2.27
PF01850	PIN	2.27
PF00275	EPSP_synthase	1.52
PF04024	PspC	1.52
PF00903	Glyoxalase	0.76
PF12681	Glyoxalase_2	0.76
PF00691	OmpA	0.76
PF08544	GHMP_kinases_C	0.76
PF00196	GerE	0.76
PF16640	Big_3_5	0.76
PF13470	PIN_3	0.76
PF08323	Glyco_transf_5	0.76
PF00072	Response_reg	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	6.06
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	6.06
COG0297	Glycogen synthase	Carbohydrate transport and metabolism [G]	0.76
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	83.33 %
Unclassified	root	N/A	8.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	28.03 %
Unclassified	root	N/A	8.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.82 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	28.03 %
Unclassified	root	N/A	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.82 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27.27 %
Unclassified	root	N/A	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.82 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	13.64 %
Unclassified	root	N/A	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.82 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.76 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.76 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.33 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.82 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.76 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.76 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10263169	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	550	Open in IMG/M
3300001174\|JGI12679J13547_1011620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	555	Open in IMG/M
3300002245\|JGIcombinedJ26739_101748323	Not Available	522	Open in IMG/M
3300004091\|Ga0062387_100034691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2270	Open in IMG/M
3300004091\|Ga0062387_100055740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1921	Open in IMG/M
3300005338\|Ga0068868_102207945	Not Available	524	Open in IMG/M
3300005436\|Ga0070713_100717466	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005436\|Ga0070713_101564611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	640	Open in IMG/M
3300005445\|Ga0070708_100603184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1035	Open in IMG/M
3300005530\|Ga0070679_101216418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	699	Open in IMG/M
3300005533\|Ga0070734_10333371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	867	Open in IMG/M
3300005537\|Ga0070730_10776387	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005559\|Ga0066700_10659253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	723	Open in IMG/M
3300005560\|Ga0066670_10183996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1246	Open in IMG/M
3300005598\|Ga0066706_10618955	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005712\|Ga0070764_10380868	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005764\|Ga0066903_103080566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	902	Open in IMG/M
3300005921\|Ga0070766_11243808	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300006050\|Ga0075028_100375087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	808	Open in IMG/M
3300006102\|Ga0075015_100843345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	553	Open in IMG/M
3300006854\|Ga0075425_102131423	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300009521\|Ga0116222_1251954	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300009623\|Ga0116133_1017892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1753	Open in IMG/M
3300009624\|Ga0116105_1192205	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300009698\|Ga0116216_10280408	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300009698\|Ga0116216_10525726	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300009700\|Ga0116217_10468229	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300009760\|Ga0116131_1064077	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300010359\|Ga0126376_12975907	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300010366\|Ga0126379_11756027	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300010366\|Ga0126379_12243703	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300010366\|Ga0126379_13578865	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300011120\|Ga0150983_14571790	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300011271\|Ga0137393_11074681	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300012189\|Ga0137388_11987657	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300012207\|Ga0137381_10532863	All Organisms → cellular organisms → Bacteria → Acidobacteria	1024	Open in IMG/M
3300012951\|Ga0164300_10172144	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300012957\|Ga0164303_10128349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1306	Open in IMG/M
3300012984\|Ga0164309_11969336	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300013100\|Ga0157373_10571131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	821	Open in IMG/M
3300013307\|Ga0157372_10233850	All Organisms → cellular organisms → Bacteria → Acidobacteria	2131	Open in IMG/M
3300014501\|Ga0182024_10882570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1080	Open in IMG/M
3300015241\|Ga0137418_10511018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300016705\|Ga0181507_1034726	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300017822\|Ga0187802_10314627	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300017940\|Ga0187853_10547672	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300017961\|Ga0187778_11284283	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300017970\|Ga0187783_10312976	All Organisms → cellular organisms → Bacteria → Acidobacteria	1145	Open in IMG/M
3300017972\|Ga0187781_11143966	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300017975\|Ga0187782_10656713	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300017975\|Ga0187782_10854923	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300017995\|Ga0187816_10357586	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300018002\|Ga0187868_1086782	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1237	Open in IMG/M
3300018017\|Ga0187872_10265827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	762	Open in IMG/M
3300018033\|Ga0187867_10000961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25232	Open in IMG/M
3300018038\|Ga0187855_10812424	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300018060\|Ga0187765_10677109	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300018085\|Ga0187772_10453626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	899	Open in IMG/M
3300018086\|Ga0187769_10413016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1015	Open in IMG/M
3300018088\|Ga0187771_11293537	Not Available	619	Open in IMG/M
3300018090\|Ga0187770_10144996	All Organisms → cellular organisms → Bacteria → Acidobacteria	1806	Open in IMG/M
3300020579\|Ga0210407_10865003	Not Available	695	Open in IMG/M
3300021170\|Ga0210400_10052852	All Organisms → cellular organisms → Bacteria → Acidobacteria	3165	Open in IMG/M
3300021180\|Ga0210396_10220132	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300021180\|Ga0210396_11269602	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300021181\|Ga0210388_10161926	All Organisms → cellular organisms → Bacteria → Acidobacteria	1948	Open in IMG/M
3300021181\|Ga0210388_10331556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1338	Open in IMG/M
3300021181\|Ga0210388_11077411	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300021402\|Ga0210385_10028178	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3619	Open in IMG/M
3300021402\|Ga0210385_11559488	Not Available	504	Open in IMG/M
3300021407\|Ga0210383_10858527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	775	Open in IMG/M
3300021407\|Ga0210383_10958028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300021407\|Ga0210383_11727426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300021474\|Ga0210390_10155505	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300021477\|Ga0210398_11231488	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300021477\|Ga0210398_11377571	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300021478\|Ga0210402_10806516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300021479\|Ga0210410_11116867	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300021560\|Ga0126371_11994836	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300022531\|Ga0242660_1156653	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300022557\|Ga0212123_10328945	Not Available	1055	Open in IMG/M
3300023056\|Ga0233357_1053675	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300025898\|Ga0207692_10637953	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300025939\|Ga0207665_10733279	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300025945\|Ga0207679_11463672	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300026467\|Ga0257154_1042064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300026548\|Ga0209161_10455744	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300027168\|Ga0208239_1020798	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300027432\|Ga0209421_1083951	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300027516\|Ga0207761_1037370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	952	Open in IMG/M
3300027698\|Ga0209446_1168559	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300027737\|Ga0209038_10274285	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300027825\|Ga0209039_10336572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	589	Open in IMG/M
3300027867\|Ga0209167_10829532	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300027874\|Ga0209465_10642275	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300027884\|Ga0209275_10556876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300027895\|Ga0209624_10000999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23637	Open in IMG/M
3300027895\|Ga0209624_10948463	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300027895\|Ga0209624_11000197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300028016\|Ga0265354_1008001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1029	Open in IMG/M
3300028017\|Ga0265356_1007460	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M
3300028798\|Ga0302222_10053104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1642	Open in IMG/M
3300028806\|Ga0302221_10131295	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1105	Open in IMG/M
3300028808\|Ga0302228_10185548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	950	Open in IMG/M
3300030043\|Ga0302306_10248742	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300030507\|Ga0302192_10456189	Not Available	519	Open in IMG/M
3300030707\|Ga0310038_10287598	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300031022\|Ga0138301_1842468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300031231\|Ga0170824_116269621	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300031715\|Ga0307476_10232990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1342	Open in IMG/M
3300031715\|Ga0307476_10430567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300031715\|Ga0307476_11093556	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300031718\|Ga0307474_10095239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2224	Open in IMG/M
3300031720\|Ga0307469_10396755	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1176	Open in IMG/M
3300031720\|Ga0307469_11570624	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300031753\|Ga0307477_10882500	Not Available	591	Open in IMG/M
3300031823\|Ga0307478_10601888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	919	Open in IMG/M
3300031962\|Ga0307479_10214254	All Organisms → cellular organisms → Bacteria → Acidobacteria	1898	Open in IMG/M
3300031962\|Ga0307479_11868776	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300032063\|Ga0318504_10622285	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300032261\|Ga0306920_101223708	All Organisms → cellular organisms → Bacteria → Acidobacteria	1084	Open in IMG/M
3300032515\|Ga0348332_12010560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	655	Open in IMG/M
3300032515\|Ga0348332_12701543	Not Available	501	Open in IMG/M
3300032770\|Ga0335085_10294987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1924	Open in IMG/M
3300032828\|Ga0335080_11094898	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300032892\|Ga0335081_11903114	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300032897\|Ga0335071_10012603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8649	Open in IMG/M
3300033289\|Ga0310914_10814303	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300033545\|Ga0316214_1050629	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300034091\|Ga0326724_0485814	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.94%
Host-Associated	Host-Associated	6.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.55%
Aquatic	Environmental → Aquatic	14.39%
Plants	Host-Associated → Plants	6.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.48%
Freshwater	Environmental → Aquatic → Freshwater	12.12%
Peat	Environmental → Terrestrial → Peat	4.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Sediment	Environmental → Aquatic → Sediment	1.52%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.21%
Loam	Environmental → Terrestrial → Soil → Loam	15.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.58%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.03%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.27%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.52%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.52%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.76%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102631692	3300000567	Peatlands Soil	EMYDLLQKRDLAMKKYETVLAGNANTGSADQARRYIKEAYRE*
JGI12679J13547_10116202	3300001174	Forest Soil	DLLQKRDLAMKKYQTVLAGNANTGPADEARRYIKEAYRE*
JGIcombinedJ26739_1017483232	3300002245	Forest Soil	EMYDLLQKRDLAMKKYEIVLAENGSTAPAEQARKHIREAYRE*
Ga0062387_1000346911	3300004091	Bog Forest Soil	YDLLQKRDLAMKKYQTVVAENGSTPRAEKAREHIREAYRE*
Ga0062387_1000557401	3300004091	Bog Forest Soil	YDLLQKRDLAMKKYETVLAQNGSTPPAERARKHIRDAYRE*
Ga0068868_1022079452	3300005338	Miscanthus Rhizosphere	AAGQMYDLMDKRELAMKSYQIVLTGNANTGPADLARRYIKEAYRE*
Ga0070713_1007174661	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MYDLLQKRDQAMKSYQAVLAGRTDSGQADLARRYIREAYRE*
Ga0070713_1015646111	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LAAGEMYDLLQKRDLAMKKYQTVLAGNGNTGPADQARHYIKEAYRE*
Ga0070708_1006031841	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MYDLLQKRDRAMKKYEMVLAMNSNTPPAEQARKHLKEAYRE*
Ga0070679_1012164181	3300005530	Corn Rhizosphere	NLAAGEMYDLMQKRDLAMKRYETVLAGNANTGPADQARRYIREAYRE*
Ga0070734_103333711	3300005533	Surface Soil	AAGEMYDLMQKRDLAMKRYETVLAGNANTGPADQARRYIREAYRE*
Ga0070730_107763871	3300005537	Surface Soil	MYDLLQKRDLAMKKYETVLAGNANTGPADQARRYIKEAYRE*
Ga0066700_106592531	3300005559	Soil	DLLQKRELAMKKYQTVLAENSGTPLAEEARKHIKEAYRE*
Ga0066670_101839961	3300005560	Soil	GEMYDLLQKRDLAMRKYEIVLAQNSSTPPAEQARKHIREAYRE*
Ga0066706_106189553	3300005598	Soil	MYDLLQKRDLAMKAYEAVLTGRADSGQADQARRHMKEAYRE*
Ga0070764_103808683	3300005712	Soil	GEMYDLLQKRDLAMKKYETVLAGNANTPPADQARRYIKEAYRE*
Ga0066903_1030805662	3300005764	Tropical Forest Soil	QMYDLMQKRDLAMRAYAAVLTGRPDSGQADMARRYLKDAYRE*
Ga0070766_112438082	3300005921	Soil	RDLAMKKYETVLAENGATPPAEKAREHLREAYRE*
Ga0075028_1003750871	3300006050	Watersheds	YDLLQKRDLAMKKYETVLAGNANTGPADAARRYIKEAYRE*
Ga0075015_1008433451	3300006102	Watersheds	AAGEMYDLLQKRDLAMKRYQTVLAGNANTGPADQARRYIREAYRE*
Ga0075425_1021314232	3300006854	Populus Rhizosphere	KRDLAMKSYETVLEGRADSGQADLARRYIKEAYRE*
Ga0116222_12519541	3300009521	Peatlands Soil	MYDLLQKRDLAMKKYQTVLAGNANTGPADQARRYIKEAYRE*
Ga0116133_10178921	3300009623	Peatland	MYDLMQKRDLALQKYQTVLAGNANTTPADLARRYLKEAYRE*
Ga0116105_11922052	3300009624	Peatland	QKRDLAMKKYQTVLAENGSTPPAEKARAHIREAYRE*
Ga0116216_102804083	3300009698	Peatlands Soil	LQKRDLAMKKYETVLAENGGTPFAEKARAHIREAHRE*
Ga0116216_105257263	3300009698	Peatlands Soil	GEMYDLLQKRDLAMKRYQTVLAGNANTGPADQARRYIKEAYRE*
Ga0116217_104682292	3300009700	Peatlands Soil	LLQKRDLAMKKYQTVLAGNANTGPADQARRYIKEAYRE*
Ga0116131_10640773	3300009760	Peatland	YDLLQKRDLAMKKYQTVLAENASTPPAEQARKHIKEAYRE*
Ga0126376_129759072	3300010359	Tropical Forest Soil	MYDLMQKRDLAMRAYAAVLTGRPDSGQADMARRYLKDAYRE*
Ga0126379_117560272	3300010366	Tropical Forest Soil	YDLMQKRELAMRAYEAVLTGRPDSGQADQARRYLKDAYRE*
Ga0126379_122437032	3300010366	Tropical Forest Soil	LQKRDLAMKKYQTVLAENGTTPPADEARKHIREAYRE*
Ga0126379_135788651	3300010366	Tropical Forest Soil	DLLQERDLAMKSYETLLAGNANTGQADQARRYIKEAYRE*
Ga0150983_145717901	3300011120	Forest Soil	DMLQKRDLAMKKYQTVLAENAGTPPAEKAREYIREAYRE*
Ga0137393_110746813	3300011271	Vadose Zone Soil	LMQKRDLAMKKYEIVLAQNGSTPPAELARKHIREAYRE*
Ga0137388_119876571	3300012189	Vadose Zone Soil	MYDLLQKRDLAMKKYQIVLAENAATPPAEQARKHIREAYRE*
Ga0137381_105328631	3300012207	Vadose Zone Soil	GQMYDLLDKRELAMKRYQTVLAGNANTTPADQARRYIKEAYRE*
Ga0164300_101721441	3300012951	Soil	LLQKRDQAMKAYEAVLTGRADSGQADQARRHMKEAYRE*
Ga0164303_101283491	3300012957	Soil	RDLAMKRYETVLAGNANTGPADQARRYIREAYRE*
Ga0164309_119693362	3300012984	Soil	GEMYDLLQKRDLAMKAYEAVLTGRADSGQADLARRHMKEAYRE*
Ga0157373_105711311	3300013100	Corn Rhizosphere	QKRDLAMKRYETVLAGNANTGPADQARRYIREAYRE*
Ga0157372_102338501	3300013307	Corn Rhizosphere	GEMYDLMQQRDLAMKRYETVLAGNANTGPADQARRYIKEAYRE*
Ga0182024_108825701	3300014501	Permafrost	QKRDLAMKKYQTVLAGNANTGPADQARRYIKEAYRE*
Ga0137418_105110183	3300015241	Vadose Zone Soil	GEMYDLLQKRDLAMKKYQSVLAENSSSPPAEQARKHIREAYRE*
Ga0181507_10347263	3300016705	Peatland	NLAAGEMYDLLLRRDLAMKKYETVLAENASTAFAEKAREYIKEAYRE
Ga0187802_103146271	3300017822	Freshwater Sediment	KRDLAMKAYQTVLAGNANTGPADQARRYIKEAYRE
Ga0187853_105476721	3300017940	Peatland	QRDLAMKKYQTVLAENASTPPAEQARKHIKEAYRE
Ga0187778_112842831	3300017961	Tropical Peatland	KANLAAGEVYDLLQKRDLAMKRYQTVLAGNANTGPADQARRYIREAYRE
Ga0187783_103129761	3300017970	Tropical Peatland	MYDLMQKRDLAMKHYETVLAGNANTGPADQARRYIKEAYRE
Ga0187781_111439662	3300017972	Tropical Peatland	LQKRDLAMKRYETVLAGNANTGPADLARRYIKEAYRE
Ga0187782_106567133	3300017975	Tropical Peatland	QKRDLAMKRYETVLAGNANTGPADLARRYIKEAYRE
Ga0187782_108549232	3300017975	Tropical Peatland	LAAGEMYDLLQKRDLAMKKYESVVAENASTPPAEKARQYMKEAYRE
Ga0187816_103575862	3300017995	Freshwater Sediment	YDLLQKRDLAMKRYETVLAGNANTGSADQARRYIKEAYRE
Ga0187868_10867823	3300018002	Peatland	QKRDLAMKHYQIVLAGNANTGPADQARRYIREAYRE
Ga0187872_102658271	3300018017	Peatland	QKRDLAMKKYQTVLAENASTPPAEQARKHIKEAYRE
Ga0187867_100009611	3300018033	Peatland	MYDLLQKRDLAMKKYETVLAENAGTPPAEQARKHIKEAYRE
Ga0187855_108124242	3300018038	Peatland	EMYDLLQNRDLAMKKYQIVLAENGSTPFAEKARAHIREAYRE
Ga0187765_106771093	3300018060	Tropical Peatland	AAGEMYDLLQKRDMAMKAYEAVLTGRADSGQADQARRYIKAAYRE
Ga0187772_104536261	3300018085	Tropical Peatland	AGEMYDLLQKRDLAMKRYETVLAGNANTGPADQARRYIKEAYRE
Ga0187769_104130161	3300018086	Tropical Peatland	ANLAAGEMYDLLQKRDLAMKHYQTVLAGNANTGPADKARQYIKEAYRE
Ga0187771_112935371	3300018088	Tropical Peatland	GEMYDLLQKRDLAMKRYETVLAGNANTGPADQARRYIKEAYRE
Ga0187770_101449964	3300018090	Tropical Peatland	YDLLQKRDLAMKHYQTVLAGNANPGPADKARQYIKEAYRE
Ga0210407_108650032	3300020579	Soil	LLQKRDLAMKKYQTVLAGNANTGPADQARRYIREAYRE
Ga0210400_100528526	3300021170	Soil	APGEMYDLLDKRDLAMKKYQTVLAGNANTTPADQARRYIKEAYRE
Ga0210396_102201325	3300021180	Soil	AAGEMYDLLDKRDLAMKKYQTVLAGNANTGPADQARRYIKDAYRE
Ga0210396_112696022	3300021180	Soil	YDLLDKRDLAMKKYQTVLAGNANTTPADQARRYIKEAYRE
Ga0210388_101619261	3300021181	Soil	GEMYDLLQKRDLAMKKYQSVLAENASTPPADQARKHIREAYRE
Ga0210388_103315563	3300021181	Soil	LQKRDLAMKRYETVLAGNANTGPADQARRYIKEAYRE
Ga0210388_110774111	3300021181	Soil	AAGEMYDLLQKRDLAMKSYQTVLAGNANTGPADLARRYIREAYKE
Ga0210385_100281781	3300021402	Soil	ANLAAGEMYDLMQKRDLAMKSYQMVLAGNANTGPADQARRYIREAYRE
Ga0210385_115594881	3300021402	Soil	QQRELAVKKYQTVLAESNSTPLAEQARRHIKQAYRE
Ga0210383_108585271	3300021407	Soil	EMYDLLQKRDLAMKKYETVLAENSSTPRAEKAREHIREAYRE
Ga0210383_109580282	3300021407	Soil	MYDLLQRRDLAMKKYETVLAENASTPPAEKAREHIKEAYRE
Ga0210383_117274261	3300021407	Soil	GEMYDMLQQRDLAMKKYQTVLAENAATAPAEKARSHIKDAYRE
Ga0210390_101555054	3300021474	Soil	QKRDLAMKKYETVLAENSSTPRAEKAREHIREAYRE
Ga0210390_116094782	3300021474	Soil	MYDLLQKRDLAVKKYEIVLAENAGTAPAEMARKHIREAYRE
Ga0210398_112314881	3300021477	Soil	KRDLAMKKYQSVVAENAGTPPAEQARKHLREAYRE
Ga0210398_113775712	3300021477	Soil	NLAAGEMYDLLQKRDLAMKKYETVLAGNANTTPADQARRYIKEAYRE
Ga0210402_108065161	3300021478	Soil	EMYDLLQKRDLAMKKYQTVLAGNANTGPADQARRYIKEAYRE
Ga0210410_111168671	3300021479	Soil	ANLAAGEMYDLLDKRDLAMKKYQTVLAGNANTTPADQARRYIKEAYRE
Ga0126371_119948362	3300021560	Tropical Forest Soil	AGEMYDLLQKRDLAMKAYHTVLAGNANTGPADLARRYIKEAYRE
Ga0242660_11566532	3300022531	Soil	EMYDLLQKRDLAMKKYQTVLAENGSTPPAEQARRHIREAYRE
Ga0212123_103289452	3300022557	Iron-Sulfur Acid Spring	YDLLKKRDLAMQKYQTVLAGNANTGPADQARRYIKEAYRE
Ga0233357_10536751	3300023056	Soil	AGQMYDLLQKRDLAMQKYQIVLAGNANTGPADQARRYIKEAYRE
Ga0207692_106379532	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MYDLLQKRDLAMKSYETVLEGRADSGQADQARRYIKEAYRE
Ga0207665_107332791	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	QKRDLAMKAYEAVLTGRADSGQADLARRHMKEAYRE
Ga0207679_114636721	3300025945	Corn Rhizosphere	QKRDLAMKRYETVLAGNANTGPADQARRYIREAYRE
Ga0257154_10420641	3300026467	Soil	QQRELAVKKYQTVLAESDSTPLAERARKHIKQAYRE
Ga0209161_104557443	3300026548	Soil	MYDLLQKRDLAMKAYEAVLTGRADSGQADQARRHMKEAYRE
Ga0208239_10207981	3300027168	Forest Soil	QKRDMALQKYQTVLAGNANTTPADLARRYLKEAYRE
Ga0208983_10600361	3300027381	Forest Soil	DLMQKRDLALMKYRTVLAQNSSTPPAEAARKHMREAYRE
Ga0209421_10839511	3300027432	Forest Soil	QKRDLAMKKYETVLAGNANSGPADQARHYIKEAYRE
Ga0207761_10373701	3300027516	Tropical Forest Soil	AAGEVYDLQQKRELAMKAYEAVLTGRADSGQADQARRYLKEAYRE
Ga0209446_11685593	3300027698	Bog Forest Soil	KRDLAMKSYETVLAGNANTGPADLARRYIREAYKE
Ga0209038_102742851	3300027737	Bog Forest Soil	AGEMYDLLQKRDLAMKKYQTVVAENGSTPRAEKAREHIREAYRE
Ga0209039_103365721	3300027825	Bog Forest Soil	NLAAGEMYDLLQKRDLAMKKYQTVLAENSATPRAEKAREHIREAYRE
Ga0209167_108295321	3300027867	Surface Soil	AAGEMYDLMQKRDLAMKRYETVLAGNANTGPADQARRYIKEAYRE
Ga0209465_106422752	3300027874	Tropical Forest Soil	KRDLAMKAYEAVLTGRADSGQADQARRYIREAYRE
Ga0209275_105568761	3300027884	Soil	GEMYDLLQKRDLAVKKYEIVLAENAGTAPAEMARKHIREAYRE
Ga0209624_100009991	3300027895	Forest Soil	DLLQKRDLAMKKYQTVLAGNANTGPADQARRYIKEAYRE
Ga0209624_109484631	3300027895	Forest Soil	EMYDLMQKRDLAMKKYQSVLAENASSPPAEKARQYIREAYRE
Ga0209624_110001971	3300027895	Forest Soil	EMYDILQQRELAVKKYQTVLAESDSTPLAEQARKHIKQAYRE
Ga0265354_10080014	3300028016	Rhizosphere	DLLQKRELAMKKYQSVLAENASTPPAEKAREYIREAYRE
Ga0265356_10074604	3300028017	Rhizosphere	AGEMYDLLQKRDLAMKKYQSVLAENASTPPAEKARQYIREAYRE
Ga0302222_100531043	3300028798	Palsa	KRDLAMEKYETVLAENGSTAPAEQARKHIREAYRE
Ga0302221_101312953	3300028806	Palsa	DLLQKRDLAMQKYQTVLAGNANTTPADQARRYIKEAYRE
Ga0302228_101855483	3300028808	Palsa	MYDLLQKRDLAMQKYQTVLAGNANTTPADQARRYIKEAYRE
Ga0302306_102487421	3300030043	Palsa	EMYDLLQKRDLAMQKYQTVLAGNANTTPADQARRYIKEAYRE
Ga0302192_104561891	3300030507	Bog	LQKRELAMKKYQTVLAENASTPPAEKARQYIREAYRE
Ga0310038_102875981	3300030707	Peatlands Soil	LLQKRDLAMKKYQTVLAGNANTGPADQARRYIKEAYRE
Ga0138301_18424682	3300031022	Soil	LLQKRELAMKKYQTVLAENGSTPPAEQARKHIREAYRE
Ga0170824_1162696211	3300031231	Forest Soil	DLLDKRDLAMKRYETVLAGNANTTPADLARRYIKDAYRE
Ga0307476_102329901	3300031715	Hardwood Forest Soil	AGEMYDLLQKRDLAMKKYQIVLAENGSTPPAEQARKHIREAYRE
Ga0307476_104305671	3300031715	Hardwood Forest Soil	LAAGEMYDLLQKRDLAMKKYQIVLAENASTPPAEQARKHIREAYRE
Ga0307476_110935562	3300031715	Hardwood Forest Soil	DLMQKRDLAMKRYETVLAGNANTGPADQARRYIKEAYRE
Ga0307474_100952391	3300031718	Hardwood Forest Soil	LAAGEMYDLLQKRDLAMKKYQIVLAENGSTPPAEQARKHIREAYRE
Ga0307469_103967553	3300031720	Hardwood Forest Soil	LAAGEMYDLMQKRDLAMKKYQTVLAENGSTPPAERARQHIREAYRE
Ga0307469_115706241	3300031720	Hardwood Forest Soil	MYDLLQKRDLAMKAYEAVLTGRADSGQADLARRHMKEAYRE
Ga0307477_108825002	3300031753	Hardwood Forest Soil	KRDLAMKKYQTVLAQNGSTPPAEEARRHLKDAYRE
Ga0307478_106018881	3300031823	Hardwood Forest Soil	KRDLAMKKYQIVLAENGSTPCAEEARKHIRDAYRE
Ga0307479_102142541	3300031962	Hardwood Forest Soil	LAAGEMYDLLQKRDLAMKKYQTVLAENGSTPPAERARKHIREAYRE
Ga0307479_118687761	3300031962	Hardwood Forest Soil	EMYDLLQKRDLAMKKYQIVLAQNGSTPPAEQARKHIREAYRE
Ga0318504_106222852	3300032063	Soil	MYDLMQKRELAMRAYEAVLTGRPDSGQADQARRYLKDAYRE
Ga0306920_1012237081	3300032261	Soil	EVYDLQQKRDLAMKAYEAVLTGRADSGQADQARRYLKDAYRE
Ga0348332_120105601	3300032515	Plant Litter	LQKRDLAMKKYQTVLAENASTPPAEKAREHIREAYRE
Ga0348332_127015431	3300032515	Plant Litter	EMYDLLQKRDLAMKKYQTVLAGNASTGPADQARRYIKEAYRE
Ga0335085_102949874	3300032770	Soil	ANLAAGEVYDLLQKRDLAMKSYETVLEGRADSGQADLARRYIKEAYRE
Ga0335080_110948983	3300032828	Soil	NLAAGEMYDLLQKRDLAMKKYETVLAGNANTGPADQARRYIREAYRE
Ga0335081_119031141	3300032892	Soil	MQKRDQAMKSYQTVLAGRPDTGPADLARRYIKDAYRE
Ga0335071_1001260310	3300032897	Soil	QKRDLAMKSYETVLEGRADSGQADLARRYIKEAYRE
Ga0310914_108143032	3300033289	Soil	NLAAGEMYDLLQKRDMAMKAYEAVLTGRADSGQADQARRYIKEAYRE
Ga0316214_10506293	3300033545	Roots	LYDLMQKRDLAMKSYQMVLAGNANTGPADQARRYIREAYRE
Ga0326724_0485814_506_631	3300034091	Peat Soil	MYDLMQKRDLAMKKYEIVVAQNANTGPADQARRYIKEAFRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060665

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences