Metagenome Family F060656

Basic Information
Family ID	F060656
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	92 residues
Representative Sequence	MEADGSVRIAWNADGFEAIHVYARFWPSTEVSRRAQEVADVALTNRTVHDLRRGLRALFGGGFQLQAPDEDAPDRRVAVFFDPPRGTPNPDPY
Number of Associated Samples	107
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.15 %
% of genes near scaffold ends (potentially truncated)	42.42 %
% of genes from short scaffolds (< 2000 bps)	80.30 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Most Common Taxonomy
Group	Bacteria (81.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.909 % of family members)
Environment Ontology (ENVO)	Unclassified (21.970 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.061 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.97% β-sheet: 19.83% Coil/Unstructured: 56.20%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
d.260.1.0: automated matches	d6lpha_	6lph	0.59641
d.391.1.0: automated matches	d6j09a1	6j09	0.57612
d.153.1.1: Class II glutamine amidotransferases	d1te5a_	1te5	0.57164
a.211.1.8: HD domain from Cmr2-like	d4w8ya1	4w8y	0.57011
d.154.1.2: ArgJ-like	d1vz6a_	1vz6	0.56761

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01183	Glyco_hydro_25	38.17
PF00246	Peptidase_M14	31.30
PF01380	SIS	2.29
PF01625	PMSR	1.53
PF00730	HhH-GPD	0.76
PF07681	DoxX	0.76
PF06778	Chlor_dismutase	0.76
PF00903	Glyoxalase	0.76
PF05099	TerB	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	38.17
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	1.53
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.76
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.76
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.76
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.76
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.76
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.76
COG3253	Coproheme decarboxylase/chlorite dismutase	Coenzyme transport and metabolism [H]	0.76
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.76
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.82 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.82 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.82 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.06 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.48 %
Unclassified	root	N/A	18.18 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.18 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.67 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.18 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.61 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.03 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.18 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.61 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.03 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.18 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.61 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.03 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.52 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103360675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3502	Open in IMG/M
3300000956\|JGI10216J12902_103715711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2142	Open in IMG/M
3300002071\|JGIcombinedJ21915_10300659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300002549\|JGI24130J36418_10024694	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300002568\|C688J35102_120284624	All Organisms → cellular organisms → Bacteria → Terrabacteria group	967	Open in IMG/M
3300003991\|Ga0055461_10163417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300004000\|Ga0055458_10012154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1734	Open in IMG/M
3300004081\|Ga0063454_100222654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1098	Open in IMG/M
3300004081\|Ga0063454_100430965	All Organisms → cellular organisms → Bacteria → Terrabacteria group	897	Open in IMG/M
3300004114\|Ga0062593_100747126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	963	Open in IMG/M
3300004145\|Ga0055489_10080078	All Organisms → cellular organisms → Bacteria → Terrabacteria group	921	Open in IMG/M
3300004153\|Ga0063455_101480905	All Organisms → cellular organisms → Bacteria → Terrabacteria group	528	Open in IMG/M
3300004156\|Ga0062589_100263713	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300004156\|Ga0062589_100923387	Not Available	806	Open in IMG/M
3300004157\|Ga0062590_102226150	Not Available	574	Open in IMG/M
3300004463\|Ga0063356_104355775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300004479\|Ga0062595_100581031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300004480\|Ga0062592_102027509	Not Available	569	Open in IMG/M
3300004643\|Ga0062591_102987423	Not Available	502	Open in IMG/M
3300005093\|Ga0062594_100295319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1227	Open in IMG/M
3300005093\|Ga0062594_103078162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300005437\|Ga0070710_10832669	All Organisms → cellular organisms → Bacteria → Terrabacteria group	661	Open in IMG/M
3300005458\|Ga0070681_11466048	Not Available	607	Open in IMG/M
3300006055\|Ga0097691_1053798	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300006876\|Ga0079217_10686464	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006894\|Ga0079215_10446009	Not Available	784	Open in IMG/M
3300006918\|Ga0079216_10075685	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1552	Open in IMG/M
3300009131\|Ga0115027_11803097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300009840\|Ga0126313_10931539	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300009873\|Ga0131077_10805577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	821	Open in IMG/M
3300010401\|Ga0134121_11238119	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300012092\|Ga0136621_1006831	All Organisms → cellular organisms → Bacteria	4722	Open in IMG/M
3300012092\|Ga0136621_1121156	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1057	Open in IMG/M
3300012092\|Ga0136621_1374878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300012185\|Ga0136619_10240192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300012186\|Ga0136620_10255474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	766	Open in IMG/M
3300012188\|Ga0136618_10000083	All Organisms → cellular organisms → Bacteria	22890	Open in IMG/M
3300012212\|Ga0150985_111721020	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1076	Open in IMG/M
3300012469\|Ga0150984_111222023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	557	Open in IMG/M
3300012469\|Ga0150984_113563884	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300012679\|Ga0136616_10434323	Not Available	596	Open in IMG/M
3300012680\|Ga0136612_10553302	Not Available	585	Open in IMG/M
3300012681\|Ga0136613_10205065	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300012681\|Ga0136613_10775797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300012684\|Ga0136614_11020426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300012900\|Ga0157292_10013809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1838	Open in IMG/M
3300012910\|Ga0157308_10150459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300012914\|Ga0157297_10318170	All Organisms → cellular organisms → Bacteria → Terrabacteria group	593	Open in IMG/M
3300012931\|Ga0153915_10382654	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300012955\|Ga0164298_11532984	All Organisms → cellular organisms → Bacteria → Terrabacteria group	522	Open in IMG/M
3300012960\|Ga0164301_10700994	All Organisms → cellular organisms → Bacteria → Terrabacteria group	762	Open in IMG/M
3300012989\|Ga0164305_12024201	Not Available	526	Open in IMG/M
3300013307\|Ga0157372_12975009	All Organisms → cellular organisms → Bacteria → Terrabacteria group	542	Open in IMG/M
3300013766\|Ga0120181_1070491	All Organisms → cellular organisms → Bacteria → Terrabacteria group	771	Open in IMG/M
3300013772\|Ga0120158_10047086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3033	Open in IMG/M
3300014498\|Ga0182019_10852058	Not Available	655	Open in IMG/M
3300014498\|Ga0182019_10852058	Not Available	655	Open in IMG/M
3300014502\|Ga0182021_10014147	All Organisms → cellular organisms → Bacteria	9485	Open in IMG/M
3300014502\|Ga0182021_10540156	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300015077\|Ga0173483_10471801	All Organisms → cellular organisms → Bacteria → Terrabacteria group	662	Open in IMG/M
3300015158\|Ga0167622_1009825	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300015371\|Ga0132258_10095569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	6984	Open in IMG/M
3300015371\|Ga0132258_10109456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6535	Open in IMG/M
3300015371\|Ga0132258_10117377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6315	Open in IMG/M
3300015371\|Ga0132258_10139156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5805	Open in IMG/M
3300015373\|Ga0132257_100259547	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300015374\|Ga0132255_103809564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	641	Open in IMG/M
3300017787\|Ga0183260_10000921	All Organisms → cellular organisms → Bacteria	24936	Open in IMG/M
3300017787\|Ga0183260_10006005	All Organisms → cellular organisms → Bacteria	9513	Open in IMG/M
3300017789\|Ga0136617_10236643	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300017789\|Ga0136617_11461173	All Organisms → cellular organisms → Bacteria → Terrabacteria group	509	Open in IMG/M
3300017959\|Ga0187779_10293795	Not Available	1038	Open in IMG/M
3300018422\|Ga0190265_11785641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300018432\|Ga0190275_10817798	Not Available	996	Open in IMG/M
3300018432\|Ga0190275_11112051	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300018476\|Ga0190274_12447430	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300018481\|Ga0190271_12240156	All Organisms → cellular organisms → Bacteria → Terrabacteria group	652	Open in IMG/M
3300021082\|Ga0210380_10260624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300024430\|Ga0196962_10036170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1484	Open in IMG/M
3300025167\|Ga0209642_10140766	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300025319\|Ga0209520_10638361	Not Available	608	Open in IMG/M
3300025322\|Ga0209641_10014720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6171	Open in IMG/M
3300025325\|Ga0209341_10022777	All Organisms → cellular organisms → Bacteria	5366	Open in IMG/M
3300025326\|Ga0209342_10210545	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1727	Open in IMG/M
3300025327\|Ga0209751_11046241	All Organisms → cellular organisms → Bacteria → Terrabacteria group	613	Open in IMG/M
3300025553\|Ga0208080_1047881	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1121	Open in IMG/M
3300025725\|Ga0209638_1000064	All Organisms → cellular organisms → Bacteria	66420	Open in IMG/M
3300025801\|Ga0210097_1076201	All Organisms → cellular organisms → Bacteria → Terrabacteria group	770	Open in IMG/M
3300025888\|Ga0209540_10085612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1935	Open in IMG/M
3300025888\|Ga0209540_10120105	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1605	Open in IMG/M
3300025912\|Ga0207707_11343495	Not Available	572	Open in IMG/M
3300027650\|Ga0256866_1132940	All Organisms → cellular organisms → Bacteria → Terrabacteria group	674	Open in IMG/M
3300027876\|Ga0209974_10002817	All Organisms → cellular organisms → Bacteria	6310	Open in IMG/M
3300027886\|Ga0209486_10988086	All Organisms → cellular organisms → Bacteria → Terrabacteria group	564	Open in IMG/M
3300028558\|Ga0265326_10226567	Not Available	538	Open in IMG/M
3300028666\|Ga0265336_10258210	Not Available	517	Open in IMG/M
3300029987\|Ga0311334_11722297	Not Available	534	Open in IMG/M
3300029990\|Ga0311336_11435216	All Organisms → cellular organisms → Bacteria → Terrabacteria group	606	Open in IMG/M
3300030006\|Ga0299907_10036969	All Organisms → cellular organisms → Bacteria	3822	Open in IMG/M
3300030048\|Ga0302273_1149768	All Organisms → cellular organisms → Bacteria → Terrabacteria group	685	Open in IMG/M
3300030606\|Ga0299906_10746340	Not Available	731	Open in IMG/M
3300030606\|Ga0299906_10783126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300030613\|Ga0299915_10568381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300030619\|Ga0268386_10043769	All Organisms → cellular organisms → Bacteria	3532	Open in IMG/M
3300030619\|Ga0268386_10122579	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1998	Open in IMG/M
3300030620\|Ga0302046_10283683	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300031229\|Ga0299913_10382404	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1395	Open in IMG/M
3300031229\|Ga0299913_11264287	All Organisms → cellular organisms → Bacteria → Terrabacteria group	696	Open in IMG/M
3300031229\|Ga0299913_11542199	All Organisms → cellular organisms → Bacteria → Terrabacteria group	617	Open in IMG/M
3300031232\|Ga0302323_101415282	All Organisms → cellular organisms → Bacteria → Terrabacteria group	781	Open in IMG/M
3300031235\|Ga0265330_10434337	Not Available	557	Open in IMG/M
3300031241\|Ga0265325_10009419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5699	Open in IMG/M
3300031247\|Ga0265340_10021671	All Organisms → cellular organisms → Bacteria	3294	Open in IMG/M
3300031281\|Ga0307420_1042348	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1684	Open in IMG/M
3300031595\|Ga0265313_10189087	All Organisms → cellular organisms → Bacteria → Terrabacteria group	862	Open in IMG/M
3300031722\|Ga0311351_10472103	All Organisms → cellular organisms → Bacteria → Terrabacteria group	952	Open in IMG/M
3300031902\|Ga0302322_100402799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1570	Open in IMG/M
3300031908\|Ga0310900_11915255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300031949\|Ga0214473_10009037	All Organisms → cellular organisms → Bacteria	11783	Open in IMG/M
3300031949\|Ga0214473_10314900	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300032012\|Ga0310902_10534613	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300032075\|Ga0310890_11024644	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300032173\|Ga0315268_12670072	Not Available	513	Open in IMG/M
3300032770\|Ga0335085_11913660	All Organisms → cellular organisms → Bacteria → Terrabacteria group	604	Open in IMG/M
3300032782\|Ga0335082_10019373	All Organisms → cellular organisms → Bacteria	7360	Open in IMG/M
3300033004\|Ga0335084_11897320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300033233\|Ga0334722_11025026	Not Available	580	Open in IMG/M
3300033417\|Ga0214471_10199045	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300033433\|Ga0326726_10310638	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1481	Open in IMG/M
3300033433\|Ga0326726_10513780	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1147	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.61%
Host-Associated	Host-Associated	13.64%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	18.94%
Plants	Host-Associated → Plants	13.64%
Wastewater	Engineered → Wastewater	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.61%
Freshwater	Environmental → Aquatic → Freshwater	15.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.82%
Peat	Environmental → Terrestrial → Peat	6.06%
Marine	Environmental → Aquatic → Marine	3.79%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.70%
Ice	Environmental → Aquatic → Freshwater → Ice	11.36%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.30%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Lake	Environmental → Aquatic → Freshwater → Lake	1.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.94%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	11.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.06%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	5.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.30%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.03%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.76%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.91%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	11.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.82%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	5.30%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	3.79%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.79%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.03%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.03%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.27%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.52%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.52%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.76%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002071	Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003991	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1	Environmental	Open in IMG/M
3300004000	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025801	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030048	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031281	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-40	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1033606753	3300000956	Soil	MESDGSIRIAWHAEGFEAIHVYARFWPNDELARRAGAVADIALTNRTVHDLRRGLRQLFGAEVELQSPDEDAPDRRVAVFFAPPRGTPNPDDD*
JGI10216J12902_1037157113	3300000956	Soil	MQEDDSVRIAWTAEGFEAIHVYARFWPPEEIRRRAQGVADVALMNRNVHDLRRGLRERFGGSFSLHAPDEDAPDRRVAVFFDPPIGPPNPEAA*
JGIcombinedJ21915_103006592	3300002071	Arctic Peat Soil	MESDGSVRIAWSADGYEAIHVYARFWPSPVVAERAQGVADVALTNRTVHDLRVGLRDRFGAAFQLQAPDEDAPDRRVAIFFDPPRGKPNPDPW*
JGI24130J36418_100246942	3300002549	Arctic Peat Soil	MESDGSVRIAWAADGYEAIHVYARFWPSPVVAERAQDVADVALTNRTVHDLRVGLRDRFGAAFQLQAPDEDAPDRRVAIFFDPPRGKPNPDPW*
C688J35102_1202846242	3300002568	Soil	DGSVRIAWNADGFEAIHVYARFWPSVVVAERAQEVADVALTNRTVHDLRRGLRAHFGGDFQLQAPDEDAPDRRVAIFFDPPRGTPNPDDS*
Ga0055461_101634172	3300003991	Natural And Restored Wetlands	SVRIAWLADGFEAIHVYARFRPSTEVAERALVVADVALTNRTVHDLRRGLRARFGGAFQLQAPDEDAPDRRIAIFFDPPAGNPNPDD*
Ga0055458_100121542	3300004000	Natural And Restored Wetlands	VESDGSVRIAWLADGFEAIHVYARFRPSTEVAERALVVADVALTNRTVHDLRRGLRARFGGAFQLQAPDEDAPDRRIAIFFDPPAGNPNPDD*
Ga0063454_1002226542	3300004081	Soil	MESDGSVRIAWNADGFEAIHVYARFWPSSVAAARAQDVADVALTNRTVHDLRRGLRAQFGGAFQLQAPDEDAPDRRVAIFFDPPHGTPNPDDV*
Ga0063454_1004309652	3300004081	Soil	VESDGSVRIAWNADGFEAIHVYARFWPSVVVAERAQEVADVALTNRTVHDLRRGLRAHFGGDFQLQAPDEDAPDRRVAIFFDPPRGTPNPDDS*
Ga0062593_1007471262	3300004114	Soil	METDGSVRIAWNAEGFEAIHVYARFWPSDEVHRRAQGVADVALTNRTVHDLRRGLRAHFGGGFDLQAPDEDAPDRRVAVFFDPPRGIPNPDDG*
Ga0055489_100800781	3300004145	Natural And Restored Wetlands	VEQDGSVRIAWDAEGFEAIHVYARFWPADEVQRRAQGVADVALTNRTVPDLRRGLRAAFGGSFSFQAPDEDAPDRRVAIFFDPP
Ga0063455_1014809052	3300004153	Soil	IAWNADGFEAIHVYARFWPSSVAAARAQDVADVALTNRTVHDLRRGLRAQFGGAFQLQAPDEDAPDRRVAIFFDPPHGTPNPDDV*
Ga0062589_1002637131	3300004156	Soil	VENDGSIRIAWNAEGFEAIHVYARFWPNDELARRAGVVADIALTNRTVHDLRRGLRERFAADFELQSPDEDAPDRRVAIFFAPPRGVPNPDPV*
Ga0062589_1009233872	3300004156	Soil	LADGFVAIHVYARFWPSTEVAQRAAGVADIALTNRTLHDLRRGLRQHFGSGFTLQAPDEDAPDRRVAVFFDPPVGPPNPDET*
Ga0062590_1022261502	3300004157	Soil	VYARFWPSHEVSRRAAAVADIALTNRTLHDLRRGLRQRFASGFSLQAPDEDAPDRRVAVFFDPPVGPPNPDDT*
Ga0063356_1043557752	3300004463	Arabidopsis Thaliana Rhizosphere	MQEDDSVRIAWAAEGFEAIHVYARFWPPEEVRRRAQGVADVALMNRNVHDLRRGLRQTFGGTFSLQAPDEDAPDKRVAVYFDPPRGEPNPNDD*
Ga0062595_1005810312	3300004479	Soil	METDGSVRIAWNAEGFEAIHVYARFWPSEEVHRRAQGVADVALTNRTVHDLRRGLRAHFGGGFDLQAPDEDAPDRRVAVFFDPPRGIPNPDDG*
Ga0062592_1020275092	3300004480	Soil	MQEDDSVRIAWAAEGFEAIHVYARFWPPDEVRRRAQGVADVALMNRNLHDLRRGLRQTFGGTFTLQAPDEDAPDKRVAVYFDPPRGEPNPVDD*
Ga0062591_1029874232	3300004643	Soil	MEQDGSIRIAWNAEGFEAIHVYARFWPNEELSLRAQAVADVALTNRTVHDLRRGLRQLFHSDFELQAPDERAPDRRVAIFFVPPRGVPNPDDDY*
Ga0062594_1002953192	3300005093	Soil	VENDGSIRIAWNAEGFEAIHVYARFWPNDELARRAGVVADIALTNRTVHDLRRGLRERFAAEFELQSPDEDAPDRRVAIFFAPPRGVPNPDPV*
Ga0062594_1030781621	3300005093	Soil	GRGGRHQEGSDGDKRHNHAVQEDDSVRIAWLADGFVAIHVYARFWPSTEVASRAAGVADIALTNRTLHDLRRGLRQRFGSGFSLQAPDEDAPDRRVAVFFDPPVGPPNPDET*
Ga0070710_108326691	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VRIAWNADGFEAIHVYARFWPSYVVSERAQSVADVALTNRTIHDLRRGLRALFGGGFQLQAPDEDAPDRRVAIYFDPPAGTPNPDDD*
Ga0070681_114660481	3300005458	Corn Rhizosphere	NRQRSDKRHNQPMQEDDSIRIAWLADGFVAIHVYARFWPSTEVAQRAAGVADIALTNRTLHDLRRGLRQRFGSGFTLQAPDEDAPDRRVAVFFDPPVGPPNPDET*
Ga0097691_10537982	3300006055	Arctic Peat Soil	MEADGSVRIAWIADGFEAIHVYARFWPSTEVSRRAQEVADVALTNRTVHDLRRGLRALFGGGFQLQAPAEDAPDRRVAVFFDPPRGTPN
Ga0079217_106864642	3300006876	Agricultural Soil	MDGSVRIAWNAEGFEAIHVYARFWPSDEVQRRAQGVADVALTNRTIHDLRRGLRQLFGGSFSLQAPDEDAPDRRVAVFFDPPRGEPNPDPR*
Ga0079215_104460091	3300006894	Agricultural Soil	DSVPIAWLADGFEAIHVYARFWPSAEVASRAAAVADICLTNRTLHDLRRGLRQRFGSSFTLRVPDRDAPDRRVAVFFDPPVGPPNPDET*
Ga0079216_100756852	3300006918	Agricultural Soil	MDNWPVEPDGSIRIHWQAEGYEAIHVYGHFWPAEEVRRRAGAVADVALTNRTVHDLRRGLRQHFGGSFDLRAPDEAAPDRRVVVSFHPPPGRPNPDPGV*
Ga0115027_118030972	3300009131	Wetland	GSVRIAWQAEGFVAIHVYARFWPSGEVARRASGVADVALTNRTVHDLRRGLRQHFGGGFTLQAPDEDAPDRRVAVFFDPPVGEPNPDEG*
Ga0126313_109315391	3300009840	Serpentine Soil	MERDGSIRIAWNAEGFEAIHVYARFWSNEELSRRAQEVADVALTNRTVHDLRRGLRVRFSAADFDLQSPDEDAPDRRIAVFFA
Ga0131077_108055772	3300009873	Wastewater	MEQDGSVRIAWLAEGYEAIHVYARFWPPDELARRASRVADVALTNRTVHDLRRGLRAAFGGTFTLEAPDEDAIDGRVVIYFDPPAGEPNPDI*
Ga0134121_112381192	3300010401	Terrestrial Soil	VEEDGSVRIAWQADGFVAIHVYARFWPSDEVARRAAGVADVALTNRTVHDLRRGLRLHFGGTFSLQAPDEDAPDRRVAVFFDPPIGPPNEESD*
Ga0136621_10068313	3300012092	Polar Desert Sand	MEPDGSMRISWSAEGFEAIHVYARFWSLGELQRRAEAVADVALTNRTVHDLRRGLRQLFGGSFELQAPDEDAPDKRVAVFFDPPAGNPNPDPY*
Ga0136621_11211563	3300012092	Polar Desert Sand	FEAIHVYARFWPGDEVQRRAQGVADVALMNRTVHDLRSGLRQLFGGGFDLHALDADAPDRRVAVFFDPPRGTPNPDPDY*
Ga0136621_13748782	3300012092	Polar Desert Sand	GMEADGSVRIAWQAEGFEAIYVYARFWPGDEVLRRAQGVADVALMNRTVHDLRRGLRQVFGGAFDLHAPDADAPDRRVAVFFDPPRGTPNPDPDY*
Ga0136619_102401922	3300012185	Polar Desert Sand	MEPDGSMRIAWLAEGFEAIHVYARFWSLNELQHRAEGVADVALTNRTVHDLRRGLRQRFGGSFDLQAPDEDAPDKRVAVFFDPPAGNPNPDPY*
Ga0136620_102554742	3300012186	Polar Desert Sand	MEPDGSMRISWSAEGFEAIHVYARFWSLGELQRRAQGVADVALTNRTVHDLRRGLRQRFGGSFELQAPDEDAPDKRVAVFFDPPAGNPNPDPY*
Ga0136618_1000008311	3300012188	Polar Desert Sand	MEADGSVRIAWNAEGYEAIHVYARFWPGDEVQRRAQGVADVALMNRTVHDLRRGLRQAFGGGFDLHAPDPDAPDNRVAIFFDPPRGTPNPDPDY*
Ga0150985_1117210201	3300012212	Avena Fatua Rhizosphere	DGFEAIHVYARFWPSAIVAERAQEVADVALTNRTVHDLRRGLRAHFGGEFQFQAPDEDAPDRRVAIFFDPPRGTPNPDDV*
Ga0150984_1112220232	3300012469	Avena Fatua Rhizosphere	VRIAWNADGFEAIHVYARFWPSSVAAERAQEVADVALTNRTVHDLRRGLRAHFGGGFQLQAPDEDAPDRRVAIFFDPPRGTPNPDDV*
Ga0150984_1135638841	3300012469	Avena Fatua Rhizosphere	VESDGSVRIAWNADGFEAIHVYARFWPSAIVAERAQEVADVALTNRTVHDLGRGLRAHFGGEFQLQAPDEDAPDRRVAIFFDPP
Ga0136616_104343232	3300012679	Polar Desert Sand	MEADGSVRIAWQAEGFEAIYVYARFWPGDEVLRRAQGVADVALMNRTVHDLRRGLRQVFGGAFDLHAPDADAPDRRVAVFFDPPRGTPNPDPDY*
Ga0136612_105533021	3300012680	Polar Desert Sand	TDSYCARENWGMEPDGSVRIAWQAEGFEAIHVYARFWPGDEVHRRAQGVADVALMNRTVHDLRSGLRQRFGGDFALHAPAADAPDRRVAIFFDPPRGTPNPDPGF*
Ga0136613_102050651	3300012681	Polar Desert Sand	MEADGSVRIAWQAEGFEAIYVYARFWPGDEVLRRAQGVADVALMNRTVHDLRRGLRQVFGGAFDLHAPDADAPDRRVAVF
Ga0136613_107757972	3300012681	Polar Desert Sand	DGSVRIAWHAEGFEAIHVYARFWPGDEVQRRAQGVADVALMNRTVHDLRSGLRQLFGGGFDLHAPDADAPDRRVAIFFDPPRGTPNPDPDY*
Ga0136614_110204261	3300012684	Polar Desert Sand	MEADGSVHIAWLADGFEAIHVYARFWPTDEVQRRAQGVADVALMNRTVHDLRRGLRQAFGGGFDLHAPAADTPDRRVAVFFDPPMGTPNPDPDY*
Ga0157292_100138093	3300012900	Soil	LRQSGVSYCFTQNWGVEQDGSIRIAWSAEGFEAIHVYARFWPNSELSLRAQEVADVALTNRTVHDLRRGLRQRFGADFELQAPDEDAPDRRVAVFFAPPRGVPNPDFD*
Ga0157308_101504591	3300012910	Soil	DGSIRIAWSAEGFEAIHVYARFWPNSELSLRAQEVADVALTNRTVHDLRRGLRQRFGADFELQAPDEDAPDRRVAVFFAPPRGVPNPDFD*
Ga0157297_103181701	3300012914	Soil	IHVYARFWPNEELSLRAQQVADVALTNRTVQDLRRGLRERFGAAEFEFQSPDEDAPDRRVAIFFVPPRGVPNPDDE*
Ga0153915_103826542	3300012931	Freshwater Wetlands	VQEDGSVRIAWQADGFEAIHVYARFWPSTEVARRAQDVADVALVNRNVHDLRRGLRQRFGSSFSLQAPDEDAADRRIAVFFDPPVGPPNPDEG*
Ga0164298_115329841	3300012955	Soil	VESDGSVRIAWNADGFEAIHVYARFWPSYVVSERAQSVADVALTNRTIHDLRRGLRALFGGGFQLQAPDEDAPDRRVAIYFDPPAGTPNPDDD*
Ga0164301_107009942	3300012960	Soil	NWGVESDGSVRIAWNADGFEAIHVYARFWPSYVVSERAQSVADVALTNRTVHDLRRGLRALFGGGFQLQAPDEDAPDRRVAIYFDPPAGTPNPDDD*
Ga0164305_120242011	3300012989	Soil	MESDGSVRISWTADGYEAIHVYARFWPSTVASDRAQEVADIALTNRTVHDLRRGLRAQFGGGFQLRAPDEHAPDRRVA
Ga0157372_129750092	3300013307	Corn Rhizosphere	VRIAWNADGFEAIHVYARFWPSYVVSERAQSVADVALTNRTVHDLRRGLRGLFGGSFQLQAPDEDAPDHRVAIW*
Ga0120181_10704911	3300013766	Permafrost	WNADGFEAIHVYARFWPSTVVAERAHDVADIALTNRTVHDLQRGLRALYGGTFQLQAPDEAARDRRVAVFFDPPRGTPNPDGY*
Ga0120158_100470863	3300013772	Permafrost	VESDGSVRIAWNADGFEAIHVYARFWPSTVVAERAHDVADIALTNRTVHDLRRGLRALFGGTFQLQAPDEAAPDRRVAVFFDPPRGTPNPDGY*
Ga0182019_108520581	3300014498	Fen	VYARFWPSRVVAERAHDVADVALTNRTVHDLRRGLRARFGGEFQLQAPDEDAPDRRVAIFFDPPRGTPNPDPY*
Ga0182019_108520582	3300014498	Fen	NADGYEAIHVYARFWPSRVVAERAHDVADVALTNRTVHDLRRGLRARFGGEFQLQAPDEDAPDRRVAIFFDPPRGTPNPDPY*
Ga0182021_1001414710	3300014502	Fen	MESDGSVRIAWNADGYEAIHVYARFWPSRVVAERALDVADVALTNRTVHDLRRGLRARFGGEFQLQAPDEDAPDRRVAIFFDPPRGEPNPDPY*
Ga0182021_105401562	3300014502	Fen	VEEDGSVRIAWQADGFVAIHVYARFWPSDEVSRLASGVADVALTNRTVHDLRRGLRQLFGGTFSLQAPDEDAPDRRVAVFFDPPVGPPNPELD*
Ga0173483_104718011	3300015077	Soil	VEQDGSIRIAWSAEGFEAIHVYARFWPNSELSLRAQEVADVALTNRTVHDLRRGLRQRFGADFELQAPDEDAPDRRVAVFFAPPRGVPNPDFD*
Ga0167622_10098252	3300015158	Glacier Forefield Soil	VESDGSVRIAWNAEGFEAIHVYARFWPSYVVAERAQDVADVALTNRTVHDLRRGLRARFGGDFQMQAPDEDAPDRRVAVFFDPPRGSPNPDDY*
Ga0132258_100955694	3300015371	Arabidopsis Rhizosphere	VRIAWNADGFEAIHVYARFWPSYVVSERAQSVADVALTNRTVHDLRRGLRGLFGGSFQLQAPDEDAPDHRVAIYFDPPAGTPNPEDD*
Ga0132258_101094565	3300015371	Arabidopsis Rhizosphere	MEADGSIRIAWNADGFEAIHVYARFWPNEELSLRAQGVADVALTNRTVHDLRRGLRLHFGGGFQLQAPDEDAPDRRVAVFFDPPRGVPNPDND*
Ga0132258_101173774	3300015371	Arabidopsis Rhizosphere	MEADGSVRIAWNAEGFEAIHVYARFWPAGELSRRAQAVADIALTNRTVHDLRRGLRQRYGGGFQVQAPDEDAPDRRVAVFFDPPRGEPNPDDD*
Ga0132258_101391567	3300015371	Arabidopsis Rhizosphere	MEADGSVRIAWNADGFEAIHVYARFWPNDELSRRAQGVADVALTNRTVHDLRRGLRLHFGGGFQLQAPDEDAPDRRVAVFFDPPRGVPNPDND*
Ga0132257_1002595472	3300015373	Arabidopsis Rhizosphere	MEADGSIRIAWNADGFEAIHVYARFWPNEELSLRARGVADVALTNRTVHDLRRGLRLHFGGGFQLQAPDEDAPDRRVAVFFDPPRGVPNPDND*
Ga0132255_1038095641	3300015374	Arabidopsis Rhizosphere	VESDGSVRIAWNAEGFEAIHVYARFWPSTVVAERAQDVADVALTNRTVHDLRRELRARFGGAFQLQAPDEDAPDRRVAVFFDPPRGTPNPDDY*
Ga0183260_1000092121	3300017787	Polar Desert Sand	MEADGSVRIAWQAEGFEAIYVYARFWPGDEVLRRAQGVADVALMNRTVHDLRRGLRQVFGGAFDLHAPDADAPDRRVAVFFDPPRGTPNPDPDY
Ga0183260_100060056	3300017787	Polar Desert Sand	MEADGSVRIAWNAEGYEAIHVYARFWPTDEVQRRAQGVADVALMNRTVHDLRRGLRQAFGGGFDLHAPDPDAPDHRVAIFFDPPRGTPNPDPDY
Ga0136617_102366432	3300017789	Polar Desert Sand	MRIAWLAEGFEAIHVYARFWSLNELQHRAEGVADVALTNRTVHDLRRGLRQRFGGSFDLQAPDEDAPDRRVAVFFHPPRGEPNPDEY
Ga0136617_114611732	3300017789	Polar Desert Sand	NWGMEADGSVRIAWNAEGYEAIHVYARFWPTDEVQRRAQGVADVALMNRTVHDLRRGLRQALGGGFDLHAPDPDAPDHRVAIFFDPPRGTPNPDPDY
Ga0187779_102937952	3300017959	Tropical Peatland	VESDGSVRIAWNADGYVAIHVYARFWPSNVVTDRAQLVADVALTNRTVHDLRRGLRARFGAGFQLQAPDEDAPDRRVAIFFDPPRGVPNPDAD
Ga0190265_117856412	3300018422	Soil	GFEAIHVYARFWPSHEVARRASVVADVALTNRTVHDLRRGLRAEFGADFQLQAPNEDAPDRRVAIFFDPPPGEPNPDEF
Ga0190275_108177982	3300018432	Soil	QRALWYQARQNWGVESDGSVRIAWAAEGFEAIHVYARFWPAEEVSRRASGVADVALTNRTVHDLRRGLRALYGGTFQLQAPDEDAPDRRVAIFFDPPRGEPNPDEY
Ga0190275_111120512	3300018432	Soil	MEHDGSVRIAWSAEGFEAIHVYARFWPSEEVQRRAQGVADVALTNRTVHDLRSGLRERFGGTFSLQAPDEDAPDRRVAVFFDPPRGEPNPDV
Ga0190274_124474301	3300018476	Soil	QSGVSYCFTQNWGVEQDGSIRIAWSAEGFEAIHVYARFWPNSELSLRAQEVADVALTNRTVHDLRRGLRQRFGADFELQAPDEDAPDRRVAVFFAPPRGVPNPDADF
Ga0190271_122401561	3300018481	Soil	FEAIHVYARFWSNEELSLRAQAVADVALTNRTVHDLRRGLRQRFHSDFELQAPDEDAPDRRVAVFFVPPRGVPNPDAEY
Ga0210380_102606242	3300021082	Groundwater Sediment	MEQDGSIRIAWNAEGFEAIHVYARFWPNEELSLRAQAVADVALTNRTVHDLRRGLRQLFHSDFELQAPDERAPDRRVAIFFVPPRGVPNPDDI
Ga0196962_100361702	3300024430	Soil	VRIYWQVEGFDAIHVYARFWPSEEVQRRASAVADVALTNRTVHDLRRGLRQRFGGTFSLQAPDEDAPDRRVAVFFDPPAGVPNPDD
Ga0209642_101407662	3300025167	Soil	VEDDGSVRIHWQAEGFVAIHVYARFWPSSEVARRASGVADVALTNRTVHDLRRGLRQHFGGGFTLQAPDEDAPDRRVAVFFDPPVGQPNPDEV
Ga0209520_106383612	3300025319	Soil	VRIAWQADGFEAIHVYARFWPPVEVARRARGVADVALVNRTVHDLRRGLRQLFGGTFSLQAPDEDAPDRRVAVFFDPPVGTPNPDEV
Ga0209641_100147206	3300025322	Soil	VEDDGSVRIHWQAEGFVAIHVYARFWSSSEVARRASGVADVALTNRTVHDLRRGLRQHFGGGFTLQAPDEDAPDRRVAVFFDPPVGQPNPDEV
Ga0209341_100227773	3300025325	Soil	VPEPRHSRQPAHSYGARQNWHVEDDGSVRIHWQAEGFVAIHVYARFWPSSEVARRASGVADVALTNRTVHDLRRGLRQHFGGGFTLQAPDEDAPDRRVAVFFDPPVGQPNPDEV
Ga0209342_102105452	3300025326	Soil	VRIAWQADGFEAIHVYARFWPPVEVARRARGVADVALVNRTVHDLRRGLRQLFGGTFSLQAPDEDAPDRRVAVFFDPPVGAPNPDEI
Ga0209751_110462412	3300025327	Soil	PSFSYRWRQNWGVQDDGSVRIAWQADGFEAIHVYARFWPPVEIARRARDVADVALVNRTVHDLRRGLRQLFGGTFSLQAPDEDAPDRRVAVFFDPPVGAPNPDEV
Ga0208080_10478812	3300025553	Arctic Peat Soil	MEADGSVRIAWIADGFEAIHVYARFWPSTEVSRRAQEVADVALTNRTVHDLRRGLRALFGGGFQLQAPAEDAPDRRVAVFFDPPRGTPNPDPY
Ga0209638_100006458	3300025725	Arctic Peat Soil	MESDGSVRIAWAADGYEAIHVYARFWPSPVVAERAQDVADVALTNRTVHDLRVGLRDRFGAAFQLQAPDEDAPDRRVAIFFDPPRGKPNPDPW
Ga0210097_10762012	3300025801	Natural And Restored Wetlands	VESDGSVRIAWLADGFEAIHVYARFRPSTEVAERALVVADVALTNRTVHDLRRGLRARFGGAFQLQAPDEDAPDRRIAIFFDPPAGNPNPDD
Ga0209540_100856121	3300025888	Arctic Peat Soil	GYEAIHVYARFWPSPVVAERAQDVADVALTNRTVHDLRVGLRDRFGAAFQLQAPDEDAPDRRVAIFFDPPRGKPNPDPW
Ga0209540_101201052	3300025888	Arctic Peat Soil	MEADGSVRIAWNADGFEAIHVYARFWPSTEVSRRAQEVADVALTNRTVHDLRRGLRALFGGGFQLQAPDEDAPDRRVAVFFDPPRGTPNPDPY
Ga0207707_113434952	3300025912	Corn Rhizosphere	MQEDDSVRIAWLADGFVAIHVYARFWPSTEVAQRAAGVADIALTNRTLHDLRRGLRQRFGSGFTLQAPDEDAPDRRVAVFFDPPVGPPNPDET
Ga0256866_11329402	3300027650	Soil	VEPDGSIRIHWQAEGYEAIHVYGRFWPAEEVRRRAGAVADVALTNRTVHDLRRGLRQYFGGSFDLRAPDETASDRRVVISFHPPPGQPNPDI
Ga0209974_100028178	3300027876	Arabidopsis Thaliana Rhizosphere	MQEDDSVRIAWLADGFVAIHVYARFWPTAEVAQRAAGVADIALTNRTLHDLRRGLRQRFGSGFTLQAPDEDAPDRRVAVFFDPPVGPPNPDET
Ga0209486_109880861	3300027886	Agricultural Soil	MDNWPVEPDGSIRIHWQAEGYEAIHVYGHFWPAEEVRRRAGAVADVALTNRTVHDLRRGLRQHFGGSFDLRAPDEAAPDRRVVVSFHPPPGRPNPDPGV
Ga0265326_102265672	3300028558	Rhizosphere	MESDGSVRIAWNADGYEAIHVYARFWPSGVVAERALGVADVALTNRTVHDLRVGLRDLFGAAFQLQAPDEDAPDRRVAIFFDPPRGKPNPDPW
Ga0265336_102582102	3300028666	Rhizosphere	MENDGSVRIAWNADGYEAIHVYARFWPPRVVAERALDVADVALTNRTVHDLRRGLRARFGGEFQLQAPDEDAPDRR
Ga0311334_117222971	3300029987	Fen	WPGQNWGVESDGSVRIAWNADGFEAIHVYARFWPSTVVAERAQAVADVALTNRTVHDLRRGLRAHFGGGFTLQAPDEDAPDSRVAIFFDPPRGQPRPDDY
Ga0311336_114352161	3300029990	Fen	RAHWYWPRQNWGVESDGSVRIAWNADGFEAIHVYARFWPSTVVAERAQAVADVALTNRTVHDLRRGLRAHFGGGFTLQAPDEDAPDSRVAIFFDPPRGQPRPDPY
Ga0299907_100369696	3300030006	Soil	MGQRARWYWPRQNVGMQEDGSVRIAWIADGFEAIHVYARFWPPGEVHRRARGVADVALTNRTLHDLRRGLRQHFGGGYTLQAPDEDAPDRRVAVFFDPPIGPPNPDDDWAA
Ga0299907_109367462	3300030006	Soil	MIATPWASPEGRSCQTWSMSLQSDGSLRIAWLADGCEAIHVQAHFWPPDHLQLLAQGVADVALTNRTLHDLRRGLRQRFDGSFDLEAPDQDAPDRRVLITFHPPRGRP
Ga0302273_11497682	3300030048	Bog	IAWNADGFEAIHVYARFWPSTVVAERAQAVADVALTNRTVHDLRRGLRAHFGGGFTLQAPDEDAPDSRVAIFFDPPRGQPRPDDY
Ga0299906_107463401	3300030606	Soil	HVYARFWPPGEVQRRAQGVADVALINRTLHDLRRGLRQRFGGGFTLQAPDEDAPDRRVAIFFDPPVGEPNPDDDWAA
Ga0299906_107831261	3300030606	Soil	MEKDGSVRIAWLADGFEAIHVYARFWPPGEVQRRAQGVADVALTNRTLHDLRRGLRQLFGGGFALQAPDEDAPDRRVAIFFDPPVGLPNPDDDWAA
Ga0299915_105683812	3300030613	Soil	MEQDGSVRIAWSAEGFDAIHVYARFWPPEEVATRARGVADVALTNRTVHDLRRGLRQHFGGTFQMQAPDEDAPDRRVAVFFDPPVGAPNPDVA
Ga0268386_100437694	3300030619	Soil	VELDGSVRIAWNADSFEAIHVLARFWPDDHLQRLARGVADVALTNRTLHDLRRGLRGRFGGTFDLQAPDEDASDRRVLITFHPPPGEPQPED
Ga0268386_101225791	3300030619	Soil	MGQRARWYWPRQNVGMQEDGSVRIAWIADGFEAIHVYARFWPPGEVHRRARGVADVALTNRTLHDLRRGLRQHFGGGYTLQAPDEDAPDRRVAVFFDPPIGPPNP
Ga0302046_102836833	3300030620	Soil	VEKDGSVRIAWLADGYEAIHVYARFWPPGEVQRRAQGVADVALINRTLHDLRRGLRQRFGGGFTLQAPDEDAPDRRVAIFFDPPVGEPNPDDDWAA
Ga0299913_102520843	3300031229	Soil	MIGKALASLPPALASCQTSRMSLQSDGSLRIAWLTDGYEAIHVQARFWPPDHLHRLAQDVADVALTNRTLHDLRRGLRQRFEGSFDMEAPDQDAPDRRVLISFHPPRGRPNPDE
Ga0299913_103824042	3300031229	Soil	VEPDGSIRIHWQAEGYEAIHVYGQFWPADEVRRRATAVADVALTNRTVHDLRRGLRLHFGGSFDMRAPDQAAPDRRVAVFFHPPPGKPNPDPYF
Ga0299913_112642871	3300031229	Soil	MSLQSDGSLRIAWLADGYEAIHVQAHFWPPDHLQRLAQGVADVALTNRTLHDLRRGLRQRFDGSFDLEAPDQDAPDRRVLINFHPPRGRPNPDE
Ga0299913_115421991	3300031229	Soil	VEQDGSVRIAWHAEGFDAIHVYARFWPADEVQRRAQGVADVALTNRTVPDLRSGLRAAFGGSFSLQAPDEDAPDRRVAVFFDPPAGEPNPDE
Ga0302323_1014152822	3300031232	Fen	WYWPGQNWGVVSDGSVRIGWIADGFEAIHVYARFWPSTVVAERAQAVADVALTNRTVHDLRRGLRAHFGGGFTLQAPDEDAPDSRVAIFFDPPRGQPRPDDY
Ga0265330_104343371	3300031235	Rhizosphere	YRPGQNCRMESDGSVRIAWNADGYEAIHVYARFWPSGVVAERALGVADVALTNRTVHDLRVGLRDLFGAAFQLQAPDEDAPDRRVAIFFDPPRGKPNPDPW
Ga0265325_100094192	3300031241	Rhizosphere	MESDGSVRIAWNADGYEAIHVYARFWPSGVVAERALGVADVALTNRTVHDLRVGLRDLFGAGFQLQAPDEDAPDRRVAIFFDPPRGKPNPDPW
Ga0265340_100216711	3300031247	Rhizosphere	RPGQNCRMERDGSVRIAWNADGYEAIHVYARFWPSGVVAERALGVADVALTNRTVHDLRVGLRDLFGAAFQLQAPDEDAPDRRVAIFFDPPRGKPNPDPW
Ga0307420_10423482	3300031281	Salt Marsh	MEPDGSVRIAWLADGYEAIHVYARFWPSSEVQQRAQGVADVALTNRTVHDLRRSLRQRFDGTFTMQAPDEDAPDRRVAIFFDPPRGEPNPDVE
Ga0265313_101890871	3300031595	Rhizosphere	GSVRIAWNADGYEAIHVYARFWPSGVVAERALGVADVALTNRTVHDLRVGLRDLFGAAFQLQAPDEDAPDRRVAIFFDPPRGKPNPDPW
Ga0311351_104721031	3300031722	Fen	PRQNWGVESDGSVRIAWNADGFEAIHVYARFWPSTVVAERAQAVADVALTNRTVHDLRRGLRAHFGGGFTLQAPDEDAPDSRVAIFFDPPRGQPRPDDY
Ga0302322_1004027993	3300031902	Fen	RALWYWPGQNWGVESDGSVRIAWNAEGFEAIHVYARFWPSTVVAERAQAVADVALTNRTVHDLRRGLRAHFGGGFTLQAPDEDAPDSRVAIFFDPPRGQPRPDDY
Ga0310900_119152552	3300031908	Soil	AEGFEAIHVYARFWPSWVVSERAQGVADVALTNRTIHDLRRGLRAMFGGSFQLQAPDEDAPDRRVAVFFDPPMGDPNPDV
Ga0214473_100090376	3300031949	Soil	VEDDGSVRIYWQAEGFVAIHVYARFWPSSEVALRAAGVADVALTNRTVHDLRRGLRQHFGGGFTLHAPDEDAPDRRVAVFFDPPVGQPNPDEG
Ga0214473_103149002	3300031949	Soil	VEDDGSVRIAWQAEGFVAIHVYARFWPPSEVARRASGVADVALTNRTVHDLRRGLRNHFGAGFTLQAPDEDAPDRRVAVFFDPPVGEPNPDEG
Ga0310902_105346132	3300032012	Soil	VENDGSIRIAWNAEGFEAIHVYARFWPNDELARRAGVVADIALTNRTVHDLRRGLRERFAAEFELQSPDEDAPDRRVAIFFAPP
Ga0310890_110246442	3300032075	Soil	VENDGSIRIAWNAEGFEAIHVYARFWPNDELARRAGVVADIALTNRTVHDLRRGLRERFAAEFELQSPDEDAPDRRVAIFFA
Ga0315268_126700722	3300032173	Sediment	VEDDGSVRIAWQAEGFVAIHVYARFWPSTEVARRASGVADVALTNRTVHDLRRGLRQQFGSGFTLQAPDEDAPDRRVAVFFDPPVGEPNPD
Ga0335085_119136601	3300032770	Soil	AARHFGHAGTTRQCGQNWAMESDGSVRIAWNADGYEAIHVYARFWPSSVVAERAQAVADVALTNRTVHDLRRGLRARFAGEFQLQAPDEDAPDRRVAIFFDPPRGEPNPDAD
Ga0335082_100193733	3300032782	Soil	MESDGSVRIAWNADGYEAIHVYARFWPSTVVAERAQGVADVALTNRTVHDLRLGLRARFGSGFQLQAPDEDAPDRRVAIFFDPPRGEPNPDLG
Ga0335084_118973202	3300033004	Soil	GFEAIHVYARFWPSAEVARRAAGVADVALTNRTVHDLRRGLRLRFGGTFSLQAPDEDAPDRRVAVFFDPPVGPPNPEPD
Ga0334722_110250261	3300033233	Sediment	VRIAWQADGFVAIHVYARFWPSDEVARRASGVADVALTNRTVHDLRRGLRQLFGGTFSLQAPDEDAPDRRVAVFFDPPVGPPNPEES
Ga0214471_101990452	3300033417	Soil	MQDDDSVRIAWAAEGFEAIHVYARFWPLEEIRLRAQGVADIALVNRNLHDLRRGLRQQFGGTFSLQAPDEDAPDRRVAVFFDPPTGPPNPNED
Ga0326726_103106382	3300033433	Peat Soil	VEDDGSVRIAWQAEGFVAIHVYARFWPSTEVARRASGVADVALTNRTVHDLRRGLRQHFGSGFTMQAPDEDAPDRRVAVFFDPPVGEPNPDEG
Ga0326726_105137802	3300033433	Peat Soil	VEDDGSVRIHWQAEGFVAIHVYARFWPSTEVARRASSVADVALTNRTVHDLRRGLRQHFGGGFTLQAPDEDAPDRRVAVFFDP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060656

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign