Metagenome / Metatranscriptome Family F060650

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060650
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	49 residues
Representative Sequence	MPGSVTSVFSEAEDFEAALREEGCLSLLVTGRGAFRARLTQIALHRLRL
Number of Associated Samples	108
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.23 %
% of genes near scaffold ends (potentially truncated)	87.12 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.727 % of family members)
Environment Ontology (ENVO)	Unclassified (52.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.242 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.99% β-sheet: 15.58% Coil/Unstructured: 71.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13416	SBP_bac_8	6.82
PF01914	MarC	6.06
PF04403	PqiA	3.03
PF14559	TPR_19	3.03
PF00211	Guanylate_cyc	2.27
PF11994	DUF3489	2.27
PF00924	MS_channel	2.27
PF01522	Polysacc_deac_1	1.52
PF03886	ABC_trans_aux	1.52
PF05977	MFS_3	1.52
PF13610	DDE_Tnp_IS240	1.52
PF12833	HTH_18	0.76
PF00126	HTH_1	0.76
PF07683	CobW_C	0.76
PF07883	Cupin_2	0.76
PF13683	rve_3	0.76
PF00691	OmpA	0.76
PF04828	GFA	0.76
PF07589	PEP-CTERM	0.76
PF00589	Phage_integrase	0.76
PF03992	ABM	0.76
PF04191	PEMT	0.76
PF00266	Aminotran_5	0.76
PF13333	rve_2	0.76
PF04773	FecR	0.76
PF10754	DUF2569	0.76
PF08281	Sigma70_r4_2	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	6.06
COG2995	Intermembrane transporter PqiABC subunit PqiA	Cell wall/membrane/envelope biogenesis [M]	3.03
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	2.27
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.27
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	2.27
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	1.52
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.52
COG0523	Zinc metallochaperone YeiR/ZagA and related GTPases, G3E family	General function prediction only [R]	0.76
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.82 %
Unclassified	root	N/A	43.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.82 %
Unclassified	root	N/A	43.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.82 %
Unclassified	root	N/A	43.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.52 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.52 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.12 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.09 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.27 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.27 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.76 %
Amorphaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae	0.76 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.76 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.76 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.27 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.52 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.76 %
Acuticoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus	0.76 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.76 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.76 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.76 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.76 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.27 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	1.52 %
Acuticoccus sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus sediminis	0.76 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.76 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.76 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.76 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.76 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.76 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	2.27 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	1.52 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.76 %
Sinorhizobium fredii group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group	0.76 %
Acuticoccus sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus sediminis	0.76 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.76 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.76 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.76 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	2.27 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	1.52 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	0.76 %
Sinorhizobium fredii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	0.76 %
Acuticoccus sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus sediminis	0.76 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.76 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.76 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.76 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig114655	Not Available	519	Open in IMG/M
2199352024\|deeps__Contig_71764	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1759	Open in IMG/M
3300001545\|JGI12630J15595_10118688	Not Available	522	Open in IMG/M
3300002245\|JGIcombinedJ26739_101819822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	510	Open in IMG/M
3300003368\|JGI26340J50214_10170340	Not Available	542	Open in IMG/M
3300004082\|Ga0062384_100727946	Not Available	686	Open in IMG/M
3300004092\|Ga0062389_101729666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	806	Open in IMG/M
3300004152\|Ga0062386_101435060	Not Available	575	Open in IMG/M
3300004635\|Ga0062388_101166192	Not Available	760	Open in IMG/M
3300005355\|Ga0070671_100442523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1114	Open in IMG/M
3300005552\|Ga0066701_10954287	Not Available	507	Open in IMG/M
3300005764\|Ga0066903_102481508	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300005764\|Ga0066903_108962218	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300006904\|Ga0075424_101685165	Not Available	671	Open in IMG/M
3300009137\|Ga0066709_103154285	Not Available	602	Open in IMG/M
3300010046\|Ga0126384_12073964	Not Available	545	Open in IMG/M
3300010048\|Ga0126373_11381850	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300010343\|Ga0074044_10045734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3024	Open in IMG/M
3300010359\|Ga0126376_12486371	Not Available	565	Open in IMG/M
3300010360\|Ga0126372_11146460	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300010366\|Ga0126379_13433885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300010376\|Ga0126381_101679306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	917	Open in IMG/M
3300012202\|Ga0137363_10139945	All Organisms → cellular organisms → Bacteria → Proteobacteria	1890	Open in IMG/M
3300016270\|Ga0182036_10313819	Not Available	1197	Open in IMG/M
3300016294\|Ga0182041_12169800	Not Available	519	Open in IMG/M
3300016371\|Ga0182034_10295441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1296	Open in IMG/M
3300016371\|Ga0182034_10833911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	790	Open in IMG/M
3300016371\|Ga0182034_11324194	Not Available	628	Open in IMG/M
3300016422\|Ga0182039_11379746	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300016445\|Ga0182038_10279389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1356	Open in IMG/M
3300018058\|Ga0187766_10898272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300020580\|Ga0210403_10149186	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300020581\|Ga0210399_11211010	Not Available	599	Open in IMG/M
3300020583\|Ga0210401_10304963	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300021181\|Ga0210388_11393401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	589	Open in IMG/M
3300021361\|Ga0213872_10192325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	878	Open in IMG/M
3300021374\|Ga0213881_10401480	Not Available	617	Open in IMG/M
3300021402\|Ga0210385_10516330	Not Available	907	Open in IMG/M
3300021402\|Ga0210385_11300852	Not Available	557	Open in IMG/M
3300021404\|Ga0210389_10272600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1325	Open in IMG/M
3300021407\|Ga0210383_11747189	Not Available	508	Open in IMG/M
3300021433\|Ga0210391_10381952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1105	Open in IMG/M
3300021441\|Ga0213871_10236341	Not Available	578	Open in IMG/M
3300021479\|Ga0210410_11128206	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300021560\|Ga0126371_10280667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1788	Open in IMG/M
3300021560\|Ga0126371_10591362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1259	Open in IMG/M
3300021560\|Ga0126371_11925455	Not Available	710	Open in IMG/M
3300025931\|Ga0207644_11340222	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300026489\|Ga0257160_1033277	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300027065\|Ga0208489_1007363	Not Available	649	Open in IMG/M
3300027069\|Ga0208859_1041774	Not Available	535	Open in IMG/M
3300027684\|Ga0209626_1186715	Not Available	550	Open in IMG/M
3300027795\|Ga0209139_10046559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1526	Open in IMG/M
3300027795\|Ga0209139_10235531	Not Available	647	Open in IMG/M
3300027824\|Ga0209040_10172183	Not Available	1148	Open in IMG/M
3300027824\|Ga0209040_10240786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	913	Open in IMG/M
3300027824\|Ga0209040_10285767	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300027829\|Ga0209773_10193382	Not Available	850	Open in IMG/M
3300027903\|Ga0209488_10776255	Not Available	681	Open in IMG/M
3300029636\|Ga0222749_10641405	Not Available	581	Open in IMG/M
3300030969\|Ga0075394_11972071	Not Available	597	Open in IMG/M
3300031057\|Ga0170834_112079357	Not Available	898	Open in IMG/M
3300031231\|Ga0170824_110956283	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300031231\|Ga0170824_125815513	Not Available	861	Open in IMG/M
3300031446\|Ga0170820_12747928	Not Available	550	Open in IMG/M
3300031543\|Ga0318516_10047220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	2334	Open in IMG/M
3300031544\|Ga0318534_10228418	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300031546\|Ga0318538_10189489	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300031561\|Ga0318528_10035717	All Organisms → cellular organisms → Bacteria → Proteobacteria	2465	Open in IMG/M
3300031573\|Ga0310915_10335587	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300031668\|Ga0318542_10750187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300031679\|Ga0318561_10037595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2373	Open in IMG/M
3300031680\|Ga0318574_10136458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1385	Open in IMG/M
3300031682\|Ga0318560_10068031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1792	Open in IMG/M
3300031713\|Ga0318496_10116419	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300031719\|Ga0306917_11015813	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031719\|Ga0306917_11589246	Not Available	502	Open in IMG/M
3300031723\|Ga0318493_10451418	Not Available	707	Open in IMG/M
3300031747\|Ga0318502_10661458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300031751\|Ga0318494_10185649	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300031764\|Ga0318535_10295660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	725	Open in IMG/M
3300031770\|Ga0318521_10025899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2809	Open in IMG/M
3300031771\|Ga0318546_11012715	Not Available	584	Open in IMG/M
3300031771\|Ga0318546_11182148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300031781\|Ga0318547_10458734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300031793\|Ga0318548_10194650	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300031793\|Ga0318548_10344650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300031793\|Ga0318548_10525542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300031795\|Ga0318557_10313787	Not Available	720	Open in IMG/M
3300031805\|Ga0318497_10611046	Not Available	611	Open in IMG/M
3300031821\|Ga0318567_10722752	Not Available	565	Open in IMG/M
3300031879\|Ga0306919_10643685	Not Available	817	Open in IMG/M
3300031893\|Ga0318536_10044743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2120	Open in IMG/M
3300031897\|Ga0318520_10969251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300031912\|Ga0306921_10355468	All Organisms → cellular organisms → Bacteria → Proteobacteria	1712	Open in IMG/M
3300031912\|Ga0306921_10516615	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300031941\|Ga0310912_11128211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300031945\|Ga0310913_11059481	Not Available	567	Open in IMG/M
3300031947\|Ga0310909_10799130	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300031954\|Ga0306926_11409443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300031981\|Ga0318531_10493854	Not Available	554	Open in IMG/M
3300032001\|Ga0306922_10197802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2157	Open in IMG/M
3300032001\|Ga0306922_10884438	Not Available	929	Open in IMG/M
3300032025\|Ga0318507_10044636	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300032035\|Ga0310911_10345733	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300032041\|Ga0318549_10533901	Not Available	527	Open in IMG/M
3300032052\|Ga0318506_10455591	Not Available	567	Open in IMG/M
3300032055\|Ga0318575_10085463	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300032059\|Ga0318533_11292027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	533	Open in IMG/M
3300032060\|Ga0318505_10345258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300032064\|Ga0318510_10007712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	3007	Open in IMG/M
3300032067\|Ga0318524_10649475	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300032068\|Ga0318553_10104616	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300032076\|Ga0306924_10565392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1290	Open in IMG/M
3300032076\|Ga0306924_11133456	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300032076\|Ga0306924_11201640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus sediminis	820	Open in IMG/M
3300032094\|Ga0318540_10191820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	984	Open in IMG/M
3300032094\|Ga0318540_10400249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	663	Open in IMG/M
3300032180\|Ga0307471_103944190	Not Available	524	Open in IMG/M
3300032892\|Ga0335081_11354184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300033158\|Ga0335077_11451468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	659	Open in IMG/M
3300033290\|Ga0318519_10328210	Not Available	900	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.45%
Host-Associated	Host-Associated	3.79%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.12%
Aquatic	Environmental → Aquatic	8.33%
Plants	Host-Associated → Plants	3.79%
Modeled	Engineered → Modeled	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.36%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.79%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.76%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	5.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.52%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.76%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.76%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.76%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027065	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF006 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0621.00006940	2166559005	Simulated	MPSSVTSVFSEAKDFAVAMREEGCLALLVTGSGQFRARLTQVALLGLRLSR
deeps_01149850	2199352024	Soil	MPSSVTSVFSEAKDFAVAMREEGCLALLVTGSGQFRARLTQVALLA
JGI12630J15595_101186882	3300001545	Forest Soil	MPGSVTSVFSEPDDFEAALREDGVLGMLITGRGRFRARLTQITLHR
JGIcombinedJ26739_1018198221	3300002245	Forest Soil	VPGSVTSVFSEANDFAAALRAEGCFGLLVTGPGAFRARLTQVVLHQLRLSAGEEHPPRI
JGI26340J50214_101703402	3300003368	Bog Forest Soil	MPGSVTSVFSEPGDFEAALREEGGLGLLITGRGRFRARLTQIALD
Ga0062384_1007279462	3300004082	Bog Forest Soil	MPGSVTSVFSEAEDFEAALREEGCLSLLVTGRGAFRARLTQIALHRLRL
Ga0062389_1017296661	3300004092	Bog Forest Soil	MPGSVTSVFSEAEDFEAALHKEGCLGLLVTGPGAFRARLTQIALHRLRLS
Ga0062386_1014350602	3300004152	Bog Forest Soil	MPGSVTSVFSEAEDFEAALREEGYLGLLVTGQGAFRARLTQI
Ga0062388_1011661921	3300004635	Bog Forest Soil	MPGSVASVFSEAEDFETALCREGCLGLLVTGRGAFRARLTQLALHRLNLAAGEE
Ga0070671_1004425233	3300005355	Switchgrass Rhizosphere	MPGCVTSTFSEPDDFAAALRQEGYLKLLITGRGQFQAQLMQIVLHRQRLSTAEEQLPRELPPEEWTPG*
Ga0066701_109542871	3300005552	Soil	VPRTFTSVFSEPDDFQAAVNEEGVVRFLVTGRGQFRARLTQIVLHRLRLSAG
Ga0066903_1024815081	3300005764	Tropical Forest Soil	MPGSSTSVFCEAEDFEAALREEGRLHLLVTGQGAFRARLTQI
Ga0066903_1089622182	3300005764	Tropical Forest Soil	MPGSIISAFSEAADFEAALREGGGIGLLVTGPGAFRARLTRITLLRLRLAAAEEHLPRILLV
Ga0075424_1016851652	3300006904	Populus Rhizosphere	MPGSVTSVFSEADEFEAALLGEGGLGLLVTGSGAFRARLTQ
Ga0066709_1031542851	3300009137	Grasslands Soil	VPRTFTSVFSEPDDFQAAVSEEGVVRFLVTGRGQFRARLTQIVLHRLRLSAGEE
Ga0126384_120739641	3300010046	Tropical Forest Soil	MPGSVTSVFSEAEDYEVALREEGCCGLLVTGSGEFSARLTQVALHRLRLSAAEEIWPG*
Ga0126373_113818501	3300010048	Tropical Forest Soil	LPGSVTSVFGGPDDFYAALPEDGVLSLLVTGNGPYRAR
Ga0126373_121012423	3300010048	Tropical Forest Soil	MPVSITSMFSDAEDFEAALGEEGCLNLLVTGVGLFQAQLTEIALH
Ga0074044_100457347	3300010343	Bog Forest Soil	MPGSVTSVFSEPEDFQNALREDGMLGTLITGRGRFQARLTQIMLHGLRLSAAEEHLSRIAFVTV
Ga0126376_124863711	3300010359	Tropical Forest Soil	MPGSATSVFSEAEDFEAALRGGGCLGLLITGLGKFRAR
Ga0126372_111464601	3300010360	Tropical Forest Soil	MPGSVTSVFGEAENFEAALREEGFTSLLVTEAGVFRSRLTQITLDRLRL
Ga0126379_134338851	3300010366	Tropical Forest Soil	MPGSVTSVFSEAQDFEAALRAEGGAGPLVTGRGAFRARLTQITLDRLRL
Ga0126381_1016793063	3300010376	Tropical Forest Soil	MPGNVISAFSEAADFEAAFRERGGVGLLVTGPGAFRARLTRIALLQL*
Ga0137363_101399451	3300012202	Vadose Zone Soil	MPSSVTSVFSEAEDFAAALRAEGCLSLLVTGAGQFRARLTQVALLGLRLSATDEH
Ga0182036_103138193	3300016270	Soil	MPGSVTSVFSELEDFAAALHEEGCLDLLVTGRGEFRARLTQV
Ga0182041_121698001	3300016294	Soil	LPGSVTSVFGEPDDFHAALRAAGVLNLLVTGNGPFRARLTQVALNHMRL
Ga0182034_102954413	3300016371	Soil	MPGSVTSVFSEPDDFQATLHEDGVFGMLVTGGSPFRARLTQIT
Ga0182034_108339111	3300016371	Soil	MPGSVTSVFSEAEDFAAALREEGFLSLLVTGNGEFRARLTRVSLHSLRLSAAEEHLSRT
Ga0182034_113241942	3300016371	Soil	MPGSVTSVFSELEDFAAALHEEGCLDLLVTGRGEFRARLTQVALHRLRLGAAEERLP
Ga0182039_113797461	3300016422	Soil	MPGSVTSAFSEAADFEAALREGGCLGLLLTGPGAFRARLTRIALLQLQLSAAEEHLPR
Ga0182038_102793894	3300016445	Soil	MPGSATSVYSEAEDFEAAIRAEGCLGLLVTGPGQFRARLTQVGLHRL
Ga0187766_108982722	3300018058	Tropical Peatland	MPGSATSVFSEAEDFEAALRAEGCLGLLVTGRGQFRARLTQVSLHRLRLSATDEQL
Ga0210403_101491864	3300020580	Soil	MPSSVTWVFSEAEDFAAALRAEGCLGLLVTGAGQFRARLTQVALHRLRLSAADENLPRIARVA
Ga0210399_112110101	3300020581	Soil	MPGSVTSVFGEPGDFEAALREEGCLGLLITGRGQFRARLTQVKLHRLRLSAAEEQLSR
Ga0210401_103049632	3300020583	Soil	MPGSVTSVFGEPEDFQAALREEGVLGMLITGRGRFRARLTQITLHRLRLSAAEEHLPWIVFVAV
Ga0210388_113934012	3300021181	Soil	MPGSVTSVFSEPGDFEAALREEGGLGLLITGRGQFRARLT
Ga0213872_101923252	3300021361	Rhizosphere	MPGSATSVFSDAEEFEAALRTEGCLGLLITGRGQFRARLTQVSLH
Ga0213881_104014801	3300021374	Exposed Rock	MPGSVTSAFSEAADFEAALREGGCLGLLVTGPGSFRARLTRIALLQLRLSAAEEHLPRI
Ga0210385_105163301	3300021402	Soil	MSGSVTSVFSEPDEFEGALRRDGYLRLLITGRGQFRARLTQIALHRLRLSGGDEQLSRIAVVT
Ga0210385_113008521	3300021402	Soil	MPGSVTSVFSEPGDFEAALRDEGGLGLLITGRGQFLARLTQVKLHRMRLSAAEEQLSRI
Ga0210389_102726002	3300021404	Soil	MRSSTTGVFREQDDFEAALREEGCVSLLVTDPGSFRARFTRIALHQLRL
Ga0210383_117471892	3300021407	Soil	MPDSVTSAFSDPEDFAAAFRTEGCVGLLITGRGQFQA
Ga0210391_103819521	3300021433	Soil	MPSSMTGAFDERADFETALRAGCRGLVVTGRGQFRAQLTVVTLHRLRLSAVEEQLSRIAF
Ga0213871_102363411	3300021441	Rhizosphere	MPGSVTSVFSEPDELQAALRAEGVINLLVPSPGEFRARLTQARLHRLRLSCGDEFRSRVA
Ga0210410_111282061	3300021479	Soil	MPGSVTSVFSEPGDFEAALREEGGLGLLITGRGQFRA
Ga0126371_102806671	3300021560	Tropical Forest Soil	MPGSVTSAFSEAEDFQAALRAEGCLCLLVTGAGPFKAQLTQIVLHHLRLLAGDEYLPRFALVA
Ga0126371_105913622	3300021560	Tropical Forest Soil	MPGSATSVYSEAEDFEAALRAQGCLGLLVTGPGQFRPRLTELGLHRLRLSARANVMAA
Ga0126371_119254551	3300021560	Tropical Forest Soil	MPGTATSVFSEAEGFEAALRAEGCLGLLVTGRGRFRARLTQVSLHRLRLSATDETLARIA
Ga0207644_113402222	3300025931	Switchgrass Rhizosphere	MPGCVTSTFSEPDDFAAALRQEGYLKLLITGRGQFQAQLMQIVLHRQRLSTAEEQLPRELPPEEWTPG
Ga0257160_10332771	3300026489	Soil	MPGSVTSVFSEPGDFEAALREEGGLGLLITGRGQF
Ga0208489_10073631	3300027065	Forest Soil	MPGSVTSVFSEPGDFEAALREEGGLGLLVTGRGQFRARLTQVKLHRMRLSAAEEQLSRIAFV
Ga0208859_10417742	3300027069	Forest Soil	MPGSVTSVFSEPSDFEAALREEGGLGLLITGRGQFLA
Ga0209626_11867151	3300027684	Forest Soil	MPGSVTSVFSEPGDFEAALREEGGLGLLITGRGQFLARLTQVKLHRMRLSAAEEQLSRIA
Ga0209139_100465593	3300027795	Bog Forest Soil	MPGSVASMFSEAEDFETALRQEGCLGLLVTGRGAFRARLTQVALHRLNLAAGEEQLARV
Ga0209139_102355311	3300027795	Bog Forest Soil	MPGSVTSVFSEAEDFEAALREEGCLSLLVTGRGAFRARLTQIA
Ga0209040_101721832	3300027824	Bog Forest Soil	MPGSVTSVFSEPGDFEAALREEGGLGLLITGRGRFRARLTQIALDHLRLSA
Ga0209040_102407861	3300027824	Bog Forest Soil	MPGSVTSVFSEPCDFEAALREEGGLGLLITGRGRFRARLTQIALDHLRLSA
Ga0209040_102857671	3300027824	Bog Forest Soil	MPGSVTSVFSEADEFEAALRKEGCLGLLIIGRGQFR
Ga0209773_101933821	3300027829	Bog Forest Soil	MPGSVTSMFSEPADFEAALRAEGGLGLLVTGRGEFRARLTQVALHRLRLSAAEEQL
Ga0209488_107762551	3300027903	Vadose Zone Soil	MPSSVTSVFSEAEDFAAAVRKEGCLALLVTGAGQFRARL
Ga0222749_106414051	3300029636	Soil	MPGSVTSVFSEADEFGAALLEEGYLGLLVTGPGAFRARLTQVAL
Ga0075394_119720711	3300030969	Soil	MPSSVTSVFSEAEDFAVAMREEGCLALLVTGAGQFRARLTQVALLGLRLSATDEQLPRIA
Ga0170834_1120793572	3300031057	Forest Soil	MPGSVTAMFSEPADFEAALREGGCLSLLILGRGQFWAQVTRVTLH
Ga0170824_1109562832	3300031231	Forest Soil	MPSSVTSVFSEAKDFAVAMREEGCLALLVTGSGRF
Ga0170824_1258155131	3300031231	Forest Soil	MPGSVTSVFSEAEDFAAALREEGGLGVLVTGAGEFRARLTRVALHNLRLSAGDEQ
Ga0170820_127479282	3300031446	Forest Soil	MPGSVTSVFSEPGDFEAALRQDGVLSMLITGRGQFRARL
Ga0318516_100472201	3300031543	Soil	MPGSVTAVFGEAEDFAAALRAEGVLSLLVTGAGEFRAR
Ga0318516_103052571	3300031543	Soil	MPVSITSMFSDAEDFEAALCEEGCLSLLVTGVGSFQAQLTEIALHRLWLSATDEHL
Ga0318516_103738182	3300031543	Soil	MPASITSMFSDAEDFEAALGEEGCLSLLVTGVGPFQAQLTEIALHRLRLSAMD
Ga0318534_102284182	3300031544	Soil	MPGSVTAVFGEAEDFAAALRAEGVLSLLVTGAGEFRAQLTQIALNQLRL
Ga0318538_101894891	3300031546	Soil	MPGSVTSVSSEAKDFAAALRGEGWLGLLVTGAGEFRARLTQVTLHHLRLT
Ga0318528_100357171	3300031561	Soil	MPGSVTSVFSEAQDFEAALRAEGGAGLLVTGRAASR
Ga0310915_103355871	3300031573	Soil	MPRSITSVFSEAEDFAVAMREEGCLSLLVTGADQFRARLTQIALHSLRLSATDERMPRIA
Ga0318542_107501872	3300031668	Soil	MPESVTSVFSEVENFEIALREEGFVGLLVTGTGEFRARLT
Ga0318561_100375954	3300031679	Soil	MPRSITSVFSEAEDFAVAIREEGCLSLLVTGADQFRARLTQIALHSL
Ga0318574_101364582	3300031680	Soil	MPGSVTSVFSEPEDFEAALREDGVVSMLITGPGRFRARLTRVTLHRL
Ga0318574_105932332	3300031680	Soil	MPASITSMFSDAEDFEAALGEEGCLSLLVTGVGPFQAQLTEIALHRLR
Ga0318560_100680314	3300031682	Soil	MPGSTTSVFSEAGDFGAALRDEGCLGLLVTGAGEFRA
Ga0310686_1194521002	3300031708	Soil	MSVFSEPDDFEAALGEEGCLGLLITGRGLFQARLTQIALHRL
Ga0318496_101164191	3300031713	Soil	MPGSVTSVFSQAEDFAAALSEEGVLGLLVTGTGEFRARLT
Ga0306917_110158131	3300031719	Soil	MPGSVTSVFSDAEDFAAALREEGFLSLLVTGNGEFRARLTRVSLHSL
Ga0306917_115892462	3300031719	Soil	MPGSVTSAFNEAKDFQAVLRAGGCLCLLVTGAGQFKARLTQIVLHRLR
Ga0318493_104514181	3300031723	Soil	MPRSITSVFSEAEDFAVAMREEGCLALLVTGAGQFRARLTQIGLHSLR
Ga0318502_106614582	3300031747	Soil	MPGSVVSVFSEAEDFEVALRAEGALRLLVTGPGRFKARLTQVALH
Ga0318494_101856491	3300031751	Soil	MPGSVTSVFSEAKDFAAALRGEGWLGLLVTGAGEFRARLTQVTLHHL
Ga0318535_102956601	3300031764	Soil	MPGSVTSVFSEAKDFAAALRGEGWLGLLVTGAGEFRARLTQVTLH
Ga0318509_108489292	3300031768	Soil	MPVSITSMFSDAEDFEAALCEEGCLSLLVTGVGSFQAQLTEIALHRLWLSATD
Ga0318521_100258994	3300031770	Soil	MPRSITSVFSEAEDFAVAMREEGCLSLLVTGADQFRARLTQI
Ga0318546_110127152	3300031771	Soil	MPRSITSVFSEAEDFAVAMREEGCLSLLVTGAGQFRARLTQVALQ
Ga0318546_111821482	3300031771	Soil	MPGSVTSVFSEAEDFAAALRPEGFLSLAVIGGGEFRARLTRVTLHSLRLSTKRKQHC
Ga0318547_104587341	3300031781	Soil	MPGSVTSVFSEAEDFAAALREEGFLSLLVTGNGEFRARLTRVSLHSLR
Ga0318547_105130792	3300031781	Soil	MPVSITSMFSDAEDFEAALGEEGCVSLLVTGVGLFQAQLTE
Ga0318548_101946501	3300031793	Soil	MPGSVISVFSEAESFEAALREEGYTRLFVTESGEFRAC
Ga0318548_103446502	3300031793	Soil	MPESVTSVFSEVENFEIALREEGFVGLLVTGTGEFRARLTRVALH
Ga0318548_105255422	3300031793	Soil	MPGSVTSVFSEAEDFAAALREEGFLSLLVTGNGEFRARLT
Ga0318557_103137871	3300031795	Soil	MPGSATSVYSEAEDFEAAIRAEGCLGLLVTGPGQFRARLTQVGLHRLRLSAPD
Ga0318497_106110462	3300031805	Soil	MPASVTSVFSEPDDFQAALRADGVLSLLVTGPGRFRARLTQVTLQDLYL
Ga0318567_107227521	3300031821	Soil	MPGSVISVFSEAESFEAALREEGYTRLFVTESGEFRACLT
Ga0306919_106436851	3300031879	Soil	MPGSVTSVFGEPEEFEAALRADGVLSLLVTGHGRFRARLTQITLHRLRLS
Ga0306925_101484321	3300031890	Soil	MPVSITSMFSDAEDFEAALGEEGCVSLLVTGVGLFQAQLTEIALHRLWLSA
Ga0318536_100447434	3300031893	Soil	MPRSITSVFSEAEDFAVAMREEGCLSLLVTGAGQFRARLTQVAL
Ga0318520_109692511	3300031897	Soil	MPGSVTSVFSDAEDFAAALREEGFLSLLVTGNGEFRARLTRVSLHSLRLSAAE
Ga0306921_103554683	3300031912	Soil	VTMPRSITSVFSEAEDFAVAMREEGCLALLVTGAGQFRARLTQI
Ga0306921_105166151	3300031912	Soil	MPGSVTAVFGEAEDFAAALRAEGVLSLLVTGAGEFRAQLTQIALNQ
Ga0310912_111282111	3300031941	Soil	MPGSVTSVFSEAEDFAAALRPEGFLSLAVIGGGEFRARLTRVTLHSLRLSAAE
Ga0310916_102464833	3300031942	Soil	MPASITSMFSDAEDFEAALGEEGCLSLLVTGVGPFQAQLTEIALHRLRLSATDEHLPRIT
Ga0310913_110594812	3300031945	Soil	MPGSATSVYSEAEDFEAAIRAEGCLGLLVTGPGQFRARLTQVGLHRLRLSATDEPL
Ga0310909_107991302	3300031947	Soil	MPGSVTSVFSDAEDFAAALREEGFLSLLVTGNGEFRARLTRVSLHSLW
Ga0306926_114094431	3300031954	Soil	MPGSVTSGFSEAANFAAALRAEGVLSLLVTGSGEFRARLTQIDLHNLRLSTADEQLPRV
Ga0318531_104938542	3300031981	Soil	MPGSVTSVFSELEDFAAALHEEGCLDLLVTGRGEFRARLTQVALH
Ga0306922_101978021	3300032001	Soil	MPGSATSVYSEAEDFEAAIRAEGCLGLLVTGPGQFRARLTQVGLHRLRLSA
Ga0306922_108844382	3300032001	Soil	MPGSVTSVFGEPGDFEAALRGDGVLSLLVTAQGQFRARLTQ
Ga0318507_100446363	3300032025	Soil	MPVSITSMFSDAEDFEAALDEEGCLSLLVTGVGPFQA
Ga0310911_103457331	3300032035	Soil	MPRSITSVFSEAEDFAVAMREEGCLSLLVTGADQFRARLTQIALHSLRLSATDERMPRIAFV
Ga0318549_105339011	3300032041	Soil	MPGSVTSVFSEPEDFEAAPREDGVVSMLITGPGRFRARLT
Ga0318506_104555911	3300032052	Soil	MPGSVISVFSEAESFEAALREEGYTRLFVTESGEFRACLTQITLDRL
Ga0318575_100854632	3300032055	Soil	MPGSVTSVFSQAEDFAAALSEEGVLGLLVTGTGEFRARLTLVALHSLRLLAAEEHLS
Ga0318533_112920271	3300032059	Soil	MPGSIISAFSEAADFEAALREGGGIGLLVTGPGAFRARLTRITLLRLRLAAAEEH
Ga0318505_103452582	3300032060	Soil	MPGSVVSVFSEAEDFEVALRAEGALRLLVTGPGRFKARLTQVA
Ga0318510_100077121	3300032064	Soil	MPGSVTAVFGEAEDFAAALRAEGVLSLLVTGAGEFRAQLTQIALNQL
Ga0318514_100926982	3300032066	Soil	MPGSVTAVFGEAEDFAAALRAEGVLSLLVTGAGEFRAQLTQIALNQLRLSAAEERLPRIALV
Ga0318524_106494752	3300032067	Soil	MPGSVTSVFSDAEDFAAALREEGFLSLLVTGNGEFRA
Ga0318553_101046162	3300032068	Soil	MPGSVTSVFSQAEDFAAALSEEGVLGLLVTGTGEF
Ga0306924_105653923	3300032076	Soil	MPGSVTSVFSEAEDFAAALREEGFLSLLVTGNGEFRARLTRVS
Ga0306924_111334563	3300032076	Soil	MPRSITSVFSEAEDFAVAIREEGCLSLLVTGADQFRARLTQIALHSLRLSATDERMPRIA
Ga0306924_112016401	3300032076	Soil	MPESVTSVFSEVENFEIALREEGFVGLLGTGTGEFR
Ga0318540_101918202	3300032094	Soil	MPGTITSGFSEAEKFAAALRAEGVLSVLVTGTGEFRARLTQVALHQLRLSAAEEHLSR
Ga0318540_104002491	3300032094	Soil	MPASVASVFSNPEDLQAALNKDGVLSLLVTGSGRFRARLT
Ga0307471_1039441901	3300032180	Hardwood Forest Soil	MPGSVTSVFSEPGDFEAALREEGGLGLLITGRGQFRARLTQVKLHRLRLSAAEEQLSRI
Ga0335081_113541841	3300032892	Soil	MPGSVTSVFTEPEDFEAALRVQGCRVLVITEGGPFRARVTQIALRSLRVMAV
Ga0335077_114514682	3300033158	Soil	MPGSVTSTFSEPEDFEDALRKEGCRGLVITGRGRFRARLTQITLHRLRLSAAEEQLP
Ga0318519_103282102	3300033290	Soil	MPGSVSSVFGEPEDFAAALRADGVLSVLVTGHGPFRSRLTQVTLHGLC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060650

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences