Metagenome / Metatranscriptome Family F060626

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060626
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	102 residues
Representative Sequence	MAVALAVTPRTDAWAALNEQPANDAAAKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPQSSIPLRILRAPPCPPGKHHLS
Number of Associated Samples	99
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.48 %
% of genes near scaffold ends (potentially truncated)	34.09 %
% of genes from short scaffolds (< 2000 bps)	82.58 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.909 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.364 % of family members)
Environment Ontology (ENVO)	Unclassified (39.394 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.94% β-sheet: 11.72% Coil/Unstructured: 77.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00291	PALP	23.48
PF00293	NUDIX	12.12
PF14815	NUDIX_4	9.85
PF01960	ArgJ	7.58
PF01850	PIN	6.06
PF08241	Methyltransf_11	3.03
PF01370	Epimerase	3.03
PF01402	RHH_1	1.52
PF13145	Rotamase_2	1.52
PF13551	HTH_29	0.76
PF00795	CN_hydrolase	0.76
PF13185	GAF_2	0.76
PF00462	Glutaredoxin	0.76
PF00156	Pribosyltran	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1364	Glutamate N-acetyltransferase (ornithine transacetylase)	Amino acid transport and metabolism [E]	7.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.64 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.88 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	32.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	22.73 %
Unclassified	root	N/A	9.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.52 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	32.58 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	9.85 %
Unclassified	root	N/A	9.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.52 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	32.58 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	9.09 %
Unclassified	root	N/A	9.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.52 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100808758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	818	Open in IMG/M
3300004080\|Ga0062385_10154695	Not Available	1189	Open in IMG/M
3300004152\|Ga0062386_100715565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	822	Open in IMG/M
3300005172\|Ga0066683_10394542	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005332\|Ga0066388_103877534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300005332\|Ga0066388_106272433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300005471\|Ga0070698_100491947	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300005518\|Ga0070699_101243583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300005536\|Ga0070697_100331026	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300005559\|Ga0066700_11153391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300007258\|Ga0099793_10165915	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300009038\|Ga0099829_10394854	Not Available	1143	Open in IMG/M
3300009137\|Ga0066709_100439498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1821	Open in IMG/M
3300009143\|Ga0099792_10750369	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300010046\|Ga0126384_10457812	Not Available	1091	Open in IMG/M
3300010048\|Ga0126373_10559099	Not Available	1193	Open in IMG/M
3300010048\|Ga0126373_10761648	Not Available	1029	Open in IMG/M
3300010048\|Ga0126373_11541591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300010048\|Ga0126373_11662216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300010048\|Ga0126373_11711077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300010360\|Ga0126372_11028613	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300010361\|Ga0126378_10216290	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300010361\|Ga0126378_10466128	Not Available	1378	Open in IMG/M
3300010366\|Ga0126379_10045383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3577	Open in IMG/M
3300010366\|Ga0126379_10395424	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300010376\|Ga0126381_100008134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11714	Open in IMG/M
3300010376\|Ga0126381_100278395	Not Available	2281	Open in IMG/M
3300012096\|Ga0137389_10479344	Not Available	1066	Open in IMG/M
3300012169\|Ga0153990_1074152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	766	Open in IMG/M
3300012202\|Ga0137363_10180094	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300012202\|Ga0137363_10371519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1187	Open in IMG/M
3300012203\|Ga0137399_11774793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300012205\|Ga0137362_10097984	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300012211\|Ga0137377_11337703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300012361\|Ga0137360_10594592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	947	Open in IMG/M
3300012361\|Ga0137360_10636364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M
3300012362\|Ga0137361_10433973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1207	Open in IMG/M
3300012685\|Ga0137397_10275451	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300012923\|Ga0137359_10449870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1140	Open in IMG/M
3300012923\|Ga0137359_10717737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	870	Open in IMG/M
3300012923\|Ga0137359_11283653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300012925\|Ga0137419_10112845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1904	Open in IMG/M
3300012925\|Ga0137419_10541525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	929	Open in IMG/M
3300012929\|Ga0137404_10561869	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300012930\|Ga0137407_10217847	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300012930\|Ga0137407_10989376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	796	Open in IMG/M
3300012930\|Ga0137407_11622416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300012971\|Ga0126369_10695269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1094	Open in IMG/M
3300016270\|Ga0182036_11665117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300016270\|Ga0182036_11768282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300016357\|Ga0182032_11677454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300016387\|Ga0182040_10005737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6067	Open in IMG/M
3300016387\|Ga0182040_10078582	All Organisms → cellular organisms → Bacteria	2167	Open in IMG/M
3300016422\|Ga0182039_10927603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300016422\|Ga0182039_11163777	Not Available	696	Open in IMG/M
3300016445\|Ga0182038_10991573	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300017970\|Ga0187783_10236472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1337	Open in IMG/M
3300017970\|Ga0187783_10394264	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300018085\|Ga0187772_10686652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	733	Open in IMG/M
3300020579\|Ga0210407_10001066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	27110	Open in IMG/M
3300020579\|Ga0210407_10435955	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300020579\|Ga0210407_10823003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300020583\|Ga0210401_11293052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300021168\|Ga0210406_11062538	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300021170\|Ga0210400_10350258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1216	Open in IMG/M
3300021361\|Ga0213872_10202581	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300021361\|Ga0213872_10350485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300021420\|Ga0210394_11367778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300021432\|Ga0210384_10635248	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300021444\|Ga0213878_10123785	Not Available	1062	Open in IMG/M
3300021476\|Ga0187846_10014502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3727	Open in IMG/M
3300021560\|Ga0126371_10025815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5461	Open in IMG/M
3300021560\|Ga0126371_10169687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2258	Open in IMG/M
3300021560\|Ga0126371_12219934	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300022533\|Ga0242662_10097951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	832	Open in IMG/M
3300027651\|Ga0209217_1018663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2234	Open in IMG/M
3300027698\|Ga0209446_1027443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1423	Open in IMG/M
3300028047\|Ga0209526_10732917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300028047\|Ga0209526_10863281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300028536\|Ga0137415_10032487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5132	Open in IMG/M
3300031231\|Ga0170824_123915520	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031446\|Ga0170820_11286145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300031446\|Ga0170820_16074585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300031543\|Ga0318516_10022259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3255	Open in IMG/M
3300031543\|Ga0318516_10674608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300031545\|Ga0318541_10051533	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300031545\|Ga0318541_10101041	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300031545\|Ga0318541_10108133	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300031546\|Ga0318538_10275375	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300031549\|Ga0318571_10040672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1344	Open in IMG/M
3300031561\|Ga0318528_10407222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	730	Open in IMG/M
3300031573\|Ga0310915_11217880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300031668\|Ga0318542_10140873	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300031679\|Ga0318561_10005272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5226	Open in IMG/M
3300031720\|Ga0307469_10497395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1068	Open in IMG/M
3300031736\|Ga0318501_10018574	All Organisms → cellular organisms → Bacteria	2875	Open in IMG/M
3300031747\|Ga0318502_10023167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3041	Open in IMG/M
3300031748\|Ga0318492_10476185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	661	Open in IMG/M
3300031753\|Ga0307477_10010604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	6334	Open in IMG/M
3300031753\|Ga0307477_10118294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1846	Open in IMG/M
3300031763\|Ga0318537_10173335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300031765\|Ga0318554_10670318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300031768\|Ga0318509_10151855	All Organisms → cellular organisms → Bacteria → Proteobacteria	1277	Open in IMG/M
3300031768\|Ga0318509_10696953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300031779\|Ga0318566_10352615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300031793\|Ga0318548_10151789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1129	Open in IMG/M
3300031797\|Ga0318550_10111959	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300031798\|Ga0318523_10039560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2176	Open in IMG/M
3300031820\|Ga0307473_10873303	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031821\|Ga0318567_10040185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2375	Open in IMG/M
3300031890\|Ga0306925_11225683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300031896\|Ga0318551_10288134	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300031896\|Ga0318551_10852762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300031897\|Ga0318520_10623638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300031910\|Ga0306923_10002463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	16964	Open in IMG/M
3300031912\|Ga0306921_10834945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1050	Open in IMG/M
3300031941\|Ga0310912_10473826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	976	Open in IMG/M
3300031942\|Ga0310916_10348562	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300031945\|Ga0310913_10054094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2629	Open in IMG/M
3300031946\|Ga0310910_11219393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300031947\|Ga0310909_11307719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	583	Open in IMG/M
3300032001\|Ga0306922_12235107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300032042\|Ga0318545_10236467	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300032055\|Ga0318575_10280423	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300032059\|Ga0318533_11307777	Not Available	530	Open in IMG/M
3300032063\|Ga0318504_10654767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300032064\|Ga0318510_10018018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2204	Open in IMG/M
3300032064\|Ga0318510_10186212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300032094\|Ga0318540_10185408	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300032205\|Ga0307472_100301063	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300032261\|Ga0306920_102346114	Not Available	738	Open in IMG/M
3300033289\|Ga0310914_10285855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1485	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.73%
Host-Associated	Host-Associated	2.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.45%
Aquatic	Environmental → Aquatic	2.27%
Plants	Host-Associated → Plants	1.52%
Fungi	Host-Associated → Fungi	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.70%
Freshwater	Environmental → Aquatic → Freshwater	2.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.52%
Cave	Environmental → Terrestrial → Cave	0.76%
Mycelium	Host-Associated → Fungi → Mycelium	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.61%
Loam	Environmental → Terrestrial → Soil → Loam	6.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.27%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.52%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.76%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1008087582	3300002245	Forest Soil	MFFAVAIAAVSPSTDTWAARDVQAPNDFGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPESSIPLRILRAPPCPPGKHHLS*
Ga0062385_101546952	3300004080	Bog Forest Soil	MANTRAALNDTPKPGNDGDTKPPDKSCYVRGEDGRVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRSEAPESAIPPRILRALPCPPGKHHLS*
Ga0062386_1007155652	3300004152	Bog Forest Soil	VAWVTVPMANTRAALNDTPKPGNDGDTKPPDKSCYVRGEDGRVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRSEAPESAIPPRILRALPCPPGKHHLS*
Ga0066683_103945422	3300005172	Soil	MWATSPSTDTCAALNEQPANDAAAKPMDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGGLVVRDEVPGSSIPLRILRAPPCPPGKHHLS*
Ga0066388_1038775341	3300005332	Tropical Forest Soil	MRIQYLAALCFIAAWMAIGVARADLNEPPENDIGAKPEDKSCYVREENGEVRFYLDGPLRDGELPYLQGRPIAGADGKLAVRDEVPQSAIPPRIMRAQPCPPGKHHLS*
Ga0066388_1062724332	3300005332	Tropical Forest Soil	VPREIPFSTALLLAIATVWTTGALAPVDARAAANEKPRDDGGGKPLDRSCYVREEDGVVRYYLEGPLRDGELPYLEGQPIMGADGRMIVRDEVPQSAIPPRILRAPPCPP
Ga0070698_1004919471	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPVRNSSAIFFAAAIASVVTSTADTWAALNEQPTNDAAAKPLDRSCYVHEADGLVRYYLEGPPRDGELPYLQGQPIIGADGGLVVRDEVPLSSIPLRILRAPPCPPGK
Ga0070699_1012435831	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAIGAVSPSTDTWAALDAQAPNDVGVKPLDRSCYVREEDGVVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPGSSIPQRILRAAPCPPGKHHLS*
Ga0070697_1003310262	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPVRNSSAIFFAAAIASVVTSTADTWAALNEQPTNDAAAKPLDRSCYVHEADGLVRYYLEGPPRDGELPYLQGQPIIGADGGLVVRDEVPLSSIPLRILRAPPCPPGKHHLS*
Ga0066700_111533911	3300005559	Soil	AIFFAMVIGAVSPSTDTWAALDEQAPNDVRVKQLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGGLVVRDEVPGSSIPLRILRAPPCPPGKHHLS*
Ga0099793_101659151	3300007258	Vadose Zone Soil	MVIGAVSPSTDTWAALDEQAPNDVRVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPESSIPLRILRAPPCPPGKHHLS*
Ga0099829_103948542	3300009038	Vadose Zone Soil	MASVITPRTDTRAAFNEQPANDVGAKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIAADGRLVVRDEAPQSSIPPRILRAPPCPPGKHHLS*
Ga0066709_1004394983	3300009137	Grasslands Soil	MKMQNLTAGFCALAMWATSPSTDIWAALNEQPANDAAAKPMDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGGLVVRDEVPGSSIPLRILRAPPCPPGKHHLS*
Ga0099792_107503692	3300009143	Vadose Zone Soil	MVIGAVSPSTDTWAALDEQAPNDVRVKPLDRTGDVREEDALARYYPEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPESSIPLRILRALPCPPGKHHLS*
Ga0126384_104578122	3300010046	Tropical Forest Soil	LNAVFLAGVVAWMVMREADSLAALNEIWRLGTDGDAKPLDRSCYVREEDGLVRYYLEGPLRDGELPYLQGQPITGADGKVIVRNEVPESDTPPRILRAPPCPAGKHHLS*
Ga0126373_105590991	3300010048	Tropical Forest Soil	MRIQYLAALCLIAAWIAMGVARADLNDQPRDDTVAKPPDKSCYVRGEDGDIRYYLEGPLRDGELPYLQGRPIPGADGKLAVRDEVPQSAIPPRILRAQPCPPGKHHLS*
Ga0126373_107616482	3300010048	Tropical Forest Soil	MAIGVARADLNEPAEDDIPAKPADKSCYVREENGEVRFYLEGPLHDGELPYLQGRPIAGADGKLLIHAEVPQSAIPPRILRAPPCPPGKHHLS*
Ga0126373_115415912	3300010048	Tropical Forest Soil	MAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS*
Ga0126373_116622162	3300010048	Tropical Forest Soil	VFLAGVVAWMVMREADSLAALNEIWRLGTDGDAKPLDRSCYVREEDGLVRYYLEGPLRDGELPYLQGQPITGADGKVIVRNEVPESDTPPRILRAPPCPAGKHHLS*
Ga0126373_117110773	3300010048	Tropical Forest Soil	MAWIAVSIADGRAALNETAKPGADGEAESLDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS*
Ga0126372_110286132	3300010360	Tropical Forest Soil	MRVAKRVRYSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS*
Ga0126378_102162903	3300010361	Tropical Forest Soil	MWTTGALAPVDARAAANEKPRDDGGGKPLDRSCYVREEDGVVRYYLEGPLRDGELPYLEGQPIMGADGRMIVRDEVPQSAIPPRILRAPPCPPGKHHLS*
Ga0126378_104661282	3300010361	Tropical Forest Soil	MRIQYLAALCLLTAWIAMGVARADLNDQPRDDTVAKPPDKSCYVRGEDGDIRYYLEGPLRDGELPYLQGRPIPGADGKLAVRDEVPQSAIPPRILRAQPCPPGKHHLS*
Ga0126379_100453836	3300010366	Tropical Forest Soil	MGVARADLNDQPRDDTVAKPPDKSCYVRGEDGDIRYYLEGPLRDGELPYLQGRPIPGADGKLAVRDEVPQSAIPPRILRAQPCPPGKHHLS*
Ga0126379_103954243	3300010366	Tropical Forest Soil	LLAIAAVWTTGALAPVDARAAANEKPRDDGGGKPLDRSCYVREEDGVVRYYLEGPLRDGELPYLEGQPIMGADGRMIVRDEVPQSAIPPRILRAPPCPPGKHHLS*
Ga0126381_1000081349	3300010376	Tropical Forest Soil	MAWIVVSIADGRAALNETAKPGADGEAESLDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS*
Ga0126381_1002783954	3300010376	Tropical Forest Soil	LLAIATVWTTGALAPVDARAAANEKPRDDGGGKPLDRSCYVREEDGVVRYYLEGPLRDGELPYLESQPIMGADGRMIVRDEVPQSAIPPRILRAPPCPPGKHHLS*
Ga0137389_104793441	3300012096	Vadose Zone Soil	MASAMTPRTDTRAAFNEQPANDVSAKPLDRSCYVREEDGLVHYYLEGPPRDGELPYLQAQPTIGADGKLVVRDEVPPSAIPPRILRAPPCPPGKHHLS*
Ga0153990_10741521	3300012169	Attine Ant Fungus Gardens	SNENPGNDTGAKPLDRSCYVREEDGLVRYYLEGPVRDGELPYLQGQPVTGPDGKMLVRDEVPESAIPPRILRAPPCPPGKHHLS*
Ga0137363_101800943	3300012202	Vadose Zone Soil	MVIGAVSPSTDTWAALDEQAPNDVRVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVMRDEVPGSSIPLRILRAPPCPPGKHHLS*
Ga0137363_103715192	3300012202	Vadose Zone Soil	MKMQNLTAGFWALAMSAVSPSTDTWAALNEQPANDAAAKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPGSSIPLRILRAPPCPPGKHHLS*
Ga0137399_117747931	3300012203	Vadose Zone Soil	MAVALAVTPSTDAWAALNEQPANDVGVKPVDRSCDVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVARDEVPQSSIPLRVLRAPPCPPGKHH
Ga0137362_100979842	3300012205	Vadose Zone Soil	VSPSTDTWAARDVQAPNDFGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPASSIPLRILRAPPCPPGKHHLS*
Ga0137377_113377031	3300012211	Vadose Zone Soil	VSPSTDTWAALDEQAPNDVRVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPESSIPLRILRAPPCPPGKHHLS*
Ga0137360_105945923	3300012361	Vadose Zone Soil	MVIGAVCPRTGPWAALNEQAPNDVGVKPLDRSCYVREEGGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPASSIPLRILRAPPCPPGKHHLS*
Ga0137360_106363642	3300012361	Vadose Zone Soil	MKMQDLTPVSKRPRNSTAIFFAVAVWAVSPRTDAWGALNEQAPNDVGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPQSSIPLRILRAPPCPPGKHHLS*
Ga0137361_104339733	3300012362	Vadose Zone Soil	MAIGAVCPRTGPWAALNEQAPNDVGVKPLDRSCYVREEGGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPASSIPLRILRAPPCPPGKHHLS*
Ga0137397_102754512	3300012685	Vadose Zone Soil	MAVALAVTPRTDAWAGLNEQPANDVGVKPLDRSCYVREENGLVRYYLDGPPRDGELPYLQGQPIIGADGRLVARDEVPQSSIPLRVLRAPPCPPGKHHLS*
Ga0137359_104498703	3300012923	Vadose Zone Soil	MAIGAVSPSTDTWAALDEQTPNDVGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPHLQGQQIIGADGRLVVRDEVPRSSIPLRILRAPPCPPGKHHLS*
Ga0137359_107177372	3300012923	Vadose Zone Soil	VSPRTDAWGALNEQAPNDVGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPASSIPLRILRAPPCPPGKHHLS*
Ga0137359_112836531	3300012923	Vadose Zone Soil	MVIGAVSPSTDTWAALDEQAPNDVRVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVLRDEVPESSIPLRILRASPCPPGKHHLS*
Ga0137419_101128453	3300012925	Vadose Zone Soil	VQAPNDFGVKPLDRSCYVREGDGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPESSIPLRILRAPPCPTGKHHLS*
Ga0137419_105415252	3300012925	Vadose Zone Soil	MAIGAVCPRTGPWAALNEQAPNDVGVKPLDRSCYVREEGGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPASSTPLRILRAPPCPPGKHHLS*
Ga0137404_105618693	3300012929	Vadose Zone Soil	VSPSTDAWAALDVQAPNDFGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPLIGTDGRLVVRDEVPESSIPLRILRAPPCPPGKHHLS*
Ga0137407_102178472	3300012930	Vadose Zone Soil	VFPSTDAWAALDVQAPNDFGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPLIGTDGRLVVRDEVPESSIPLRILRAPPCPPGKHHLS*
Ga0137407_109893762	3300012930	Vadose Zone Soil	MAVTGAVTPGTDAWAALNEQPATDAGIKPLDRSCYVREEDGLVRYYLEGPLRDGELPYIQGQPVIGADGGLVMRDEVPETSIPPRILRALPCPPGKHHLS*
Ga0137407_116224162	3300012930	Vadose Zone Soil	MALWAVTPRTEAWAVSNEQPANDAVAKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGGLVVRDEVPVSSIPLRILRAPPCPPGKHHLS*
Ga0126369_106952693	3300012971	Tropical Forest Soil	MRIQYLAALCLLTVWIAMGVARADLNDQPRDDTVAKPPDKSCYVREEDGDIRYYLEGPLRDGELPYLQGRPIAGADGKLAVRDEVPQSAIPPRIMRAQPCPPGKHHLS*
Ga0182036_116651171	3300016270	Soil	EVVNLRSPSCGSMRIQHLMALCFIAACMAMEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQGRPIAGADGKLTVRDEVPQSAIPPRILRAPPCPPGKHHLS
Ga0182036_117682821	3300016270	Soil	MVIPEADSLAALNEIWRLSTDGDAKPLDRSCYVREEDGLVRYYLEGPLRDGELPYLQGQPITGADGKVIVRNEVPESDTPPRILRAPPCPAGRHHLS
Ga0182032_116774542	3300016357	Soil	MRIQHLMALCFIAAWMAMEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQ
Ga0182040_1000573710	3300016387	Soil	LVWAMAWIAVSIADGRAALNETAKPGADGEAESLDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0182040_100785823	3300016387	Soil	MRVAKRVRYSTAILLAGVVTWMAIPIGGSRAALNEIPKLGTDGDAKPLDRSCYVREEDGLVRYYLEGPLRDGDLPYLQGQPVTGADGKAVMRNDAP
Ga0182039_109276032	3300016422	Soil	MVIPEADSLAALNEIWRLSTDGDAKPLDRSCYVREEDGLVRYYLECPLRDGELPYLQGQPITGADGKVIVRNEVPESDTPPRILRAPPCPAGKHHLS
Ga0182039_111637772	3300016422	Soil	LMRAQYLTALCFIAAWMAMGVARADLNEPTADDTGAKPADKSCYVREENGEVRFYLDGPLRDGELPYLQGRPIAGADGKLAVRDEVPQSAIPPRIMRAQPCPPGKHHLS
Ga0182038_109915732	3300016445	Soil	MRAQYLTALCFIAAWMAMGVARADLNEPTADDTGAKPADKSCYVREENGEVRFYLDGPLRDGELPYLQGRPIAGADGKLAVRDEVPQSAIPPRILRAQPCPPGKHHLF
Ga0187783_102364721	3300017970	Tropical Peatland	MRIQHLTALCFIAAWMAMGVARADLNEPPENDTGAKPADKSCYVHEENGEVRFYLDGPLRDGEVPYLQGRPVVGDDGKLAV
Ga0187783_103942642	3300017970	Tropical Peatland	MRIQYSTALYFLAAWLAIGVARADLNEPPEDDAGAKPADKSCYVREENGEIHFYLDGPLRDGELPYLQGRPIAGADGKLVVRDDVPQSAIPPRILRAPPCPPGKHHLS
Ga0187772_106866522	3300018085	Tropical Peatland	LMRAQYLTALCFIAASMAMGVTRADLNEPTADDTGTKPADKSCYVREENGEVRFYLDGPLRDGELPYLQGRPIAGADGKLAVRDEVPQSAIPPRILRAPPCPPGKHHLS
Ga0210407_1000106619	3300020579	Soil	MVIGAVSPSTDTWAALDEQAPNDVRVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPESSIPLRILRAPPCPPGKHHLS
Ga0210407_104359551	3300020579	Soil	MFFAMAIGAVSPSTDTWAALDEQAPSDVRVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPLIGTDGRLVVRDEAPESSIP
Ga0210407_108230032	3300020579	Soil	WAALNEQAPNDISVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGGLVVRDEVPGSSVPLRILRAPPCPPGKHHLS
Ga0210401_112930521	3300020583	Soil	MAIGAVSPSTDAWAARDEQAPNDFGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPLIGTDGRLVARDQVPESSIPLRILRAPPCPPGKHHLS
Ga0210406_110625382	3300021168	Soil	MAIGAVSPSTDAWAARDEQAPNDFGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPLIGTDGRLVGRDQVPESSIPLRI
Ga0210400_103502581	3300021170	Soil	RLWKSTAIFSAMVIGAVSPSTDTWAALDEQAPNDVRVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPESSIPLRILRAPPCPPGKHHLS
Ga0213872_102025811	3300021361	Rhizosphere	MRIQDLTALCFIAVWLAIGVARADLNEPREGDDAAKPADKSCYVREENGEVRFYLDGPLRDGELPYLQGRPIAGADGKLVVRDEVPQSAIPPRILRAPPCP
Ga0213872_103504851	3300021361	Rhizosphere	MGVARADLNEQPRDDTVAKPPDKSCYVRGEDGDISYYLEGPLRDGELPYLQGRPIAGADGKLAVRDEVPQSAIPPRIMRAQPCPPGKHHLS
Ga0210394_113677781	3300021420	Soil	MVIGAVSPSTDTWAALDEQAPNDVRVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPESSIPLRILRAPPC
Ga0210384_106352482	3300021432	Soil	MAIGAVSPSTDAWAARDEQAPNDFGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPLIGTDGRLVGRDQVPESSIPLRILRAPPCPPGKHHLS
Ga0213878_101237852	3300021444	Bulk Soil	MRIQYLAALCLIAAWIAMGVARADLNEQPRDDTVAKPPDKSCYVRGEDGDISYYLEGPLRDGELPYLQGRPIAGADGKLAVRDEVPQSAIPPRIMRAQPCPPGKHHLS
Ga0187846_100145025	3300021476	Biofilm	VAKRAGYSGAIFLAGVVAWTAVPIAYSRAAALNEIPKPGADGDARPLDRSCYVREENGLVRYYLDGPLRDGELPYLQGQPVAGPDGQVVTRDEIPDSAIPPRILRAPPCPLGKHHLP
Ga0126371_100258153	3300021560	Tropical Forest Soil	VWTTGALAPVDARAAANEKPRDDGGGKPLDRSCYVREEDGVVRYYLEGPLRDGELPYLEGQPIMGADGRMIVRDEVPQSAIPPRILRAPPCPPGKHHLS
Ga0126371_101696873	3300021560	Tropical Forest Soil	MGVARADLNDQPRDDTVAKPPDKSCYVRGEDGDIRYYLEGPLRDGELPYLQGRPIPGADGKLAVRDEVPQSAIPPRILRAQPCPPGKHHLS
Ga0126371_122199343	3300021560	Tropical Forest Soil	MRIQHLMALCFTTTWMAIGVARADLNEPPEDDIPAKPADKSCYVREENGEVRFYLEGPLHDGELPYLQGRPIAGADGKLLIRDEVPQSAIPPRILRAPPCLPG
Ga0242662_100979511	3300022533	Soil	VSSCISMKMENLTAGFCALAMWATSPSTDTWAALNEQAPNDISVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPLIGTDGRLVVRDEVPESSIPLRILRAPPCPPGKHHLS
Ga0209217_10186631	3300027651	Forest Soil	MAVALAVTPRTDAWAALNEQPANDAAAKPLDRSCYVREEDGLVRYYLEGPPRDGEPPYLQGQPIIGADGRLIVRDEVPQSSIPLRILRAPPCPPGKHHLS
Ga0209446_10274433	3300027698	Bog Forest Soil	MANTRAALNDTPKPGNDGDTKPPDKSCYVRGEDGRVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRSEAPESAIPPRILRALPCPPGKHHLS
Ga0209526_107329171	3300028047	Forest Soil	MAVALAVTPRTDAWAALNEQPANDAAAKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPQSSIPLRILRAPPCPPGKHHLS
Ga0209526_108632811	3300028047	Forest Soil	MFFAVAIGAVSPSTDAWAALDVQAPNDFGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPESSIPLRILRAPPCPPGKHHLS
Ga0137415_100324874	3300028536	Vadose Zone Soil	MAIGAVCPRTGPWAALNEQAPNDVGVKPLDRSCYVREEGGLVRYYLEGPPRDGELPYLQGQPIIGADGRLVVRDEVPASSIPLRILRAPPCPPGKHHLS
Ga0170824_1239155202	3300031231	Forest Soil	MLVRNSSAIFFAAAIASVVTSTTDTWAALNEQPANDAAAKPLDRSCYVHEADGLVRYYLEGPPRDGELPYIQGQPIIGADGGLVVRDEVPESSIPLR
Ga0170820_112861451	3300031446	Forest Soil	MLVRNSSAIFFAAAIASVVTSTTDTWAALNEQPANDAAAKPLDRSCYVREADGLVRYYLDGPPRDGELPYLQGQPIIGADGGLVVRDEVPESSIPLRILRAPPCPPGKHHLS
Ga0170820_160745852	3300031446	Forest Soil	MWAVFLRTDAWAALNEQAPNDIGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRQVVRDEVPESSIPLRILRAPPCPPGKHHLS
Ga0318516_100222593	3300031543	Soil	MAWIAVSIADGRAALNETAKPGADGEAESLDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0318516_106746081	3300031543	Soil	MVMPEADSLAALNEIWRLSTDGDAKPLDRSCYVREEDGLVRYYLEGPLRDGELPYLQGQPITGADGKVIVRNEVPESDTPPRILRAPPCPAGKH
Ga0318541_100515332	3300031545	Soil	MRVAKRVRYSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318541_101010411	3300031545	Soil	MEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQSAIPPRILRAQPCPPGKHHLF
Ga0318541_101081332	3300031545	Soil	MAWIAVSIADGRAALNETAKPGADGEAKSFDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0318538_102753751	3300031546	Soil	MRVAKRVRHSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318571_100406722	3300031549	Soil	MAWIAVSMADGRAALNETAKPGADGEAESLDKSCYVRGGDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0318528_104072222	3300031561	Soil	MRIQHLMALCFIAAWMAMEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQSAIPPRILRAQPCPPGKHHLF
Ga0310915_112178802	3300031573	Soil	SCDLMRAQYLTALCFIAAWMAMGVARADLNEPTADDTGAKPADKSCYVREENGEVRFYLDGPLRDGELPYLQGRPIAGADGKLTVRDEVPQSAIPPRILRAPPCPPGKHHLS
Ga0318542_101408732	3300031668	Soil	MAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318561_100052722	3300031679	Soil	LVWAMAWIAVSIADGRAALNETAKPGADGEAKSFDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0307469_104973953	3300031720	Hardwood Forest Soil	AIFFAAAIASVVTSTADTWAALNEQPANDAAAAKPLDRSCYVHEADGLVRYYLEGPPRDGELPYLQGQPIIGADGGLVVRDEVPLSSIPLRILRAPPCPPGKHHLS
Ga0318501_100185741	3300031736	Soil	MRVAKRVRHSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESA
Ga0318502_100231674	3300031747	Soil	VIRNRYSSAIFLVWAMAWIAVSIADGRAALNETAKPGADGEAESLDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0318492_104761852	3300031748	Soil	LRSPSCGSMRIQHLMALCFIAAWMAMEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQSAIPPRILRAQPCPPGKHHLF
Ga0307477_100106048	3300031753	Hardwood Forest Soil	MVGVLAWAVMTIPLAATWASNENPGNDTGAKPLDRSCYVREEDGLVRYYLEGPVRDGELPYLQGQPVTGPDGKMLVRDEVPESAIPPRILRAPPCPPGKHHLS
Ga0307477_101182942	3300031753	Hardwood Forest Soil	MAIPVAGSRAALNEIARPGTDGDAEPLDRSCYVRGEDGLLRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318537_101733351	3300031763	Soil	VAKRVRHSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318554_106703182	3300031765	Soil	MEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQGRPIAGADGKLAVRDEVPQSAIPPRIMRAQPCPPGKHHLS
Ga0318509_101518553	3300031768	Soil	AKRVRYSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318509_106969532	3300031768	Soil	MRAQYLTALCFIAAWMAMGVARADLNEPTADDTGAKPADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQSAIPPRILRAQPCPPGKHHLF
Ga0318566_103526152	3300031779	Soil	MRVAKRVRHSTAILFTGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318548_101517891	3300031793	Soil	RVAKRVRHSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318550_101119591	3300031797	Soil	MAWIAVSIADGRAALNETAKPGADGEAKSFDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHL
Ga0318523_100395601	3300031798	Soil	NETAKPGADGEAKSFDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0307473_108733031	3300031820	Hardwood Forest Soil	MVIGAVSPSTDTWAALDEQAPNDVRVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPIIGTDGRLVVRDEVPESSIPLRILR
Ga0318567_100401853	3300031821	Soil	MAWIAVSIADGRAALNETAKPGADGEAKSFDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGEMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0306925_112256831	3300031890	Soil	MEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQSAIPPRILRAQPC
Ga0318551_102881341	3300031896	Soil	DLMRVAKRVRYSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318551_108527621	3300031896	Soil	QWAPSCGSMRIQYLAACLIAAWIAMGVARADLNEQPRDDTVAKPPDKSCYVRGEDGDIRYYLEGPLRDGELPYLQGRPIAGADGKLAVRDEVPQSAIPPRIMRAQPCPPGKHHLS
Ga0318520_106236381	3300031897	Soil	MEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQSAIPPRILRAQPCPPGKHHL
Ga0306923_100024631	3300031910	Soil	MRVAKRVRHSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPG
Ga0306921_108349452	3300031912	Soil	MVMPEADSLAALNEIWRLSTDGDAKPLDRSCYVREEDGLVRYYLEGPLRDGELPYLQGQPITGADGKVIVRNEVPESDTPPRILRAPPCPAGKHHLS
Ga0310912_104738262	3300031941	Soil	LNAVFLAGVVAWMVIPEADSLAALNEIWRLSTDGDAKPLDRSCYVREEDGLVRYYLEGPLRDGELPYLQGQPITGADGKVIVRNEVPESDTPPRILRAPPCPAGKHHLS
Ga0310916_103485622	3300031942	Soil	MRIQHLMALCFIAAWMAMEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQGRPIAGADGKLTVRDEVPQSAIPPRIMRAQPCPPGKHHLS
Ga0310913_100540944	3300031945	Soil	SAIFLVWAMAWIAVSIADGRAALNETAKPGADGEAESLDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0310910_112193932	3300031946	Soil	WMVMPEADSLAALNEIWRLSTDGDAKPLDRSCYVREEDGLVRYYLEGPLRDGELPYLQGQPITGADGKVIVRNEVPESDTPPRILRAPPCPAGKHHLS
Ga0310909_113077191	3300031947	Soil	ADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQSAIPPRILRAQPCPPGKHHLF
Ga0306922_122351071	3300032001	Soil	MRIQHLMALCFIAAWMAMEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQSAIPPRILRAQPCP
Ga0318545_102364671	3300032042	Soil	FLVWAMAWIAVSIADGRAALNETAKPGADGEAESLDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0318575_102804232	3300032055	Soil	AKRVRHSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS
Ga0318533_113077771	3300032059	Soil	CFIAAWMAMEVARADLNEPPRDGAGAKAADKSCYVREENGEVRFYLDGPLRDGELPYLQSRPIAGADGRLVARDEVPQSAIPPRILRAQPCPPGKHHLF
Ga0318504_106547672	3300032063	Soil	MAWIAVSIADGRAALNETAKPGADGEAESLDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHALPCPPSKHHLS
Ga0318510_100180184	3300032064	Soil	MAWIAVSIADGRAALNETAKPGADGEAESLDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGEMIVRDEVPESAIPPRILHALPCPPGKHHLS
Ga0318510_101862121	3300032064	Soil	MAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPG
Ga0318540_101854082	3300032094	Soil	MAWIAVSIADGRAALNETAKPGADGEAKSFDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVSGRDGQMIVRDEVPESAIPPRILHVLPCPPGKHHLS
Ga0307472_1003010632	3300032205	Hardwood Forest Soil	MFFAMAIGAVSPSTNTWAALDVQAPNDFGVKPLDRSCYVREEDGLVRYYLEGPPRDGELPYLQGQPLIGTDGRLVARDQVPESSIPLRILRAPPCPPGKHHLS
Ga0306920_1023461141	3300032261	Soil	VAKRTRYSNAIFLAGVVAWTAAIADSRAALNEIPKLGTDGDAKPLDRSCYVREEDGLVRYYLEGPLRDGELPYLQGQPVTGADGKAVMRNEAPESAIPPRILRAPPCPPGKHHLS
Ga0310914_102858551	3300033289	Soil	LMRVAKRVRYSTAILLAGVVTWMAIPIGGSRAALNEIARPGTEGDTKPPDKSCYVRGEDGLVRYYLEGPLRDGELPYLQGQPVAGPDGKVVVRNEAPESAIPPRILRALPCPPGKHHLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060626

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences