Metagenome Family F060521

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060521
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	45 residues
Representative Sequence	SLFDMPTPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Number of Associated Samples	85
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	96.21 %
% of genes from short scaffolds (< 2000 bps)	71.97 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (48.485 % of family members)
Environment Ontology (ENVO)	Unclassified (59.848 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF10137	TIR-like	3.03
PF13365	Trypsin_2	3.03
PF12532	DUF3732	3.03
PF06210	DUF1003	2.27
PF07728	AAA_5	2.27
PF00027	cNMP_binding	2.27
PF07883	Cupin_2	2.27
PF10592	AIPR	1.52
PF13508	Acetyltransf_7	1.52
PF00144	Beta-lactamase	1.52
PF03235	DUF262	1.52
PF00270	DEAD	1.52
PF00078	RVT_1	1.52
PF01810	LysE	0.76
PF13538	UvrD_C_2	0.76
PF02899	Phage_int_SAM_1	0.76
PF11185	DUF2971	0.76
PF13340	DUF4096	0.76
PF07510	DUF1524	0.76
PF00593	TonB_dep_Rec	0.76
PF02915	Rubrerythrin	0.76
PF13185	GAF_2	0.76
PF00589	Phage_integrase	0.76
PF12770	CHAT	0.76
PF14903	WG_beta_rep	0.76
PF13280	WYL	0.76
PF00392	GntR	0.76
PF13155	Toprim_2	0.76
PF13203	DUF2201_N	0.76
PF03551	PadR	0.76
PF14464	Prok-JAB	0.76
PF13432	TPR_16	0.76
PF13561	adh_short_C2	0.76
PF13418	Kelch_4	0.76
PF08238	Sel1	0.76
PF00989	PAS	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG4420	Uncharacterized membrane protein	Function unknown [S]	2.27
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	1.52
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.52
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.52
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.52
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.76
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.76
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.76
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.76
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.36 %
Unclassified	root	N/A	38.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.36 %
Unclassified	root	N/A	38.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.36 %
Unclassified	root	N/A	38.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.27 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.55 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.52 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.52 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.76 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.52 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.76 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	0.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	3.79 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	1.52 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.52 %
Arcobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae	0.76 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.76 %
Candidatus Staskawiczbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Staskawiczbacteria	0.76 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.76 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.76 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	2.27 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.52 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	0.76 %
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_38_12b	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Staskawiczbacteria → Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_38_12b	0.76 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.76 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.76 %
Aliarcobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae → Aliarcobacter	0.76 %
unclassified Terriglobus	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.76 %
Halomonas shengliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas shengliensis	0.76 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	2.27 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.52 %
Aliarcobacter butzleri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae → Aliarcobacter → Aliarcobacter butzleri	0.76 %
Terriglobus sp. TAA 43	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	0.76 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	0.76 %
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_38_12b	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Staskawiczbacteria → Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_38_12b	0.76 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.76 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.76 %
Halomonas shengliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas shengliensis	0.76 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009760\|Ga0116131_1225703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300014165\|Ga0181523_10755173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	531	Open in IMG/M
3300014167\|Ga0181528_10837990	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300014168\|Ga0181534_10461221	Not Available	713	Open in IMG/M
3300014169\|Ga0181531_10235932	Not Available	1114	Open in IMG/M
3300014199\|Ga0181535_10046418	Not Available	3033	Open in IMG/M
3300014200\|Ga0181526_10784344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300014200\|Ga0181526_11021368	Not Available	519	Open in IMG/M
3300014491\|Ga0182014_10233147	All Organisms → cellular organisms → Bacteria → Proteobacteria	975	Open in IMG/M
3300014491\|Ga0182014_10250080	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300014491\|Ga0182014_10411775	Not Available	673	Open in IMG/M
3300014492\|Ga0182013_10056904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	2912	Open in IMG/M
3300014492\|Ga0182013_10392630	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300014493\|Ga0182016_10054749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3075	Open in IMG/M
3300014493\|Ga0182016_10374749	Not Available	849	Open in IMG/M
3300014496\|Ga0182011_10267466	Not Available	1143	Open in IMG/M
3300014499\|Ga0182012_10072342	All Organisms → cellular organisms → Bacteria	2678	Open in IMG/M
3300014499\|Ga0182012_10530132	Not Available	762	Open in IMG/M
3300014499\|Ga0182012_10731371	Not Available	630	Open in IMG/M
3300014499\|Ga0182012_10811455	Not Available	593	Open in IMG/M
3300014499\|Ga0182012_10977973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	532	Open in IMG/M
3300014502\|Ga0182021_11165415	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300014838\|Ga0182030_10081787	All Organisms → cellular organisms → Bacteria	4654	Open in IMG/M
3300014838\|Ga0182030_10133730	All Organisms → cellular organisms → Bacteria	3232	Open in IMG/M
3300014838\|Ga0182030_10459962	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300014838\|Ga0182030_10526667	Not Available	1169	Open in IMG/M
3300014838\|Ga0182030_10623481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1033	Open in IMG/M
3300014838\|Ga0182030_10836481	Not Available	836	Open in IMG/M
3300014839\|Ga0182027_10688626	All Organisms → cellular organisms → Bacteria → Acidobacteria	1085	Open in IMG/M
3300014839\|Ga0182027_10908893	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300014839\|Ga0182027_11657719	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300017988\|Ga0181520_10175683	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300017988\|Ga0181520_10204893	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300017988\|Ga0181520_10693131	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300018040\|Ga0187862_10146398	Not Available	1595	Open in IMG/M
3300018044\|Ga0187890_10323270	Not Available	866	Open in IMG/M
3300018044\|Ga0187890_10866828	Not Available	509	Open in IMG/M
3300019787\|Ga0182031_1134442	Not Available	1419	Open in IMG/M
3300019787\|Ga0182031_1206119	Not Available	1257	Open in IMG/M
3300019787\|Ga0182031_1221377	All Organisms → cellular organisms → Bacteria → Acidobacteria	1558	Open in IMG/M
3300019787\|Ga0182031_1368695	Not Available	1854	Open in IMG/M
3300022526\|Ga0224533_1017115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1263	Open in IMG/M
3300022526\|Ga0224533_1060506	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300022824\|Ga0224518_1003738	Not Available	1009	Open in IMG/M
3300022875\|Ga0224553_1057206	Not Available	837	Open in IMG/M
3300022877\|Ga0224527_1009957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	2697	Open in IMG/M
3300023068\|Ga0224554_1081047	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300025473\|Ga0208190_1010998	Not Available	2272	Open in IMG/M
3300025612\|Ga0208691_1127726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300026456\|Ga0255351_1011225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2509	Open in IMG/M
3300028070\|Ga0255353_1017386	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300028070\|Ga0255353_1047276	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae → Aliarcobacter → Aliarcobacter butzleri	900	Open in IMG/M
3300028084\|Ga0255356_1016732	Not Available	2088	Open in IMG/M
3300028087\|Ga0255354_1038745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1088	Open in IMG/M
3300028090\|Ga0255349_1011188	All Organisms → cellular organisms → Bacteria → Proteobacteria	2350	Open in IMG/M
3300028560\|Ga0302144_10098636	Not Available	939	Open in IMG/M
3300028565\|Ga0302145_10132704	Not Available	842	Open in IMG/M
3300028566\|Ga0302147_10096125	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300028762\|Ga0302202_10439421	Not Available	599	Open in IMG/M
3300028765\|Ga0302198_10038149	All Organisms → cellular organisms → Bacteria	3089	Open in IMG/M
3300028765\|Ga0302198_10116234	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300028785\|Ga0302201_10001067	All Organisms → cellular organisms → Bacteria	24129	Open in IMG/M
3300028788\|Ga0302189_10294743	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300028788\|Ga0302189_10378558	Not Available	558	Open in IMG/M
3300028813\|Ga0302157_10046439	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300028854\|Ga0302268_1008808	All Organisms → cellular organisms → Bacteria → Acidobacteria	3047	Open in IMG/M
3300028859\|Ga0302265_1020560	All Organisms → cellular organisms → Bacteria	2514	Open in IMG/M
3300028860\|Ga0302199_1067449	Not Available	1202	Open in IMG/M
3300028867\|Ga0302146_10057332	Not Available	1663	Open in IMG/M
3300028873\|Ga0302197_10078453	Not Available	1720	Open in IMG/M
3300028874\|Ga0302155_10026384	All Organisms → cellular organisms → Bacteria	2803	Open in IMG/M
3300028882\|Ga0302154_10628554	Not Available	504	Open in IMG/M
3300028909\|Ga0302200_10181403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1068	Open in IMG/M
3300029883\|Ga0311327_10597034	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300029908\|Ga0311341_10496870	Not Available	696	Open in IMG/M
3300029911\|Ga0311361_10261571	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300029913\|Ga0311362_10034578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8154	Open in IMG/M
3300029915\|Ga0311358_10186111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	1913	Open in IMG/M
3300029915\|Ga0311358_11063618	Not Available	550	Open in IMG/M
3300029918\|Ga0302143_1006232	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300029922\|Ga0311363_10067240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5286	Open in IMG/M
3300029922\|Ga0311363_10199678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2433	Open in IMG/M
3300029922\|Ga0311363_11193053	Not Available	643	Open in IMG/M
3300029939\|Ga0311328_10883586	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300029944\|Ga0311352_10685683	Not Available	810	Open in IMG/M
3300029953\|Ga0311343_10164965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2373	Open in IMG/M
3300029954\|Ga0311331_10136894	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
3300029955\|Ga0311342_10174522	Not Available	2120	Open in IMG/M
3300029955\|Ga0311342_10403441	Not Available	1186	Open in IMG/M
3300029955\|Ga0311342_10415420	Not Available	1162	Open in IMG/M
3300029955\|Ga0311342_10674688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	820	Open in IMG/M
3300029982\|Ga0302277_1013724	Not Available	4743	Open in IMG/M
3300029982\|Ga0302277_1213470	Not Available	746	Open in IMG/M
3300029982\|Ga0302277_1223357	Not Available	723	Open in IMG/M
3300029986\|Ga0302188_10138438	Not Available	1057	Open in IMG/M
3300029986\|Ga0302188_10209889	Not Available	821	Open in IMG/M
3300029988\|Ga0302190_10311256	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300029992\|Ga0302276_10140914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1194	Open in IMG/M
3300029993\|Ga0302304_10362660	Not Available	527	Open in IMG/M
3300030004\|Ga0302186_10161906	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300030011\|Ga0302270_10524434	Not Available	616	Open in IMG/M
3300030020\|Ga0311344_10054543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4914	Open in IMG/M
3300030020\|Ga0311344_10474353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300030041\|Ga0302274_10129410	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300030045\|Ga0302282_1229468	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300030049\|Ga0302191_10361601	Not Available	529	Open in IMG/M
3300030051\|Ga0302195_10066413	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300030051\|Ga0302195_10450611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	552	Open in IMG/M
3300030506\|Ga0302194_10126810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300030508\|Ga0302185_10025079	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Staskawiczbacteria → Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_38_12b	2628	Open in IMG/M
3300030687\|Ga0302309_10517367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	568	Open in IMG/M
3300030688\|Ga0311345_10049681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5303	Open in IMG/M
3300031233\|Ga0302307_10493118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	620	Open in IMG/M
3300031258\|Ga0302318_10064892	Not Available	1530	Open in IMG/M
3300031261\|Ga0302140_10131272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2423	Open in IMG/M
3300031261\|Ga0302140_10656011	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300031524\|Ga0302320_10031613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10034	Open in IMG/M
3300031524\|Ga0302320_10063744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	6346	Open in IMG/M
3300031524\|Ga0302320_10125423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3990	Open in IMG/M
3300031524\|Ga0302320_10313561	Not Available	2069	Open in IMG/M
3300031524\|Ga0302320_12175547	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300031788\|Ga0302319_10127392	All Organisms → cellular organisms → Bacteria	3510	Open in IMG/M
3300031788\|Ga0302319_10190963	Not Available	2620	Open in IMG/M
3300031788\|Ga0302319_10246359	All Organisms → cellular organisms → Bacteria → Proteobacteria	2174	Open in IMG/M
3300031788\|Ga0302319_10383969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas shengliensis	1579	Open in IMG/M
3300031788\|Ga0302319_10698610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	1029	Open in IMG/M
3300031788\|Ga0302319_11213985	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300033818\|Ga0334804_110870	Not Available	705	Open in IMG/M
3300033982\|Ga0371487_0445636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300033983\|Ga0371488_0106500	Not Available	1543	Open in IMG/M
3300034130\|Ga0370494_024711	All Organisms → cellular organisms → Bacteria → Acidobacteria	1548	Open in IMG/M
3300034282\|Ga0370492_0367844	Not Available	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.88%
Aquatic	Environmental → Aquatic	12.12%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	65.91%
Soil	Environmental → Terrestrial → Soil	21.97%
Freshwater	Environmental → Aquatic → Freshwater	12.12%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	65.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.12%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	65.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	20.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.52%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	48.48%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	16.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	9.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.58%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.79%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.03%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.27%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.52%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022526	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 10-14	Environmental	Open in IMG/M
3300022824	Peat soil microbial communities from Stordalen Mire, Sweden - IR.B.S.T-25	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300022877	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T0	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300028070	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T25	Environmental	Open in IMG/M
3300028084	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T100	Environmental	Open in IMG/M
3300028087	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T50	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028854	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_1	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030508	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116131_12257032	3300009760	Peatland	TATTPAGAAAEPEGHSAFAEIGDDGPIEEVEELDDAA*
Ga0181523_107551731	3300014165	Bog	SLFDMPPAPATTPTAAPAEPEDDPGFAEIDDDEPIEEAEELDDAA*
Ga0181528_108379901	3300014167	Bog	SLFDMPPAPATTPTAAPAEPEDDPGFAEIDDDEPIEEFEELDDAA*
Ga0181534_104612211	3300014168	Bog	ITATTPTTAPAEPEDDPGFAEIDDDEPIEEVEELDDAA*
Ga0181531_102359321	3300014169	Bog	TPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDVA*
Ga0181535_100464181	3300014199	Bog	KPAPQKPASLFDMPITATTPTTAPAEPEDDPGFAEIDDDEPIEEVEELDDAA*
Ga0181526_107843441	3300014200	Bog	QKPASLFDMPAPDTTPTTALTEPEEDPGFAELDDDEPLEDPEELDDAA*
Ga0181526_110213681	3300014200	Bog	DMLPAHATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDVA*
Ga0182014_102331471	3300014491	Bog	KPTEPAKPAPQKPASLFDMPAPAATPTVTPAETDEDPGFAEIDDDEEPGEFGELDDAA*
Ga0182014_102500801	3300014491	Bog	PASLFDMPTPATTPTTMPAEPEDDPGFAEVDDDEPIEEVEELDDAA*
Ga0182014_104117751	3300014491	Bog	EPVKSAPQKSAGLFDMAPAPATTPTAALAEPEDDPGFAEVDDDEPIEEVEELDDAA*
Ga0182013_100569041	3300014492	Bog	PAPATTPTTALAEPEDDPGFAEIDDDEPIEEVEELDDAA*
Ga0182013_103926301	3300014492	Bog	PASLFDMPTPATTPTTAPAEPEDDPGFAEIDDDEPIEEAEELDDAA*
Ga0182016_100547491	3300014493	Bog	AEPAKPAPQKPASLFDMPTPAATTFVTPAESDEDLGFAEIDDDDPIEEVEELDDAA*
Ga0182016_103747492	3300014493	Bog	PAATPTTAPAEPEDDPGFAEIDDDEPIEEVEELDDAA*
Ga0182011_102674662	3300014496	Fen	PTTPTAAPVESEDDPGFAEIDDDEPIGEVEELDDVA*
Ga0182012_100723421	3300014499	Bog	SLFDMPPAPATTPTAAPAEPEDDAGFAEIDDDEPIEEVEELDDAA*
Ga0182012_105301322	3300014499	Bog	APQKPASLFDMPTPAVTPTAAPAEPEDDPGFAEIDDDEPIEEIEELDDAA*
Ga0182012_107313711	3300014499	Bog	PQKPASLFDMPITATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA*
Ga0182012_108114551	3300014499	Bog	QKPASLFDMPTPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA*
Ga0182012_109779731	3300014499	Bog	MPTPATTPTAAQAEAEDDPGFAEIDDDEPIEEVEELDDAA*
Ga0182021_111654152	3300014502	Fen	ATTPTAAPAEPEDDPGFAEIDDDEPIEEFEELDDAA*
Ga0182030_100817871	3300014838	Bog	ATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA*
Ga0182030_101337301	3300014838	Bog	KPAPQKSASLFDMPTPAATPTTAPAEPEDDPGFAEIDDDEPIEEVEELDDAA*
Ga0182030_104599622	3300014838	Bog	MPTPATTATVTPAESDEDLGFAEIDDDDPIEEVEELDDAA*
Ga0182030_105266671	3300014838	Bog	KPAEPAKPAPQKPASLFDMPTPAATPTAAPAEAEDDPGFAEIDDGEPIEEVEELDDAA*
Ga0182030_106234812	3300014838	Bog	PATTATVTPAESDEDLGFAEIDDDDPIEEVEELDDAA*
Ga0182030_108364811	3300014838	Bog	KSASLFDLPPAPATTPTAAPAEAEDDPGFAEIDDDEPIEEAEELDDAA*
Ga0182027_106886262	3300014839	Fen	AEPAKPAPQKPASLFDMPTPAATLTAAPAEPEDDPGFAEIDDDEPIEEFEELDDAA*
Ga0182027_109088933	3300014839	Fen	AEPVKPAPQKPASLFDMPIPATTPTTAPAEPEDDPRFAEIDDDEPIEEVEELDDAA*
Ga0182027_116577192	3300014839	Fen	ATTTVTPAESDEDPKFAEIDDDDLIEEVEELDDAA*
Ga0181520_101756831	3300017988	Bog	MPTPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0181520_102048931	3300017988	Bog	AKPAEPTKPAPQKPASLFDMPALAATTTVTPVESDEDPGFAEIDDDEEPEEFEALDDAA
Ga0181520_106931312	3300017988	Bog	TTPAAAPAEPEDDPGFAEIDDDEPIEEFEELDDAA
Ga0187862_101463981	3300018040	Peatland	APQKSASLFDMPSAPTTTPTAAPAEPENDPGFAEIDDDEPIEEVEELDDAA
Ga0187890_103232701	3300018044	Peatland	LFDMPTPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0187890_108668281	3300018044	Peatland	PQKPASLFDMPAPVATPTTAPAEPEDDPGFAEIDDDEPIEETEELDDAA
Ga0182031_11344421	3300019787	Bog	PQPSFTPAESDEDLGFAEIDDDDPIEEVEELDDAA
Ga0182031_12061192	3300019787	Bog	PAATTFVTPAESDEDLGFAEIDDDDPIEEVEELDDAA
Ga0182031_12213772	3300019787	Bog	VAKPVETAKPAPQKPASLFDMPPTPAITPTAAPVESEDDPGFAEIDDDEPLEETEELDDA
Ga0182031_13686953	3300019787	Bog	KPLRYADTSATPAAAPTEPEEDPGFAEIDDDKPVEESEELEDAA
Ga0224533_10171152	3300022526	Soil	KPAPQKSASLFDLPPAPATTPTAAPAEAEDDPGFAEIDDDEPIEEVEELDDAA
Ga0224533_10605061	3300022526	Soil	ASLFDMPAPPATATATPVEPEDDPGFAEIDDDDPEEFEELDNAA
Ga0224518_10037382	3300022824	Soil	ATTPTAAPAEAEDDPGFAEIDDDEPIEEVEELDDAA
Ga0224553_10572061	3300022875	Soil	LFDMPQAPATTPTAAPAEPEDDAGFAEIDDDEPIEEVEELDDAA
Ga0224527_10099574	3300022877	Soil	PQKPASLFDMPTPAATPTAAPAEPEDDPGFAEIDDDEPIEEAEELDDAA
Ga0224554_10810472	3300023068	Soil	PVEPVKPAPQKSVGLFDMPPAPATTPTAAPAEPEDESGFAEIDDDEPIEEIEELDDAA
Ga0208190_10109981	3300025473	Peatland	PVATPTTAPAEPEDDPGFAEIDDDEPIEETEELDDAA
Ga0208691_11277262	3300025612	Peatland	FDAPAPAVTTAVAPAESEEDPGFAEVDDDEPIEENEVLDDAA
Ga0255351_10112251	3300026456	Soil	PTEPAKPAQQKPPSLFDIPTAATNPITTPAEPEEDPGFAELNDDEPLEDPEELDDVA
Ga0255353_10173864	3300028070	Soil	PTPAATATVTPAESDDDLGFAEIDDDDPIEEVEELDEAA
Ga0255353_10472762	3300028070	Soil	APQKPASLFDMPTPATATTVTSAESDEDTGFAEIDDDDAPEEFEELDEVA
Ga0255356_10167321	3300028084	Soil	AKSAPQKSASLFDMPTPAATAGVTPTESDEDLGFAEIDDDGPIEEVEELDDAA
Ga0255354_10387451	3300028087	Soil	LFDMPTPATTPTAAPNEPEDDTGFAEIDDDEPIEEVEELDDAA
Ga0255349_10111883	3300028090	Soil	PQKPASLFDMPAPAATPTVTPAETDEDPGFAEIDDDEEPGEFGELDDAA
Ga0302144_100986362	3300028560	Bog	KSASLFDMPPAPATTPTAAPAEPEDEPGFAEVDDDEPIEEVEELDDAA
Ga0302145_101327042	3300028565	Bog	PVKAAPQKSASLFDMPPAPATTPTAAPAEPEDDAGFAEIDDDEPIEEVEELDDAA
Ga0302147_100961253	3300028566	Bog	AKPVEPVKSAPQKSAGLFDMAPAPATTPTAALAEPEDDPGFAEVDDDEPIEEVEELDDAA
Ga0302202_104394211	3300028762	Bog	ATTTVTPAESDEDLGFAEIDDDEPIEEFEEMDDAA
Ga0302198_100381491	3300028765	Bog	TTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302198_101162342	3300028765	Bog	PTPAATPTAAPVEPEDDPGFAEIDDDEPIEEAEELDDAA
Ga0302201_100010671	3300028785	Bog	MPTPAATPTAAPVEPEDDPGFAEIDDDEPIEEAEELDDAA
Ga0302189_102947432	3300028788	Bog	TPTATPTTTPAEPEDDLGFVEIDDDEPIEQTEELDEAA
Ga0302189_103785582	3300028788	Bog	AKPTEPAKPAPQKPASLFDMPTPATTPTAAPAESDEDLGFAEIDDDEPIEEVEELDDAA
Ga0302157_100464391	3300028813	Bog	VKSAPQKSAGLFDMAPAPATTPTAALAEPEDDPGFAEVDDDEPIEEVEELDDAA
Ga0302268_10088086	3300028854	Bog	PASLFDMPTPAVTPTAAPAEPEDDPGFAEIDDDEPIEEIEELDDAA
Ga0302265_10205601	3300028859	Bog	VEPVKPAPQKSASLFDMPPAPATTPTAAPAEPEDEPGFAEVDDDEPIEEVEELDDAA
Ga0302199_10674492	3300028860	Bog	PATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302146_100573321	3300028867	Bog	SLFDMPTPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302197_100784533	3300028873	Bog	TPATTPTAAPAESDEDLGFAEIDDDEPIEEVEELDDAA
Ga0302155_100263841	3300028874	Bog	SAEPAKPAPQKPASLFDMPIPATTPTAAPAEPEDDPGFAEIDDDEPIDEVEELNDAA
Ga0302154_106285541	3300028882	Bog	QKPASLFDMPTPAATAIATPVEPEDDPGFAEIDDDEPIEELEELDDAA
Ga0302200_101814031	3300028909	Bog	TAKPAPQKPASLFDMPTPEATPTAAPAEAEDHPGFAEIDDDEPIDEVEELDDAA
Ga0311327_105970341	3300029883	Bog	KPAPQKLASLFDMPTPTATPTTTPAEPEDDLGFVEIDDDEPIEQTEELDEAA
Ga0311341_104968702	3300029908	Bog	DMPTPAATPTAAPAEPEDDPGFAEIDDDEPIEEAEELDDAA
Ga0311361_102615711	3300029911	Bog	PATTPTAAPAEPEDDAGFAEIDDDEPIEEVEELDDAA
Ga0311362_100345781	3300029913	Bog	TPATTPTAAQAEAEDDPGFAEIDDDEPIEEVEELDDAA
Ga0311358_101861111	3300029915	Bog	ATTPTAAPAELEDDPGFAEIDDDEPIEEVEELDDAA
Ga0311358_110636182	3300029915	Bog	AEPAKPAPQKPASLFDMPAPAATTIVTPAESDEDPGFAELNDEEPLEYPEELDDAA
Ga0302143_10062321	3300029918	Bog	APQKSASLFDMPPAKATTPTAAPAEPEDDPGFAEIDDDEPIEEIEELDDAA
Ga0311363_100672409	3300029922	Fen	TTPTAAQAEAEDDPGFAEIDDDEPIEEVEELDDAA
Ga0311363_101996781	3300029922	Fen	KPAPQKSASLFDMPPAPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDVA
Ga0311363_111930531	3300029922	Fen	PPAPATTPTAAPAEPEDDPGFAEINDDEPIEEVQELDDAA
Ga0311328_108835862	3300029939	Bog	PTATPTTTPAEPEDDLGFVEIDDDEPIEQTEELDEAA
Ga0311352_106856831	3300029944	Palsa	AKPAPQKPVSLFDMPTPGTTPTTALAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0311343_101649653	3300029953	Bog	APQKSASLFDVPPAPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDVA
Ga0311331_101368941	3300029954	Bog	MPPAPATTPAAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0311342_101745221	3300029955	Bog	KAAEPVKPAPQKPASLFDMPAPVATPTTAPAEPEDDPGFAEIDDDEPIEETEELDDAA
Ga0311342_104034411	3300029955	Bog	FDMPITATTPTTAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0311342_104154203	3300029955	Bog	PAPQKPASLFDMPTPMATTSVTPAESDEDPGFAEINDDDELEESEVLDDAA
Ga0311342_106746882	3300029955	Bog	KPAPQKPASLFDMPIPATTPTAAPAEPEDDPGFAEIDDDEPIDEVEELNDAA
Ga0302277_10137241	3300029982	Bog	ASLFDMPITATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302277_12134701	3300029982	Bog	TTPTAAPAESDEDLGFAEIDDDEPIEEVEELDDAA
Ga0302277_12233572	3300029982	Bog	FDMPTPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302188_101384382	3300029986	Bog	SPTAKSTEPSKPAPQKPASLFDMPAPAATTTVAPAESDEDPGFAEVDDDEPIEETEELDDVA
Ga0302188_102098891	3300029986	Bog	QKPASLFDMPTPATTPTAAQAEAEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302190_103112562	3300029988	Bog	PAAKPVEPVKSAPQKSAGLFDMPPAPATTPTAAPAEPEDDPGFAEIDDDEPIEEFEELDDAA
Ga0302276_101409141	3300029992	Bog	TPAATPTAAPVEPEDDPGFAEIDDDEPIEEAEELDDAA
Ga0302304_103626602	3300029993	Palsa	APQKSASLFDLPPAPATTPTAAPAEAEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302186_101619061	3300030004	Bog	ITATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302270_105244341	3300030011	Bog	TAAKPAEPVKPAPQKPASLFDMPTPMATTSVTPAESDEDPGFAEINDDDELEESEVLDDA
Ga0311344_100545437	3300030020	Bog	APATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDVA
Ga0311344_104743532	3300030020	Bog	PAPATTPTAAPAELEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302274_101294101	3300030041	Bog	GLFDMPPAPATTPTAAPAEPEDDPGFAEIDDDEPIEEFEELDDAA
Ga0302282_12294682	3300030045	Fen	PASLFDIPPAPATTPTVAPAEPEDDPGFAEIDDDVPIEEVEELDDAA
Ga0302191_103616012	3300030049	Bog	PATTPTAAPAEPEDEPGFAEVDDDEPIEEVEELDDAA
Ga0302195_100664132	3300030051	Bog	PAATPTAAPVEPEDDPGFAEIDDDEPIEEAEELDDAA
Ga0302195_104506112	3300030051	Bog	MPPAPATTPTTALAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302194_101268102	3300030506	Bog	TTPTAAPAELEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302185_100250794	3300030508	Bog	ATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302309_105173671	3300030687	Palsa	APQKSASLFDVPPAPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0311345_100496811	3300030688	Bog	TTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDVA
Ga0302307_104931182	3300031233	Palsa	PAEPAKPAPQKPASLFDMPTPAATPTAASAEAEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302318_100648923	3300031258	Bog	APQKSASLFDMPPAPATTPTAAPAEPEDEPGFAEVDDDEPIEEVEELDDAA
Ga0302140_101312721	3300031261	Bog	VKPAPQKSASLFDMPPAPATTPTAALAEPEDDPGFAEIDDDEPIEEVEELDDVA
Ga0302140_106560112	3300031261	Bog	PATTPTAAPAEPEDDPGFAEINDDEPIEEVQELDDAA
Ga0302320_1003161312	3300031524	Bog	MPAPAATATATPAESDEDPGFAEVDDDEPIEEAEELDDAA
Ga0302320_100637441	3300031524	Bog	FDMPPAPATTPTAAPAEPEDDPGFAEIDDDEPIEEVEELDDVA
Ga0302320_101254231	3300031524	Bog	PATTPTAAQAEAEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302320_103135611	3300031524	Bog	KPAPQKPASLFDMPITATTPTTAPAEPEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302320_121755471	3300031524	Bog	KPASLFDMPTPAATPTAAPVEPEDDPGFAEIDDDEPIEEIEELDEAA
Ga0302319_101273926	3300031788	Bog	DMPTPATTPTAAQAEAEDDPGFAEIDDDEPIEEVEELDDAA
Ga0302319_101909631	3300031788	Bog	AHQKPASLFDIPAPATTATVTPAESDEDLGFAEIDDDDESVESEELDEAA
Ga0302319_102463593	3300031788	Bog	AATPTAAPVEPEDDPGFAEIDDDEPIEEIEELDEAA
Ga0302319_103839692	3300031788	Bog	PTSKPTEPAKPAPQKPASLFDMPAPAATTTVTPAESDEDSGFAEIYDDDEPVESEELDDA
Ga0302319_106986102	3300031788	Bog	MPTPATTPTAAPAEPEDDPGFAEIDDDEPIEEIEELDDAA
Ga0302319_112139852	3300031788	Bog	PAPQKPASLFDVPTSAATPSAATAESEEDFGFAEIDDDEPIEQIEELDEAA
Ga0334804_110870_543_704	3300033818	Soil	AKPAQQKPPSLFDIPTAATNPITTPAEPEEDPGFAELNDDEPLEDPEELDDVA
Ga0371487_0445636_438_548	3300033982	Peat Soil	VATPTTAPAEPEDDPGFAEIDDDEPIEETEELDDAA
Ga0371488_0106500_1403_1525	3300033983	Peat Soil	MPALAATTTVTPVESDEDPGFAEIDDDEEPEEFEALDDAA
Ga0370494_024711_1359_1523	3300034130	Untreated Peat Soil	VKAAPQKSASLFDMPPAPATTPTAAPAEPEDDAGFAEIDDDEPIEEVEELDDAA
Ga0370492_0367844_351_473	3300034282	Untreated Peat Soil	MPITATTPTAAPAEPEDDPGFTEIDDDEPIEEVEELDDAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060521

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences