Metagenome / Metatranscriptome Family F060514

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060514
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	114 residues
Representative Sequence	MAAKKKPNPSASEANASTEAPASTDGTLVTTNGNNEDHGEDFEVEDLADGDFEVDLHDLGISAEDIQVMKRIDARLSERLHQAQQAQAGTSNAPVATRAKGKGHELTAEELEEQLNKLKE
Number of Associated Samples	76
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	56.82 %
% of genes from short scaffolds (< 2000 bps)	93.94 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (77.273 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (83.333 % of family members)
Environment Ontology (ENVO)	Unclassified (95.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (79.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.38% β-sheet: 0.00% Coil/Unstructured: 71.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF03732	Retrotrans_gag	2.27

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
All Organisms	root	All Organisms	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
cellular organisms	root	All Organisms → cellular organisms	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	19.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	19.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	18.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	18.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	18.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	18.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	9.09 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	7.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.27 %
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	9.09 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	7.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009973\|Ga0105136_103725	Not Available	800	Open in IMG/M
3300009981\|Ga0105133_103680	Not Available	917	Open in IMG/M
3300009989\|Ga0105131_128750	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	585	Open in IMG/M
3300009990\|Ga0105132_104240	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	986	Open in IMG/M
3300009992\|Ga0105120_1036401	Not Available	597	Open in IMG/M
3300009994\|Ga0105126_1035569	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	599	Open in IMG/M
3300009995\|Ga0105139_1016720	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1046	Open in IMG/M
3300009995\|Ga0105139_1021019	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	976	Open in IMG/M
3300009995\|Ga0105139_1025773	Not Available	915	Open in IMG/M
3300009995\|Ga0105139_1031429	Not Available	858	Open in IMG/M
3300009995\|Ga0105139_1032324	Not Available	850	Open in IMG/M
3300009995\|Ga0105139_1087969	Not Available	590	Open in IMG/M
3300009995\|Ga0105139_1101001	Not Available	555	Open in IMG/M
3300010396\|Ga0134126_12292771	Not Available	588	Open in IMG/M
3300010399\|Ga0134127_13704077	Not Available	502	Open in IMG/M
3300010401\|Ga0134121_12561631	Not Available	553	Open in IMG/M
3300010403\|Ga0134123_11568601	Not Available	705	Open in IMG/M
3300014968\|Ga0157379_11349734	Not Available	690	Open in IMG/M
3300015270\|Ga0182183_1009667	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	977	Open in IMG/M
3300015273\|Ga0182102_1040112	Not Available	527	Open in IMG/M
3300015273\|Ga0182102_1044410	Not Available	512	Open in IMG/M
3300015280\|Ga0182100_1055175	Not Available	619	Open in IMG/M
3300015290\|Ga0182105_1004922	Not Available	1291	Open in IMG/M
3300015290\|Ga0182105_1040945	Not Available	702	Open in IMG/M
3300015293\|Ga0182103_1067887	Not Available	581	Open in IMG/M
3300015306\|Ga0182180_1056074	Not Available	608	Open in IMG/M
3300015306\|Ga0182180_1076231	Not Available	544	Open in IMG/M
3300015310\|Ga0182162_1021939	Not Available	924	Open in IMG/M
3300015310\|Ga0182162_1032599	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	817	Open in IMG/M
3300015310\|Ga0182162_1118501	Not Available	521	Open in IMG/M
3300015310\|Ga0182162_1123246	Not Available	513	Open in IMG/M
3300015311\|Ga0182182_1063373	Not Available	637	Open in IMG/M
3300015312\|Ga0182168_1041166	Not Available	783	Open in IMG/M
3300015315\|Ga0182120_1034130	Not Available	840	Open in IMG/M
3300015316\|Ga0182121_1053445	Not Available	747	Open in IMG/M
3300015317\|Ga0182136_1138265	Not Available	507	Open in IMG/M
3300015318\|Ga0182181_1107259	Not Available	517	Open in IMG/M
3300015319\|Ga0182130_1023838	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	911	Open in IMG/M
3300015319\|Ga0182130_1134310	Not Available	507	Open in IMG/M
3300015320\|Ga0182165_1015088	Not Available	1119	Open in IMG/M
3300015320\|Ga0182165_1046317	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	778	Open in IMG/M
3300015324\|Ga0182134_1086799	Not Available	620	Open in IMG/M
3300015324\|Ga0182134_1092658	Not Available	605	Open in IMG/M
3300015325\|Ga0182148_1053868	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	726	Open in IMG/M
3300015325\|Ga0182148_1063767	Not Available	685	Open in IMG/M
3300015325\|Ga0182148_1100658	Not Available	581	Open in IMG/M
3300015326\|Ga0182166_1051260	Not Available	736	Open in IMG/M
3300015327\|Ga0182114_1131224	Not Available	550	Open in IMG/M
3300015329\|Ga0182135_1069447	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	686	Open in IMG/M
3300015329\|Ga0182135_1069646	Not Available	686	Open in IMG/M
3300015329\|Ga0182135_1091529	Not Available	620	Open in IMG/M
3300015329\|Ga0182135_1099634	Not Available	600	Open in IMG/M
3300015330\|Ga0182152_1133494	Not Available	534	Open in IMG/M
3300015331\|Ga0182131_1130540	Not Available	541	Open in IMG/M
3300015333\|Ga0182147_1028413	Not Available	980	Open in IMG/M
3300015333\|Ga0182147_1120194	Not Available	581	Open in IMG/M
3300015334\|Ga0182132_1068726	Not Available	725	Open in IMG/M
3300015334\|Ga0182132_1130759	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	562	Open in IMG/M
3300015334\|Ga0182132_1158677	Not Available	517	Open in IMG/M
3300015335\|Ga0182116_1075039	Not Available	726	Open in IMG/M
3300015335\|Ga0182116_1124169	Not Available	592	Open in IMG/M
3300015336\|Ga0182150_1037718	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	875	Open in IMG/M
3300015336\|Ga0182150_1087298	Not Available	651	Open in IMG/M
3300015336\|Ga0182150_1137149	Not Available	545	Open in IMG/M
3300015339\|Ga0182149_1023050	Not Available	1065	Open in IMG/M
3300015339\|Ga0182149_1086698	Not Available	670	Open in IMG/M
3300015339\|Ga0182149_1154459	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	529	Open in IMG/M
3300015348\|Ga0182115_1093684	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	938	Open in IMG/M
3300015348\|Ga0182115_1194414	Not Available	650	Open in IMG/M
3300015348\|Ga0182115_1212982	Not Available	618	Open in IMG/M
3300015348\|Ga0182115_1226808	Not Available	596	Open in IMG/M
3300015348\|Ga0182115_1246253	Not Available	569	Open in IMG/M
3300015348\|Ga0182115_1248138	Not Available	566	Open in IMG/M
3300015349\|Ga0182185_1047508	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	1119	Open in IMG/M
3300015349\|Ga0182185_1109635	Not Available	799	Open in IMG/M
3300015349\|Ga0182185_1143309	Not Available	708	Open in IMG/M
3300015349\|Ga0182185_1200165	Not Available	604	Open in IMG/M
3300015350\|Ga0182163_1014580	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1800	Open in IMG/M
3300015350\|Ga0182163_1051998	Not Available	1159	Open in IMG/M
3300015350\|Ga0182163_1066441	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1050	Open in IMG/M
3300015350\|Ga0182163_1135977	Not Available	760	Open in IMG/M
3300015350\|Ga0182163_1138929	Not Available	753	Open in IMG/M
3300015350\|Ga0182163_1179795	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	661	Open in IMG/M
3300015350\|Ga0182163_1187301	Not Available	648	Open in IMG/M
3300015350\|Ga0182163_1211560	Not Available	608	Open in IMG/M
3300015352\|Ga0182169_1030157	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1516	Open in IMG/M
3300015352\|Ga0182169_1080037	Not Available	1027	Open in IMG/M
3300015353\|Ga0182179_1124851	Not Available	787	Open in IMG/M
3300015353\|Ga0182179_1133645	Not Available	764	Open in IMG/M
3300015353\|Ga0182179_1180833	Not Available	666	Open in IMG/M
3300015354\|Ga0182167_1167369	Not Available	810	Open in IMG/M
3300017412\|Ga0182199_1108097	Not Available	646	Open in IMG/M
3300017414\|Ga0182195_1178942	Not Available	549	Open in IMG/M
3300017432\|Ga0182196_1067469	Not Available	673	Open in IMG/M
3300017432\|Ga0182196_1154092	Not Available	505	Open in IMG/M
3300017435\|Ga0182194_1095771	Not Available	602	Open in IMG/M
3300017439\|Ga0182200_1021496	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	993	Open in IMG/M
3300017439\|Ga0182200_1087915	Not Available	627	Open in IMG/M
3300017439\|Ga0182200_1150473	Not Available	519	Open in IMG/M
3300017440\|Ga0182214_1093430	Not Available	636	Open in IMG/M
3300017445\|Ga0182198_1020079	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	1142	Open in IMG/M
3300017445\|Ga0182198_1083634	Not Available	706	Open in IMG/M
3300017447\|Ga0182215_1121078	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	592	Open in IMG/M
3300017693\|Ga0182216_1069488	Not Available	796	Open in IMG/M
3300026035\|Ga0207703_11441331	Not Available	662	Open in IMG/M
3300028050\|Ga0268328_1036552	Not Available	643	Open in IMG/M
3300028064\|Ga0268340_1056940	Not Available	589	Open in IMG/M
3300028143\|Ga0268348_1012522	Not Available	633	Open in IMG/M
3300032464\|Ga0214492_1056656	Not Available	759	Open in IMG/M
3300032467\|Ga0214488_1003547	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	2356	Open in IMG/M
3300032467\|Ga0214488_1099800	Not Available	630	Open in IMG/M
3300032467\|Ga0214488_1133595	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	520	Open in IMG/M
3300032469\|Ga0214491_1044829	Not Available	1058	Open in IMG/M
3300032551\|Ga0321339_1004821	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	2164	Open in IMG/M
3300032591\|Ga0214484_1123728	Not Available	519	Open in IMG/M
3300032592\|Ga0214504_1063921	Not Available	721	Open in IMG/M
3300032593\|Ga0321338_1323657	Not Available	552	Open in IMG/M
3300032625\|Ga0214501_1243163	Not Available	570	Open in IMG/M
3300032689\|Ga0214497_1102376	Not Available	620	Open in IMG/M
3300032697\|Ga0214499_1224843	Not Available	580	Open in IMG/M
3300032758\|Ga0314746_1012204	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1691	Open in IMG/M
3300032792\|Ga0314744_1001298	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	3097	Open in IMG/M
3300032792\|Ga0314744_1061654	Not Available	730	Open in IMG/M
3300032844\|Ga0314743_1074411	Not Available	791	Open in IMG/M
3300032889\|Ga0314751_1123065	Not Available	518	Open in IMG/M
3300032916\|Ga0314734_1033240	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1025	Open in IMG/M
3300032966\|Ga0314722_1001087	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	2594	Open in IMG/M
3300033535\|Ga0314759_1093380	Not Available	940	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	96.97%
Environmental	Environmental	3.03%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	96.97%
Terrestrial	Environmental → Terrestrial	3.03%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	85.61%
Unclassified	Host-Associated → Plants → Unclassified	9.85%
Soil	Environmental → Terrestrial → Soil	3.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	85.61%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	9.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	85.61%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	9.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	83.33%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	9.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.03%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009973	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_222 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009990	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015273	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300032464	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032467	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032469	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032551	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032591	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032592	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032593	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032625	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032689	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032697	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032758	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032792	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032844	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032889	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032913	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032916	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032966	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033535	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105136_1037251	3300009973	Switchgrass Associated	MAAKKKPNPSASEANALTEAQPSNNIIVPINADNNHDHDEDLEVEDLADGGLEVDLHDLGISAEDIQAMKRIDACLAERQLQAQQTQAGTSNAAAATAKGKGH*
Ga0105133_1036801	3300009981	Switchgrass Associated	MAAKKKPNPSASEANTSTEAPPSTDNALVPTNGNNNTEDHGEDFEVEDLADGDLEVDLHDLGITAEDIQVMKRIDTRLSERLRQTQQAQAGTSTEPAATRAKGKGQELTAEELEEQLNKLKEQELRYK
Ga0105131_1287501	3300009989	Switchgrass Associated	MAAKKKPNPSAPEANASTEAPPSTNNTLVLTNNNNNEDHADHAEDFEVEDLADGDLKVDLHDLGISTEDIRAMKRIDTRLSECLRKTQQAQAGPSTMPAATRAKGKGHELTAEELEERLNKLKEQELCYKAMRQSI*
Ga0105132_1042401	3300009990	Switchgrass Associated	MAMKKKSNPSASEANASAEAPPSTDNALVPTNNDNNEDQGEDLEVEDLADGEFEVDLHDLGISVEDILAMKRIDARLTERLRHAQQAQPGTSNAPVATRSKGKEHELTAEELEEQLNK*
Ga0105120_10364012	3300009992	Switchgrass Associated	MAAKRKSNPGASKANASAEVPPSTDNALVPKNNNEDQAEDHEVEDLADGEFEVDLHNLFIPAEDILAMKRIDARLTERLRHAQQAQAGTSNAPVATRSKGKGHELTAEELEEQLNKLRRRASLQGNAAVHPRS
Ga0105126_10355691	3300009994	Switchgrass Associated	MAAKKKPDPGVSEANASTEALPSTDNALVPANNDNEDQGEDLEVEDLADGEFEVDLHDLSISAEDILAMKRIDAHLPERLHNVQQAQSGPSNAPVTTRSKGKGR*
Ga0105139_10167201	3300009995	Switchgrass Associated	PNPSASEANTSTEAPPSTDNTLVPSNGNTTIDDHDEDLEVVDLTDGNFAVDLHDLGISADDIQVMKRTDTRLSECLRQTQQAQAGPSTAPAATIAKGKGHELTAEELEEQLNKLKEQELHYKAMRQSLRDR*
Ga0105139_10210192	3300009995	Switchgrass Associated	MAAKKKPNTGTSEEVNASTEAPSLTNDALVTTNNDNKEDQGEDLEVEDLTEGEFEVELHDLGISAEDFQVTKRIDARLTERLRHAQQAQAGTSNASVATRSKGKGRSSPRKSWSNSTS*
Ga0105139_10257731	3300009995	Switchgrass Associated	MAAKKKPNPGASEANASTEAPPSTDNALVPANNDNEDQGEELEVEDLADGEFEVDLHDLGISAEDILAMKSIDARLTEHLRNMQQAQAGPSNAPVTTRSKGKGR*
Ga0105139_10314291	3300009995	Switchgrass Associated	MAAKRKPNPGASKANASAEVPPSTDNALVPTNNNEDQGEHHEVEDLADGEFEVDLHNLFIPAEDILAMKRIDARLTERLRHAQQAQAGTSNAPVATRSKGKGHELTAEELEEQLNKLRRRASLQGNAAVHPRSPDNDEASSPSP*
Ga0105139_10323242	3300009995	Switchgrass Associated	ASEANASTKAPPLTINTLVLTNNNNEDHADHAEDFEVEDLADGDLEVDLHDLGISAEDIRAMKRIDERLSGRLHQAQQAQAGTSNAPAATRAKGKG*
Ga0105139_10879692	3300009995	Switchgrass Associated	MAAKKKPNPSTLEANASTDAIPTNDNTLDNTNGDNTEDNGEDLGAEDLADGDFEVGLHDLSISTEDIQTMRRIDTRLSGHLRKVQAQQTQANTSNAVATRAKGKCQELTAEELEVQLNKLKE*
Ga0105139_11010011	3300009995	Switchgrass Associated	MAAKKKPNPGASNANASVEAPPSTNNALVPANNGNEDQDEDLEVDLTDGEFVIDLHDLGISAEDILAMKRIDARLTERLRNVQQAQAGPSNAPVTTRSKGKGRQLTVEELEE*
Ga0134126_122927711	3300010396	Terrestrial Soil	MAAKKKPNTGTSEEVNASSEAPSSTNDALVTTNNDNKEDQGEDLEVEDLTEGEFEVELHDLGISAEDFQVTKRIDARLTECLRHAQQAQAGTSNMPVATRSKGKGRELTAQELEEQLNKLREEVLRCKAL*
Ga0134127_137040771	3300010399	Terrestrial Soil	MAAKKKPSPSASEANASTEAQPSNNIIVPTNTDNNDGHGEDLKVEDLADGGLEVDLHDLGISAEDIQAMKRIDERLAERQLQAQQAQTG
Ga0134121_125616311	3300010401	Terrestrial Soil	MAAKKKPNPSDSEANASTEAQPSNNIIVPTNAENNDDHGEDLEVEDLADGGLEVDLHDLAISVEDIRAMKRIDACLAERQHQAQQAQAGT
Ga0134123_115686011	3300010403	Terrestrial Soil	MAVKKKPNTGASEANASTEVPPSTNDALVVTNNGNNEDQGKDFEVKDLANGDFEVNLHDLGISAEDIQVMKRIDARLSERLHHAQQAQAGTSNAPVATRAKGKGHELTVQELEE
Ga0157379_113497341	3300014968	Switchgrass Rhizosphere	MAAKKKPNPSASEANASTEAQPSNNIIVPINADNNRDHDEDLEVEDLADGGLEVDLHDLGISAEDIQAMKRIAARLAERELQAQQAQAGTSNAAASIAKGKGHQLSAEELE
Ga0182183_10096672	3300015270	Switchgrass Phyllosphere	MVAKKKPNPSASEANTSIEAQPSNNIIVPTHADNNDDHGEDLEVKDLADRGLEVDLHDLGISVEDIQAMKRIDARLAERQLQAQQAQAGTSNAAAATAK*
Ga0182102_10401122	3300015273	Switchgrass Phyllosphere	MAAKKKPNPSDSEANASTEAQPSNNIIVPTNADNNDDHGEDLEVEDLADGGLEVDLHDLGISVEDIQAMKRIGARLAERQLQAQQAQAGTSNAAAATAK*
Ga0182102_10444101	3300015273	Switchgrass Phyllosphere	PGASEANSSAEAPPSTNNTLVTTNNDNNNEEQGEDFEVEDLANGDFEVDLHDLGISTENIQVMKRIDVHLSERLRHAQQAQAGMSNAPVPTRAKGKGHTSSPRKSSRNI*
Ga0182100_10551751	3300015280	Switchgrass Phyllosphere	MAAKKKPTPSASEANASTEAQPSNNIIVPINVDNNHDHGEDLEVEDLADGGLEVDLHDLGISIEDIQAMKRIDACLAERQLQAQQAQAGTSNTVAATAKGKGHQLSAEDL
Ga0182105_10049222	3300015290	Switchgrass Phyllosphere	MAAKKKPNPSASEANASTEAQPSNNIIVPTNADDDHGEDLEVEDLADGGLEVDLHDLGISAEDIQAMKRIAARLAERELQAQQAQAGTSNAAAATAKGKGHQLSAEE*
Ga0182105_10409451	3300015290	Switchgrass Phyllosphere	VAAKKKPNPGASEANASTEALPSNNNIIVATNGDNNEDHGEDLEVEDLADGGLEVDLHDLGISVEDIRAMKRINACLAERQHQA*
Ga0182103_10678872	3300015293	Switchgrass Phyllosphere	MAAKKKPNPSASEANASTETTPSTDNALVPSNGNTIDDHDEDLEVKDLADGNFEVDLHDLGISAEDIQVMKRIDTRLSECLRKTQQAQAGPSTMSAATRAK
Ga0182180_10560741	3300015306	Switchgrass Phyllosphere	LSAPEANASTEAPPSTDNALVPSNGNSTIDDHDEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTHLSECLRQTQQAQASPSTAPAATRAKGKGQELTAEELEEQLNKLKEQELRYKAMRQSLRDRLIMMKPIRQDPRPVQ*
Ga0182180_10762311	3300015306	Switchgrass Phyllosphere	MAAKKKPNPGALEANASTEAPPSTDNALVPANNDNKDQGEDLEVEDLADGEFEVDLHDLGISAEDILAMKRIDARVTERLRHVQQAKAGPSNVPMTTRLKGKGRQLTAKEL
Ga0182162_10219391	3300015310	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEALPSNNNFIVATNGDNNDHDEDLEVEDLTDGGLEVDLHDLAISVEDIRAMKRIDACLAERQHQAQQAQAGTSNAPAPAGAKGKRHQLSAEELEDQLNKLKEQELRCKAMRQAI
Ga0182162_10325991	3300015310	Switchgrass Phyllosphere	MAAKKKPNPGASEEANASTEAPPSTNDALVTTNNDNEDQVENIEIEDLTEGKFEVNLHNLGITAEDIQALKRIDARLIEQLRHAQQAQAGTSNAPVATRSKGKGRELTAQELEEQLNKLREEELRC*
Ga0182162_11185011	3300015310	Switchgrass Phyllosphere	MAAKKKPSTGASEEANASTEAPPSTNDALVMTNNDNNEDQGKDLEVEDLTEGDFKVELYDLGISAEDIQVMKRIDARLTERLHHAQQAQAGTSNAPVATRSKGKGRELIVKELEEKLNKLREEELRCKAM
Ga0182162_11232461	3300015310	Switchgrass Phyllosphere	MAMKKKPNPGASEANALAEALPSADNALVPTNNDNNEDQGEDLEVEDLADGEFEVDLHDLGISAEDILAMKRIDTRLTERLRNTHQAQAGTSNAPVATRSKGKGHELTAEE
Ga0182182_10633731	3300015311	Switchgrass Phyllosphere	MALKKKPNPGASEANASTEALPSNNNIIVATNGGNNDHGEDLEVEDLTDGGLEVDLHDLGISADDIQAMKRIDACLAERLHQAQQAQAGTSNAPAPAGAKGKRHQLSAEELEDQLNKLKEQEL
Ga0182168_10411661	3300015312	Switchgrass Phyllosphere	MAAKKKPNIGTSEEANASTGAPPSTNNALVTTNNDNNKDQGEDLEVEDLAKGDFEVELHDLGISAEDIQVMKRIDARLSERLHHAQQAQAGTSNTPVATRA
Ga0182120_10341301	3300015315	Switchgrass Phyllosphere	MAAKKKPNPGTSEANASTDALPTNDNTLDTTNGDNTKDNGEDVSVEDLADGYFEVDLHDLGISAEDIQTMRRIDTHLSERLRQVQQAQQTQANTSNAVATRAKGKVQELTAEELEVQLNKLKE*
Ga0182121_10534452	3300015316	Switchgrass Phyllosphere	MAAKKKPNPSASKANASVEAPPSTDNALVPANNGNEDQDEDLEVDLADGEFEVDLHDLGISAEDILAMKRIDARLTEHLRNMQRAQAGPSNAPVTTRSKGKGRQLTAEALEEQLNKLKEEEFRCKAMR*
Ga0182136_11382651	3300015317	Switchgrass Phyllosphere	MAAKKKPNPSASEANASTEAPPSTDNALVPSNGNNTIADHDEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTRLSECIRQSQQAQAGPS
Ga0182181_11072591	3300015318	Switchgrass Phyllosphere	MTAKKKPNPSASEANASTEARPSNNIIVPINTSNNHDHGEDLEVEDLAGGGLKVDLHDLGISVEDIQAMKRIDACLAERQLQAQQAQTGTSNVAAATKKGKGHQLSAKELEEQLN
Ga0182130_10238381	3300015319	Switchgrass Phyllosphere	MPGKKKPNPGTSEANASTEAPPSTDNALVPANNDNEDRGQDLEVEDLPDGEFEVDLHDLGISAEDILAMKRIDAWLTEHLRNVQQAQAGPSNAPVTTRSKGKGR*
Ga0182130_11343101	3300015319	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEAPPSTDNALITTNNDNNEGHGEDLEVKDLADGDFEVDLHDLGISTKDIQVMKRIDARLSDHLRQAQQAQAGTSNASMATRTKGKGHELTTKELEE
Ga0182165_10150882	3300015320	Switchgrass Phyllosphere	MAAKKKPNPSASEANASTEAQPSNNIIVPINADNNRDHGEDLEVKDLTDGGLEVDLHDLGISVEDIQAMKRIDARLTERQLQAQQAQAGKSNAAAATAKGKGHQLSAEGMEDQLNKLREQELRCKAM
Ga0182165_10463171	3300015320	Switchgrass Phyllosphere	MAAKKKPNTGTSEANASTEAPPSTDNTLVTTNGNNNNTEDHGEDFEAEDIADRDFEGDLHDLGISIEDIRVMRRIDARLSERFRQAQQAQAGTSNAPATTRAKGKGQELTTE
Ga0182134_10867992	3300015324	Switchgrass Phyllosphere	MAMKKKPNPGASEANASAEAPPSTDNALVPTNNDNNEDQGEDLEVEDLVDGEFEVDLHDLGISAADILSMKRIDTCLTERLRNAQQAQAGTSNAPM
Ga0182134_10926581	3300015324	Switchgrass Phyllosphere	MAAKKKPNPSASEANASTEAQPSNNIIVPTNADDDHDEDLEVEDLADGGLEVDLHDLGISVEYIQVMKRIDARLAERQLQAQQAQAGTSNAAAATAK*
Ga0182148_10538681	3300015325	Switchgrass Phyllosphere	MAAKKKPNPGTLEANASTEAPPSTDNTLVTTNGNDNNTEDHGEDFEAEDLADGDFEVDLHDLGISVEDIRVMRRIDARLSERLRQAQQAQAGTSN
Ga0182148_10637671	3300015325	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEAPPSTDNALVPANNDNEDRGQDLEVEDLADGEFEVDLHDLGISAEDILSMKRIDARLTEHLLNMQQSQAGPSNAPVTTRLKGKGR*
Ga0182148_11006582	3300015325	Switchgrass Phyllosphere	MAAKKKPNPRALEANASTEAPPSTDNALVTTGNDNKDHGEDLEVEDLADGGLEVDLHDLGISAEDIRAMKRIDERLSGRLHQAQQAQAGTSNAPAATRAKGKGQELTAEELEEQLNKLKEEELRCKAMRQ
Ga0182166_10512601	3300015326	Switchgrass Phyllosphere	MAVKKKPNPGASEANASTEAPPSKIAALITTNNDNNEDQDEDIEVEDLAEGEFEVDLHDFRITTEDIQAMKRIDARLIERLRHVQQAQAGTSNAPMTTRSKGKGWELTTQELEEQLNKLKEEELR
Ga0182114_11312241	3300015327	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEAPPSTDNALVPANNDNEDQGEELEVEDLADGEFEVDLHDLGISAEDILAMKRIDARLPECLRNVQQAQSGPSNAPVTT
Ga0182135_10694472	3300015329	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEAPPSTDNALVPANNDNEDRGQDLEVEDLADGEFEVDLHDLGISAEDILAMKRIDAWLTEHLRNVQQAQSGPSNAPVTTRS
Ga0182135_10696461	3300015329	Switchgrass Phyllosphere	MAAKKKPNPGTSEANASTDALPTNDNTLDTTNGDNTKDNGEDVDVEDLADGDFKVDLHDLGISTEDIQTMRRIENRLSERLRQVQQAQQTQANTSNAVATRVKGKGQELTAEELEVQL
Ga0182135_10915291	3300015329	Switchgrass Phyllosphere	MAAKKKPNPSASEPNALTEAPPSTDNALVPSNGNNTIADHDEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTRLSECLHQTQQAQAGPSTAPAATIAKGKGHELTAEELEEQLNMLKEQELHYKAMR*
Ga0182135_10996341	3300015329	Switchgrass Phyllosphere	MAVKKKPNPGASEANASTEAPPSKIAALITTNNDNNEDQDEDIEVEDLAEGEFEVDLHDLGIATEDIQALKRIDARLVERLRHAQQAQAGTSNVPVATRSKG
Ga0182152_11334941	3300015330	Switchgrass Phyllosphere	MAVKKKPNPGASETNASTDNALVPANNDNEDQDEDLEVEDLADGEFEVDLHDLGISAEDILAMKRIDARLTEHLRNMQQTQAGPSNAPVTTRSKGKGRQLTTEELEEQLNKLKEEEFRCKAMRQAI
Ga0182131_11305401	3300015331	Switchgrass Phyllosphere	MAAKKKPNPSASEANASTEAQPSNNIIVPINADNNHGHGEDLEVEDLTDGGLEVDLHDLGISVEDIQAMKRIDARLAERQLQAQQAQAGTSNAVAATAKGKGHQLSAEEFEEQLNKLKE
Ga0182147_10284132	3300015333	Switchgrass Phyllosphere	MAAKKKPNPSDSEANASTEAQPSNNIIVPTNAENNDDHGEDLEVEDLADGGLEVDLHDLGISVEDFQAMKRIDARLAKRQLQAQQAQAGTSNAASATAK*
Ga0182147_11201941	3300015333	Switchgrass Phyllosphere	MAAKKKPNPGASEANTSTEALPSYNNTIVTTNSDNIDDHGEDLEVEDLADGGLEVDLHNLGISAEDIRAMKRIDACLSEHLHQVQQAQGGTSNAPAAAGAKGKGLQLSAEEMEEQLNKLKEQELRCKA
Ga0182132_10687262	3300015334	Switchgrass Phyllosphere	MAAKKKPNLGASEANALAEAPPSTDNALVPTNNDNNEDQGKDLEVEDLADGDFEVDLHDLGISVEDILAMKRIDTRLTGHLRHAQQAQAGTSNAPVATRSKGKGHELTAEELEEQLTR*
Ga0182132_11307591	3300015334	Switchgrass Phyllosphere	MAAKKKPNTGASEEANASTEARPLTNNALVTTNNDNNDEDQGKDIEVEDLVEGAFEVDLQDLGITTEDIQAMKRIDARLAERLRHAQQAQAGTSNVPMTTRSKCKGQELTA*
Ga0182132_11586771	3300015334	Switchgrass Phyllosphere	NASTEAPLSTDNALVPSNGNNTTEDHGEDIEVEDLADGDFEVDLHDLGITAEDIRAMKIIDAHLGDRLCQTQQAQVGTSTAPAATRAKGKGQELTTEELDEQLNKLKEQELRYKAMRQALCDRLIMMKPLRQEPRPVQ*
Ga0182116_10750391	3300015335	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEAPPSTDNALVPANNDNEDQGEELEVEDLADGEFEVDLHDLGISAEDILAMKRIDARLTEHLRNMQQAQAGPSNAPVTTRSKGKGR*
Ga0182116_11241691	3300015335	Switchgrass Phyllosphere	MEAKKKPNLSAPEANASTEAPPSTDNALVLSNGNTTIDDHNEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTRLSECLRQTQQAQAGPSTAPAATRAKGKGHELTAEELEEQLNKLKEQELHYKAMR*
Ga0182150_10377181	3300015336	Switchgrass Phyllosphere	MEAKKKPNPSAPEANTSTEAPPSTDNTLVPSNGNTTIDDHDEDLEVKDLADGNFEVDLHDLGISAEDIQVMKRIDTRLSECLRQTQQAQAGPSTAPAATRAKGKGHELTAEELEEQLNKLKEQELHYKAMR*
Ga0182150_10872982	3300015336	Switchgrass Phyllosphere	MAAKKKPNPGASEANALAEAPPSTNNALVPTNNDNNEDQGKDLEVEDLADGEFEVDPHDLGITVEDILAMKRIDTCLTGSLRHAQQAQAGTSNAPVATRSKGKGHELTAEELEEQLNK*
Ga0182150_11371491	3300015336	Switchgrass Phyllosphere	MAAKKKPNIGTSEEANASTGAPPSTNDALVTTNNDNNKDQGEDLEVEDLAKGDFEVELHDLGISAEDIQVMKRIDARLSKRLRHAQQAQAGTSNAPVATRAKGMSSLCKSSRTNLTS*
Ga0182150_11624171	3300015336	Switchgrass Phyllosphere	MIAKKKPNPGTSEANASTEALPTNDNTLDTTNGDNTEDNGEDLGVEDLADGDFEVDLHYLGISAEDIQTMRRIDAHLSERLRQTQQAQQTQANTSNV
Ga0182149_10230501	3300015339	Switchgrass Phyllosphere	MAAKKKPNPGASEANVSTEAPASTENTRVTMNGDNNKDHSEDFEVEDLADRDFKVKLHDLGISTEDIQVMKRIDARLSERLRQAQQAQAGTSNALVATRTKGKG
Ga0182149_10866982	3300015339	Switchgrass Phyllosphere	MAAKRKPNLGASKANTSAEVPPSTDNTLVPTNNNEDQGEDHEIEDLTDGEFEVDLHNLGISAEDILAMKRIDARLTERLRHAQQAQAGTSNAPVATRSKGKGHELTTEELEEQPTS*
Ga0182149_11544591	3300015339	Switchgrass Phyllosphere	MAAKKKPNPDASEANASTEARPWTDNALVPTNGNNNTEDHGEDFEVEDLADGDFEVDLHDLGITAEDIRAMKIIDAHLGDRLCQTQQAQVGTSTAPAATRAKGKGQELTAEELDEQLNKLKEQELRYKAMRQALC
Ga0182115_10936841	3300015348	Switchgrass Phyllosphere	MAAKKKLNPSAPEANASTEAPPSTDNALVPSNGNNTIDDHDEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTHLSECLRQTQQAQAGPSTAPAATRAKGKGHELTAEELEEQLNMLKEQELHYKAM*
Ga0182115_11944141	3300015348	Switchgrass Phyllosphere	HDHMAAKKKPNPNASEANASTEAPPLTINTLVLTNNNNEDHADHAEDFEVEDLANEDLEVDLHDLGISAEDIRAMKRIDERLSGRLHQAQQAQAGTSNAPAATRAKGKG*
Ga0182115_12129821	3300015348	Switchgrass Phyllosphere	MAAKRKPNPGASKANASAEVPPSTDNALVPTNNNEDQGEDHEIEDLTDGKFEVDLHNLGISAEDILAMKRIDARLTERLRHAQQAQPGTSNAPVATRSKGK*
Ga0182115_12268081	3300015348	Switchgrass Phyllosphere	MAAKKKPNPSALEANASTEAQPSNNIIVPTNADDDHGEDLEVEDLADGGLEVDLHDLGISVEDIQAMKRIDARLAERQLQAQQAQAGTSNAVAATAKGKGHQLSAEELEEQLNKLKEQELRCK
Ga0182115_12462531	3300015348	Switchgrass Phyllosphere	MAAKRKPNPGASKANASAEVPPSTDNALVPTNNNEDQAEDHEVEDLADGEFEVDLHDLGIPAEDILAMKRIDTCLTERLRHAQQAQAGTSNAPVATRSKEKGHELTAKELEEQLNKLKEEELRC*
Ga0182115_12481381	3300015348	Switchgrass Phyllosphere	MAVKKKPNPGASEANASAEATPSTDNALVPTNNDNNKIQGEDLEVEDLADGEFEVDLHDLGISAEDILAMKRIDVRLTERLRNTHQAQAVTSNAPVATRSQGKGHELTAEELEEQLNKL*
Ga0182185_10475081	3300015349	Switchgrass Phyllosphere	MAAKKKPNTGASEANASTEAPPSTNNALVATNNDNNNEDQGKDFEVEDLTDGDFEVDLHDLGISAEDIQVMKRIDARLSERLHHAQQAQAGTSNAPVATRAKGKGHELTAQEL*
Ga0182185_11096351	3300015349	Switchgrass Phyllosphere	MAAKKKPNPSASEANASTEAPPSIDNALITTNNDNNEGHGEDLEVEDLADGDFEVDLHDLGISAEDIQVMKRIDARLSERLCHAQKAQAGTSNAPVSTRSKGKGHELTAE
Ga0182185_11433091	3300015349	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEAPPSTDNALVPANNGNEDQDEDLEVDLADGEFEVDLHDLGISAEDILAMKRIDARLTERLRNVQQAQAGPSNAQVTTRSKGKGRQ
Ga0182185_12001651	3300015349	Switchgrass Phyllosphere	MAAKRKPNPGASEANASAEVPPSTDNALVPTNNNEDQGEDNEIEDLTDGEFEVDLHDLGFPAEDIQTMKRIDAHFTERLRHSQQAQAATSNAPTTTRSKGK
Ga0182163_10145801	3300015350	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEAPPSTDNALVPANNDNEDQGEELEVEDLTDGEFEVDLHDLGISAEDILAMKRIDARLTEHLRNMQQAQAGPSNAPVTTRSKGKCR*
Ga0182163_10519982	3300015350	Switchgrass Phyllosphere	MAAKRKPNLGASKANASAEVPPSTDNALVPKNNNEDQAEDLADGEFEVDLHDLGIPAEDILAMKRIDACLTEHLRHAQQAQAGTSNAPVATRSKGK*
Ga0182163_10664411	3300015350	Switchgrass Phyllosphere	MAAKKKPNPSASEPNASTEAPPSTDNALVPSNGNNTIADHDEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTRLSECLRQTQQAQAGPSTAPSATRAKGKGHELTAEELEEQLNMLKEQELHYKAM*
Ga0182163_11359772	3300015350	Switchgrass Phyllosphere	MAAKKKPNPSASEANASTEAQPSNNIIVPTNADDDHGEDLEVEDLTDGGLEVDLHDLGISAEDIQAMKRIDARLAERQLHLQQAQAGTSNAAAATAKGKGHQLSAEE*
Ga0182163_11389291	3300015350	Switchgrass Phyllosphere	MAAKKKPNPSASESNASTKAPPSTDKSLVPSNGNNTIDDHDEDLEVEDLADGNFEVDLHDIGISAEDIQVMKRIYTRLSECLRQTQQAQAGPSTAPAATRAKGKGHELTAEELVEQLNKLKEQELHYKAMQQS
Ga0182163_11797951	3300015350	Switchgrass Phyllosphere	ASEEANASTKARPLTNNALITTNNDNNDEDQGKDIEVEDLAKGAFEVDLQDLGITTEDIQAMKRIDARLAERLRHAQQAQAGTSNVPMTTRSKCKGQELTAQELEE*
Ga0182163_11873011	3300015350	Switchgrass Phyllosphere	MAAKKKPNPGASEANVSTEALPLNNNTIVTTNGDNIEDHEVEDLADGGLEVDLHDLGISAEDIRAMKRIDACLSERLRQAQQAQAGTSNAPAAAGAKGKGLQLSAEEMEEQLNKLKEQELRCKAM*
Ga0182163_12115601	3300015350	Switchgrass Phyllosphere	MTAKKKPNPGASEANASTEAPPSTDNALVPANNDNEDRGQDLEVEDLPDGEFEVDLHDLGISAEDILAMKRINARLTERLRHAQQAQAGTS
Ga0182169_10301571	3300015352	Switchgrass Phyllosphere	MAAKKKPNPSASEPNASTEAPPSTDNALVPSNGNNTIADHDEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTRLSECIRQSQQAQAGPSIAPAATRAKGKGHELTAEELEEQLNKLKEQELHYKAMR*
Ga0182169_10800371	3300015352	Switchgrass Phyllosphere	MIAKKKPNPGVSEANASAEAPPSADNALVPMNNNNNEDQGEDYEVEDLADGEFEVDLHDLGISAEDILAMKRIDARLTERLRHAQQAQAGTSNAPVATRSKGK*
Ga0182179_11248511	3300015353	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEAPPSTDNALVPANNDNEDQGEELEVEDLADGEFEVDLHDLGISAEDILSMKRIDARLTEHLRNMQQSQAGPSNALVTTRSKGKCRQLTAEELEEQLNKLKEEELCWKAMRQAIRDR
Ga0182179_11336451	3300015353	Switchgrass Phyllosphere	MSVKKKPNPGASEANASTEALAPTDKTLILVNNNEDHDEDLEVEDLADGGLEVDLHDLGISAEDIRAMKRIDACLSERLHQVQQAHGGTSNAPAAAGEKGKGHQLS
Ga0182179_11808331	3300015353	Switchgrass Phyllosphere	MAAKKKPNPGASEANTSAEAPPSTNNALVPTNDNTSGDQGEDFEVEDVADGDFEVELHDLGISAEDIQAMKRIDARLSEHLRQAQQAQAGTSNAPIATRTKGKGHELTAEELEEQLNKLKEEELSCKAMRQSI*
Ga0182167_11673691	3300015354	Switchgrass Phyllosphere	MALKKKPNPGASEANASTEALPSNNNTIVTTNGDNNEDHGDDLEVEDLADGGLEADLHDLGISAEDIRAMWRINACLAERLHQAQQAQAGTSNVPAAATAKGKGHQLSAEEIEDQLNKLKEQELR*
Ga0182199_11080972	3300017412	Switchgrass Phyllosphere	PRHDDMAAKKKPNPSASEPNASTEAPPSTDNALVPSNGNNTIDDHDEDLEVEDLEVEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTHLSECLRQTQQAQAGPSTAPAATRAKGKGHELTAEELEEQLNKLKEQELHYKAM
Ga0182199_11087341	3300017412	Switchgrass Phyllosphere	MAAKKKPNPIASETNASAEAPPSNDNTLAPNDNEDHGKDFEVKDLADGDFEVDLHDLGISAEDIQVMKKIDAHLSERLRQAQQAQAAR
Ga0182195_11789421	3300017414	Switchgrass Phyllosphere	PPAVRPRHDHMAAKKKPNPSASESNASTKAPPSTDNALVPSNGNTTIDDHDEDLEDEYLADGNFEVDLHDHGISAEDIQVMKRIDTRLSECLRQTQQAQAGPSTAPAATRAKGKGHELTAEELEEQLNKLKEQELHYKAMR
Ga0182196_10674692	3300017432	Switchgrass Phyllosphere	MAAKKKPNPSASEPNASTEAPPSTDNALVPSNGNNTIADHDEGLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTRLSECIRQSQQAQAGPSIAPAATRAKGKGHELTTEELEEELNKLKE
Ga0182196_11540921	3300017432	Switchgrass Phyllosphere	MAAKKKPNPGASEATASTEAPPSTDNALITTNNDNNEGHGEDLADGDFEVDLHDLGISVEDIRVMRRIDARLSERLRQAQQAQAGTSNAPAATRAKGKG
Ga0182194_10957712	3300017435	Switchgrass Phyllosphere	MTAKKKPNPGVLEANASAEAPPSADNALVPMNNNNNEDQGEDYEVEDLADGEFEVDLHDLGISAEDILAMKRIDARLTERLRHAQQAQAGTSNAPVATRSKGK
Ga0182200_10214961	3300017439	Switchgrass Phyllosphere	MAAKKKPNPGTSEANASTEAPPSTDNTLVTTNGNDNNTEDHGEDFEAEDLADGDFEVDLHDLRISVEDIRVMRRIDARLSERLRQAQQAQAGTSNAPAATRAKGKGQELTAEE
Ga0182200_10879152	3300017439	Switchgrass Phyllosphere	CCNLFAPKSVLHQQFWCPPAVRPRHDDMAAKKKPNPSASESNASTKAPPSTDNALVPSNGNNTIDDHDEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTHLSECLRQTQQAQASPSTAPAATRAKGKGHELTAEELEKQLNKLKE
Ga0182200_11504731	3300017439	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEALPSNNNIIVATNGSNNDHGEDLEVEDLTDGGLEVDLHDLGISADDIQAMKRIDACLAERLHQAQQAQAGTSNAPAP
Ga0182214_10934301	3300017440	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTEAPPSTDNALVPANNDNEDQGEELEVEDLADGEFEVDLHDLGISAKDILAMKRIDARLTEHLLNMQQAQAGPSNPPVTTRSKGKGR
Ga0182198_10200792	3300017445	Switchgrass Phyllosphere	MAAMRKPNLGASKANASAEVPPSTDNALVPTNNNEDQGEDHEIEDLTNGGFEVDLHDLGIYAEDILAMKRIDACLTEHLRHAQQAQAGTS
Ga0182198_10505132	3300017445	Switchgrass Phyllosphere	MAAKKKPNPGASEEANALTEAPPSTNDALVTTNNDNEDQVENIEIEDLTEGKFEVNLHNLGITAEDIQALKRIDACLIERLRHAQQ
Ga0182198_10836341	3300017445	Switchgrass Phyllosphere	MVAKKKPNPSASESNASTKAPPSTDNALVPSNGNNTIDDHDEDLEVEDLADGNFEVDLHDLGISAEDIQVMKRIDTRLSECIRQSQQAQAGPSIAPAATRAKGKGHELTAEELEEQLNKLKEEELRCK
Ga0182215_11210781	3300017447	Switchgrass Phyllosphere	MAAKKKPNTGASEANASTEAPPSTGNTLVAMGNDNKDHGEDLEVEDLTDGDLEVELHDLGISAEDIQVMKRIDARLVERLRQAQQAQAGTSNAPVATRTKGKGHELTAEELEEQL
Ga0182216_10694881	3300017693	Switchgrass Phyllosphere	MAAKMKPKPGASEANALTEAPPSTDNTLVPANNDNKDQGEDLEVEDLVDGEFEVDLHDLGISTEDILAMKRIDARITERLRHVQQVQAGPSNAPVTTRSKGKCRQLTAEELEEQ
Ga0207703_114413312	3300026035	Switchgrass Rhizosphere	MAAKKKPNPSALEANASTEAQPSNNIIVPINTSNNHDHGEDLEVEDLADVGLEVDLHDLGISVEDIQAMKRIDARLAERQLQAQQAQAGTSNVAAATKKGKGHQLSAEELEEQLNKLKEQEHKQLIK
Ga0268328_10365521	3300028050	Phyllosphere	MAAKKKPNPSASEANASTEAQPSNNIIVPTNADDDHGEDLEVEDLADGGLEVDLHDLGISVEYIQVMKRIDARLAERQLQAQQAQAGTSNAAAATAK
Ga0268340_10569402	3300028064	Phyllosphere	MAAKKKPNPGASEEANALTEAPPSTNDALVTTNNDNEDQVENIESEDLAEGKFEVNLHDLGITAEDIQALKRIDARLIERLRHAQQAQAGTSNAPVATRSKGKGCELTAQELEEQLNKLREEELRC
Ga0268348_10125221	3300028143	Phyllosphere	MAAKKKPNPGASEANASTKAPALTDNTIVTTNGDNNEDHGEDFEVEDLADGDFKVDLHDFGISAEDIQVMKRIDARLSKRLRHAQQAQAGTSNAPVATRAKGMSSLCKSSR
Ga0214492_10566561	3300032464	Switchgrass Phyllosphere	MVRPRHDHMALKKKPNPGASEANASTEALPSNNNTIVTTNGDNNEDHDDDLEVEDLADGGLEADLHDLGISAEDIRAMKRINACLAERLHQAQQAQAGMSNVPAAATAKGKGHQLS
Ga0214488_10035473	3300032467	Switchgrass Phyllosphere	MVRPRHDHMALKKKPNPGASEANASTEALPSNNNTIVTTNGDNNEDHDDDLEVEDLADGGLEADLHDLGISAEDIRAMWRINACLAERLHQAQQAQAGMSNVPAAATAKGKGHQLSAEEIEDQLNKLKEQELR
Ga0214488_10998001	3300032467	Switchgrass Phyllosphere	MAVKKKPNTGASEGNASTEAPPSTNDALVTTNNNNKDQGEEFEVEDLADGDFEVDLHDLGISAEDIQVMKRIDARLSERLHHVQQAQAGTSNAPVATKAKGKGHELTAQELKDQLN
Ga0214488_11335951	3300032467	Switchgrass Phyllosphere	MAAKKKPNPSASEANASTEAPASTDGTLVTTNGNNEDHGEDFEVEDLADGDFEVDLHDLGISAEDIQVMKRIDARLSERLHQAQQAQAGTSNAPVATRAKGKGHELTAEELEEQLNKLKE
Ga0214491_10448292	3300032469	Switchgrass Phyllosphere	MAAKKKPNPSALEANASTEAQPSNNIIVPTNADDDHGEDLEVEDLEVEDLADGGLEVDLHDLGISVEDIQVMKRIDARLAERQLQAQQAQAGTSNAAAATAK
Ga0321339_10048213	3300032551	Switchgrass Phyllosphere	MAAKKKPNPGASETNASAEAPPSNDNTLAPNDNEDHGEDFEVKDLADGDFEVDLHDLGISAEDIQVMKKIYARLSERLRQAQQAQAGTSNAPVATRAKGKG
Ga0214484_11237281	3300032591	Switchgrass Phyllosphere	MALKKKPNPGASEANASTEALPSNNNTIVTTNGDNNEDHDDDLEVEDLADGGLEADLHDLGISAEDIRAMWRINACLAERLHQAQQAQAGTSNVPAAATAKGKGHRLSAEEIE
Ga0214504_10639211	3300032592	Switchgrass Phyllosphere	MVRPRHDHMALKKKPNPGASEANASTEALPSNNNTIVTTNGDNNEDHDDDLEVEDLADGGLEADLHDLGISAEDIRAMKRINACLAERLHQAQQAQAGMSNVPAAATAKGKGHQLSAEEIEDQLNKLKEQELR
Ga0321338_13236571	3300032593	Switchgrass Phyllosphere	MAAKKKPNPGASETNASAEAPPSNDNTLAPNDNEDHGEHFEVKDLADGDFKVDLHDLGISAEDIQVMKKIDAHLSERLRQAQQAQAGTSNAPVATRAKGKGHELTTEELEEQ
Ga0214501_12431631	3300032625	Switchgrass Phyllosphere	MAAKKKPSPSASEANASTEAQPSNNIIVPTNADNNDHDEDLEVEDLADGGLEVDLHDLGISAEDIQAMKRIDARLAERQLHLQQAQAGTSNAAAATAKGKGHQL
Ga0214497_11023761	3300032689	Switchgrass Phyllosphere	MAAKKKPNPGASETNASAEAPPSNDNTLAPNDNEDHGEDFEVKDLADGDFEVDLHDLGISAKDIQVMKKIYARLSERLRQAQQAQAGTSNAPVATRAKGKGHELTTEELEEQLNKLKEELRCKAMW
Ga0214499_12248431	3300032697	Switchgrass Phyllosphere	MAAKKKPNPGASEANALAEAPPSTNNALVPTNNDNNEDQGKDLEVEDLADGEFEVDPHDLGITVEDILAMKRIDTCLTGSLRHAQQAQAGTSNAPVATRSKGKGHELTAEELEEQLTR
Ga0314746_10122041	3300032758	Switchgrass Phyllosphere	MAAKKKPSPSASEANASTEAQPSNNIIVPTNADNNDHDEDLEVEDLADGGLEVDLHDLGISAEDIQAMKRIDARLAERQLQAQQAQTGTSNAAAAITKGKGHQLSAEELEEQFSKLKEQELRCKAMR
Ga0314744_10012986	3300032792	Switchgrass Phyllosphere	MALKKKPNPGASEANASTEALPSNNNTIITTNGDNNEDHGDDLEVEDLADGGLEVDLHDLGISAEDIRAMKRINACLAERLHQAQQAQAGMSNVPAAATAKGK
Ga0314744_10616541	3300032792	Switchgrass Phyllosphere	MAAKKKPSPSASEANASTEAQPSNNIIVPTNADNDEDLEVEDLADGGLEVDLHDLGISAEDIQAMKRIDASLAERQLQAQQAQAGTSNAAAAITKGKGHQLSAEELEEQ
Ga0314743_10744111	3300032844	Switchgrass Phyllosphere	MAAKKKPNPGASEANASTKAPPSKIDALVTTNNDNNEDQDEDIEVEDLAEGEFEVDLHDLGIATEDIQALKRIDARLVERLRHAQQAQAGTSNVPVATRSKGKGHELTVEELEEQLNKLKEE
Ga0314751_11230651	3300032889	Switchgrass Phyllosphere	MAAKKKPNPGASETNASAEAPPSNDNTLAPNDNEDHGEDFEVKDLADGDFKVDLHDLGISAEDIQVMKKIDACLSERLRQAQQAQAGTSNAPVATRA
Ga0314739_10133152	3300032913	Switchgrass Phyllosphere	MAAKKKPNPGASETNASAEAPPSNDNTLAPNDNEDHGEDFEVKDLADGDFEVDLHDLGISAEDIQVMKKIDTHLSERLRQAQQAQAAHQMRRWQQE
Ga0314734_10332402	3300032916	Switchgrass Phyllosphere	MALKKKPNPGASEANASTEALPSNNNTIVTTNGDNNEDHDDDLEVEDLADGGLEADLHDLGISAEDIRAMWRINACLAERLHQAQQAQAGTSNVPAAATAKGKGHRLSAEEIEDQLNKLKEQELR
Ga0314722_10010872	3300032966	Switchgrass Phyllosphere	MALKKKPNPGASEANASTEALPSNNNTIITTNGDNNEDHGDDLEVEDLADGGLEVDLHDLGISAEDIRAMKRINACLAERLHQAQQAQAGMSNVPAAATAKGKGHQLSAE
Ga0314759_10933801	3300033535	Switchgrass Phyllosphere	MAAKKKPSPSASEANASTEAQPSNNIIVPTNADNNDHDEDLEVEDLADGGLEVDLHDLGISAEDIQAMKRIDARLAERQLQAQQAQAGTSNAAAATAKGKGHQLSAEEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060514

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences