Metagenome / Metatranscriptome Family F060465

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060465
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	66 residues
Representative Sequence	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGGKTPLWLDFADGSVPFWNLFAKPGVTALASNL
Number of Associated Samples	119
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.25 %
% of genes near scaffold ends (potentially truncated)	86.47 %
% of genes from short scaffolds (< 2000 bps)	81.95 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.218 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (33.835 % of family members)
Environment Ontology (ENVO)	Unclassified (29.323 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.632 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 23.16% β-sheet: 0.00% Coil/Unstructured: 76.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF04998	RNA_pol_Rpb1_5	14.29
PF13442	Cytochrome_CBB3	12.78
PF03712	Cu2_monoox_C	3.01
PF01082	Cu2_monooxygen	2.26
PF05000	RNA_pol_Rpb1_4	1.50
PF13185	GAF_2	0.75
PF13822	ACC_epsilon	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0086	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	Transcription [K]	15.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.22 %
Unclassified	root	N/A	12.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.22 %
Unclassified	root	N/A	12.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.22 %
Unclassified	root	N/A	12.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.71 %
Unclassified	root	N/A	12.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.20 %
Unclassified	root	N/A	12.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.14 %
Unclassified	root	N/A	12.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	37.59 %
Unclassified	root	N/A	12.78 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.59 %
Unclassified	root	N/A	12.78 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.59 %
Unclassified	root	N/A	12.78 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.59 %
Unclassified	root	N/A	12.78 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT02HDVHL	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300000956\|JGI10216J12902_107299652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1729	Open in IMG/M
3300001361\|A30PFW6_1571880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300002244\|JGI24742J22300_10040100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300004480\|Ga0062592_100777640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	845	Open in IMG/M
3300005166\|Ga0066674_10238592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300005166\|Ga0066674_10517254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300005177\|Ga0066690_10262386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300005179\|Ga0066684_11120152	Not Available	503	Open in IMG/M
3300005355\|Ga0070671_101279174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300005364\|Ga0070673_100028302	All Organisms → cellular organisms → Bacteria	4166	Open in IMG/M
3300005437\|Ga0070710_10296531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300005526\|Ga0073909_10667823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300005544\|Ga0070686_100475065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	966	Open in IMG/M
3300005549\|Ga0070704_102266098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300005553\|Ga0066695_10606171	All Organisms → cellular organisms → Bacteria → Terrabacteria group	656	Open in IMG/M
3300005558\|Ga0066698_10353283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300006034\|Ga0066656_10595481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300006175\|Ga0070712_101997639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300006791\|Ga0066653_10313667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300006800\|Ga0066660_10728091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	811	Open in IMG/M
3300007258\|Ga0099793_10430757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300009012\|Ga0066710_102088150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300009088\|Ga0099830_10324454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1233	Open in IMG/M
3300009094\|Ga0111539_13551598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300009098\|Ga0105245_12615811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300009137\|Ga0066709_101080942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1178	Open in IMG/M
3300009137\|Ga0066709_104410234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300010040\|Ga0126308_10116684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1654	Open in IMG/M
3300010128\|Ga0127486_1004178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300010396\|Ga0134126_10911107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	988	Open in IMG/M
3300011270\|Ga0137391_10907138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300012096\|Ga0137389_10638048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300012189\|Ga0137388_11639178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300012200\|Ga0137382_10119254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1762	Open in IMG/M
3300012200\|Ga0137382_10724204	All Organisms → cellular organisms → Bacteria → Terrabacteria group	713	Open in IMG/M
3300012201\|Ga0137365_11318653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300012204\|Ga0137374_11104110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300012208\|Ga0137376_11525291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300012208\|Ga0137376_11556678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300012209\|Ga0137379_11267945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300012209\|Ga0137379_11833338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300012210\|Ga0137378_10733882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300012285\|Ga0137370_10741544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	610	Open in IMG/M
3300012349\|Ga0137387_10384630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300012353\|Ga0137367_10656589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300012355\|Ga0137369_10024370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5649	Open in IMG/M
3300012355\|Ga0137369_11116571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012358\|Ga0137368_10402152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300012359\|Ga0137385_10395912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1178	Open in IMG/M
3300012406\|Ga0134053_1350880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300012409\|Ga0134045_1332044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2181	Open in IMG/M
3300012685\|Ga0137397_10282714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300012915\|Ga0157302_10203084	All Organisms → cellular organisms → Bacteria → Terrabacteria group	712	Open in IMG/M
3300012927\|Ga0137416_10121181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2003	Open in IMG/M
3300012955\|Ga0164298_10254614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300012957\|Ga0164303_10145656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1246	Open in IMG/M
3300012961\|Ga0164302_11469487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300012977\|Ga0134087_10495322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300012984\|Ga0164309_10684024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812	Open in IMG/M
3300012984\|Ga0164309_10819889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300012987\|Ga0164307_11085653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300014157\|Ga0134078_10676901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300018000\|Ga0184604_10282178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300018081\|Ga0184625_10221239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	992	Open in IMG/M
3300018433\|Ga0066667_10922108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300019869\|Ga0193705_1057811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300019875\|Ga0193701_1110829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300020004\|Ga0193755_1215272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300021078\|Ga0210381_10141170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300021078\|Ga0210381_10158947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300021080\|Ga0210382_10222574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300021080\|Ga0210382_10544595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300021418\|Ga0193695_1119558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300025904\|Ga0207647_10554140	All Organisms → cellular organisms → Bacteria → Terrabacteria group	637	Open in IMG/M
3300025906\|Ga0207699_10563479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300025931\|Ga0207644_10495821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1007	Open in IMG/M
3300025935\|Ga0207709_11393057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300026075\|Ga0207708_11288606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	640	Open in IMG/M
3300026116\|Ga0207674_12202840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300026342\|Ga0209057_1213009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300026538\|Ga0209056_10598442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300027379\|Ga0209842_1016499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1442	Open in IMG/M
3300027561\|Ga0209887_1028264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1301	Open in IMG/M
3300027862\|Ga0209701_10188661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300027875\|Ga0209283_10206297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1305	Open in IMG/M
3300028047\|Ga0209526_10349567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	991	Open in IMG/M
3300028704\|Ga0307321_1030967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	970	Open in IMG/M
3300028705\|Ga0307276_10015733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1421	Open in IMG/M
3300028708\|Ga0307295_10123171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300028711\|Ga0307293_10104661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300028712\|Ga0307285_10059472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300028714\|Ga0307309_10180189	All Organisms → cellular organisms → Bacteria → Terrabacteria group	548	Open in IMG/M
3300028715\|Ga0307313_10106738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300028717\|Ga0307298_10014388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2006	Open in IMG/M
3300028719\|Ga0307301_10083906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1001	Open in IMG/M
3300028768\|Ga0307280_10051863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300028778\|Ga0307288_10017271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2278	Open in IMG/M
3300028778\|Ga0307288_10067484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1259	Open in IMG/M
3300028782\|Ga0307306_10040696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1132	Open in IMG/M
3300028784\|Ga0307282_10231691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300028787\|Ga0307323_10091415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1089	Open in IMG/M
3300028790\|Ga0307283_10196370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300028791\|Ga0307290_10147118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300028791\|Ga0307290_10308423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300028802\|Ga0307503_10029899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1903	Open in IMG/M
3300028814\|Ga0307302_10079997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1547	Open in IMG/M
3300028819\|Ga0307296_10629544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300028824\|Ga0307310_10553606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300028828\|Ga0307312_10074259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2067	Open in IMG/M
3300028872\|Ga0307314_10000714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	7245	Open in IMG/M
3300028881\|Ga0307277_10107598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1186	Open in IMG/M
3300028881\|Ga0307277_10441289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300028885\|Ga0307304_10470666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300030785\|Ga0102757_11355587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300031200\|Ga0307496_10042581	All Organisms → cellular organisms → Bacteria → Terrabacteria group	745	Open in IMG/M
3300032180\|Ga0307471_104151640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.23%
Host-Associated	Host-Associated	9.02%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.46%
Plants	Host-Associated → Plants	9.02%
Aquatic	Environmental → Aquatic	6.77%
Solid Waste	Engineered → Solid Waste	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Sediment	Environmental → Aquatic → Sediment	3.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.76%
Freshwater	Environmental → Aquatic → Freshwater	3.01%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.75%
Grass	Engineered → Solid Waste → Grass	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.94%
Loam	Environmental → Terrestrial → Soil → Loam	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.26%
Sand	Environmental → Terrestrial → Soil → Sand	1.50%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.50%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	33.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.01%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.26%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_02880160	2170459016	Switchgrass, Maize And Mischanthus Litter	VKRLGVVAAAVLALALLGGRSAPAEGLQADCNVITGNPAWLDFADGSVPFWQMFAKPGVTALASNLIFPPKLRAAG
JGI10216J12902_1072996522	3300000956	Soil	VKRLGVLVAAALALALTGGRSAPAQELQADCNLFGKAPIWLDFADGSVPFWNLFAKPG
A30PFW6_15718802	3300001361	Permafrost	GKGAPAQQLEANCSLFTKAPLWLDFADGSVPFWSLFAKPGVTALASNLIFPPQLREAGAQTAYFD
JGI24742J22300_100401002	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGITALASNFIFPPKLRAGGAQTA
Ga0062592_1007776402	3300004480	Soil	VKRLGVLVAVVVSLALAGGKAAPAQQLQANCSLFDVGKASPLWLDFADGSVPFWSLFAKPGVTALASNLIFP
Ga0066674_102385921	3300005166	Soil	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGGKTPLWLDFADGS
Ga0066674_105172541	3300005166	Soil	VRKAGVLIAAVVLALSVGSRSGDAQQLQANCALPSQTPVWLDFADGSVPFWNLFAKPGVVALASNLIYPPKLREAGAQ
Ga0066690_102623861	3300005177	Soil	VKRLGVAAAAVVVLALAGGKGAPAQELQANCVLPAKTPVWLDFADGSVPFWQEFARPGIVALASNLIFPP
Ga0066688_105487812	3300005178	Soil	VKRLGVAAAAVVVLALAGGKGAPAQELQANCVLPAKTPVWLDFAD
Ga0066684_111201521	3300005179	Soil	LPVKRLGVVAAALVALALVGGRGAPAQELQANCVLPSKTPVWLDFADGSVPFWDEF
Ga0070671_1012791741	3300005355	Switchgrass Rhizosphere	MPGLAATVRRVKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFTKTPLWLDFADGSVPFWSTFAKPGVTALASNLLYPPKL
Ga0070673_1000283023	3300005364	Switchgrass Rhizosphere	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGITALASNFIFPPK
Ga0070710_102965311	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPG
Ga0073909_106678231	3300005526	Surface Soil	MPGLAATVRRVKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFTKTPLWLDFAPDSAPFWGLFARPGVTALASNLTFPQKLRDAGAQ
Ga0070686_1004750651	3300005544	Switchgrass Rhizosphere	MPGLAATVRRVKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFTKTPLWLDFADGSVPFWSTFAKPGVTALASNLLYPPKLRAAGA
Ga0070704_1022660981	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLGVLTAIVAALALFGGTRAPAQRLQANCVLPSQTPVWLDIVPMSVPFWNLFAKPGIVAMGSNLIYPARLRAAGAQ
Ga0066695_106061711	3300005553	Soil	VPGASLLPVKRLGVLAAAVAVAAAFALLGSSRAPAERLQANCSLFTGKAPLWLDFADGSV
Ga0066698_103532832	3300005558	Soil	VKRLGVLVAAVVSLALAGGKGAPAQQLQANCSLFGNKTPLWLDFADG
Ga0066705_102271451	3300005569	Soil	VAGAVLALVLVGGKGAPAQELQANCVLPSQTPVWLDFADGSVPFW
Ga0066656_105954811	3300006034	Soil	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGGKTPLWLDFADGSVPFWNLFAKPGVTALASNL
Ga0070712_1019976392	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPGLAATVRRVKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFTKTPLWLDFADGSVPFWSTFAKPGVTALASNLLYPPKLRAAGAQTAYFDLY
Ga0066653_103136673	3300006791	Soil	VKRLGVLVGAVLALALAGGKGAPAQQLEANCSLFTKTPLWLDFADGSVPFWSLFARPGVTALASNLIFPPKLREAGA
Ga0066660_107280912	3300006800	Soil	VKRLGVLAAAVAALALAGGTRAPAQELQANCVLPTQTPVWLDFADGSVPFWDLFAEPGVVAMASNLIFPPKLREAGA
Ga0099793_104307572	3300007258	Vadose Zone Soil	VKRFGVLVAAVLALALTGGEGAPAQQLQANCSLFGTQAAPLWLDFADGSVPFWNLFAKPGVTALASN
Ga0066710_1020881502	3300009012	Grasslands Soil	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGSKTPLWLDFADGSVPFWSLFARPGVTALASNLIYPPKLRE
Ga0099830_103244541	3300009088	Vadose Zone Soil	LPGLAATVRRVKRLGVLVAAVVALALAGGRGAPAQQLQANCSLFTKTPLWLDFAPDSA
Ga0111539_135515981	3300009094	Populus Rhizosphere	VPVKRLGVVAAIAALALVGSAQAPARQLQANCVLPSRAPLWLDFADGSVPFWNMFAKPG
Ga0105245_126158111	3300009098	Miscanthus Rhizosphere	VKKLGVLVAVVVALALAWEKSAPAGRLEANCNVMTATPTWLDFADGSVPFWQVFAKP
Ga0066709_1010809422	3300009137	Grasslands Soil	VKRLGVLVVAAVALALTGGKGAPAERLQANCVLPAQTPVWLDFADGCVPFWNLFAKPGVVALA
Ga0066709_1044102342	3300009137	Grasslands Soil	VKRLGVLVAAVLAFALAGGKAAPAQQLQANCSLFTGKAPLWLDFADGSVPFWNLFAKPGVTALAS
Ga0111538_104643571	3300009156	Populus Rhizosphere	VTVKRLGVVAAIAALALVGSAQAPAHQLQANCVLPSRAPLWLDFADGSV
Ga0126308_101166841	3300010040	Serpentine Soil	LPVKRLGVLVAAVAAVSAIALVGSERAPAQQLQANCVLPSKAPVWLDFADGSVP
Ga0127486_10041782	3300010128	Grasslands Soil	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGGKTPLWLDFADGSVPFWNLFARPGVTALASN
Ga0134126_109111071	3300010396	Terrestrial Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGS
Ga0137391_109071381	3300011270	Vadose Zone Soil	VKRLGVLVAAVLALALAGGKGAPAQQLQANCVLPTQTPVWLDFADGSVPFWNLFAKPGVVALASNLIYP
Ga0137389_106380481	3300012096	Vadose Zone Soil	VKRLGVLVAAVLAFALAGGKAAPAQQLQANCSLFTGKAPLWLDFADGSVPFWNLFAKPGVTALASNLIF
Ga0137388_116391781	3300012189	Vadose Zone Soil	VKRLGVLAAIVAAIALLGSSRAPAQRLQANCVLPSQTPVWLDFAPKSVPFWNLFAKPGIVAMGSNLIYPARLR
Ga0137383_110536962	3300012199	Vadose Zone Soil	VAAALVALALAGGRGAPAQELQANCVLPSQTPVWLDFADGSVPFWQ
Ga0137382_101192541	3300012200	Vadose Zone Soil	VKRFGVLVAAVLALALTGGKGAPAQQLQANCSLFGTQAPLWLDFAAGSVPFWNLFAN
Ga0137382_107242042	3300012200	Vadose Zone Soil	VKRLGVLVVAVLAFALAGGKAAPAQQLQANCSLFTGKAPLWLDFADGSVPFWNLFAKPGVTALASTLIYPPKLRAGGA
Ga0137365_113186532	3300012201	Vadose Zone Soil	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGAKTPLWLDFADGSVPFWNLFA
Ga0137374_111041102	3300012204	Vadose Zone Soil	VKRLGVVAAAVVGLALVGGKSAPAQQLEANCSLFTKTPIWLDFADGSVPFW
Ga0137376_115252912	3300012208	Vadose Zone Soil	VKRFGVLVAAVLALALTGGKGAPAQQLQANCSLFGTQAAPLWLDFADGSVPFWNLFARPGVTALASNLIYPPKLRDAGAQTAY
Ga0137376_115566781	3300012208	Vadose Zone Soil	VLALTGGKSAPAQQLQANCSLFGTQAPLWLDFADGSVPFWNLFAKPGVTALASNLIYPPKLRDAGAQTAYFDL
Ga0137379_112679451	3300012209	Vadose Zone Soil	VKRFGVLVAAVIALALAGGKGAPAQQLQANCSLFDGKAPLWLDFADGSVPFWNLFAKPG
Ga0137379_118333381	3300012209	Vadose Zone Soil	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGVKTPLWLDFADG
Ga0137378_107338821	3300012210	Vadose Zone Soil	VKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFGTKTPLWLDFADGSVPFWNL
Ga0137370_107415441	3300012285	Vadose Zone Soil	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGGKTPLWLDFADGSVPFWNLFARPGV
Ga0137387_103846301	3300012349	Vadose Zone Soil	VKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFDGKAPLWLDFADGSVPFWNLFAKP
Ga0137367_106565892	3300012353	Vadose Zone Soil	VAAAVLALALVGGKGAPAQELQANCSLFTKTPIWLDFADGSVPFWNIFARPGVTALASNLIYPPKLRAAGAETAY
Ga0137369_100243701	3300012355	Vadose Zone Soil	LPVKRLGVVAAAVLALALVGGKGAPAQELQANCSLFTKTPIWLDFADGSVPFWNIFARPGVTALASNLIYPPKLRAA
Ga0137369_111165711	3300012355	Vadose Zone Soil	VKRLGVLAVAVVAFALAGGTGARAQQLQANCILASTTPVWLDFADGSVPFWNLFAKPGVVAMASNFIFPPKLRAAAALTVCSDV*
Ga0137368_104021521	3300012358	Vadose Zone Soil	LPVKRLGVVAAAVLALALVGGKGAPAQELQANCSLFTKTPIWLDFADGSVPFWNIFARPGVTALASNLIYPPKLRAAGAETAYFDLY
Ga0137385_103959122	3300012359	Vadose Zone Soil	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGVKTPLWLDFADGSVPFWNLFAKPGVTAL
Ga0134053_13508802	3300012406	Grasslands Soil	VKRVGVVVAAVLALALAGGKGAPAQQLQANCSLFGSKTPLWLDFADGSVPFWSLFAKPGVTALASNLIFP
Ga0134045_13320442	3300012409	Grasslands Soil	VKRFGVLVAAVLALALAGGKGAPAQQLEANCSLFGSKTPLWLDFTDGSVPFWNLFARPGVTALASNLIYPPKL
Ga0137397_102827142	3300012685	Vadose Zone Soil	VKRLGVLVAAVLALALVGGKGAPAQQLQANCVLPSQTPVWLDFADGSVPFWNLFAK
Ga0157302_102030841	3300012915	Soil	VKRLGVLVAAVVSLALAGGKGAPAQQLQANCSLFGSKTPLWLDFADGSVPFWSLFAKPGVTALASNLIFPPKLREAGAQTA
Ga0137416_101211812	3300012927	Vadose Zone Soil	LPGLAATVRRVKRFGVLVAAVLALALTGGKGAPAQQLQANCSLFGTQAAPLWLDFADGSVPFWNLFAKPGVTALASNLIYPPRLRDAGA
Ga0162653_1000907172	3300012937	Soil	VKRLGLLVVVALALALTGGGGATAQGLAAKCTLPARTPVWLDFADGSV
Ga0164298_102546142	3300012955	Soil	VRRLGVVAAAVAALALVGGRGAPAEGLQADCNLFTSTPTWLDFADGSVPFWNVFAKPGVTALASNLIYPPRLRAAGARTA
Ga0164303_101456562	3300012957	Soil	MANLSGVKRLGVVAAAVLALALLGGRNAPAEQLQADCNVISGNPAWLDFADGSVPFWKVFAKPGVTALASNLLYPPRLRAAGA
Ga0164303_115014891	3300012957	Soil	VKRLGVLVAVVVSLALAGGKGAPAQQLQANCSLFGNKTPLWLDFAD
Ga0164302_114694871	3300012961	Soil	VRRLGVVAAAVAALALVGGRGAPAEGLQADCNLFTSTPTWLDFADGSVPFWNVFAKPGVTALASNLIYPPRLR
Ga0134087_104953221	3300012977	Grasslands Soil	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGSKTPLWLDFADGSVPFWNLFAKPGVTALASNL
Ga0164309_106840242	3300012984	Soil	VRRLGVVAAAVAALALVGGRGAPAEGLQADCNLFTSTPTWLDFADGSVPFWNVFAKPGVTALASNLIYPP
Ga0164309_108198892	3300012984	Soil	VKRLGVLVAVVVSLALVGGKGAPAQQLQANCSLFGNKTPLWLDFADGSVPFWSLFAKPGV
Ga0164308_122451181	3300012985	Soil	VKRLGVVAAAVLALALLGGRNAPAEQLQADCNVISGNPAWLDFADGS
Ga0164307_110856531	3300012987	Soil	VKRLGVLVAVVVSLALAGGKGAPAQQLQANCSLFGNKTPLWLDFADGSVPFWSLFAKPGVTALASNLIFPPKLREAGAQT
Ga0134078_106769011	3300014157	Grasslands Soil	VKRFGVLVAAVLALALAGGKGAPAQQLEANCSLFGSKTPLWLDFADGSVPFWNLFAR
Ga0132258_132116601	3300015371	Arabidopsis Rhizosphere	VKKLGVVAAALAVLALVGGRGAPAERLQADCNVITGNPAWLDFAAGSVPFW
Ga0184604_102821781	3300018000	Groundwater Sediment	VKRLGVLVAAVVSLALAGGKAAPAQQLQANCSLFGNTTPLWLDFADGSVPFWSLFAKPGVTALASNLIYPPKLREAGAQTAYFDLYLNRRV
Ga0184605_102327231	3300018027	Groundwater Sediment	VAAAVVALALVGGRGAPAQGLQANCILPSQTPVWLDFADGSVPFWQ
Ga0184619_100691852	3300018061	Groundwater Sediment	VAAAVVALALVGGRGAPAQGLQANCILPSQTPVWLDFADGSVPF
Ga0184625_102212391	3300018081	Groundwater Sediment	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFTGKAPLWLDFADGSVPFWNLF
Ga0066667_109221082	3300018433	Grasslands Soil	VKRLGVLVAAVLAFALAGGKAAPAQQLQANCSLFGTKTPLWLDFADGSVPFWNLFAKPGVTALAS
Ga0193705_10578112	3300019869	Soil	VKRLGVLVAAVVSLALAGGKAAPAQQLQANCSLFGNTTPLWLDFADGSVPFWSLFAKPGVTALASNLIYPPKLREAGAE
Ga0193701_11108292	3300019875	Soil	LPGLAATVRRVKRLGVLVAAVLALSLAGGKGAPARELQANCSLFTKTPLWLDFTPDSTPF
Ga0193755_12152722	3300020004	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGITALASNFIFPPKLRAGGAQ
Ga0210381_101411702	3300021078	Groundwater Sediment	VKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFTGKAPLWLDFADGSVPFWNLFAKPGVTALAS
Ga0210381_101589471	3300021078	Groundwater Sediment	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKSG
Ga0210382_102225742	3300021080	Groundwater Sediment	VKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFGNKTPLWLDFADGSVPFWSLFARPGVTALASNLIFPPKLREGGAQTAYF
Ga0210382_105445951	3300021080	Groundwater Sediment	VKRLGVLVAAVVALALAGGKGAPAQQLQANCSLFTKTPLWLDFADGSVPFWSLFATPGVTALASNLIFPPKLREGGAQ
Ga0193695_11195582	3300021418	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGVTALASNLIYPPKLR
Ga0222623_102202581	3300022694	Groundwater Sediment	VAAAVVALALVGGRGAPAQGLQANCILPSQTPVWLDFADGSV
Ga0207647_105541401	3300025904	Corn Rhizosphere	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAK
Ga0207699_105634792	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VKRKAFVNATGSRASLLPVKRLGVVAVAVLALALLGGGTAPAERLQANCNVISGNPAWLDFADGSVPFWQVFAKPGVTALASNFIYPPKLRA
Ga0207644_104958211	3300025931	Switchgrass Rhizosphere	MPGLAATVRRVKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFTKTPLWLDFADGSVPFWSTFAKPGVTALASNLLYPPKLRAAGAQTA
Ga0207709_113930571	3300025935	Miscanthus Rhizosphere	MPGLAATVRRVKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFTKTPLWLDFADGSVPFWSTFAKPGVTALASNLLYPPKLRAAGAQTAY
Ga0207708_112886061	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLGVLVVAVVALALSGGHSAPAQQLQANCSLFTGKAPLWLDFADGSVPFWNLFARPGVTAL
Ga0207702_122809841	3300026078	Corn Rhizosphere	LPVKRLGVVAVAVLALALLGGGTAPAERLQANCNVISGNPAWLDFADGSVP
Ga0207674_122028402	3300026116	Corn Rhizosphere	MPGLAATVRRVKRLGVLVAAVLALALAGGKGAPAQQLQANCSLYTKTPLWL
Ga0209057_12130092	3300026342	Soil	LPVKRLGVLAAAVAVAAAFALLGSTRAPAERLQANCALFNGKSPLWLDFADGSVPFWNLFARRGVTALASNFIYPPKLRAGG
Ga0209056_105984421	3300026538	Soil	VKRFGVLVAAVLVLALTGGKSAPAQQLQANCSLFGTQAPLWLDFADGSVPFWNLFAKPGVTALASNLIYPPKLRDAGAQT
Ga0209842_10164991	3300027379	Groundwater Sand	VKRLGVLVAAAAALALAGGNDVPAKQLAANCVLPSKTPVWLDFADGSVPFWNMFAKPGIVAMASNYLFPPKLRAGGA
Ga0209887_10282642	3300027561	Groundwater Sand	VKRLGVLVAAALALALAGGKGAPAKQLAANCILPSQTPVWLDFADGSVPFWNIFAKPGVVAM
Ga0209701_101886612	3300027862	Vadose Zone Soil	LPGLAATVRRVKRLGVLVAAVVALALAGGRGAPAQQLQANCSLFTKTPLWLDFAPDSAPFWS
Ga0209283_102062971	3300027875	Vadose Zone Soil	LPGLAATVRRVKRLGVLVAAVVALALAGGRGAPAQQLQANCSLFTKTPLWLDFAPDSAPFWSLFAR
Ga0209526_103495672	3300028047	Forest Soil	LPGLAATVRRVKRLGVLVAAILALALAGGRGAPAQQVQTNCSLFTKAPLWLDFADGSVPFWNLFAKPGVTALASNL
Ga0307321_10309672	3300028704	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGITALASNFIYPPKLRAGG
Ga0307276_100157332	3300028705	Soil	VKRLGVLVAVVVSLALAGGKGAPAQQLQANCSLFGSKAPLWLDFADGSVPFWSLFAKPGVTALASNLIFPPKLREAGAQ
Ga0307295_101231712	3300028708	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFA
Ga0307293_101046611	3300028711	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFW
Ga0307285_100594722	3300028712	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGITALASNFIYPPKLRAGGA
Ga0307309_101801891	3300028714	Soil	VKRLGVLVAAVVSLALAGGKAAPAQQLQANCSLFGNTTPLWLDFADGSVPFWS
Ga0307313_101067381	3300028715	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSV
Ga0307298_100143881	3300028717	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGITAL
Ga0307301_100839062	3300028719	Soil	VKRLGVLVAAVVSLALAGGKAAPAQQLQANCSLFGNTTPLWLDFADGSVPFWSLFAKPGVTALASNLIYPPKLREA
Ga0307319_102902712	3300028722	Soil	LPVRRLGVVAAAVVALALVGGRGAPAQGLQANCILPSQTPVWLDFADGSVPFWQV
Ga0307280_100518632	3300028768	Soil	VKRLGVLVAVALALALTGGKGAPAQQQQANCSLFGKAPLWLDFADGSVPFWNMFAKPGI
Ga0307288_100172711	3300028778	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGIT
Ga0307288_100674841	3300028778	Soil	VKRLGVLVAAVVSLALAGGKGAPAQQLQANCSLFGNTTPLWLDFADGSVPFWSLFAKPGVTALASNLIFPPKLREAGAQTA
Ga0307306_100406962	3300028782	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKP
Ga0307282_102316912	3300028784	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNM
Ga0307323_100914152	3300028787	Soil	VKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFGNKTPLWLDFADGSVPFWSLFAKPGVTALASNLIFPPKLREAGAQTA
Ga0307283_101963701	3300028790	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMF
Ga0307290_101471182	3300028791	Soil	VKRLGVLVAAIVSLALAGGKGAPAQQLQANCSLFDGKASPLWLDFADGSVPFW
Ga0307290_103084232	3300028791	Soil	VKRLGVLVAAVVSLALAGGKAAPAQQLQANCSLFGNTTPLWLDFADGSVPFWSLFAKPGI
Ga0307287_100413282	3300028796	Soil	VAAAVVALALVGGRGAPAQGLQANCILPSQTPVWLDFADGSVPFWQVFAKPGVI
Ga0307503_100298992	3300028802	Soil	MPGLAATVRRVKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFTKAPLWLDFADGSVPFWSTFAKPGVTALASNLLYPPKLRAAGAQTAYFDLYLN
Ga0307294_104294811	3300028810	Soil	VAAAVVALALVGGRGAPAQGLQANCILPSQTPVWLDFADGSVPFWQVFAK
Ga0307302_100261091	3300028814	Soil	VAAAVVALALVGGRGAPAQGLQANCILPSQTPVWLDFADGSVPFWQVFAKPGV
Ga0307302_100799973	3300028814	Soil	VKRLGVLVAAVVALALAGGKGAPAQQLQANCSLFTKTPLWLDFADGSVPFWSLFAKPGVTALASNLIFPPKLRE
Ga0307296_106295442	3300028819	Soil	VKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFGNKTPLWLDFADGSVPFWSLFAKPGVTALASNLIFPPKLREAGAQ
Ga0307310_105536062	3300028824	Soil	VKRLGVLVAAVLALALAGGKGAPAQQLQANCSLFTKTPLWLDFADGSVPFWSLFARP
Ga0307312_100742593	3300028828	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGITALASNFIYPPKL
Ga0307314_100007143	3300028872	Soil	VKRLGVLVAVALALALTGGKGAPAQQLQANCSLFGKAPLWLDFADGSVPFWNMFAKPGITALASNFIYPPKLREGRPPTSISI
Ga0307277_101075981	3300028881	Soil	VKRLGVLVAAIVSLALAGGKGAPAQQLQANCSLFDGKASPLWLDFADGSVPFWNLFAKP
Ga0307277_104412892	3300028881	Soil	VKRLGVLVAAVVSLALAGGKGAPAQQLQANCSLFGNTTPLWLDFADGSVPFWSLFAKPGVTALASN
Ga0307304_104706662	3300028885	Soil	VSPGLAATVRRVKRFGVLVAAVLALALAGGKGAPAQQLQANCSLFGGKTPLWLDFADGSVPFWNLFARPGVTALASNLIYPPKLR
Ga0102757_113555872	3300030785	Soil	VKRFGVLVVAVVALALSGGQSAPAQRLEANCSLFDAKAAPLWLDFADG
Ga0307496_100425812	3300031200	Soil	VKRLGVLVAVVVSLALAGGKGAPAQQLQANCSLFGNKTPLWLDFADGSVPFWSLFAKPGVTALASNLIF
Ga0307471_1041516401	3300032180	Hardwood Forest Soil	VKRLGVLTAIVAALALLGGTRAPAQRLQANCVLPTQTPVWLDFAPRSVAFWNLFAKPGIV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060465

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences