Metagenome Family F060398

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060398
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	56 residues
Representative Sequence	SPQDQPAANTIGSGIHTELVCKARFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP
Number of Associated Samples	108
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.72 %
% of genes near scaffold ends (potentially truncated)	84.96 %
% of genes from short scaffolds (< 2000 bps)	80.45 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.466 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.068 % of family members)
Environment Ontology (ENVO)	Unclassified (40.602 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.647 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 34.12% Coil/Unstructured: 65.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00583	Acetyltransf_1	6.02
PF04226	Transgly_assoc	4.51
PF13302	Acetyltransf_3	3.01
PF11158	DUF2938	2.26
PF00313	CSD	1.50
PF08734	GYD	1.50
PF00498	FHA	1.50
PF11954	DUF3471	1.50
PF16798	DUF5069	1.50
PF01872	RibD_C	0.75
PF11293	DUF3094	0.75
PF00903	Glyoxalase	0.75
PF06271	RDD	0.75
PF03073	TspO_MBR	0.75
PF13376	OmdA	0.75
PF01513	NAD_kinase	0.75
PF02517	Rce1-like	0.75
PF13673	Acetyltransf_10	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	4.51
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.50
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.75
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.75
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.75
COG3476	Tryptophan-rich sensory protein TspO/CrtK (mitochondrial benzodiazepine receptor homolog)	Signal transduction mechanisms [T]	0.75
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.47 %
Unclassified	root	N/A	13.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.47 %
Unclassified	root	N/A	13.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.47 %
Unclassified	root	N/A	13.53 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	45.86 %
Unclassified	root	N/A	13.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	45.86 %
Unclassified	root	N/A	13.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	24.81 %
Unclassified	root	N/A	13.53 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.81 %
Unclassified	root	N/A	13.53 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.81 %
Unclassified	root	N/A	13.53 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2.26 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.81 %
Unclassified	root	N/A	13.53 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	2.26 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.81 %
Unclassified	root	N/A	13.53 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2.26 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.81 %
Unclassified	root	N/A	13.53 %
Chthoniobacter flavus Ellin428	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	2.26 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102302763	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300000955\|JGI1027J12803_104707503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	580	Open in IMG/M
3300000956\|JGI10216J12902_113127626	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300000956\|JGI10216J12902_117504991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300002914\|JGI25617J43924_10007355	All Organisms → cellular organisms → Bacteria	3458	Open in IMG/M
3300004479\|Ga0062595_101224787	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005171\|Ga0066677_10280464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	951	Open in IMG/M
3300005172\|Ga0066683_10892976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300005177\|Ga0066690_10380842	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300005180\|Ga0066685_10030945	All Organisms → cellular organisms → Bacteria	3312	Open in IMG/M
3300005180\|Ga0066685_10947048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300005186\|Ga0066676_10183949	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300005294\|Ga0065705_10896656	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005332\|Ga0066388_107190835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300005451\|Ga0066681_10650323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300005454\|Ga0066687_10656162	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005540\|Ga0066697_10565799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	635	Open in IMG/M
3300005540\|Ga0066697_10630848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300005553\|Ga0066695_10369023	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005554\|Ga0066661_10448240	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005554\|Ga0066661_10655111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300005558\|Ga0066698_10804759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	608	Open in IMG/M
3300005560\|Ga0066670_10982023	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005569\|Ga0066705_10626244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	657	Open in IMG/M
3300005598\|Ga0066706_10420851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1063	Open in IMG/M
3300005764\|Ga0066903_105573313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	663	Open in IMG/M
3300006031\|Ga0066651_10648511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300006032\|Ga0066696_10822343	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006163\|Ga0070715_10159335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1114	Open in IMG/M
3300006175\|Ga0070712_101401445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	610	Open in IMG/M
3300006852\|Ga0075433_11410630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300006871\|Ga0075434_102507166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300007265\|Ga0099794_10169481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1113	Open in IMG/M
3300009012\|Ga0066710_102918127	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	670	Open in IMG/M
3300009012\|Ga0066710_102933728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300009137\|Ga0066709_104178767	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009137\|Ga0066709_104514813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300010303\|Ga0134082_10145975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	954	Open in IMG/M
3300010321\|Ga0134067_10217284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	708	Open in IMG/M
3300010329\|Ga0134111_10101875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1102	Open in IMG/M
3300010329\|Ga0134111_10244944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	734	Open in IMG/M
3300010333\|Ga0134080_10258805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	770	Open in IMG/M
3300010335\|Ga0134063_10353758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300010335\|Ga0134063_10626705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300010359\|Ga0126376_10150610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1863	Open in IMG/M
3300010361\|Ga0126378_12060688	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010373\|Ga0134128_11036310	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300010376\|Ga0126381_101732785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	902	Open in IMG/M
3300010396\|Ga0134126_13050809	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300010398\|Ga0126383_12174377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	641	Open in IMG/M
3300012199\|Ga0137383_10486370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	904	Open in IMG/M
3300012200\|Ga0137382_11084193	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012201\|Ga0137365_10792685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	692	Open in IMG/M
3300012202\|Ga0137363_10077598	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300012202\|Ga0137363_10575318	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300012202\|Ga0137363_10674660	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300012208\|Ga0137376_11240033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300012208\|Ga0137376_11637326	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012209\|Ga0137379_10655882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	955	Open in IMG/M
3300012210\|Ga0137378_11182278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300012285\|Ga0137370_10871516	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012350\|Ga0137372_10702340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	732	Open in IMG/M
3300012361\|Ga0137360_10480320	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300012363\|Ga0137390_10960162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300012363\|Ga0137390_11907303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300012685\|Ga0137397_10604035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	816	Open in IMG/M
3300012923\|Ga0137359_10332895	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300012923\|Ga0137359_11272666	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300012923\|Ga0137359_11403922	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012930\|Ga0137407_10160544	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300012930\|Ga0137407_11281348	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012944\|Ga0137410_10680214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	856	Open in IMG/M
3300012948\|Ga0126375_10763618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	761	Open in IMG/M
3300012948\|Ga0126375_11087287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300012955\|Ga0164298_10281082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1020	Open in IMG/M
3300012976\|Ga0134076_10193745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300012976\|Ga0134076_10385727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	622	Open in IMG/M
3300013306\|Ga0163162_12531853	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300014150\|Ga0134081_10389301	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300015193\|Ga0167668_1076034	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300015356\|Ga0134073_10064164	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300015357\|Ga0134072_10310745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300015372\|Ga0132256_100172998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2188	Open in IMG/M
3300015374\|Ga0132255_101667679	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300015374\|Ga0132255_103834872	Not Available	639	Open in IMG/M
3300017657\|Ga0134074_1324097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	565	Open in IMG/M
3300017994\|Ga0187822_10202776	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300018076\|Ga0184609_10479370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	569	Open in IMG/M
3300018468\|Ga0066662_11180058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300018482\|Ga0066669_11431568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300019885\|Ga0193747_1114949	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300020006\|Ga0193735_1003914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4779	Open in IMG/M
3300020170\|Ga0179594_10326234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300024232\|Ga0247664_1066056	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300024254\|Ga0247661_1113748	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300025929\|Ga0207664_11604520	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300025930\|Ga0207701_10165698	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300025932\|Ga0207690_11520246	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300025936\|Ga0207670_11913208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	504	Open in IMG/M
3300025942\|Ga0207689_10409750	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300026041\|Ga0207639_12209209	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300026307\|Ga0209469_1026833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1969	Open in IMG/M
3300026326\|Ga0209801_1198415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	806	Open in IMG/M
3300026327\|Ga0209266_1058947	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300026327\|Ga0209266_1268480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	541	Open in IMG/M
3300026329\|Ga0209375_1016002	All Organisms → cellular organisms → Bacteria	4443	Open in IMG/M
3300026342\|Ga0209057_1010574	All Organisms → cellular organisms → Bacteria	5765	Open in IMG/M
3300026523\|Ga0209808_1261333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300026537\|Ga0209157_1062648	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300026538\|Ga0209056_10533438	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300026540\|Ga0209376_1029038	All Organisms → cellular organisms → Bacteria	3495	Open in IMG/M
3300026540\|Ga0209376_1163115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1055	Open in IMG/M
3300027502\|Ga0209622_1030943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300028380\|Ga0268265_12005729	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300032180\|Ga0307471_100178744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2090	Open in IMG/M
3300032261\|Ga0306920_101709888	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.98%
Host-Associated	Host-Associated	9.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.47%
Plants	Host-Associated → Plants	9.02%
Aquatic	Environmental → Aquatic	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.51%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Sediment	Environmental → Aquatic → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.46%
Loam	Environmental → Terrestrial → Soil → Loam	6.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1023027633	3300000955	Soil	PAANMMGSGVHTELVCKARFSKKRDVQVGFHLIKETEGSQYVAAAWNFQAAP*
JGI1027J12803_1047075032	3300000955	Soil	TAISAQDQPAANMMGSGFHTELVCKARFSKKHDVHVAFHLIKETEGSQYIAAAWNFQAAP
JGI10216J12902_1131276263	3300000956	Soil	ANMMGSGIHTELVCKANFSKKHHVHVGLHLIKETEDSQYVVAAWNFQAEP*
JGI10216J12902_1175049912	3300000956	Soil	ANMMGSGIHTELVCKAKFSKKRNAHVGLHLIKETEGSPYIAAAWNFQAAP*
JGI25617J43924_100073555	3300002914	Grasslands Soil	LRVKTATISPQDQLAANTIDSGIHTELVCKARFSKKHDAHVGLHLIKQTEGSQCIVAAWTFQAEP*
Ga0062595_1012247872	3300004479	Soil	MLGSGIHTELVCKAKFSKKNYAHVGLHLVKETENSQYIVAAWNFQAAP*
Ga0066672_100107377	3300005167	Soil	IELVCKARFSKKHNAHVGLHLIKEAEGSQYIVAAWNFQAEP*
Ga0066677_102804642	3300005171	Soil	MMGSGIHTELVCKAKFSKKRDVHVGLHLIKETEGSQYIVAAWNFEATP*
Ga0066683_108929762	3300005172	Soil	TISPQDQPAANMMGSGIHTELVCKAKFSKKHDAHVGLHLIKETEGSQYIVAAWNFEAEP*
Ga0066690_103808421	3300005177	Soil	QDHPAAIMGSGIHTELVCKARFSKKHDAHVGLHLIKETEGSQYIVAAWNVQAEP*
Ga0066685_100309453	3300005180	Soil	KTTTISPQDQPAANTIGSGIHTELVCRAKFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0066685_109470481	3300005180	Soil	RAKTTTISPQDQPAANTMGSGIHTELVCKAKFSKKHDAHVGLHLIRQTEGSQYIVAAWNFEAEP*
Ga0066676_101839491	3300005186	Soil	YEVLRVKTTTISLQDQLAANTIGSGIHTELVCKARFSKKRNAHVGLHLIKQTEASQYIVAAWNFQAEP*
Ga0065705_108966561	3300005294	Switchgrass Rhizosphere	TTISPQDQPAANMMGSGIHTELVCKANFSKKHHAHIGLHLIKETEGSQYIVAAWNVQTAP
Ga0066388_1071908352	3300005332	Tropical Forest Soil	PQDQPAANMMGSGIHTELVCKAKFSKKADTHVGLHLIKETEGSQYIVAAWNFQANL*
Ga0066686_108783152	3300005446	Soil	LVCKARFSKKRDAHVGLHLIKQTEGSQYIVAAWNFQAEP*
Ga0066681_106503232	3300005451	Soil	GSGIHTELVCKAKFSKKHNAHVGLHLIRETEGSQYIVAAWNFQAEP*
Ga0066687_106561622	3300005454	Soil	ISPQDHPAAIMGSGIHTELVCKARFSKKHDAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0066697_105657992	3300005540	Soil	MGSGIHTELVCKARFSKKRDVHVGMHLIKETENSQYVAAAWNFEAPP*
Ga0066697_106308481	3300005540	Soil	NTIGSGIHTELVCKARFSKKRNAHVGLHLIKQSEGSQYIVAAWNFQAEP*
Ga0066695_103690231	3300005553	Soil	AANTIGSGIHTELVCKAKFSKKNDVHVGLHLIKETEGSQYIVAAWNFEAEP*
Ga0066661_104482401	3300005554	Soil	AAIMGSGIHTELVCKARFSKKHDAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0066661_106551111	3300005554	Soil	TISPQDQPAANMMGSGIHTELVCKAKFSKKRDVHVGLHLIKETEGSQYIVAAWNFEATP*
Ga0066698_108047592	3300005558	Soil	SPQDQPAANTIGSGIHTELVCKARFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0066670_109820231	3300005560	Soil	KTTMISPQDHPAAIMGSGIHTELVCKARFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0066705_106262441	3300005569	Soil	GSGIHTELVCKARFSKKRDAHVGLHLIKQTEGSQYIVAAWNFQAEP*
Ga0066691_106979311	3300005586	Soil	KARFSKKHDAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0066706_104208513	3300005598	Soil	YEVLRAKTTTISPQDQFAANTIGSGIHTELVCKAKFSKKHNAHVGLHLIRETEGSQYIVAAWNFQAEP*
Ga0066903_1055733131	3300005764	Tropical Forest Soil	AGFHTELVCKANFSKKHDVHVGFHLIKETESSPYVAAAWNFEAAP*
Ga0066651_106485111	3300006031	Soil	TTISPQDQPAANMMGSGIHTELVCKAKFSKKRDVHVGLHLIKETEGSQYIVAAWNFEAEP
Ga0066696_108223432	3300006032	Soil	LRAKTTTISPQDQFAANTIGSGIHTELVCKAKFSKKHNAHVGLHLIREAEGSQYIVAAWNFQAEP*
Ga0070715_101593351	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	YEVLRVKTTTISPQDQVAANTIGSGIHTELVCKAKFSKKLNAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0070712_1014014451	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GIHTELVCKANFSKKHHVRVGLRLIKETEGSQYVVAAWNFQAEL*
Ga0075433_114106302	3300006852	Populus Rhizosphere	VKTTTIPPQNQPVANMMGSGIYTEVVCKARFSKKHDAHVGLHLIKETEGSQYIVAAWNFQAAP*
Ga0075434_1025071662	3300006871	Populus Rhizosphere	PAANMVGSGVHTELVCKARFSKKHDVQVGFHLIKETEGSQYVAAAWNFQATP*
Ga0099794_101694811	3300007265	Vadose Zone Soil	TISPQDHPAAIMGSGIHTELVCKARFSKKHDAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0066710_1029181271	3300009012	Grasslands Soil	QDQLAANTIGSGIHTELVCKARFSKKHNAHVGLHLIKQTEGSQYIVAAWNFQAEP
Ga0066710_1029337282	3300009012	Grasslands Soil	MGSGTHTDLVCKAKFSKKHDVHVGLHLIRQTEGAQYTVAAWNFEAEP
Ga0066709_1041787671	3300009137	Grasslands Soil	VLRAKTTTISPQDQLAANTIGSGIHTELVCKAKFSKKYDAHVGLHLIKQTEGSQYIVAAWNFQAEP*
Ga0066709_1045148131	3300009137	Grasslands Soil	DQLAANTIGSGIHTELVCKARFSKKRNAHVGLHLIKQSEGSQYIVAAWNFQAEP*
Ga0114129_120507621	3300009147	Populus Rhizosphere	AKFSKKHDAHVGLHPIKETEGSQYIVAAWNFQAEP*
Ga0105243_109471411	3300009148	Miscanthus Rhizosphere	GSHTELVCKANFSKKHHAHIGLHLIKETEGSQYIVAAWNVQTAP*
Ga0134082_101459753	3300010303	Grasslands Soil	AANTIGSGIHTELVCKAKFSKKHNAHVGLHLIRDAEGSQYIVAAWNFQAEP*
Ga0134082_103315571	3300010303	Grasslands Soil	KAKFSKKHDAHVGLHLIKETEGSQYIVAAWHFEAEP*
Ga0134067_102172842	3300010321	Grasslands Soil	DQPAANTMGSGIHTELVCKAKFSKKHDAHVGLHLIRQTEGSQYIVAAWNFEAEP*
Ga0134111_101018751	3300010329	Grasslands Soil	ANMMGSGIHTELVCKAKFSKKHDAHVGLHLIKETEGSQYIVAAWNFEAEP*
Ga0134111_102449441	3300010329	Grasslands Soil	TTISPQDQPAANTIGSGIHTELVCRAKFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP
Ga0134080_102588051	3300010333	Grasslands Soil	NTIGSGIHTELVCKARFSKKRDAHVGLHLIKQTEGSQYIVAAWNFQAEP*
Ga0134063_103537582	3300010335	Grasslands Soil	ANTIGSGIHTELVCKAKFSKKHNAHVGLHLIRETEGSQYIVAAWNFQAEP*
Ga0134063_106267051	3300010335	Grasslands Soil	TTISPQDQFAANTIGSGIHTELVCKAKFSKKHNAHVGLHLIRETEGSQYIVAAWNFQAEP
Ga0126370_119750771	3300010358	Tropical Forest Soil	HTELVCKARFSKKHDVHAGLHLIKETEGSQYIVAAWNFEAAP*
Ga0126376_101506101	3300010359	Tropical Forest Soil	PAANSIGSGIHTELVCKAKFSKKHDAHVGLHLIKETEGSQYVVAAWNFQAVL*
Ga0126378_120606881	3300010361	Tropical Forest Soil	DQPAANMMGAGFHTELVCKANFSKKHDVHVGFHSIKETEASPYVAAAWNFEAAP*
Ga0126379_116338442	3300010366	Tropical Forest Soil	CKARFSKKHDVHVGFHLIKETDGSQYIVAAWNFQAAL*
Ga0134128_110363101	3300010373	Terrestrial Soil	STTISPQDQPAANMMGSGIHTQLVCKANFSKKHHVHVGLHLIKETEGSQYVVAAWNFQAEL*
Ga0126381_1017327853	3300010376	Tropical Forest Soil	VLRVKTTTISPQDQPAANTMGSGIHTELVCKAKFSKKHDVHVGLHLIKETEGSPYIVAAWNFQGEP*
Ga0134126_130508092	3300010396	Terrestrial Soil	KGYEVLRVKTTTISPQDQVAANTIGSGIHTELVCKAKFSKKRNAHVGLHLIKETEGSQYVVAAWNFQAEP*
Ga0126383_121743771	3300010398	Tropical Forest Soil	MMGSGIHTELLCKARFSRKRDAHVWLRLIKETESSPYIVAAWKFEAAP*
Ga0137383_104863702	3300012199	Vadose Zone Soil	GSGIHTELVCKAKFSKKYDAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0137382_110841931	3300012200	Vadose Zone Soil	KTTAISAQDQPAANMMGSGFHTELVCKARFSKKHDVHVAFHLIKETEGSQYIAAAWNFQAAP*
Ga0137365_107926851	3300012201	Vadose Zone Soil	TIGSGIHTELVCKARFSKKRDAHVGLHLIKQTEGSQYIVAAWNFQAEP*
Ga0137363_100775983	3300012202	Vadose Zone Soil	FGDFKGYEVLRVKTTTISPQDQLAANTIGSGIHTELVCKAKFSKKHNAHVGLHLIKETEGSQYIAAAWNFQAEP*
Ga0137363_105753182	3300012202	Vadose Zone Soil	ISPQDHPAAIMGSRIHTELVCKARFSKKHDAQVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0137363_106746602	3300012202	Vadose Zone Soil	YKVLTVKTTAISAQDQPAANMMGSGVHTELVCKARFSKKRDVQVGFHLIKETEGSQYVAAAWNFQATP*
Ga0137399_114154501	3300012203	Vadose Zone Soil	ARFSKKHDAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0137376_112400332	3300012208	Vadose Zone Soil	MMGSGVHTELVCKARFSKKRDVQVGFHLIKETEGSQYVAAAWNFQAAP*
Ga0137376_116373261	3300012208	Vadose Zone Soil	KTTAISAQDQPAANMMGSGFHTELVCKARFSKKHDVHVAFHLIKETEGSQYIAAAWNFQTAP*
Ga0137379_106558821	3300012209	Vadose Zone Soil	TPQDQLAANTIGSGIHTELVCKARFSKKHDAHVGLHLIKQTEGSQYIVAAWNFQAEP*
Ga0137378_104201881	3300012210	Vadose Zone Soil	AKFSKKHNARVGLHLIRETEGSQYMVAAWNFQAEP*
Ga0137378_111822782	3300012210	Vadose Zone Soil	EVLRAKTTTISPQDQPGANTMGSGTHTDLVCKAKFSKKHDVHVGLHLIRQTEGAQYTVAAWNFEAEP*
Ga0137370_108715162	3300012285	Vadose Zone Soil	SGIHTELVCKANFSRKHHAQVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0137372_107023402	3300012350	Vadose Zone Soil	GIHTELVCKARFSKKRDAHVGLHLIKQTEGSQYIVAAWNFQAEP*
Ga0137366_109028731	3300012354	Vadose Zone Soil	LVCKARFSKKRDAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0137371_102868561	3300012356	Vadose Zone Soil	LVCKARFSKKHVAHVGLHLIKETEGSQYIVAPWNFQAEP*
Ga0137360_104803201	3300012361	Vadose Zone Soil	ISPQDHPAAIMGSGIHTELVCKARFTKKHDAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0137390_109601621	3300012363	Vadose Zone Soil	MGSGTHTDLVCKAKFSKKHDVHVGLHLIRQTEDSQYTVAAWNFEAEP*
Ga0137390_119073031	3300012363	Vadose Zone Soil	VLSVKTTTISSQDRFAANTIGSGIHTELVCKAKFSKKHNAHVGLHLIRETKGSQYIVAAWNFQAEP*
Ga0137397_106040352	3300012685	Vadose Zone Soil	LRVKTTTISPQDQLAANTMGSGIHTELVCKARFSKKRNAHVGLHLIKQTEGSQYIVAAWNFQAEP*
Ga0137359_103328951	3300012923	Vadose Zone Soil	RVKTTTISPQDQLAANTIGSGIHTELVCKAKFSKKHNAHVGLHLIKETEGSQYIAAAWNFQAEP*
Ga0137359_112726661	3300012923	Vadose Zone Soil	NTIGSGIHTELVCKAKFSKKHNAHVGLHLIRETEGSQYMVAAWNFQAEP*
Ga0137359_114039221	3300012923	Vadose Zone Soil	NTIGSGIHTELVCKAKFSKKHNAHVGLHLIRETEGSQYIVAAWNFQAEP*
Ga0137404_119056611	3300012929	Vadose Zone Soil	KAKFSKKHNAHVGLHLIRETEGSQYIVAAWNFQAEP*
Ga0137407_101605441	3300012930	Vadose Zone Soil	TISPQDQLAANTIGSGIHTELVCKARFSKKHNAHVGLHLIKETEGSQYIVAAWNFQAEL*
Ga0137407_112813482	3300012930	Vadose Zone Soil	QAQPAVNMIGSGIHTDLVCKAKFSKKHDVHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0137410_106802141	3300012944	Vadose Zone Soil	KTTTISPQDQPGANTMGSGTHTDLVCKAKFSKKHDVHVGLHLIRQTEGAQYTVAAWNFEAEP*
Ga0126375_107636181	3300012948	Tropical Forest Soil	RANITTISPQDQPAANMMGSGIHTGLVCKANFSKKHHAHVGLHLIKETEGSQYIVAAWNVQTAP*
Ga0126375_110872872	3300012948	Tropical Forest Soil	AMAISAQDQPAANMIGSGFHTELVCKARFSKKHDVRVGLHLVKETEGSQYIVAAWNFQAEL*
Ga0164298_102810822	3300012955	Soil	TVKTTAISAQDQPAANMMGSGVHTELVCKARFSKKRDVQVGFHLIKETEGCQYVAAAWNFQAAP*
Ga0134076_101937451	3300012976	Grasslands Soil	ANTIGSGIHTELVCRAKFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0134076_103857272	3300012976	Grasslands Soil	KGYAVLRVKTTTISPQDQLAANTIGSGIHTELVCKARFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0163162_125318532	3300013306	Switchgrass Rhizosphere	TTISPQDQPAANMMGSGIHTELVCKANFSKKHHARVGLHLINETEGSQYIVAAWNVQTAP
Ga0134081_102973192	3300014150	Grasslands Soil	HTELVCKAKFSKKHDAHVRLHLIKETEGSQYIVAAWNFQAAP*
Ga0134081_103893012	3300014150	Grasslands Soil	FKGYEVLRTKTTTISSQDQPAANTIGSGIHTELVCRAKFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP*
Ga0167668_10760342	3300015193	Glacier Forefield Soil	MGSGIHTELVCKAMFSKKYNAHVGLHLIKETEASPYIVAAWNFEAEP*
Ga0134073_100641641	3300015356	Grasslands Soil	VLTVKTTAISAQDQPAANMMGSGVHTELVCKARFSKKRDVQVGFHLIKETEGSQYVAAAWNFQAAP*
Ga0134072_103107452	3300015357	Grasslands Soil	FKGYEVLRAKTTTISPQDQFAANTIGSGIHTELVCKAKFSKKHNAHVGLHLIRETEGSQYIVAAWNFQAEP*
Ga0132256_1001729981	3300015372	Arabidopsis Rhizosphere	LKTTAVSAQDQPAANMIGSGIHTELACKARFSKKHDVQVGFHLIKETEGSQYVAAAWNFQAVP*
Ga0132255_1016676791	3300015374	Arabidopsis Rhizosphere	LKTTAVSAQDQPAANMIGSGIHTELACKARFSKKRDVQVGFHLIKETEGSEYIAAAWNFQAVP*
Ga0132255_1038348721	3300015374	Arabidopsis Rhizosphere	TTISPQDQPAANMMGSGIHTELVCKASFSKKHHAQFGLHLIKETEGSQYIVAAWNVQTTP
Ga0134074_13240972	3300017657	Grasslands Soil	LAANTIGSGIHTELVCKARFSKKRDAHVGLHLIKQTEGSQYIVAAWNFQAEP
Ga0187822_102027762	3300017994	Freshwater Sediment	TISPQDQPAANMMGSGIHTELVCKAKFSKKHDAHAGLHLIKETEGSQYIVAAWNFEAPP
Ga0184609_104793701	3300018076	Groundwater Sediment	NTIGSGIHTELVCKARFSKKHDAHVGLHLIKETEGSQYIVAAWNFQAAP
Ga0066662_111800581	3300018468	Grasslands Soil	MGSGIHTELVCKARFSKKRDVHVGMHLIKETENSQYVAAAWNFEAPP
Ga0066669_114315682	3300018482	Grasslands Soil	AKTTTISPQDQPAANMMGSGIHTELVCKAKFSKKRDVHVGLHLIKETEGSQYIVAAWNFEATP
Ga0193747_11149492	3300019885	Soil	FKDYKVLGVKTTAISAQDQPAANMMGSGFHTELVCKARFSKKHDVHVAFHLIKETEGSQYIAAAWNFQAAP
Ga0193735_10039147	3300020006	Soil	LAILKGYEILRVKTTTISPQDQLAANTLGSGIHTELVCKARFSKKHDAHVGLHLIKETEGSQYIVAAWNFQAEL
Ga0193721_11664402	3300020018	Soil	ARFSKKHDVHVAFHLIKETEGSQYIAAAWNFQAAP
Ga0179594_103262341	3300020170	Vadose Zone Soil	FLASPLRVKTTTISPQDQLAANMMGSGIHTELVCKAKFSKKRNAHVGLHLIKQTEGSQYIVAAWNFEAEP
Ga0126371_116736862	3300021560	Tropical Forest Soil	IHTELVCKAKFSKKHDAHLGLHLIKETEGSQYIVAAWNVEAEP
Ga0247664_10660563	3300024232	Soil	MMGSGIHTELVCKANFSKKHHVHVGLHLIKETEGSQYVVAAWNFQAEL
Ga0247661_11137482	3300024254	Soil	FKSYDVLRVNSTTISPQDQPAANMMGSGIHTELVCKANFSKKHHVHVGLHLIKETEGSQYVVAAWNFQAEL
Ga0207664_116045202	3300025929	Agricultural Soil	VKTTTISPQDQPVANMMGSGIHTELVCKAKFSRKNYAHVGLHLIKETEGSPYIVAAWNFQAAP
Ga0207701_101656984	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DLKVKTTTISPQDQPAANMMGSGIHTELVCKANFLKKHHARVGLHLINETEGSQYIVAAWNVQTAP
Ga0207690_115202461	3300025932	Corn Rhizosphere	DYKVLTVKTRAISAQDQPAANMMGSGFHTELVCKARFSKKHDVRVAFHLIKETEGSQYSAAAWNFQAAP
Ga0207670_119132081	3300025936	Switchgrass Rhizosphere	QPAANMMGSGIHTELVCKANFSKKHHVHVGLHLIKETEGSQYVVAAWNFQAEL
Ga0207689_104097501	3300025942	Miscanthus Rhizosphere	PAANMMGSGIHTELVCKANFSKKHHARVGLHLINETEGSQYIVAAWNVQTAP
Ga0207639_122092091	3300026041	Corn Rhizosphere	SYLPQDQPAANMMGSGIHTELVCKANFSKKHHARVGLHLINETEGSQYIVAAWNVQTAP
Ga0209469_10268334	3300026307	Soil	PQDQLAANTIGSGIHTELVCKARFSKKRNAHVGLHLIKQSEGSQYIVAAWNFQAEP
Ga0209801_11984151	3300026326	Soil	GIHTELVCKARFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP
Ga0209266_10589471	3300026327	Soil	FKGYEVLRMKTTTVSPQDQPAANTIGSGIQTELVCKARFSKKRDAHVGLHLIKETEGSQYIVAAWNFQAEP
Ga0209266_12684801	3300026327	Soil	NTIGSGIHTELVCKARFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP
Ga0209375_10160028	3300026329	Soil	FKGYEVLRVKTATISPQDQLAANTIGSGIHTELVCKARFSKKRDAHVGLHLIKQTEGSQYIVAAWNFQAEP
Ga0209057_10105741	3300026342	Soil	RTKTTTISPQDQPAANTIGSGIHTELVCRAKFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP
Ga0209808_12613332	3300026523	Soil	MRAKTTTISPQDQPAANTMGSGIHTELVCKAKFSKKHDAHVGLHLIRQTEGSQYIVAAWNFEAEP
Ga0209157_10626485	3300026537	Soil	TTISLQDQLAANTIGSGIHTELVCKARFSKKRNAHVGLHLIKQTEASQYIVAAWNFQAEP
Ga0209056_105334381	3300026538	Soil	QDQFAANTMGSGIHTELICKAKFSKKHNAHVGLHLIRETDGSQYIVAAWNFQAEP
Ga0209376_10290384	3300026540	Soil	TISPQDQPAANTIGSGIHTELVCRAKFSKKHVAHVGLHLIKETEGSQYIVAAWNFQAEP
Ga0209376_11631151	3300026540	Soil	GYEVMRAKTTTISPQDQPAANTMGSGIHTELVCKAKFSKKHDAHVGLHLIRQTEGSQYIVAAWNFEAEP
Ga0209622_10309431	3300027502	Forest Soil	GYEVVRAKTTTISPQNQPAANTMGSGIHTELVCKAKFSKKHHAHIGLHLIKETEGSPYIVAAWNVEAEP
Ga0268265_120057291	3300028380	Switchgrass Rhizosphere	RSYEVLRVKTTTISPQDQPAANMMGSGIHTELVCKANFSKKHHAHIGLHLIKETEGSQYIVAAWNVQTAP
Ga0307471_1001787441	3300032180	Hardwood Forest Soil	STTISPQDQVAASTIGSGIHTELVCKARFSKKHNAHVGLRLIKQTEGSQYIVAAWNFQAA
Ga0307471_1009349261	3300032180	Hardwood Forest Soil	KAKFSKKRHAHVGLHLIKETEGSPYIVAAWNVEAEP
Ga0306920_1017098881	3300032261	Soil	DFKSYNVLRVKTTMISPQDHPAGIMGSGIHTELVCKARFSKKRDVHVGLHLIKETESSQYIVAAWNFQAEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060398

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences