NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F060313

Metagenome / Metatranscriptome Family F060313

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F060313
Family Type Metagenome / Metatranscriptome
Number of Sequences 133
Average Sequence Length 64 residues
Representative Sequence ALGGTSGIVIDNQVSNGGTNIYFSTLAPGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Number of Associated Samples 122
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.52 %
% of genes near scaffold ends (potentially truncated) 93.23 %
% of genes from short scaffolds (< 2000 bps) 85.71 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (60.150 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(10.526 % of family members)
Environment Ontology (ENVO) Unclassified
(29.323 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.895 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.
1A_all_C_02727730
2F24TB_178766362
3F14TC_1009919901
4JGI12633J13313_1048701
5JGI12659J15293_101514981
6Ga0062386_1006035752
7Ga0068946_11776761
8Ga0062388_1002663283
9Ga0066673_103702261
10Ga0066675_109518681
11Ga0066388_1045253492
12Ga0070709_114980662
13Ga0070711_1010576002
14Ga0066687_100908244
15Ga0070762_100058777
16Ga0070762_100353671
17Ga0070764_106707971
18Ga0070717_101105202
19Ga0075023_1000879232
20Ga0075029_1000885001
21Ga0075017_1016021271
22Ga0075015_1006412601
23Ga0075018_100180414
24Ga0070765_1008617871
25Ga0079221_105465231
26Ga0116218_11257172
27Ga0116121_10586992
28Ga0116135_10272013
29Ga0116215_10547891
30Ga0116216_106998281
31Ga0116101_10758682
32Ga0074046_103186981
33Ga0074044_106165812
34Ga0126376_110995962
35Ga0126372_126028071
36Ga0126377_103941251
37Ga0136449_1015660951
38Ga0138553_1401391
39Ga0138581_11565291
40Ga0137362_1000002033
41Ga0137410_104624241
42Ga0126369_111353941
43Ga0181534_108356511
44Ga0182024_101668151
45Ga0181536_102855571
46Ga0132258_115793271
47Ga0132255_1041705801
48Ga0182034_119653811
49Ga0182037_115605761
50Ga0182038_100438711
51Ga0187802_103934721
52Ga0187856_11295342
53Ga0187821_100334791
54Ga0187854_100378021
55Ga0187879_100387851
56Ga0187847_104131691
57Ga0187778_101946742
58Ga0187865_13148712
59Ga0187874_101397871
60Ga0187883_101259081
61Ga0187890_102017711
62Ga0187890_103920191
63Ga0187851_100309331
64Ga0187851_100427131
65Ga0187859_101182151
66Ga0187858_101332131
67Ga0187766_100546654
68Ga0187784_102767383
69Ga0187769_102105591
70Ga0187852_13638543
71Ga0182025_10240041
72Ga0210395_109932761
73Ga0210404_108899661
74Ga0210400_107535101
75Ga0210400_110931242
76Ga0210394_109786692
77Ga0210394_112761931
78Ga0210384_116012811
79Ga0210390_108239782
80Ga0208479_10544861
81Ga0208691_11174081
82Ga0207700_100648021
83Ga0209471_11984042
84Ga0209687_12468412
85Ga0208365_10405091
86Ga0208043_11991261
87Ga0209733_11755321
88Ga0209733_11806351
89Ga0208324_12139652
90Ga0209736_10925301
91Ga0209736_12027841
92Ga0209655_100499953
93Ga0209039_101840612
94Ga0209773_101961801
95Ga0209274_102209381
96Ga0209274_106314863
97Ga0209517_100597044
98Ga0209517_105903211
99Ga0209169_103101562
100Ga0209275_100081821
101Ga0209415_104663213
102Ga0209583_102570311
103Ga0209698_105441581
104Ga0307312_102847142
105Ga0302289_10948651
106Ga0302163_100958762
107Ga0311358_109329721
108Ga0311332_102479163
109Ga0302304_101761142
110Ga0302210_102006042
111Ga0302178_103453961
112Ga0302274_102605681
113Ga0302306_103627782
114Ga0311345_103843774
115Ga0311345_108964352
116Ga0311335_103775612
117Ga0310686_1173726441
118Ga0307476_103964581
119Ga0307476_111972911
120Ga0307475_112608631
121Ga0307478_106453981
122Ga0310909_105817112
123Ga0307479_112474032
124Ga0311301_113560091
125Ga0306920_1001641381
126Ga0335085_111069112
127Ga0335070_109357661
128Ga0335081_124534221
129Ga0335076_101817771
130Ga0316214_10016951
131Ga0334837_072636_562_783
132Ga0334810_187143_176_364
133Ga0370484_0118336_2_151
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 3.53%    β-sheet: 22.35%    Coil/Unstructured: 74.12%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055ALGGTSGIVIDNQVSNGGTNIYFSTLAPGSVNGQKCNVSGGTANPYCAVKLTQSGLQSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
60.9%39.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Bog
Peatland
Freshwater Sediment
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Peatlands Soil
Agricultural Soil
Arctic Peat Soil
Soil
Soil
Soil
Soil
Hardwood Forest Soil
Soil
Untreated Peat Soil
Tropical Peatland
Bog Forest Soil
Permafrost
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Fen
Palsa
Bog
Arabidopsis Rhizosphere
Roots
10.5%3.8%3.0%5.3%3.0%9.8%3.0%6.8%3.0%3.8%3.0%3.0%5.3%6.0%3.0%3.8%3.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A_all_C_027277302140918007SoilGVTSPSALGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNGQKCNVSGGVASPHCAVKLTQSALQ
F24TB_1787663623300000550SoilAPTACTTGSPNATCSTAPNASQGTSGIIVDNKVAGGTNIYFSTLGRGSVNGQSCAVAGGVANPYCAAKLTQSGLN*
F14TC_10099199013300000559SoilAPTACTTGSPNATCSTAPNASQGTSGIIVDNKVAGGTNIYFSTLGRGSVNGQSCAVAGGVANPFCAVKLTQSGLN*
JGI12633J13313_10487013300001098Forest SoilILSLQSGCLTAPSALGGTSGVIIDNRVLNGGSNIYFSTLGSGSVNNQNCHQPGGVANPYCAVKLTQLGLN*
JGI12659J15293_1015149813300001546Forest SoilIDNEMSNGGSNIYFSTMGPGSVNGQKCNVSGGAANPYCAVKLTQSALQ*
Ga0062386_10060357523300004152Bog Forest SoilPSALGGTSGIVIDNQLSNGGTNIYFSTLAAGSVNGQKCNVSGGTGNPYCAVKLTQSALQ*
Ga0068946_117767613300004593Peatlands SoilLGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNSQKCKVSGGTANPYCAVRLTQAGLQ*
Ga0062388_10026632833300004635Bog Forest SoilCTGTPTSSCVLAPSASGGTSGIVIDNQLSNGGDNIYFSTLAPGSVNGQKCNVSGGTANPYCAVKLTQSGLQ*
Ga0066673_1037022613300005175SoilPHALGGTSGIVVDNQVSAGGTNIYFSTLARGGVNGQNCAVSGGNANPYCAVKLTQSGLQ*
Ga0066675_1095186813300005187SoilFTAGFPAPGTCSAGNPTSTCVTAPKALGGSSGIIIDNQLSNGGTNIYFSTLAGGSVNGQNCRVSGGITTPFCAVKLTQSGLQ*
Ga0066388_10452534923300005332Tropical Forest SoilTSTASTPNCTGTPTSSCVTAPHLLGGTSGIIIDNQVSNGGTNIYFSTLAPGSVNGGNCKVTGGLSNPYCAVKLTQSGLQ*
Ga0070709_1149806623300005434Corn, Switchgrass And Miscanthus RhizosphereVTTPAALGGTSGIVIDNQLSSTGGANIYFSTLALGGSNGASCKVTGGAANPHCAIKLTQSALQ*
Ga0070711_10105760023300005439Corn, Switchgrass And Miscanthus RhizosphereITIDNLVANGGRNIYFVPLGKGSVNGGNCKVTGGTATPYCAVKLTQAGLQ*
Ga0066687_1009082443300005454SoilVTAPKALGGTSGIIIDNQLSNGGTNIYFTTLATGSVNGQNCKATGGTNAPFCAVKLTQSGLQ*
Ga0070762_1000587773300005602SoilSLTTPNCTGLPTSSCVSSPSALGGTSGIVIDNQVSNGGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ*
Ga0070762_1003536713300005602SoilAPTSSCVTSPNAIGGTSGIVIDNEVSNGGTNIYFSTRGQGSVNSQKCNVSGGAANPYCAVKLTQSALQ*
Ga0070764_1067079713300005712SoilESSSIATLLTTPTCTGAPTSSCVTSPSALGGTSGIVIDNEVSNGGTNIYFSTRGQGSVNSQKCNVSGGAANPYCAVKLTQSALQ*
Ga0070717_1011052023300006028Corn, Switchgrass And Miscanthus RhizospherePHALGGTSGIVVDNQVTAGGTNIYFSTLAPGGVNGQNCHVTGGAATPYCAVKLTQSGLQ*
Ga0075023_10008792323300006041WatershedsVTAPTALGGTSGIVVDNQLSNGGTNIYFGTLAPGSVNGQKCNVTGGLANPYCAVKLTQAGLQ*
Ga0075029_10008850013300006052WatershedsTSGIVIDNQLSNGGTNIYFTTLAVGSVNGQKCNVSGGAANPYCVVKLTQSALQ*
Ga0075017_10160212713300006059WatershedsTPTCTGAPTSSCVTTPKALGGTSGIVIDNQLSNGGTNLYFTTVAPGSVNGQNCHVSGGAGNPYCAVKLTQSALQ*
Ga0075015_10064126013300006102WatershedsNILGGTSGIVIDNQVSNGGTNIYFTTLAPGSVNGQNCNVTGGVATPYCAVKLTQAALQ*
Ga0075018_1001804143300006172WatershedsCTAGSPTSTCSTAPAGLGGTSGITVDNTVGNGGMNIYFSTVGRGSVNGQNCHVTGGTASPYCAVKLTQSGLN*
Ga0070765_10086178713300006176SoilGTSGIVIDNQVSNGGGANIYFSTTAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ*
Ga0079221_1054652313300006804Agricultural SoilIVIDNQLSNGGTNIYFSTLGLGSVNNQKCNVTGGAANPYCAVKLTQTTLQ*
Ga0116218_112571723300009522Peatlands SoilVTAPNALGGTSGIVIDNEVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVNLTQAALQ*
Ga0116121_105869923300009644PeatlandVIDNQVSNGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ*
Ga0116135_102720133300009665PeatlandCTGLPTSTCVSSPSALGGTSGIVIDNQVSNGGANIYFSTMAAGSVNGQKCNVSGGTANPYCAVKLTQSGLQ*
Ga0116215_105478913300009672Peatlands SoilLGGTSGIVIDNEVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVKLTQAALQ*
Ga0116216_1069982813300009698Peatlands SoilPKALGGTSGIVIDNQLSNGGTNIYFTTLAVGDVSGQKCPSGLTGGSANPHCAVKLTQSALQ*
Ga0116101_107586823300009759PeatlandTSGIVIDNQLSNGGTNIYFSTLANGSVNGQKCNVTGGAANPHCAVKLTQSALQ*
Ga0074046_1031869813300010339Bog Forest SoilIDNQLSNGGTNIYFSTLAAGSVNSQKCNVSGGTANPYCAVKLTQSALQ*
Ga0074044_1061658123300010343Bog Forest SoilVSGIVIDNDLSNGGTNIYFSTLAPGSVNGQNCGVPGGVANPYCAVKLTQSRLQ*
Ga0126376_1109959623300010359Tropical Forest SoilVIDNQVSSGGTNIYFSTLAPGSVNGQNYKATGGLANPYCAVKLTQSALQ*
Ga0126372_1260280713300010360Tropical Forest SoilGTASQPNCGTPPTSSCVTAPHALGGTSGIIVDNQVSNGGTNIYFSTIAAGGVNGQNCHVTGGAATPFCAVKLTQSALQ*
Ga0126377_1039412513300010362Tropical Forest SoilLGGTSGIVIDNQVSSGGTNIYFSTLAPGSVNGQNCRVTGGLANPYCAVKLTQSALQ*
Ga0136449_10156609513300010379Peatlands SoilGGTSGIVIDNQVSNGGTNIYFSTMAPGSVNSQKCNVSGGTANPYCAVRLTQAALQ*
Ga0138553_14013913300011047Peatlands SoilPNCTGTPTSSCVTAPSALGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNSQKCKVSGGTANPYCAVRLTQAGLQ*
Ga0138581_115652913300011085Peatlands SoilVTAPNALGGTSGIVIDNEVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVKLTQAALQ*
Ga0137362_10000020333300012205Vadose Zone SoilMPSCGSPPTSSCVVVPHALGGASGIVVDNQVSSGGTNLYFSTLAPGGVNGRNCQVSGGTATPYRATKLTQ*
Ga0137410_1046242413300012944Vadose Zone SoilPGRIDNQGSNGGTSIYLSTLAAGSVNGQNCRVIGGLANPYRSVTLNQAALQ*
Ga0126369_1113539413300012971Tropical Forest SoilSPPTSSCVTAPHALGGTSGIVVDNQLSNGGTNIYFSTIATGGVNGQNCHVSGGAATPFCAVKLTQSGLQ*
Ga0181534_1083565113300014168BogTAPSCSATGPTSSCVQAPPALGGVSGIVIDNDLSNGGSNIYFSTLAPGSVNGQNCSAPGGAANPYCAVKLTQSGLQ*
Ga0182024_1016681513300014501PermafrostLGGTSGIVIDNQVSSGGTNIYFSTLAAGSVNGQKCNVLGGAANPYCAVKLTQSALQ*
Ga0181536_1028555713300014638BogLGGTSGIIVDNQLSNGGTNIYFSTMADGSVSGGNCSVKSGAANPHCAVKLTQSGLN*
Ga0132258_1157932713300015371Arabidopsis RhizospherePGTCSAGNPTSTCVTTPKALGGTSGIIVDNQLSNGGTNIYFTTLATGSVNGQNCKVTGGTNAPFCAGKLTQSGLQ*
Ga0132255_10417058013300015374Arabidopsis RhizosphereSGITIDNLVANGGRNIYFVPLGKGSVNGGNCKVTGGAANPYCAVKLTQAGLQ*
Ga0182034_1196538113300016371SoilNCTSPPTSTCVTAPTALGGTSGIVIDNQLSNGGTNIYFSTLSTGSVNGQKCNVSGGTAKPYCAVKLTQSALQ
Ga0182037_1156057613300016404SoilTCVTAPKALGGTSGIVIDNQLSNGGTNIYFSTLSTGSVNGQKCNVSGGTAKPYCAVKLTQSALQ
Ga0182038_1004387113300016445SoilLSTPSCGSSATSSCVKSPVALGGTSGIVIDNQLSNGGTNIYFTTLGAGSVNAQKCNVSGGSSNPICAVKLTQSALQ
Ga0187802_1039347213300017822Freshwater SedimentSSTITGSLTTPNCTGAPTSSCVTTPSALGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNGQNCSVSGGAANPHCAVKLTQALLQ
Ga0187856_112953423300017925PeatlandIVDNQLSNGGTNIYFSTMADGSVSGGNCSVKSGAANPHCAVKLTQSGLN
Ga0187821_1003347913300017936Freshwater SedimentALGGTSGIVIDNQVTGGGTNIYFSTVAPGGVNGQNCHVGGGAATPYCAVKLTQSALQ
Ga0187854_1003780213300017938PeatlandAPTSSCVTAPSALGGTSGIVIDNEVSDGGTNIYFSTMAPGSVNGQNCSVLGGTPNPYCAVKLTQSELE
Ga0187879_1003878513300017946PeatlandSPSALGGTSGIVIDNQLSNGGTNIYFSTMAAGSVNGQQCNVSGGSATPHCAVKLTQSALQ
Ga0187847_1041316913300017948PeatlandGGVSGIVIDNAETDGGFNIYFSTLAPGSVNGQMCPSGLIGASTNPYCAVKLTQVDFTQP
Ga0187778_1019467423300017961Tropical PeatlandPNALGGTSGIVIDNDLSNGGTNLYFSTLAVGSVNGQKCNVSGGSSNPYCTVKLTQSALQ
Ga0187865_131487123300018004PeatlandSAPTCTGAPTSTCVTAPSALGGISGIVIDNQLSNGGTNIYFTTLAAGSVNGQKCNVSGGAANPYCAVKLTQSGLN
Ga0187874_1013978713300018019PeatlandSTCVTSPSALGGTSGIIVDNQLSNGGTNIYFSTMADGSVSGGNCSVKSGAANPHCAVKLTQSGLN
Ga0187883_1012590813300018037PeatlandVTAPAALGGTSGIIIDNQVSNGGTNIYFSTLAPGSVNGQNCSVPGGSADPYCAVQLSQSGLN
Ga0187890_1020177113300018044PeatlandGAPTSSCVTAPKVLGGTSGIVIDNELSNGGTNIYFSTLGTGSVNSKKCKVSGGAANPYCAVKLTQSALQ
Ga0187890_1039201913300018044PeatlandPIGATKVLGGTSASVIDNLLSNRGTNIHFSTLGQGSVNNQKCNVSGGTGNPHCAVKLNLSALQ
Ga0187851_1003093313300018046PeatlandTGPTSSCVQAPPALGGVSGIVIDNDLSNGGSNIYFSTLSPGSVNGQNCSVPGGAANPYCAVKLNQSGLR
Ga0187851_1004271313300018046PeatlandPTCVTAPAALGGVSGIVIDNFVTDGGANIYFSTLNPGSVQSGNCSVAGGLLTPYCAVKLTQVDFTQP
Ga0187859_1011821513300018047PeatlandPSALGGTSGIVIDNQVSSGGASIYFSTIAPGSVNGQKCHASGGTANPYCAVKLTQSALQ
Ga0187858_1013321313300018057PeatlandIVIDNQVSNGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Ga0187766_1005466543300018058Tropical PeatlandGGTSGIVIDNQLSNGGTNIYFSTLSAGSVNGQKCNVTGGTANPYCAVKLTQSALQ
Ga0187784_1027673833300018062Tropical PeatlandPDALGGTSGIIIDNEVSNGGTNIYFSTLAQGSVNGQKCNVSGGAANPYCAVKLTQAALQ
Ga0187769_1021055913300018086Tropical PeatlandALGGTSGIVIDNQVSNGGTNIYFSTLAPGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Ga0187852_136385433300019082PeatlandTSGIVIDNQLSNGGTNIYFTTQAAGDVGGQKCPSGLTGGSANPYCAVKLTQSGLQ
Ga0182025_102400413300019786PermafrostVTSPSILGGTSGIVIDNQLSNGGANIYFSTMAPGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0210395_1099327613300020582SoilVLGGTSGIVIDNQVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVKLTQAGLQ
Ga0210404_1088996613300021088SoilITTSLTTPNCTGLPTTSCVSSPSALGGTSGIVIDNQLSNGGTNIYFSTMAPGSVNGQKCNVTGGTANPYCAVKLTQSALQ
Ga0210400_1075351013300021170SoilVTSPGPLGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNGQKCNVSGGAANPYCAVRLTQSALQ
Ga0210400_1109312423300021170SoilTPHALGGTSGIVVDNQLSNGGTNIYFSTLAVGGVNGQKCNVSGGTANPFCAVKLTQLALQ
Ga0210394_1097866923300021420SoilPTSSCVTSPKALGGTSGIVIDNELSNGGSNIYFSTMAAGSVNGQKCNVSGGAANPYCAVKLTQSGLQ
Ga0210394_1127619313300021420SoilVSAPSALGGTSGIVIDNLVSNGGTNIYFSTLAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0210384_1160128113300021432SoilVESSTIALVDNTDRSGAPTSSCVTSKGLGKTSGIVIDNEVSNGGTNIYLSTLAPRSVNGQKCNVPGGTASPYCAVKLTQSALQ
Ga0210390_1082397823300021474SoilSALGGTSGIVIDNQVSNGGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0208479_105448613300025474Arctic Peat SoilLGGTSGIVIDNQVSNGGANIYFTTLAVGSVNAQKCPSGAPGGSANPYCAVKLTQSGLQ
Ga0208691_111740813300025612PeatlandCTGLPTSTCVSSPSALGGTSGIVIDNQVSNGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Ga0207700_1006480213300025928Corn, Switchgrass And Miscanthus RhizosphereGGTSGIVVDNQVTAGGTNIYFSTLAPGGVNGQNCHVTGGAATPYCAVKLTQSGLQ
Ga0209471_119840423300026318SoilTSGSVIDNQVSNGGMNLYFTTLAPGSVNGQNCRVAGGSANPYCAVKLTQAGLQ
Ga0209687_124684123300026322SoilGTCSAGNPTSTCVTAPKALGGTSGIIIDNQLSNGGTNIYFTTLATGSVNGQNCKATGGTNAPFCAVKLTQSGLQ
Ga0208365_104050913300027070Forest SoilSTLGGTSGIVIDNLVSNGGTNIYFSTVAPGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Ga0208043_119912613300027570Peatlands SoilTCVNAPSALGGTSGIVIDNQVSNGGTNIYFSTMAPGSVNSQKCNVSGGTANPYCAVRLTQAALQ
Ga0209733_117553213300027591Forest SoilSSGIVIDNQVSNGGTNIYFSTLATGSVNGQKCNVTGGVANPYCAVKLTQSTLQ
Ga0209733_118063513300027591Forest SoilIVDNQLSNGGTNIYFSTLAKGSVNGQKCNVAGGTANPYCAVKLTQSNLQ
Ga0208324_121396523300027604Peatlands SoilVIDNEVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVNLTQAALQ
Ga0209736_109253013300027660Forest SoilPSKLGGTSGIIVDNQLSNGGTNIYFSTLAKGSVNGQKCNVAGGTANPYCAVKLTQSNLQ
Ga0209736_120278413300027660Forest SoilCVTSPSVLEGTSGIVIDNQVSNGGTNIYFSTLAAGSVNSQKCNVSGGTANPYCAVRLTQSALQ
Ga0209655_1004999533300027767Bog Forest SoilPPAIGGVSGIIIDNEVTDGGTNIYFTTLGPGSVNGGNCSVAGGTANPYCAVKLTQSALQ
Ga0209039_1018406123300027825Bog Forest SoilSSLSTPDCLILPTSSCVTAPGALGGTSGVIIDNQVSNGGTNIYFSTLAPGSVNHQNCSVSGGAANPYCAVQLSQSGLN
Ga0209773_1019618013300027829Bog Forest SoilVIDNELSNGGTNIYFSTMAAGSVNGQKCNVSGGVANPNCAVKLTQSGLQ
Ga0209274_1022093813300027853SoilPSALGGTSGIIIDNEVSNGGTNIYFSTLAPGSVNNANCSTTDGAANPYCAVKLTQSGLN
Ga0209274_1063148633300027853SoilVTVPPAIEGVSGITIDNEVSNGGTNIYFTTLGPGSVSGGNCSVAGGLANPYCAVKL
Ga0209517_1005970443300027854Peatlands SoilLGGTSGIVIDNQVSNGGTNIYFSTMAPGSVNSQKCNVSGGTANPYCAVRLTQAALQ
Ga0209517_1059032113300027854Peatlands SoilSPSALGGTSGIVIDNELSNGGTNIYFSTMAAGSVNGQKCNVSGGTPNPYCAVKLTQSALQ
Ga0209169_1031015623300027879SoilALGGTSGIIIDNQLSNGGTNIYFSTMALGSVNGQNCKAAGGTANPYCAVKLTQAALQ
Ga0209275_1000818213300027884SoilTSLTTPNCTGLPTSSCVSSPSALGGTSGIVIDNQVSNGGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0209415_1046632133300027905Peatlands SoilFLESSTITTSLATPNCTGTPTSTCVNAPSALGGTSGIVIDNQVSNGGTNVYFSTMAPGSVNSQKCNVSGGTANPYCAVRLTQAALQ
Ga0209583_1025703113300027910WatershedsPTALGGTSGIVVDNQLSNGGTNIYFGTLAPGSVNGQKCNVTGGLANPYCAVKLTQAGLQ
Ga0209698_1054415813300027911WatershedsAPAALGGTSGIVIDNQLSNGGTNIYFTTLAVGSVNGQKCNVSGGAANPYCVVKLTQSALQ
Ga0307312_1028471423300028828SoilSPPTSTCVTTPPALGGTSGIVIDNQVTNGGTNIYFSTIARGGVNGQNCHVTGGAATPFCAVKLTQSALQ
Ga0302289_109486513300028857FenSNPPTSSCVTAPIALGGTSAIVIDNAVSGGGTNLYFTTLAPGSVNGQKCNVAGGTANPYCAVQLTQAGLQ
Ga0302163_1009587623300028868FenNCSNPPTSSCVTAPIALGGTSAIVIDNAVSGGGTNLYFTTLAPGSVNGQKCNVAGGTANPYCAVQLTQAGLQ
Ga0311358_1093297213300029915BogIDNALSNGGTNLYFSTLAVGDVSGQKCPSGVTGGSANPYCAVKLTQSALQ
Ga0311332_1024791633300029984FenDGFIESSVLTSSASTANCSNPPTSSCVTAPIALGGTSAIVIDNAVSGGGTNLYFTTLAPGSVNGQKCNVAGGTANPYCAVQLTQAGLQ
Ga0302304_1017611423300029993PalsaAPTSTCVTTPKALGGTSGIVIDNQVSNGGDNIYFSTLAVGDVSGQKCPSGVAGGSANPYCAVKLTQSALQ
Ga0302210_1020060423300029995FenPIALGGTSAIVIDNAVSGGGTNLYFTTLAPGSVNGQKCNVAGGTANPYCAVQLTQAGLQ
Ga0302178_1034539613300030013PalsaGTSGIVIDNELSNGGTNIYFSTMTAGSVNGQKCNVSGGSANPHCAVKLTQAGLQ
Ga0302274_1026056813300030041BogGTSGIVIDNALSNGGTNLYFSTLAVGDVSGQKCPSGVTGGSANPYCAVKLTQSALQ
Ga0302306_1036277823300030043PalsaSSTITTSLAAPVCTGAPTSTCVTTPKALGGTSGIVIDNQVSNGGDNIYFSTLAVGDVSGQKCPSGVAGGSANPYCAVKLTQSALQ
Ga0311345_1038437743300030688BogTCTTTPAALGGTSGIVIDNQVSNGGANIYFSTLASGSVNSQKCSISGGSANPHCAVKLTQSAFK
Ga0311345_1089643523300030688BogVTTPSALGGTSGIVIDNALSNGGTNLYFSTLAVGDVSGQKCPSGVTGGSANPYCAVKLTQSALQ
Ga0311335_1037756123300030838FenAPTASCVTAPAALGGTSGIVVDNQVSNGGANIYFSTLAPGSVNGQKCNVPGGLANPYCAVKVTQLALQ
Ga0310686_11737264413300031708SoilPSGIIVDNQLSNGGTNIYFSTMAAGSVNSQKCNVTGGTANPYCAVKLTQAGLQ
Ga0307476_1039645813300031715Hardwood Forest SoilSDGFLESSSIATLLTTPTCTGAPTSSCVTSPNAIGGTSGIVIDNEVSNGGTNIYFSTRGQGSVNSQKCNVSGGAANPYCAVKLTQSALQ
Ga0307476_1119729113300031715Hardwood Forest SoilSCTNPPTSSCVTTPHALGGTSGIIVDNQLSNGGTNIYFTTLAVGGVNGQNCKTGAKGASNNPYCAVKLTQSGLQ
Ga0307475_1126086313300031754Hardwood Forest SoilGSPTASCVTAPHKLGGTSGIIVDNQLTAGGGANIYFGTLAPGSVNGQKCNVAGGSANPYCAVKLTQSALQ
Ga0307478_1064539813300031823Hardwood Forest SoilSCVSAPSALGGTSGIVIDNLVSNGGTNIYFSTLAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0310909_1058171123300031947SoilTCVTAPTALGGTSGIVIDNQLSNGGTNIYFSTLSTGSVNGQKCNVSGGTAKPYCAVKLTQSALQ
Ga0307479_1124740323300031962Hardwood Forest SoilKITSSLTTPNCVGTPTSSCVTSPSALGGTSGIVIDNQVSNGGTNIYFSTMAPGSVNGQKCNVPSGTANPYCAVRLTQSALQ
Ga0311301_1135600913300032160Peatlands SoilTCTGAPTSSCVTAPKALGGTSGIVIDNQLSNGGTNIYFTTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0306920_10016413813300032261SoilNCTSPPTSTCVTAPTALGGTSGIVIDNQLSNGGTNIYFSTLSAGSVNGQNCKVSGGTATPYCAVKLTQSALQ
Ga0335085_1110691123300032770SoilGGASPTSTCVKVAAALQGTSGITIDNLVANGGRNIYFVPLGKGSVNGGNCRVSGGATTPYCAVKLTQAGLQ
Ga0335070_1093576613300032829SoilTPTEGYVQSSTIKSSLSTPSCGASPTASCVKAPASLGGTSGIVIDNQVSNGGTNIYFTTLGVGSVNSQKCNVTGGSANPYCAVKLTQSGLQ
Ga0335081_1245342213300032892SoilAALGGTSGIIIDNLLSNGGTNIYFTTLAVGSVNGQKCNVSGGSANPYCAVKLTQSALN
Ga0335076_1018177713300032955SoilGIVIDNQLSNGGTNIYFSTLAPGSVNGQNCHVSGGATTPYCIVKLTQSALQ
Ga0316214_100169513300033545RootsTPNCTTTATSTCVTAPDALGGTSGIIVDNQLSNGGTNIYFSTMAAGSVNGQNCHATGGTATPYCAVKLTQAGLQ
Ga0334837_072636_562_7833300033823SoilTAGAPTSSCVTAPSALGGTSGIVIDNEVPDGGTNIYFSTLAVGSVNGGKCPSGLTGGSLNPYCAVKLTQSGLE
Ga0334810_187143_176_3643300033890SoilMKAPKALGGTSGIVVDNQVSNGGTNIYFSTLAPGSVNNQKCNVSGGAANPYCAVKVTQSGLN
Ga0370484_0118336_2_1513300034125Untreated Peat SoilVIDNELSNGGTNIYFSTLAVGSVNGQKCNVSGGAANPYCAVKLTQSALQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.