Metagenome / Metatranscriptome Family F060313

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060313
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	64 residues
Representative Sequence	ALGGTSGIVIDNQVSNGGTNIYFSTLAPGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Number of Associated Samples	122
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.52 %
% of genes near scaffold ends (potentially truncated)	93.23 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.150 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (10.526 % of family members)
Environment Ontology (ENVO)	Unclassified (29.323 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.895 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.53% β-sheet: 22.35% Coil/Unstructured: 74.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF13662	Toprim_4	4.51
PF00069	Pkinase	3.76
PF02576	RimP_N	3.01
PF00793	DAHP_synth_1	2.26
PF07676	PD40	2.26
PF13561	adh_short_C2	1.50
PF00196	GerE	1.50
PF09989	DUF2229	1.50
PF03460	NIR_SIR_ferr	1.50
PF02575	YbaB_DNA_bd	1.50
PF01148	CTP_transf_1	0.75
PF13185	GAF_2	0.75
PF09286	Pro-kuma_activ	0.75
PF00037	Fer4	0.75
PF08529	NusA_N	0.75
PF00512	HisKA	0.75
PF02518	HATPase_c	0.75
PF13505	OMP_b-brl	0.75
PF04073	tRNA_edit	0.75
PF00361	Proton_antipo_M	0.75
PF04760	IF2_N	0.75
PF07081	DUF1349	0.75
PF00691	OmpA	0.75
PF14905	OMP_b-brl_3	0.75
PF16640	Big_3_5	0.75
PF00563	EAL	0.75
PF04932	Wzy_C	0.75
PF05591	T6SS_VipA	0.75
PF00266	Aminotran_5	0.75
PF07238	PilZ	0.75
PF07978	NIPSNAP	0.75
PF07681	DoxX	0.75
PF05235	CHAD	0.75
PF02627	CMD	0.75
PF00861	Ribosomal_L18p	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	15.04
COG0779	Ribosome maturation factor RimP	Translation, ribosomal structure and biogenesis [J]	3.01
COG0718	DNA-binding nucleoid-associated protein YbaB/EfbC	Transcription [K]	1.50
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.75
COG0256	Ribosomal protein L18	Translation, ribosomal structure and biogenesis [J]	0.75
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.75
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.75
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.75
COG3516	Predicted component TssA of the type VI protein secretion system	Intracellular trafficking, secretion, and vesicular transport [U]	0.75
COG3506	Regulation of enolase protein 1 (function unknown), concanavalin A-like superfamily	Function unknown [S]	0.75
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.75
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.75
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.75
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.75
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.75
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.90 %
Unclassified	root	N/A	39.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.90 %
Unclassified	root	N/A	39.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.15 %
Unclassified	root	N/A	39.10 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.60 %
Unclassified	root	N/A	39.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.50 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.03 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.03 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.50 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.50 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.75 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.75 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.75 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.50 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.75 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.75 %
Caballeronia sordidicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	0.75 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.50 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	0.75 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.75 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.75 %
Caballeronia sordidicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.50 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Eurotiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes	0.75 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.75 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.75 %
Caballeronia sordidicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.50 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Eurotiomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae	0.75 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.75 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.75 %
Caballeronia sordidicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.78 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.50 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Onygenales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Onygenales	0.75 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.75 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.75 %
Caballeronia sordidicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig5794	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300000550\|F24TB_17876636	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300000559\|F14TC_100991990	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300001098\|JGI12633J13313_104870	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300001546\|JGI12659J15293_10151498	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300004152\|Ga0062386_100603575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300004593\|Ga0068946_1177676	Not Available	612	Open in IMG/M
3300004635\|Ga0062388_100266328	All Organisms → cellular organisms → Bacteria → Acidobacteria	1406	Open in IMG/M
3300005175\|Ga0066673_10370226	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300005187\|Ga0066675_10951868	Not Available	647	Open in IMG/M
3300005332\|Ga0066388_104525349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300005434\|Ga0070709_11498066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	548	Open in IMG/M
3300005439\|Ga0070711_101057600	Not Available	698	Open in IMG/M
3300005454\|Ga0066687_10090824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1521	Open in IMG/M
3300005602\|Ga0070762_10005877	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5963	Open in IMG/M
3300005602\|Ga0070762_10035367	All Organisms → cellular organisms → Bacteria → Acidobacteria	2696	Open in IMG/M
3300005712\|Ga0070764_10670797	Not Available	637	Open in IMG/M
3300006028\|Ga0070717_10110520	All Organisms → cellular organisms → Bacteria → Acidobacteria	2344	Open in IMG/M
3300006041\|Ga0075023_100087923	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1052	Open in IMG/M
3300006052\|Ga0075029_100088500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1845	Open in IMG/M
3300006059\|Ga0075017_101602127	Not Available	514	Open in IMG/M
3300006102\|Ga0075015_100641260	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300006172\|Ga0075018_10018041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2703	Open in IMG/M
3300006176\|Ga0070765_100861787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300006804\|Ga0079221_10546523	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Onygenales	765	Open in IMG/M
3300009522\|Ga0116218_1125717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1166	Open in IMG/M
3300009644\|Ga0116121_1058699	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300009665\|Ga0116135_1027201	All Organisms → cellular organisms → Bacteria → Acidobacteria	1958	Open in IMG/M
3300009672\|Ga0116215_1054789	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300009698\|Ga0116216_10699828	Not Available	609	Open in IMG/M
3300009759\|Ga0116101_1075868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300010339\|Ga0074046_10318698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	952	Open in IMG/M
3300010343\|Ga0074044_10616581	Not Available	708	Open in IMG/M
3300010359\|Ga0126376_11099596	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300010360\|Ga0126372_12602807	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300010362\|Ga0126377_10394125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1394	Open in IMG/M
3300010379\|Ga0136449_101566095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300011047\|Ga0138553_140139	Not Available	662	Open in IMG/M
3300011085\|Ga0138581_1156529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300012205\|Ga0137362_10000020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	56467	Open in IMG/M
3300012944\|Ga0137410_10462424	All Organisms → cellular organisms → Bacteria → Acidobacteria	1032	Open in IMG/M
3300012971\|Ga0126369_11135394	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300014168\|Ga0181534_10835651	Not Available	547	Open in IMG/M
3300014501\|Ga0182024_10166815	All Organisms → cellular organisms → Bacteria	3064	Open in IMG/M
3300014638\|Ga0181536_10285557	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300015371\|Ga0132258_11579327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1656	Open in IMG/M
3300015374\|Ga0132255_104170580	Not Available	613	Open in IMG/M
3300016371\|Ga0182034_11965381	Not Available	517	Open in IMG/M
3300016404\|Ga0182037_11560576	Not Available	586	Open in IMG/M
3300016445\|Ga0182038_10043871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2932	Open in IMG/M
3300017822\|Ga0187802_10393472	Not Available	548	Open in IMG/M
3300017925\|Ga0187856_1129534	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300017936\|Ga0187821_10033479	Not Available	1818	Open in IMG/M
3300017938\|Ga0187854_10037802	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300017946\|Ga0187879_10038785	All Organisms → cellular organisms → Bacteria	2847	Open in IMG/M
3300017961\|Ga0187778_10194674	Not Available	1291	Open in IMG/M
3300018004\|Ga0187865_1314871	Not Available	515	Open in IMG/M
3300018019\|Ga0187874_10139787	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300018037\|Ga0187883_10125908	All Organisms → cellular organisms → Bacteria → Acidobacteria	1324	Open in IMG/M
3300018044\|Ga0187890_10201771	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300018044\|Ga0187890_10392019	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300018046\|Ga0187851_10030933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3648	Open in IMG/M
3300018046\|Ga0187851_10042713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3004	Open in IMG/M
3300018047\|Ga0187859_10118215	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300018057\|Ga0187858_10133213	All Organisms → cellular organisms → Bacteria → Acidobacteria	1668	Open in IMG/M
3300018058\|Ga0187766_10054665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2354	Open in IMG/M
3300018062\|Ga0187784_10276738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1364	Open in IMG/M
3300018086\|Ga0187769_10210559	Not Available	1441	Open in IMG/M
3300019082\|Ga0187852_1363854	Not Available	568	Open in IMG/M
3300019786\|Ga0182025_1024004	Not Available	853	Open in IMG/M
3300020582\|Ga0210395_10993276	Not Available	622	Open in IMG/M
3300021088\|Ga0210404_10889966	Not Available	509	Open in IMG/M
3300021170\|Ga0210400_10753510	Not Available	799	Open in IMG/M
3300021170\|Ga0210400_11093124	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300021420\|Ga0210394_10978669	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300021420\|Ga0210394_11276193	Not Available	628	Open in IMG/M
3300021432\|Ga0210384_11601281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	557	Open in IMG/M
3300021474\|Ga0210390_10823978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300025474\|Ga0208479_1054486	Not Available	785	Open in IMG/M
3300025612\|Ga0208691_1117408	Not Available	599	Open in IMG/M
3300025928\|Ga0207700_10064802	All Organisms → cellular organisms → Bacteria → Acidobacteria	2785	Open in IMG/M
3300026318\|Ga0209471_1198404	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300026322\|Ga0209687_1246841	Not Available	553	Open in IMG/M
3300027070\|Ga0208365_1040509	Not Available	620	Open in IMG/M
3300027570\|Ga0208043_1199126	Not Available	507	Open in IMG/M
3300027591\|Ga0209733_1175532	Not Available	510	Open in IMG/M
3300027591\|Ga0209733_1180635	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300027604\|Ga0208324_1213965	Not Available	508	Open in IMG/M
3300027660\|Ga0209736_1092530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300027660\|Ga0209736_1202784	Not Available	514	Open in IMG/M
3300027767\|Ga0209655_10049995	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300027825\|Ga0209039_10184061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300027829\|Ga0209773_10196180	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300027853\|Ga0209274_10220938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300027853\|Ga0209274_10631486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	553	Open in IMG/M
3300027854\|Ga0209517_10059704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2793	Open in IMG/M
3300027854\|Ga0209517_10590321	Not Available	590	Open in IMG/M
3300027879\|Ga0209169_10310156	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300027884\|Ga0209275_10008182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4412	Open in IMG/M
3300027905\|Ga0209415_10466321	Not Available	988	Open in IMG/M
3300027910\|Ga0209583_10257031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	773	Open in IMG/M
3300027911\|Ga0209698_10544158	Not Available	896	Open in IMG/M
3300028828\|Ga0307312_10284714	Not Available	1075	Open in IMG/M
3300028857\|Ga0302289_1094865	Not Available	688	Open in IMG/M
3300028868\|Ga0302163_10095876	Not Available	751	Open in IMG/M
3300029915\|Ga0311358_10932972	Not Available	605	Open in IMG/M
3300029984\|Ga0311332_10247916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1352	Open in IMG/M
3300029993\|Ga0302304_10176114	Not Available	799	Open in IMG/M
3300029995\|Ga0302210_10200604	Not Available	560	Open in IMG/M
3300030013\|Ga0302178_10345396	Not Available	675	Open in IMG/M
3300030041\|Ga0302274_10260568	Not Available	823	Open in IMG/M
3300030043\|Ga0302306_10362778	Not Available	554	Open in IMG/M
3300030688\|Ga0311345_10384377	Not Available	1269	Open in IMG/M
3300030688\|Ga0311345_10896435	Not Available	681	Open in IMG/M
3300030838\|Ga0311335_10377561	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300031708\|Ga0310686_117372644	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031715\|Ga0307476_10396458	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300031715\|Ga0307476_11197291	Not Available	556	Open in IMG/M
3300031754\|Ga0307475_11260863	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300031823\|Ga0307478_10645398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	886	Open in IMG/M
3300031947\|Ga0310909_10581711	Not Available	936	Open in IMG/M
3300031962\|Ga0307479_11247403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300032160\|Ga0311301_11356009	Not Available	892	Open in IMG/M
3300032261\|Ga0306920_100164138	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	3311	Open in IMG/M
3300032770\|Ga0335085_11106911	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300032829\|Ga0335070_10935766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300032892\|Ga0335081_12453422	Not Available	540	Open in IMG/M
3300032955\|Ga0335076_10181777	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300033545\|Ga0316214_1001695	All Organisms → cellular organisms → Bacteria → Acidobacteria	2621	Open in IMG/M
3300033823\|Ga0334837_072636	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300033890\|Ga0334810_187143	Not Available	502	Open in IMG/M
3300034125\|Ga0370484_0118336	Not Available	699	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.74%
Host-Associated	Host-Associated	2.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.18%
Aquatic	Environmental → Aquatic	25.56%
Plants	Host-Associated → Plants	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.65%
Freshwater	Environmental → Aquatic → Freshwater	20.30%
Peat	Environmental → Terrestrial → Peat	10.53%
Sediment	Environmental → Aquatic → Sediment	5.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.50%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.30%
Loam	Environmental → Terrestrial → Soil → Loam	17.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.01%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.02%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.26%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.01%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.01%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.01%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.26%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.50%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.50%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001098	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004593	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011047	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011085	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028857	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_2	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029995	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_2	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_02727730	2140918007	Soil	GVTSPSALGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNGQKCNVSGGVASPHCAVKLTQSALQ
F24TB_178766362	3300000550	Soil	APTACTTGSPNATCSTAPNASQGTSGIIVDNKVAGGTNIYFSTLGRGSVNGQSCAVAGGVANPYCAAKLTQSGLN*
F14TC_1009919901	3300000559	Soil	APTACTTGSPNATCSTAPNASQGTSGIIVDNKVAGGTNIYFSTLGRGSVNGQSCAVAGGVANPFCAVKLTQSGLN*
JGI12633J13313_1048701	3300001098	Forest Soil	ILSLQSGCLTAPSALGGTSGVIIDNRVLNGGSNIYFSTLGSGSVNNQNCHQPGGVANPYCAVKLTQLGLN*
JGI12659J15293_101514981	3300001546	Forest Soil	IDNEMSNGGSNIYFSTMGPGSVNGQKCNVSGGAANPYCAVKLTQSALQ*
Ga0062386_1006035752	3300004152	Bog Forest Soil	PSALGGTSGIVIDNQLSNGGTNIYFSTLAAGSVNGQKCNVSGGTGNPYCAVKLTQSALQ*
Ga0068946_11776761	3300004593	Peatlands Soil	LGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNSQKCKVSGGTANPYCAVRLTQAGLQ*
Ga0062388_1002663283	3300004635	Bog Forest Soil	CTGTPTSSCVLAPSASGGTSGIVIDNQLSNGGDNIYFSTLAPGSVNGQKCNVSGGTANPYCAVKLTQSGLQ*
Ga0066673_103702261	3300005175	Soil	PHALGGTSGIVVDNQVSAGGTNIYFSTLARGGVNGQNCAVSGGNANPYCAVKLTQSGLQ*
Ga0066675_109518681	3300005187	Soil	FTAGFPAPGTCSAGNPTSTCVTAPKALGGSSGIIIDNQLSNGGTNIYFSTLAGGSVNGQNCRVSGGITTPFCAVKLTQSGLQ*
Ga0066388_1045253492	3300005332	Tropical Forest Soil	TSTASTPNCTGTPTSSCVTAPHLLGGTSGIIIDNQVSNGGTNIYFSTLAPGSVNGGNCKVTGGLSNPYCAVKLTQSGLQ*
Ga0070709_114980662	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTTPAALGGTSGIVIDNQLSSTGGANIYFSTLALGGSNGASCKVTGGAANPHCAIKLTQSALQ*
Ga0070711_1010576002	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ITIDNLVANGGRNIYFVPLGKGSVNGGNCKVTGGTATPYCAVKLTQAGLQ*
Ga0066687_100908244	3300005454	Soil	VTAPKALGGTSGIIIDNQLSNGGTNIYFTTLATGSVNGQNCKATGGTNAPFCAVKLTQSGLQ*
Ga0070762_100058777	3300005602	Soil	SLTTPNCTGLPTSSCVSSPSALGGTSGIVIDNQVSNGGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ*
Ga0070762_100353671	3300005602	Soil	APTSSCVTSPNAIGGTSGIVIDNEVSNGGTNIYFSTRGQGSVNSQKCNVSGGAANPYCAVKLTQSALQ*
Ga0070764_106707971	3300005712	Soil	ESSSIATLLTTPTCTGAPTSSCVTSPSALGGTSGIVIDNEVSNGGTNIYFSTRGQGSVNSQKCNVSGGAANPYCAVKLTQSALQ*
Ga0070717_101105202	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PHALGGTSGIVVDNQVTAGGTNIYFSTLAPGGVNGQNCHVTGGAATPYCAVKLTQSGLQ*
Ga0075023_1000879232	3300006041	Watersheds	VTAPTALGGTSGIVVDNQLSNGGTNIYFGTLAPGSVNGQKCNVTGGLANPYCAVKLTQAGLQ*
Ga0075029_1000885001	3300006052	Watersheds	TSGIVIDNQLSNGGTNIYFTTLAVGSVNGQKCNVSGGAANPYCVVKLTQSALQ*
Ga0075017_1016021271	3300006059	Watersheds	TPTCTGAPTSSCVTTPKALGGTSGIVIDNQLSNGGTNLYFTTVAPGSVNGQNCHVSGGAGNPYCAVKLTQSALQ*
Ga0075015_1006412601	3300006102	Watersheds	NILGGTSGIVIDNQVSNGGTNIYFTTLAPGSVNGQNCNVTGGVATPYCAVKLTQAALQ*
Ga0075018_100180414	3300006172	Watersheds	CTAGSPTSTCSTAPAGLGGTSGITVDNTVGNGGMNIYFSTVGRGSVNGQNCHVTGGTASPYCAVKLTQSGLN*
Ga0070765_1008617871	3300006176	Soil	GTSGIVIDNQVSNGGGANIYFSTTAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ*
Ga0079221_105465231	3300006804	Agricultural Soil	IVIDNQLSNGGTNIYFSTLGLGSVNNQKCNVTGGAANPYCAVKLTQTTLQ*
Ga0116218_11257172	3300009522	Peatlands Soil	VTAPNALGGTSGIVIDNEVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVNLTQAALQ*
Ga0116121_10586992	3300009644	Peatland	VIDNQVSNGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ*
Ga0116135_10272013	3300009665	Peatland	CTGLPTSTCVSSPSALGGTSGIVIDNQVSNGGANIYFSTMAAGSVNGQKCNVSGGTANPYCAVKLTQSGLQ*
Ga0116215_10547891	3300009672	Peatlands Soil	LGGTSGIVIDNEVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVKLTQAALQ*
Ga0116216_106998281	3300009698	Peatlands Soil	PKALGGTSGIVIDNQLSNGGTNIYFTTLAVGDVSGQKCPSGLTGGSANPHCAVKLTQSALQ*
Ga0116101_10758682	3300009759	Peatland	TSGIVIDNQLSNGGTNIYFSTLANGSVNGQKCNVTGGAANPHCAVKLTQSALQ*
Ga0074046_103186981	3300010339	Bog Forest Soil	IDNQLSNGGTNIYFSTLAAGSVNSQKCNVSGGTANPYCAVKLTQSALQ*
Ga0074044_106165812	3300010343	Bog Forest Soil	VSGIVIDNDLSNGGTNIYFSTLAPGSVNGQNCGVPGGVANPYCAVKLTQSRLQ*
Ga0126376_110995962	3300010359	Tropical Forest Soil	VIDNQVSSGGTNIYFSTLAPGSVNGQNYKATGGLANPYCAVKLTQSALQ*
Ga0126372_126028071	3300010360	Tropical Forest Soil	GTASQPNCGTPPTSSCVTAPHALGGTSGIIVDNQVSNGGTNIYFSTIAAGGVNGQNCHVTGGAATPFCAVKLTQSALQ*
Ga0126377_103941251	3300010362	Tropical Forest Soil	LGGTSGIVIDNQVSSGGTNIYFSTLAPGSVNGQNCRVTGGLANPYCAVKLTQSALQ*
Ga0136449_1015660951	3300010379	Peatlands Soil	GGTSGIVIDNQVSNGGTNIYFSTMAPGSVNSQKCNVSGGTANPYCAVRLTQAALQ*
Ga0138553_1401391	3300011047	Peatlands Soil	PNCTGTPTSSCVTAPSALGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNSQKCKVSGGTANPYCAVRLTQAGLQ*
Ga0138581_11565291	3300011085	Peatlands Soil	VTAPNALGGTSGIVIDNEVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVKLTQAALQ*
Ga0137362_1000002033	3300012205	Vadose Zone Soil	MPSCGSPPTSSCVVVPHALGGASGIVVDNQVSSGGTNLYFSTLAPGGVNGRNCQVSGGTATPYRATKLTQ*
Ga0137410_104624241	3300012944	Vadose Zone Soil	PGRIDNQGSNGGTSIYLSTLAAGSVNGQNCRVIGGLANPYRSVTLNQAALQ*
Ga0126369_111353941	3300012971	Tropical Forest Soil	SPPTSSCVTAPHALGGTSGIVVDNQLSNGGTNIYFSTIATGGVNGQNCHVSGGAATPFCAVKLTQSGLQ*
Ga0181534_108356511	3300014168	Bog	TAPSCSATGPTSSCVQAPPALGGVSGIVIDNDLSNGGSNIYFSTLAPGSVNGQNCSAPGGAANPYCAVKLTQSGLQ*
Ga0182024_101668151	3300014501	Permafrost	LGGTSGIVIDNQVSSGGTNIYFSTLAAGSVNGQKCNVLGGAANPYCAVKLTQSALQ*
Ga0181536_102855571	3300014638	Bog	LGGTSGIIVDNQLSNGGTNIYFSTMADGSVSGGNCSVKSGAANPHCAVKLTQSGLN*
Ga0132258_115793271	3300015371	Arabidopsis Rhizosphere	PGTCSAGNPTSTCVTTPKALGGTSGIIVDNQLSNGGTNIYFTTLATGSVNGQNCKVTGGTNAPFCAGKLTQSGLQ*
Ga0132255_1041705801	3300015374	Arabidopsis Rhizosphere	SGITIDNLVANGGRNIYFVPLGKGSVNGGNCKVTGGAANPYCAVKLTQAGLQ*
Ga0182034_119653811	3300016371	Soil	NCTSPPTSTCVTAPTALGGTSGIVIDNQLSNGGTNIYFSTLSTGSVNGQKCNVSGGTAKPYCAVKLTQSALQ
Ga0182037_115605761	3300016404	Soil	TCVTAPKALGGTSGIVIDNQLSNGGTNIYFSTLSTGSVNGQKCNVSGGTAKPYCAVKLTQSALQ
Ga0182038_100438711	3300016445	Soil	LSTPSCGSSATSSCVKSPVALGGTSGIVIDNQLSNGGTNIYFTTLGAGSVNAQKCNVSGGSSNPICAVKLTQSALQ
Ga0187802_103934721	3300017822	Freshwater Sediment	SSTITGSLTTPNCTGAPTSSCVTTPSALGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNGQNCSVSGGAANPHCAVKLTQALLQ
Ga0187856_11295342	3300017925	Peatland	IVDNQLSNGGTNIYFSTMADGSVSGGNCSVKSGAANPHCAVKLTQSGLN
Ga0187821_100334791	3300017936	Freshwater Sediment	ALGGTSGIVIDNQVTGGGTNIYFSTVAPGGVNGQNCHVGGGAATPYCAVKLTQSALQ
Ga0187854_100378021	3300017938	Peatland	APTSSCVTAPSALGGTSGIVIDNEVSDGGTNIYFSTMAPGSVNGQNCSVLGGTPNPYCAVKLTQSELE
Ga0187879_100387851	3300017946	Peatland	SPSALGGTSGIVIDNQLSNGGTNIYFSTMAAGSVNGQQCNVSGGSATPHCAVKLTQSALQ
Ga0187847_104131691	3300017948	Peatland	GGVSGIVIDNAETDGGFNIYFSTLAPGSVNGQMCPSGLIGASTNPYCAVKLTQVDFTQP
Ga0187778_101946742	3300017961	Tropical Peatland	PNALGGTSGIVIDNDLSNGGTNLYFSTLAVGSVNGQKCNVSGGSSNPYCTVKLTQSALQ
Ga0187865_13148712	3300018004	Peatland	SAPTCTGAPTSTCVTAPSALGGISGIVIDNQLSNGGTNIYFTTLAAGSVNGQKCNVSGGAANPYCAVKLTQSGLN
Ga0187874_101397871	3300018019	Peatland	STCVTSPSALGGTSGIIVDNQLSNGGTNIYFSTMADGSVSGGNCSVKSGAANPHCAVKLTQSGLN
Ga0187883_101259081	3300018037	Peatland	VTAPAALGGTSGIIIDNQVSNGGTNIYFSTLAPGSVNGQNCSVPGGSADPYCAVQLSQSGLN
Ga0187890_102017711	3300018044	Peatland	GAPTSSCVTAPKVLGGTSGIVIDNELSNGGTNIYFSTLGTGSVNSKKCKVSGGAANPYCAVKLTQSALQ
Ga0187890_103920191	3300018044	Peatland	PIGATKVLGGTSASVIDNLLSNRGTNIHFSTLGQGSVNNQKCNVSGGTGNPHCAVKLNLSALQ
Ga0187851_100309331	3300018046	Peatland	TGPTSSCVQAPPALGGVSGIVIDNDLSNGGSNIYFSTLSPGSVNGQNCSVPGGAANPYCAVKLNQSGLR
Ga0187851_100427131	3300018046	Peatland	PTCVTAPAALGGVSGIVIDNFVTDGGANIYFSTLNPGSVQSGNCSVAGGLLTPYCAVKLTQVDFTQP
Ga0187859_101182151	3300018047	Peatland	PSALGGTSGIVIDNQVSSGGASIYFSTIAPGSVNGQKCHASGGTANPYCAVKLTQSALQ
Ga0187858_101332131	3300018057	Peatland	IVIDNQVSNGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Ga0187766_100546654	3300018058	Tropical Peatland	GGTSGIVIDNQLSNGGTNIYFSTLSAGSVNGQKCNVTGGTANPYCAVKLTQSALQ
Ga0187784_102767383	3300018062	Tropical Peatland	PDALGGTSGIIIDNEVSNGGTNIYFSTLAQGSVNGQKCNVSGGAANPYCAVKLTQAALQ
Ga0187769_102105591	3300018086	Tropical Peatland	ALGGTSGIVIDNQVSNGGTNIYFSTLAPGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Ga0187852_13638543	3300019082	Peatland	TSGIVIDNQLSNGGTNIYFTTQAAGDVGGQKCPSGLTGGSANPYCAVKLTQSGLQ
Ga0182025_10240041	3300019786	Permafrost	VTSPSILGGTSGIVIDNQLSNGGANIYFSTMAPGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0210395_109932761	3300020582	Soil	VLGGTSGIVIDNQVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVKLTQAGLQ
Ga0210404_108899661	3300021088	Soil	ITTSLTTPNCTGLPTTSCVSSPSALGGTSGIVIDNQLSNGGTNIYFSTMAPGSVNGQKCNVTGGTANPYCAVKLTQSALQ
Ga0210400_107535101	3300021170	Soil	VTSPGPLGGTSGIVIDNQVSNGGTNIYFSTLAAGSVNGQKCNVSGGAANPYCAVRLTQSALQ
Ga0210400_110931242	3300021170	Soil	TPHALGGTSGIVVDNQLSNGGTNIYFSTLAVGGVNGQKCNVSGGTANPFCAVKLTQLALQ
Ga0210394_109786692	3300021420	Soil	PTSSCVTSPKALGGTSGIVIDNELSNGGSNIYFSTMAAGSVNGQKCNVSGGAANPYCAVKLTQSGLQ
Ga0210394_112761931	3300021420	Soil	VSAPSALGGTSGIVIDNLVSNGGTNIYFSTLAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0210384_116012811	3300021432	Soil	VESSTIALVDNTDRSGAPTSSCVTSKGLGKTSGIVIDNEVSNGGTNIYLSTLAPRSVNGQKCNVPGGTASPYCAVKLTQSALQ
Ga0210390_108239782	3300021474	Soil	SALGGTSGIVIDNQVSNGGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0208479_10544861	3300025474	Arctic Peat Soil	LGGTSGIVIDNQVSNGGANIYFTTLAVGSVNAQKCPSGAPGGSANPYCAVKLTQSGLQ
Ga0208691_11174081	3300025612	Peatland	CTGLPTSTCVSSPSALGGTSGIVIDNQVSNGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Ga0207700_100648021	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GGTSGIVVDNQVTAGGTNIYFSTLAPGGVNGQNCHVTGGAATPYCAVKLTQSGLQ
Ga0209471_11984042	3300026318	Soil	TSGSVIDNQVSNGGMNLYFTTLAPGSVNGQNCRVAGGSANPYCAVKLTQAGLQ
Ga0209687_12468412	3300026322	Soil	GTCSAGNPTSTCVTAPKALGGTSGIIIDNQLSNGGTNIYFTTLATGSVNGQNCKATGGTNAPFCAVKLTQSGLQ
Ga0208365_10405091	3300027070	Forest Soil	STLGGTSGIVIDNLVSNGGTNIYFSTVAPGSVNGQKCNVSGGTANPYCAVKLTQSGLQ
Ga0208043_11991261	3300027570	Peatlands Soil	TCVNAPSALGGTSGIVIDNQVSNGGTNIYFSTMAPGSVNSQKCNVSGGTANPYCAVRLTQAALQ
Ga0209733_11755321	3300027591	Forest Soil	SSGIVIDNQVSNGGTNIYFSTLATGSVNGQKCNVTGGVANPYCAVKLTQSTLQ
Ga0209733_11806351	3300027591	Forest Soil	IVDNQLSNGGTNIYFSTLAKGSVNGQKCNVAGGTANPYCAVKLTQSNLQ
Ga0208324_12139652	3300027604	Peatlands Soil	VIDNEVSNGGTNIYFSTMAPGSVNAQKCNVSGGTANPYCAVNLTQAALQ
Ga0209736_10925301	3300027660	Forest Soil	PSKLGGTSGIIVDNQLSNGGTNIYFSTLAKGSVNGQKCNVAGGTANPYCAVKLTQSNLQ
Ga0209736_12027841	3300027660	Forest Soil	CVTSPSVLEGTSGIVIDNQVSNGGTNIYFSTLAAGSVNSQKCNVSGGTANPYCAVRLTQSALQ
Ga0209655_100499953	3300027767	Bog Forest Soil	PPAIGGVSGIIIDNEVTDGGTNIYFTTLGPGSVNGGNCSVAGGTANPYCAVKLTQSALQ
Ga0209039_101840612	3300027825	Bog Forest Soil	SSLSTPDCLILPTSSCVTAPGALGGTSGVIIDNQVSNGGTNIYFSTLAPGSVNHQNCSVSGGAANPYCAVQLSQSGLN
Ga0209773_101961801	3300027829	Bog Forest Soil	VIDNELSNGGTNIYFSTMAAGSVNGQKCNVSGGVANPNCAVKLTQSGLQ
Ga0209274_102209381	3300027853	Soil	PSALGGTSGIIIDNEVSNGGTNIYFSTLAPGSVNNANCSTTDGAANPYCAVKLTQSGLN
Ga0209274_106314863	3300027853	Soil	VTVPPAIEGVSGITIDNEVSNGGTNIYFTTLGPGSVSGGNCSVAGGLANPYCAVKL
Ga0209517_100597044	3300027854	Peatlands Soil	LGGTSGIVIDNQVSNGGTNIYFSTMAPGSVNSQKCNVSGGTANPYCAVRLTQAALQ
Ga0209517_105903211	3300027854	Peatlands Soil	SPSALGGTSGIVIDNELSNGGTNIYFSTMAAGSVNGQKCNVSGGTPNPYCAVKLTQSALQ
Ga0209169_103101562	3300027879	Soil	ALGGTSGIIIDNQLSNGGTNIYFSTMALGSVNGQNCKAAGGTANPYCAVKLTQAALQ
Ga0209275_100081821	3300027884	Soil	TSLTTPNCTGLPTSSCVSSPSALGGTSGIVIDNQVSNGGGANIYFSTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0209415_104663213	3300027905	Peatlands Soil	FLESSTITTSLATPNCTGTPTSTCVNAPSALGGTSGIVIDNQVSNGGTNVYFSTMAPGSVNSQKCNVSGGTANPYCAVRLTQAALQ
Ga0209583_102570311	3300027910	Watersheds	PTALGGTSGIVVDNQLSNGGTNIYFGTLAPGSVNGQKCNVTGGLANPYCAVKLTQAGLQ
Ga0209698_105441581	3300027911	Watersheds	APAALGGTSGIVIDNQLSNGGTNIYFTTLAVGSVNGQKCNVSGGAANPYCVVKLTQSALQ
Ga0307312_102847142	3300028828	Soil	SPPTSTCVTTPPALGGTSGIVIDNQVTNGGTNIYFSTIARGGVNGQNCHVTGGAATPFCAVKLTQSALQ
Ga0302289_10948651	3300028857	Fen	SNPPTSSCVTAPIALGGTSAIVIDNAVSGGGTNLYFTTLAPGSVNGQKCNVAGGTANPYCAVQLTQAGLQ
Ga0302163_100958762	3300028868	Fen	NCSNPPTSSCVTAPIALGGTSAIVIDNAVSGGGTNLYFTTLAPGSVNGQKCNVAGGTANPYCAVQLTQAGLQ
Ga0311358_109329721	3300029915	Bog	IDNALSNGGTNLYFSTLAVGDVSGQKCPSGVTGGSANPYCAVKLTQSALQ
Ga0311332_102479163	3300029984	Fen	DGFIESSVLTSSASTANCSNPPTSSCVTAPIALGGTSAIVIDNAVSGGGTNLYFTTLAPGSVNGQKCNVAGGTANPYCAVQLTQAGLQ
Ga0302304_101761142	3300029993	Palsa	APTSTCVTTPKALGGTSGIVIDNQVSNGGDNIYFSTLAVGDVSGQKCPSGVAGGSANPYCAVKLTQSALQ
Ga0302210_102006042	3300029995	Fen	PIALGGTSAIVIDNAVSGGGTNLYFTTLAPGSVNGQKCNVAGGTANPYCAVQLTQAGLQ
Ga0302178_103453961	3300030013	Palsa	GTSGIVIDNELSNGGTNIYFSTMTAGSVNGQKCNVSGGSANPHCAVKLTQAGLQ
Ga0302274_102605681	3300030041	Bog	GTSGIVIDNALSNGGTNLYFSTLAVGDVSGQKCPSGVTGGSANPYCAVKLTQSALQ
Ga0302306_103627782	3300030043	Palsa	SSTITTSLAAPVCTGAPTSTCVTTPKALGGTSGIVIDNQVSNGGDNIYFSTLAVGDVSGQKCPSGVAGGSANPYCAVKLTQSALQ
Ga0311345_103843774	3300030688	Bog	TCTTTPAALGGTSGIVIDNQVSNGGANIYFSTLASGSVNSQKCSISGGSANPHCAVKLTQSAFK
Ga0311345_108964352	3300030688	Bog	VTTPSALGGTSGIVIDNALSNGGTNLYFSTLAVGDVSGQKCPSGVTGGSANPYCAVKLTQSALQ
Ga0311335_103775612	3300030838	Fen	APTASCVTAPAALGGTSGIVVDNQVSNGGANIYFSTLAPGSVNGQKCNVPGGLANPYCAVKVTQLALQ
Ga0310686_1173726441	3300031708	Soil	PSGIIVDNQLSNGGTNIYFSTMAAGSVNSQKCNVTGGTANPYCAVKLTQAGLQ
Ga0307476_103964581	3300031715	Hardwood Forest Soil	SDGFLESSSIATLLTTPTCTGAPTSSCVTSPNAIGGTSGIVIDNEVSNGGTNIYFSTRGQGSVNSQKCNVSGGAANPYCAVKLTQSALQ
Ga0307476_111972911	3300031715	Hardwood Forest Soil	SCTNPPTSSCVTTPHALGGTSGIIVDNQLSNGGTNIYFTTLAVGGVNGQNCKTGAKGASNNPYCAVKLTQSGLQ
Ga0307475_112608631	3300031754	Hardwood Forest Soil	GSPTASCVTAPHKLGGTSGIIVDNQLTAGGGANIYFGTLAPGSVNGQKCNVAGGSANPYCAVKLTQSALQ
Ga0307478_106453981	3300031823	Hardwood Forest Soil	SCVSAPSALGGTSGIVIDNLVSNGGTNIYFSTLAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0310909_105817112	3300031947	Soil	TCVTAPTALGGTSGIVIDNQLSNGGTNIYFSTLSTGSVNGQKCNVSGGTAKPYCAVKLTQSALQ
Ga0307479_112474032	3300031962	Hardwood Forest Soil	KITSSLTTPNCVGTPTSSCVTSPSALGGTSGIVIDNQVSNGGTNIYFSTMAPGSVNGQKCNVPSGTANPYCAVRLTQSALQ
Ga0311301_113560091	3300032160	Peatlands Soil	TCTGAPTSSCVTAPKALGGTSGIVIDNQLSNGGTNIYFTTVAAGSVNGQKCNVSGGTANPYCAVKLTQSALQ
Ga0306920_1001641381	3300032261	Soil	NCTSPPTSTCVTAPTALGGTSGIVIDNQLSNGGTNIYFSTLSAGSVNGQNCKVSGGTATPYCAVKLTQSALQ
Ga0335085_111069112	3300032770	Soil	GGASPTSTCVKVAAALQGTSGITIDNLVANGGRNIYFVPLGKGSVNGGNCRVSGGATTPYCAVKLTQAGLQ
Ga0335070_109357661	3300032829	Soil	TPTEGYVQSSTIKSSLSTPSCGASPTASCVKAPASLGGTSGIVIDNQVSNGGTNIYFTTLGVGSVNSQKCNVTGGSANPYCAVKLTQSGLQ
Ga0335081_124534221	3300032892	Soil	AALGGTSGIIIDNLLSNGGTNIYFTTLAVGSVNGQKCNVSGGSANPYCAVKLTQSALN
Ga0335076_101817771	3300032955	Soil	GIVIDNQLSNGGTNIYFSTLAPGSVNGQNCHVSGGATTPYCIVKLTQSALQ
Ga0316214_10016951	3300033545	Roots	TPNCTTTATSTCVTAPDALGGTSGIIVDNQLSNGGTNIYFSTMAAGSVNGQNCHATGGTATPYCAVKLTQAGLQ
Ga0334837_072636_562_783	3300033823	Soil	TAGAPTSSCVTAPSALGGTSGIVIDNEVPDGGTNIYFSTLAVGSVNGGKCPSGLTGGSLNPYCAVKLTQSGLE
Ga0334810_187143_176_364	3300033890	Soil	MKAPKALGGTSGIVVDNQVSNGGTNIYFSTLAPGSVNNQKCNVSGGAANPYCAVKVTQSGLN
Ga0370484_0118336_2_151	3300034125	Untreated Peat Soil	VIDNELSNGGTNIYFSTLAVGSVNGQKCNVSGGAANPYCAVKLTQSALQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060313

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences