NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F060273

Metagenome Family F060273

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F060273
Family Type Metagenome
Number of Sequences 133
Average Sequence Length 60 residues
Representative Sequence MKRCPQCNRVETDDALAFCRGDGTALISDSGPVGAEAGTVKFGSAPVSSEIETSILP
Number of Associated Samples 108
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 25.78 %
% of genes near scaffold ends (potentially truncated) 91.73 %
% of genes from short scaffolds (< 2000 bps) 90.98 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.233 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(28.571 % of family members)
Environment Ontology (ENVO) Unclassified
(36.842 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.887 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 4.71%    Coil/Unstructured: 95.29%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF13414TPR_11 13.53
PF13432TPR_16 7.52
PF14559TPR_19 4.51
PF07676PD40 4.51
PF13181TPR_8 3.01
PF10543ORF6N 1.50
PF00069Pkinase 1.50
PF12893Lumazine_bd_2 1.50
PF12973Cupin_7 0.75
PF01476LysM 0.75
PF01548DEDD_Tnp_IS110 0.75
PF13374TPR_10 0.75
PF13751DDE_Tnp_1_6 0.75
PF08681DUF1778 0.75
PF01850PIN 0.75
PF13744HTH_37 0.75
PF05762VWA_CoxE 0.75
PF04972BON 0.75
PF13429TPR_15 0.75
PF14076DUF4258 0.75
PF00850Hist_deacetyl 0.75
PF13474SnoaL_3 0.75
PF00034Cytochrom_C 0.75
PF01979Amidohydro_1 0.75
PF04255DUF433 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 6.02
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.50
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.75
COG3547TransposaseMobilome: prophages, transposons [X] 0.75
COG4453Uncharacterized conserved protein, DUF1778 familyFunction unknown [S] 0.75

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.23 %
UnclassifiedrootN/A6.77 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459009|GA8DASG02HTB3AAll Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium504Open in IMG/M
3300001380|JGI1356J14229_10051073Not Available2080Open in IMG/M
3300005167|Ga0066672_10361403All Organisms → cellular organisms → Bacteria → Acidobacteria948Open in IMG/M
3300005174|Ga0066680_10747317Not Available595Open in IMG/M
3300005178|Ga0066688_10152208All Organisms → cellular organisms → Bacteria → Acidobacteria1450Open in IMG/M
3300005181|Ga0066678_10254268All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300005186|Ga0066676_10590114All Organisms → cellular organisms → Bacteria → Acidobacteria753Open in IMG/M
3300005294|Ga0065705_10577270All Organisms → cellular organisms → Bacteria → Acidobacteria721Open in IMG/M
3300005294|Ga0065705_10796567All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300005332|Ga0066388_100446788All Organisms → cellular organisms → Bacteria1935Open in IMG/M
3300005340|Ga0070689_101861672All Organisms → cellular organisms → Bacteria → Acidobacteria549Open in IMG/M
3300005353|Ga0070669_100597649All Organisms → cellular organisms → Bacteria → Acidobacteria924Open in IMG/M
3300005445|Ga0070708_100355087All Organisms → cellular organisms → Bacteria → Acidobacteria1381Open in IMG/M
3300005445|Ga0070708_100384860All Organisms → cellular organisms → Bacteria → Acidobacteria1323Open in IMG/M
3300005445|Ga0070708_100520518All Organisms → cellular organisms → Bacteria1122Open in IMG/M
3300005446|Ga0066686_11061511All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300005447|Ga0066689_10622251All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii680Open in IMG/M
3300005450|Ga0066682_10641461All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300005454|Ga0066687_10425911All Organisms → cellular organisms → Bacteria → Acidobacteria772Open in IMG/M
3300005467|Ga0070706_101130917All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300005467|Ga0070706_101140966All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300005467|Ga0070706_102121651Not Available508Open in IMG/M
3300005471|Ga0070698_100826080All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium871Open in IMG/M
3300005471|Ga0070698_101951963All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium540Open in IMG/M
3300005518|Ga0070699_100679420All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300005526|Ga0073909_10048729All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1529Open in IMG/M
3300005536|Ga0070697_100776474All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300005543|Ga0070672_100426080All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1140Open in IMG/M
3300005549|Ga0070704_102151053All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300005554|Ga0066661_10104969All Organisms → cellular organisms → Bacteria1694Open in IMG/M
3300005554|Ga0066661_10302340All Organisms → cellular organisms → Bacteria → Acidobacteria985Open in IMG/M
3300005554|Ga0066661_10855210All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300005559|Ga0066700_10364346All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1020Open in IMG/M
3300005561|Ga0066699_10203939All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium1378Open in IMG/M
3300005568|Ga0066703_10229628All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1128Open in IMG/M
3300005575|Ga0066702_10242425All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300005713|Ga0066905_100184177All Organisms → cellular organisms → Bacteria1544Open in IMG/M
3300005841|Ga0068863_101454128All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300006034|Ga0066656_10373415All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia922Open in IMG/M
3300006173|Ga0070716_100754209All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia749Open in IMG/M
3300006173|Ga0070716_101582417All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales538Open in IMG/M
3300006797|Ga0066659_10887211All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia744Open in IMG/M
3300006800|Ga0066660_11171560All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia605Open in IMG/M
3300006800|Ga0066660_11638986All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300006852|Ga0075433_11002322All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium727Open in IMG/M
3300006854|Ga0075425_100616307All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1248Open in IMG/M
3300006894|Ga0079215_10000604All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia8586Open in IMG/M
3300007004|Ga0079218_10736284All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia933Open in IMG/M
3300009038|Ga0099829_11321127All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300009089|Ga0099828_10347913All Organisms → cellular organisms → Bacteria → Acidobacteria1335Open in IMG/M
3300009089|Ga0099828_10544644All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1046Open in IMG/M
3300009100|Ga0075418_13067859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300009137|Ga0066709_101617955All Organisms → cellular organisms → Bacteria926Open in IMG/M
3300009137|Ga0066709_102768215All Organisms → cellular organisms → Bacteria → Acidobacteria652Open in IMG/M
3300009147|Ga0114129_10486054All Organisms → cellular organisms → Bacteria → Acidobacteria1615Open in IMG/M
3300010043|Ga0126380_10783212All Organisms → cellular organisms → Bacteria → Acidobacteria778Open in IMG/M
3300010360|Ga0126372_12848483All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300010397|Ga0134124_10468729All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300011003|Ga0138514_100056362All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300012189|Ga0137388_11467523All Organisms → cellular organisms → Bacteria → Acidobacteria620Open in IMG/M
3300012202|Ga0137363_10436982All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300012203|Ga0137399_10832383All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300012203|Ga0137399_11436195All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300012206|Ga0137380_10665192Not Available906Open in IMG/M
3300012206|Ga0137380_11680142All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300012208|Ga0137376_10065993All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2998Open in IMG/M
3300012210|Ga0137378_10777407All Organisms → cellular organisms → Bacteria → Acidobacteria869Open in IMG/M
3300012349|Ga0137387_10482060All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium900Open in IMG/M
3300012350|Ga0137372_10904388All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300012353|Ga0137367_11051764All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300012353|Ga0137367_11160270All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300012354|Ga0137366_10133015All Organisms → cellular organisms → Bacteria → Acidobacteria1876Open in IMG/M
3300012354|Ga0137366_10166331All Organisms → cellular organisms → Bacteria1657Open in IMG/M
3300012356|Ga0137371_11435000All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300012357|Ga0137384_10078501All Organisms → cellular organisms → Bacteria2743Open in IMG/M
3300012357|Ga0137384_11050693All Organisms → cellular organisms → Bacteria → Acidobacteria654Open in IMG/M
3300012361|Ga0137360_10444054All Organisms → cellular organisms → Bacteria → Acidobacteria1098Open in IMG/M
3300012362|Ga0137361_11131609All Organisms → cellular organisms → Bacteria → Acidobacteria704Open in IMG/M
3300012362|Ga0137361_11938264All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300012532|Ga0137373_10248181All Organisms → cellular organisms → Bacteria1439Open in IMG/M
3300012582|Ga0137358_10711253All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300012685|Ga0137397_10350113All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300012922|Ga0137394_10816146All Organisms → cellular organisms → Bacteria → Acidobacteria781Open in IMG/M
3300012922|Ga0137394_11594982All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300012923|Ga0137359_10195227All Organisms → cellular organisms → Bacteria → Acidobacteria1808Open in IMG/M
3300012923|Ga0137359_11115398All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium675Open in IMG/M
3300012925|Ga0137419_11718987All Organisms → cellular organisms → Bacteria → Acidobacteria536Open in IMG/M
3300012930|Ga0137407_12248381All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300012944|Ga0137410_11244692All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300012944|Ga0137410_11389875All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300012955|Ga0164298_10354265All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium931Open in IMG/M
3300012955|Ga0164298_10848262All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300012961|Ga0164302_11302958All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300013297|Ga0157378_13066127All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300015373|Ga0132257_103009401All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium614Open in IMG/M
3300017656|Ga0134112_10095531All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1113Open in IMG/M
3300017695|Ga0180121_10008313All Organisms → cellular organisms → Bacteria3860Open in IMG/M
3300018429|Ga0190272_11290850All Organisms → cellular organisms → Bacteria → Acidobacteria725Open in IMG/M
3300018468|Ga0066662_11470986All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300018482|Ga0066669_10471841All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1081Open in IMG/M
3300018482|Ga0066669_12209754All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300019888|Ga0193751_1034391All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2335Open in IMG/M
3300024330|Ga0137417_1147113All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300025313|Ga0209431_10131453All Organisms → cellular organisms → Bacteria1979Open in IMG/M
3300025325|Ga0209341_10695695All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium784Open in IMG/M
3300025901|Ga0207688_10976385All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300025917|Ga0207660_11555619All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300025918|Ga0207662_11137890All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300025933|Ga0207706_11433339All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300025939|Ga0207665_10420710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1021Open in IMG/M
3300026309|Ga0209055_1074346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1413Open in IMG/M
3300026309|Ga0209055_1205430All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium602Open in IMG/M
3300026318|Ga0209471_1288954All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300026524|Ga0209690_1134043All Organisms → cellular organisms → Bacteria → Acidobacteria948Open in IMG/M
3300026547|Ga0209156_10111734All Organisms → cellular organisms → Bacteria → Acidobacteria1348Open in IMG/M
3300027821|Ga0209811_10443561All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300027875|Ga0209283_10412158All Organisms → cellular organisms → Bacteria → Acidobacteria879Open in IMG/M
3300027907|Ga0207428_10535725All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium848Open in IMG/M
3300028380|Ga0268265_12018039All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300031716|Ga0310813_11354766All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium659Open in IMG/M
3300031720|Ga0307469_10666255All Organisms → cellular organisms → Bacteria → Acidobacteria939Open in IMG/M
3300032000|Ga0310903_10261435All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300032013|Ga0310906_11474285All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300032174|Ga0307470_11857469All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300032179|Ga0310889_10017294All Organisms → cellular organisms → Bacteria → Acidobacteria2461Open in IMG/M
3300032180|Ga0307471_101250999All Organisms → cellular organisms → Bacteria → Acidobacteria905Open in IMG/M
3300032205|Ga0307472_101560079All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300032516|Ga0315273_12821162All Organisms → cellular organisms → Bacteria550Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil18.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.28%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.51%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.76%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.76%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.01%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.26%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.50%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.50%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.50%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.50%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.50%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.50%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.75%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.75%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.75%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.75%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.75%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.75%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459006Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cmEnvironmentalOpen in IMG/M
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
3300001380Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 mEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
L01_047327802170459006Grass SoilMKRCPQCNRVETDDALVFRRADGTALVNDPSLGSERGTARFGSAPAAAESD
F47_126768502170459009Grass SoilMKRCPQCNRVERDEGLKFCRVDGATLITDSGSVSGEVGTTKFGFASVSSEIETGVLPHRTDADITRP
JGI1356J14229_1005107313300001380GroundwaterMKRCPTCNRIETDDALVFCRADGTALISDSGPVGAEAGTVKFSSGAVSSEIETSV
Ga0066672_1036140313300005167SoilMKRCPECKRVENDDDALVFCRVDGTALVSDSSSDAGTVRFGSTPGATETETSIL
Ga0066680_1074731723300005174SoilMKRCPECKRVENDDALVFCRVDGTALVSDSSSDAGTVRFGSTPGATETETSILPQTVIDADISRRAAP
Ga0066688_1015220823300005178SoilMKRCPECKRVENDDDALVFCRVDGTALVSDSSSDAGTVRFGSTPGATETETSILPQTVNDADISRA*
Ga0066678_1025426813300005181SoilMKRCPACKRVELDDTLAFCRVDGTPLVSDSGLAIADADTVKFGSAPVASEVKTSVLPQTLTDSDINRPTAPT
Ga0066676_1059011413300005186SoilMKRCPQCNRVETDDTLAFCRADGTALINDSGPVNADAGTAKFGSGAVSSEIDTSILP
Ga0065705_1057727013300005294Switchgrass RhizosphereMKRCPQCNRVESDDALVFCRADGTALISESGSVTGDAGTVKFGAGGVSAELET
Ga0065705_1079656713300005294Switchgrass RhizosphereMKHCPACKRVEPDDTLIYCRADGTPLVNDSGSISADAGTIRFGSMTVASEVETSVLSQTTTDADMNRSTTVLPPQSISAN
Ga0065707_1117543823300005295Switchgrass RhizosphereMKRCPQCNRVESDETLKFCRIDGIALVSDSSSIDQEAGTAKLGSGSVSREIETSILPHTTDAS
Ga0066388_10044678813300005332Tropical Forest SoilMKRCSTCNRLETDEALKFCRVDGTTLVSDSGGVSADGGTVKF
Ga0070689_10186167223300005340Switchgrass RhizosphereMKRCPHCNRVETDQALKFCRVDGTTLVVDSGSVSDEAGTIRLGSGSVSSE
Ga0070669_10059764913300005353Switchgrass RhizosphereMKRCPQCHRVEADEALKFCRVDGATLISDYGSIVDEVGTAKFGSGAVSSEIE
Ga0070694_10167798623300005444Corn, Switchgrass And Miscanthus RhizosphereMKHCPACKRVEPDDTLIYCRADGTPLVNDSGSISADAGTIRFGSMTVASEVETSVLSQTTTDADMNRSTTVLPPQSISANTQELSK
Ga0070708_10035508713300005445Corn, Switchgrass And Miscanthus RhizosphereVKTCPACKRVETDDALTFCRADGTALISDSDSVSAEIGTAKFSSAPVACEIETSILPQKVTDADMS
Ga0070708_10038486023300005445Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCHRVETDDTLVFCRSDGTALISASGSLSSDLNTAKFGSGPVSSEIETSLLPHTSTTPE
Ga0070708_10052051833300005445Corn, Switchgrass And Miscanthus RhizosphereMKRCPTCNRVESDDALVFCRADGTALIGDSGPVSADAGTVKFGSAPAASEIETSVLPRA
Ga0066686_1106151123300005446SoilMKRCPACNRVENDDTLTFCRADGTALVSDSSSLDNEAGTARLGSTPVATEIETSILPH
Ga0066689_1062225123300005447SoilMKRCPQCNRVETDDALVFCRADGTALISDSGPVSAEAGTVKFGSAPVSSEIET
Ga0066682_1064146133300005450SoilMKRCPACKRVELDDTLAFCRVDGTPLVSDSGLAIADADTVKFGS
Ga0066687_1042591113300005454SoilMKRCPACKRVESDDALVFCRADGTPLISDSGSVAAEAGTAKLGSSPASEVETSVLPQHATDAGV
Ga0070706_10113091723300005467Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCKRVENDDTLVFCRADGTALVNDSGATSRDAGTVRFGSGEAS
Ga0070706_10114096613300005467Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCNRVESDDALAFCRADGTTLISDSGPVSAEVGTVKFSSGAVSSEIETSILPR
Ga0070706_10212165123300005467Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCNRVETDDALAFCRADGTALVSDSGSVCAETGTVKFGSAPAASEVETSVLPQHATDAG
Ga0070698_10082608023300005471Corn, Switchgrass And Miscanthus RhizosphereMKRCPACKRVEHDDSLAFCRADGTPLVNDSDSFSRDARTAKFGSALASSEIETSILPHTTDASINR
Ga0070698_10195196313300005471Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCNRVETDDALAFCRGDGTALISDSGPVGAEAGTVKFGSAPVSSEIETSILP
Ga0070699_10067942033300005518Corn, Switchgrass And Miscanthus RhizosphereMKRCPACKRVENDDTLTFCRADGTILICESGSVGAEAGTVRLGSAPVAGEVETSVLPQHGTDAEIIRATGPTTV
Ga0073909_1004872923300005526Surface SoilMKRCPACKRVEPDDTLTFCRADGTILISESGSVSPEAGTVRFGSSPEAN
Ga0070697_10077647423300005536Corn, Switchgrass And Miscanthus RhizosphereMKRCPACKRFEPDDVLTFCRADGTPLVNDPGSAKVDADTVRGDLN
Ga0070672_10042608013300005543Miscanthus RhizosphereMKRCPQCHRVETDDALTFCRADGTPLVSDPSSVGSETGTAKFGSAPEATE
Ga0070704_10215105323300005549Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCNRVETDEALKFCRVDGATLINDSGAVADVTTAKSGPDAASSEIETSILPHRTDADMNRPAAPTTVLP
Ga0066661_1010496913300005554SoilMKRCPACKRVEPDDALTFCRADGTALVTDSGAVSAEAGTAKFGSAPVA
Ga0066661_1030234023300005554SoilMKRCPECKRVENDDTLTYCRADGTPLVSDSDSVSAEAGTAKFRSAPVASEIETSVLPQHGSE*
Ga0066661_1085521023300005554SoilMKRCPECKRVENDDALVFCRVDGTALVSDSSSDAGTVRFGSTPGATETETSILPQTVNDADISRA*
Ga0066700_1036434623300005559SoilMKRCPQCNRVETDDALAFCRADGTALISDSGSFSGDAGTAKFGSAPVSN
Ga0066699_1020393913300005561SoilMKRCPQCDRVETDDALAFCRADGTALVSDASSIDQEAGTVKLGSGSVANESATGILPQTTDANIN
Ga0066703_1022962823300005568SoilMKRCPACKRVEPDDTLTFCRTDGTALVTDSGAVSEDAGTVKFGTAPVASEVKTSVLPQHATD
Ga0066702_1024242513300005575SoilMKRCPACKRVEPDDALTFCRADGTPLVSDSASERAETGTVKFGSAPV
Ga0066905_10018417713300005713Tropical Forest SoilMKRCPQCNRAETDDALAFCRVDGTALVSDPSAIGSEAGTVESQPSSSEIETSIL
Ga0068863_10145412813300005841Switchgrass RhizosphereMKRCPQCHRVETDDALAFCRADGTPLVSDPSSVGSETGTAKFGSAPEATETETSIL
Ga0066656_1037341513300006034SoilMKRCPACKRVENDDTLAFCRTDGAPLVSDSGSVSADAGTAKFGSSPVASEVATNILPQHATDAGVGRATGP
Ga0070716_10075420923300006173Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCNRLEPDDALGYCRADGTALISDSGPVSTEAGTVKFGSAAVSSGIQIGVLPQTITKNAVSAVIPGQSE*
Ga0070716_10158241723300006173Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCNRVETDDALVFCRADGTALISDSGPVSAEAETVKFGSAPVSSEIETSVLPH
Ga0066659_1088721123300006797SoilMKRCPACKRVESDDTLTFCRADGTPLVIDSNSLGAEIGTVKFASA
Ga0066660_1117156013300006800SoilMKRCPACKRIENDDTLTFCRADGTALVIDSNLLGAEIGTVKFASAPVASELETSVLPH
Ga0066660_1163898613300006800SoilMKRCPQCNRVENDDALTFCRADGTPLVSDSSAVSAEAGTARFSSAPVASETETNILPQT
Ga0075433_1100232223300006852Populus RhizosphereMKRCPQCNRVETDEALKFCRVDGVTLISDSGAVADDASTAKFGADAASEIETSVLPHTT
Ga0075425_10061630723300006854Populus RhizosphereMKRCPQCNRVEPDDALAFCRVDGATLISESGSESAGASTGKVSVSAQSEIETS
Ga0079215_1000060493300006894Agricultural SoilMKRCPQCNRVEADEALAFCRSDGTPLVRESLPLNTEAGTAKFGSSPNEIDTSLLP
Ga0079218_1073628423300007004Agricultural SoilMKRCPACKRVENDDSLAFCRADGTPLVNDSDSFSRDARTAKFGSAPASSEIETSILPHTTGASINRPTAPTT
Ga0099829_1132112723300009038Vadose Zone SoilMKRCPQCNRIESDDALTFCRADGTPLVIDSNSLGAEIGTVKFASAPVASEVETSVLPQHATDHRMGRPTGPI*
Ga0099828_1034791313300009089Vadose Zone SoilLRYTDETLPACKRIEPDDTLVFCRADGTPLVSDSGSASINAGTVKLGSSPLASEVETSVLPQHATD
Ga0099828_1054464423300009089Vadose Zone SoilMKRCPACKRVENDDTLAFCRSDGTALVSDSGPVSAEAGTAKFGSASVSSEID
Ga0075418_1306785923300009100Populus RhizosphereMKRCPQCNRVETDDALVFCRADGTSLISDSFQTSSELGTAAAGSDSSSEMETSILPNKTDAGMNRATAP
Ga0066709_10161795523300009137Grasslands SoilMKRCPACKRVEPDDALTFCRADGTILISESGSVGANAGTMKFALSPVANEAETSVLPHHPTDASVSRASGS
Ga0066709_10276821513300009137Grasslands SoilMKGCPACKRVENDDALVFCRADGTALVIVSGPLNAEAGTAKFGSASVSSE
Ga0114129_1048605413300009147Populus RhizosphereMKRCPQCNRVEPDDALAYCRADGMTLVSDSGAVCGDAGTAKFDSAPVPSEI
Ga0126380_1078321223300010043Tropical Forest SoilVKRCPECNRIETNDALTFCRTDGTPLVRESGSVNVDAGTARFVSGAVSSEIETNVLPHR
Ga0126372_1284848323300010360Tropical Forest SoilMKRCPSCNRVETDDTLGFCRADGTALVSDSLPIGSDSRPVFESANASSEIETS
Ga0134124_1046872913300010397Terrestrial SoilMKRCPQCNRVESDEALKFCRADGATLISESGSVSDDAGTAKFVSAAVSSEIETSVLPHRTDADIN
Ga0138514_10005636223300011003SoilMKRCPACKRVEPDTLAFCRADGTALISDSGSISADSGTVKFTSVPVSSE
Ga0137388_1146752313300012189Vadose Zone SoilMKRCPACKRVETDDALAFCRADGTPLINDSGAVTPDAGTVKFGFAPVASEVETS
Ga0137363_1043698223300012202Vadose Zone SoilMKLCPACKRVEPDDALVFCRADGTALVSDAGSVSPVASEIETSVLP
Ga0137399_1083238313300012203Vadose Zone SoilMKRCTACNRVENDDALVFCRADGTALVIDSGSVSADAGTARFGSASVASEVETSVLPQH
Ga0137399_1143619513300012203Vadose Zone SoilMKRCPQCDRVENDDALTFCRADGTPLISDSSSVGAEAGTAKFGSSPAASEIETSV
Ga0137380_1066519213300012206Vadose Zone SoilMKRCPQCNRLETDDALALCRADGTPLISDSGLVNADAGTVKLTSAPVSSEIETSVLPHTSTSPEREQDYLI
Ga0137380_1168014213300012206Vadose Zone SoilMKRCPACKRVESDDALTFCRVDGTALVSDLGSASTDAGTVKLGSAPVASEVETSV
Ga0137376_1006599323300012208Vadose Zone SoilMKRCPQCNRVESDDALAFCRADGTALVSDSSSLGNEAGTAKLGSASTANEIETS
Ga0137378_1077740723300012210Vadose Zone SoilMKRCPACKRVEPDDALTFCRADGTILISESGAVGANAGTMKFALSPVAKEAETSV
Ga0137387_1021678233300012349Vadose Zone SoilMKRCPACKRVEPDDALVFCRADGTILISESGSVAGDAGTMKFG
Ga0137387_1048206023300012349Vadose Zone SoilMKRCPACKRVENDDTLTFCRADGTALISDSGSVSAEAGTVKFGSAPVSSEIQTSVLPHTSTT
Ga0137372_1090438823300012350Vadose Zone SoilMWQGRAAEILAIKRMKRCPQCNRIETDEALKFCRVDGATLVSESAQLPSETGTMQLGYGTVSTEIETSIL
Ga0137367_1105176413300012353Vadose Zone SoilMKHCPQCNRVETDDALAFCRADGTALINDSGSVGTEAGTAKFGSAPVSSEIETSVLPHTSTT
Ga0137367_1116027013300012353Vadose Zone SoilMKRCPQCKRVENDDTLVFCRVDGTALTSDSASVGADAGTVKFG
Ga0137366_1013301523300012354Vadose Zone SoilMKRCPTCHRVETDDTLVFCRTDGTALIGDPGSVSTEAGTVKFGSAPVASEIESSVLPKAATDAPISESTAQTTML
Ga0137366_1016633133300012354Vadose Zone SoilMKRCPRCNRVETDDALAFCRVDGATLVRDSGSVGEEAGTTKFGSHPSAPVSSEVKTSILPHTTDSSVSRATAP
Ga0137371_1143500023300012356Vadose Zone SoilMKRCPACKRVENDDTLVFCRADGTALVSDSGPVSAEAGTAKFGSAPVSSEIATSVLP
Ga0137384_1007850133300012357Vadose Zone SoilMKRCPQCNRLETDDALALCRADGTPLISDSGLVNADAGTVKLTSAPVSSEIETSVLPHTSTSPEREQDYLITSDAANEIRQRSSLV*
Ga0137384_1105069333300012357Vadose Zone SoilMKRCPQCNRVETDDTLGYCRADGMALVGDSGSVNAEAGTMKLGSAAVSSEIQTNVLP
Ga0137360_1044405413300012361Vadose Zone SoilMKRCPKCKRVENDDALVFCRVDGTALVSDSSSDAGTVRFGSTPGATETETSILPQTVNDADISR
Ga0137361_1113160913300012362Vadose Zone SoilMKRCPQCNRVETDDALGFCRADGTALVSDSSRLSSEVGTAQLGSASAVTEIETS
Ga0137361_1193826413300012362Vadose Zone SoilMKRCPACKRVEPDDTLVFCRADGTPLVSDSGSASAEIDTAKFGSSPVASEVETSVLPQHATDDGMGRPIG
Ga0137373_1024818113300012532Vadose Zone SoilMKHCPQCNRVESDDALVFCRADGTALISDSGLVSAEAGTAKCGSSPMASEVETSV
Ga0137358_1071125323300012582Vadose Zone SoilMKRCPQCQRVEPDDTLAFCRADGTALISDSGSVSADAGTVKFGSAPVASEVAT
Ga0137397_1035011313300012685Vadose Zone SoilMKRCPQCNRVENDDTLVFCRADGTALVGDSGPINADAGTVRFGSAPVASEVETSVLPQHVTDAGIS
Ga0137396_1129416623300012918Vadose Zone SoilVNLKRCPQCNRVETDDALVFCRADGTALVGDSGAVSADAGTVKFRSSPGA
Ga0137394_1081614623300012922Vadose Zone SoilMKRCPQCNRAETDDTLVFCRADGTALISDSGTVGADAGTVKFGSSPIANEIETSVLPHPSTS
Ga0137394_1159498213300012922Vadose Zone SoilMKRCPQCNRVETDDALAFCRADGTALVGDSSSLGSEAGTAKFSHASEVSEIETSNLPHTTGAAMHRATAPTTV
Ga0137359_1019522723300012923Vadose Zone SoilMKRCPQCNRVETDDALVFCRADGTALVSDSGSVSAEAGTAKFGSAPVASEVLT
Ga0137359_1111539823300012923Vadose Zone SoilMKRCPQCNRVETDDALGFCRADGTALISDSGSFGGDAGTAKFGSGAVSSEIETS
Ga0137419_1171898713300012925Vadose Zone SoilMKRCPQCNRVESDDVLVFCRVDGTALMTDSDSISGDAETMKLGSRGVSSEIETSVLPHLTAAETN
Ga0137407_1224838123300012930Vadose Zone SoilMKRCPTCNRVETDDALAFCRADGVALIDHSGSLVGDTQTAKFGSGPVSSEIE
Ga0137410_1124469213300012944Vadose Zone SoilMKCCPACKRVETDDALTFCRADGTPLVSDSASVSADAGTVRFGSSPVASERETSVLPQHATDAGISRATGPTTV
Ga0137410_1138987513300012944Vadose Zone SoilMKRCPQCNRLEPDDMLVYCRADGTALITDSSSVNAEAGTVKFSSAAISSEIQTSVLPQTFTDAGISRPSAQTT
Ga0164298_1035426513300012955SoilMKRCPECKRVENDDALTFCRADGTPLVSDSGFDSAEAGTATLASASVASEIETSVLPQHATDA
Ga0164298_1084826223300012955SoilMKRCPKCNRVETDNALAFCRADGAALISDSGSISANAGTAKFESGQSLGEIETSILPHATDANMNGATVR
Ga0164302_1130295823300012961SoilMKRCPKCNRVETDNALAFCRADGAALISDSGSISANAGTAKFESGQSLGEIETSILPHATDANMNG
Ga0157378_1306612713300013297Miscanthus RhizosphereMKRCPQCHRVETDDALAFCRSDGAALIDDSGSLSGDLNTAKFGSGPVLSEIDTSLLPQ
Ga0132257_10300940123300015373Arabidopsis RhizosphereMKRCPQCNRVETDEALKFCRVDGATLVSESGSISSDAGTAKFVSGAVSSEIETSVLP
Ga0134112_1009553123300017656Grasslands SoilMKRCPQCNRVESDDALVYCRADGTALISDSGSFSGDAGTAKFGSGAVSTEIETSILPHT
Ga0180121_1000831313300017695Polar Desert SandMKRCPACNRIEPDDTLVFCRADGTALISDSGAVSAESGTVKFGSAQVVNEIETSI
Ga0190272_1129085013300018429SoilMKRCPQCSRVEPDDALAFCRADGTALISDSGSFSGDAGTAKFGSGPVSREIETSILPHTS
Ga0066662_1147098623300018468Grasslands SoilMKRCPACKRVENDDTLTFCRADGTALVTDSGSVSADAGTAKFGSASVASEVETSVLSQHATDAGVGRPTG
Ga0066669_1047184123300018482Grasslands SoilMKRCPQCNRVEIDDALVFCRVDGTILIRDSSSLNKEAGTAKLGSTASESETSVLPHTSGAAM
Ga0066669_1220975423300018482Grasslands SoilMKRCPQCNRFETDDALAYCRVDGTTLVSDSGSVSGEVGTMKFGSSQAS
Ga0193751_103439113300019888SoilMKRCPQCNRTEADDALAFCRADGTALIGDSGSLTGDAGTAKFGSAPMSSEIDTS
Ga0137417_114711313300024330Vadose Zone SoilMKRCPQCNRLEPDDTLGYCRADGTTLISDSGSVSAESGTVKFSSASVSSEIQTRVLPQTITDA
Ga0209431_1013145313300025313SoilMKRCPQCNRVETDDTLAFCRADGTALISDTGAVSAESGTVKFGSAPLSSEIETSVLPHTSTT
Ga0209341_1069569513300025325SoilMKRCPQCNRVEQDDTLAFCRADGTALISDSGPVSADAGTVKFTSAPVSSEIATGVLPQAMTDV
Ga0207688_1097638523300025901Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCNRLECDEALKFCRVDGTTLISDSGAVSGDAGTAKFGSGAVSG
Ga0207660_1155561913300025917Corn RhizosphereMKRCPQCNRVETDGALAFCRVDGTPLISESSAVADDAGTAKFGSSGISGEGETSILPNQTNAELARTTAQT
Ga0207662_1113789013300025918Switchgrass RhizosphereMKLCPQCNRVETDEALKFCRVDGATLITDSGPVSGDGGTAKFGSAPVSSEIKTSILPHTTDASIVRRRRAETVDQF
Ga0207706_1143333923300025933Corn RhizosphereMKLCPQCNRVETDEALKFCRVDGATLITDSGPVSGDGGTAKFGSAPVSSEIKTSILPHTTDASTVRRR
Ga0207665_1042071023300025939Corn, Switchgrass And Miscanthus RhizosphereMKRCPQCNRLEPDDALGYCRADGTALISDSGPVSTEAGTVKFGSAAVSSGIQIGVLPQTITKNAVSAVIPGQSE
Ga0209055_107434653300026309SoilMKRCPACKRVEPDDALTFCRADGTALVTDSGAVSAEAGTAKFGSAPVASEVKTSVLPQTLTDAD
Ga0209055_120543013300026309SoilMKRCPACNRVETDDALAFCRADGTGLISDSSSIDQEAGTVKLGSGSVANESATGILPQTT
Ga0209471_128895423300026318SoilMKRCPACKRIENDDTLTFCRADGTILISESGSVGANAGTMKFALSPVANEAETS
Ga0209690_113404313300026524SoilMKRCPQCNRVETDDALVYCRVDGTALITDSGAISRDAGTVKFGSGEASGEIETSILPHTSTV
Ga0209156_1011173433300026547SoilMKRCPACKRVELDDTLAFCRVDGTPLVSDSGLAIADADTVKFGSAPVASEVKTSVL
Ga0209811_1044356113300027821Surface SoilMKRCPQCNRVETDESLVYCRTDGTVLISDSGAFSGNASAAKFVSGGVSSEIETSILPNVTWIAADIAGRAEP
Ga0209283_1041215813300027875Vadose Zone SoilMKRCPACKRVENDDTLAFCRSDGTALVSDSGPVSAEAGTAKFGSASVSS
Ga0207428_1053572523300027907Populus RhizosphereVKRCPQCNRVETDEALVFCRADGTALIRESGPVADDAGTVKFGSGAGSSEGETSILPNQTKAEFARPTGP
Ga0268265_1201803913300028380Switchgrass RhizosphereMKRCPQCNRLESDEALKFCRVDGTTLISDSGAVSGDAGTAKFGSGAVSSDIETSVLPHRTDADINR
Ga0310813_1135476613300031716SoilMKRCPACKRVEPDDSLAFCRVDGTALITEAGGVADVGTAKFNSAPVVNEI
Ga0307469_1066625523300031720Hardwood Forest SoilMKRCPQCNRVETDDALAFCRADGTALVSDSGTISSDAGTVKFGSSQVSSEDDTSILPH
Ga0310903_1026143523300032000SoilMKRCPQCNRLESEDALAFCRVDGTALISESGAIADDVGTAKFGSPGLS
Ga0310906_1147428513300032013SoilLPQCNRVESDEALKFCRFDGATLVSDSSAIDQQAGTVKFGSSQVSSEIDTSILP
Ga0307470_1185746913300032174Hardwood Forest SoilMKRCPQCNRVESDDALAFCRADGTALISDSGSFSGDAGTAKLGSDAVLSEIETSILPHSTDANI
Ga0310889_1001729413300032179SoilMKRCPQCNRLESEDALAFCRVDGTALISESGAIADDVGTAKFGSPGLSSEVETNI
Ga0307471_10125099923300032180Hardwood Forest SoilMKRCPQCNRVETDDALGFCRVDGTALISDSASLGAIESTERLGSRSVASEIETSILPHSVTDPG
Ga0307472_10156007913300032205Hardwood Forest SoilMKRCPQCNRVETDDALGFCRVDGTALISDSASLGAIESTERLGSRSVASEIETSILPHSVTDPGKTGP
Ga0315273_1282116213300032516SedimentMKRCPACNRVETDDALAFCRADGTALISDSGSVGSEAGTVKFNSATAASEIETSVLPHTS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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