Metagenome / Metatranscriptome Family F060270

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060270
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	80 residues
Representative Sequence	MDLQPPARKTIDLEGRLVKDGVRKALKDRQNVLTDLIQAVREYRKLSDQPLTLRGSEYAHAVQELNKAIDRAEAFLQ
Number of Associated Samples	87
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	33.33 %
% of genes near scaffold ends (potentially truncated)	61.65 %
% of genes from short scaffolds (< 2000 bps)	80.45 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.150 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (15.790 % of family members)
Environment Ontology (ENVO)	Unclassified (35.338 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.662 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.19% β-sheet: 0.00% Coil/Unstructured: 43.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF03734	YkuD	6.02
PF02586	SRAP	5.26
PF01381	HTH_3	5.26
PF12802	MarR_2	2.26
PF04851	ResIII	1.50
PF03795	YCII	1.50
PF02446	Glyco_hydro_77	1.50
PF00005	ABC_tran	1.50
PF00326	Peptidase_S9	1.50
PF05853	BKACE	0.75
PF02866	Ldh_1_C	0.75
PF02653	BPD_transp_2	0.75
PF13492	GAF_3	0.75
PF04545	Sigma70_r4	0.75
PF01068	DNA_ligase_A_M	0.75
PF00884	Sulfatase	0.75
PF13407	Peripla_BP_4	0.75
PF13424	TPR_12	0.75
PF01526	DDE_Tnp_Tn3	0.75
PF13416	SBP_bac_8	0.75
PF04238	DUF420	0.75
PF13361	UvrD_C	0.75
PF00160	Pro_isomerase	0.75
PF09844	DUF2071	0.75
PF04480	DUF559	0.75
PF12680	SnoaL_2	0.75
PF03091	CutA1	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	6.02
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	6.02
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	5.26
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	1.50
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.50
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	0.75
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG1324	Divalent cation tolerance protein CutA	Inorganic ion transport and metabolism [P]	0.75
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.75
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.75
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.75
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
All Organisms	root	All Organisms	39.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
cellular organisms	root	All Organisms → cellular organisms	39.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.10 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.51 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.26 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4.51 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.26 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.75 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.75 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	4.51 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.01 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.50 %
Ardenticatenia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Apicomplexa	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa	0.75 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.75 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.51 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.01 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	1.50 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.75 %
Aconoidasida	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida	0.75 %
unclassified Ardenticatenia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → unclassified Ardenticatenia	0.75 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.75 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.51 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.01 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.50 %
Ardenticatenia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → unclassified Ardenticatenia → Ardenticatenia bacterium	0.75 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.75 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.75 %
Piroplasmida	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida	0.75 %
Methylocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.51 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.01 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.50 %
Methylocella silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	0.75 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.75 %
Babesiidae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Babesiidae	0.75 %
Ardenticatenia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → unclassified Ardenticatenia → Ardenticatenia bacterium	0.75 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.51 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.01 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.50 %
Babesia	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Babesiidae → Babesia	0.75 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.75 %
Methylocella silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	0.75 %
Ardenticatenia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → unclassified Ardenticatenia → Ardenticatenia bacterium	0.75 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.15 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.51 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.01 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.50 %
Babesia bovis	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Babesiidae → Babesia → Babesia bovis	0.75 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.75 %
Methylocella silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	0.75 %
Ardenticatenia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → unclassified Ardenticatenia → Ardenticatenia bacterium	0.75 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.75 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100549485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1692	Open in IMG/M
3300000955\|JGI1027J12803_106156660	Not Available	1324	Open in IMG/M
3300002245\|JGIcombinedJ26739_100315338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1447	Open in IMG/M
3300002245\|JGIcombinedJ26739_100820065	Not Available	811	Open in IMG/M
3300003219\|JGI26341J46601_10016629	All Organisms → cellular organisms → Bacteria	2409	Open in IMG/M
3300003219\|JGI26341J46601_10024111	All Organisms → cellular organisms → Bacteria → Proteobacteria	1989	Open in IMG/M
3300003219\|JGI26341J46601_10037135	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300003219\|JGI26341J46601_10059127	Not Available	1180	Open in IMG/M
3300003219\|JGI26341J46601_10065268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1110	Open in IMG/M
3300003368\|JGI26340J50214_10000580	All Organisms → cellular organisms → Bacteria → Proteobacteria	12629	Open in IMG/M
3300003368\|JGI26340J50214_10188715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	510	Open in IMG/M
3300004152\|Ga0062386_100951759	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300004152\|Ga0062386_101309217	Not Available	603	Open in IMG/M
3300004152\|Ga0062386_101626379	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300004635\|Ga0062388_102110951	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300005434\|Ga0070709_11326452	Not Available	581	Open in IMG/M
3300005439\|Ga0070711_101552425	Not Available	578	Open in IMG/M
3300005467\|Ga0070706_100655193	Not Available	975	Open in IMG/M
3300005518\|Ga0070699_100700979	Not Available	925	Open in IMG/M
3300005536\|Ga0070697_100195404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1718	Open in IMG/M
3300005536\|Ga0070697_101464192	Not Available	610	Open in IMG/M
3300005536\|Ga0070697_101925255	Not Available	529	Open in IMG/M
3300005610\|Ga0070763_10827220	Not Available	548	Open in IMG/M
3300005764\|Ga0066903_105604692	Not Available	661	Open in IMG/M
3300006173\|Ga0070716_100944881	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Babesiidae → Babesia → Babesia bovis	678	Open in IMG/M
3300006175\|Ga0070712_100897059	Not Available	764	Open in IMG/M
3300006893\|Ga0073928_10050065	All Organisms → cellular organisms → Bacteria	3777	Open in IMG/M
3300006893\|Ga0073928_10108590	Not Available	2311	Open in IMG/M
3300006893\|Ga0073928_10196388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	1584	Open in IMG/M
3300006893\|Ga0073928_10230293	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300006893\|Ga0073928_10609024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	770	Open in IMG/M
3300009101\|Ga0105247_10154075	Not Available	1516	Open in IMG/M
3300009700\|Ga0116217_10860698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300010047\|Ga0126382_12105152	Not Available	540	Open in IMG/M
3300010339\|Ga0074046_10029847	All Organisms → cellular organisms → Bacteria	3728	Open in IMG/M
3300010339\|Ga0074046_10037694	All Organisms → cellular organisms → Bacteria	3265	Open in IMG/M
3300010339\|Ga0074046_10189988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1295	Open in IMG/M
3300010339\|Ga0074046_10824372	Not Available	542	Open in IMG/M
3300010341\|Ga0074045_10018326	All Organisms → cellular organisms → Bacteria	5559	Open in IMG/M
3300010376\|Ga0126381_100610775	Not Available	1552	Open in IMG/M
3300010376\|Ga0126381_103264327	Not Available	640	Open in IMG/M
3300010379\|Ga0136449_103064651	Not Available	650	Open in IMG/M
3300010379\|Ga0136449_104415783	Not Available	518	Open in IMG/M
3300010400\|Ga0134122_12995685	Not Available	526	Open in IMG/M
3300010864\|Ga0126357_1256606	Not Available	715	Open in IMG/M
3300011120\|Ga0150983_11268538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	978	Open in IMG/M
3300012181\|Ga0153922_1080964	Not Available	730	Open in IMG/M
3300012202\|Ga0137363_10399299	Not Available	1145	Open in IMG/M
3300012202\|Ga0137363_11645337	Not Available	534	Open in IMG/M
3300012203\|Ga0137399_10947955	Not Available	725	Open in IMG/M
3300012362\|Ga0137361_11410834	Not Available	620	Open in IMG/M
3300012362\|Ga0137361_11606844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	571	Open in IMG/M
3300012951\|Ga0164300_10946374	Not Available	549	Open in IMG/M
3300012957\|Ga0164303_11222186	Not Available	551	Open in IMG/M
3300016371\|Ga0182034_10026025	All Organisms → cellular organisms → Bacteria → Proteobacteria	3579	Open in IMG/M
3300016404\|Ga0182037_10272504	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300016404\|Ga0182037_10742089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → unclassified Ardenticatenia → Ardenticatenia bacterium	843	Open in IMG/M
3300016422\|Ga0182039_11187602	Not Available	689	Open in IMG/M
3300018042\|Ga0187871_10325845	Not Available	849	Open in IMG/M
3300020581\|Ga0210399_10022113	All Organisms → cellular organisms → Bacteria	5041	Open in IMG/M
3300020582\|Ga0210395_11414138	Not Available	507	Open in IMG/M
3300020583\|Ga0210401_11470537	Not Available	539	Open in IMG/M
3300021046\|Ga0215015_10810883	Not Available	710	Open in IMG/M
3300021046\|Ga0215015_10948073	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300021168\|Ga0210406_10348671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1195	Open in IMG/M
3300021178\|Ga0210408_10039142	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3728	Open in IMG/M
3300021178\|Ga0210408_10583381	Not Available	886	Open in IMG/M
3300021180\|Ga0210396_10298618	Not Available	1426	Open in IMG/M
3300021180\|Ga0210396_10921643	Not Available	744	Open in IMG/M
3300021361\|Ga0213872_10103136	Not Available	1270	Open in IMG/M
3300021361\|Ga0213872_10154292	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300021361\|Ga0213872_10262293	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	725	Open in IMG/M
3300021405\|Ga0210387_10070428	Not Available	2859	Open in IMG/M
3300021405\|Ga0210387_10074349	All Organisms → cellular organisms → Bacteria	2787	Open in IMG/M
3300021405\|Ga0210387_11077515	Not Available	701	Open in IMG/M
3300021407\|Ga0210383_11739222	Not Available	510	Open in IMG/M
3300021439\|Ga0213879_10018853	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300021439\|Ga0213879_10195837	Not Available	599	Open in IMG/M
3300021444\|Ga0213878_10142910	Not Available	990	Open in IMG/M
3300021444\|Ga0213878_10211389	Not Available	818	Open in IMG/M
3300021444\|Ga0213878_10354565	Not Available	634	Open in IMG/M
3300021474\|Ga0210390_10186673	Not Available	1753	Open in IMG/M
3300021479\|Ga0210410_11359158	Not Available	603	Open in IMG/M
3300022557\|Ga0212123_10103908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2310	Open in IMG/M
3300022557\|Ga0212123_10206600	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300025900\|Ga0207710_10359736	Not Available	742	Open in IMG/M
3300025910\|Ga0207684_10529758	Not Available	1009	Open in IMG/M
3300025910\|Ga0207684_10675636	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300025939\|Ga0207665_10219260	Not Available	1393	Open in IMG/M
3300026551\|Ga0209648_10105490	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300026551\|Ga0209648_10798880	Not Available	516	Open in IMG/M
3300026555\|Ga0179593_1213725	Not Available	1721	Open in IMG/M
3300027610\|Ga0209528_1086078	Not Available	695	Open in IMG/M
3300027698\|Ga0209446_1133997	Not Available	640	Open in IMG/M
3300027812\|Ga0209656_10001031	All Organisms → cellular organisms → Bacteria	17982	Open in IMG/M
3300027812\|Ga0209656_10011746	All Organisms → cellular organisms → Bacteria	5505	Open in IMG/M
3300027812\|Ga0209656_10043765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2573	Open in IMG/M
3300027812\|Ga0209656_10160673	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300027812\|Ga0209656_10237940	Not Available	866	Open in IMG/M
3300027812\|Ga0209656_10415079	Not Available	601	Open in IMG/M
3300027824\|Ga0209040_10060563	Not Available	2248	Open in IMG/M
3300027824\|Ga0209040_10132501	Not Available	1368	Open in IMG/M
3300027825\|Ga0209039_10176461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	878	Open in IMG/M
3300027884\|Ga0209275_10662270	Not Available	601	Open in IMG/M
3300027889\|Ga0209380_10723105	Not Available	570	Open in IMG/M
3300027895\|Ga0209624_11141612	Not Available	500	Open in IMG/M
3300028047\|Ga0209526_10060311	All Organisms → cellular organisms → Bacteria	2670	Open in IMG/M
3300028047\|Ga0209526_10153771	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300028047\|Ga0209526_10259975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300028047\|Ga0209526_10895099	Not Available	540	Open in IMG/M
3300028863\|Ga0302218_10099941	Not Available	912	Open in IMG/M
3300029636\|Ga0222749_10783298	Not Available	522	Open in IMG/M
3300029944\|Ga0311352_10039842	Not Available	4359	Open in IMG/M
3300030580\|Ga0311355_10376877	Not Available	1397	Open in IMG/M
3300030618\|Ga0311354_11177474	Not Available	695	Open in IMG/M
3300031023\|Ga0073998_11616834	Not Available	641	Open in IMG/M
3300031234\|Ga0302325_10776245	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300031573\|Ga0310915_11037413	Not Available	571	Open in IMG/M
3300031708\|Ga0310686_100554522	Not Available	1546	Open in IMG/M
3300031708\|Ga0310686_102374461	Not Available	968	Open in IMG/M
3300031708\|Ga0310686_106988043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	637	Open in IMG/M
3300031719\|Ga0306917_10430885	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300031890\|Ga0306925_10074293	All Organisms → cellular organisms → Bacteria → Proteobacteria	3580	Open in IMG/M
3300031910\|Ga0306923_12364075	Not Available	528	Open in IMG/M
3300031941\|Ga0310912_11371600	Not Available	534	Open in IMG/M
3300031962\|Ga0307479_10158726	All Organisms → cellular organisms → Bacteria → Proteobacteria	2220	Open in IMG/M
3300032059\|Ga0318533_10582712	Not Available	821	Open in IMG/M
3300032205\|Ga0307472_102349622	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300032892\|Ga0335081_12669779	Not Available	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.74%
Host-Associated	Host-Associated	5.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.93%
Aquatic	Environmental → Aquatic	21.80%
Plants	Host-Associated → Plants	4.51%
Fungi	Host-Associated → Fungi	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.17%
Freshwater	Environmental → Aquatic → Freshwater	16.54%
Thermal Springs	Environmental → Aquatic → Thermal Springs	5.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.51%
Peat	Environmental → Terrestrial → Peat	3.76%
Mycelium	Host-Associated → Fungi → Mycelium	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.36%
Loam	Environmental → Terrestrial → Soil → Loam	19.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.54%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	5.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.02%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	5.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.01%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	15.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	3.76%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.26%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.75%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1005494853	3300000364	Soil	VLKDSAGMDLPPPARKTIDLEGKLVKDAVRKAIRDRQTVLNDLVHAVREYRKIAESKPLTLQGSDDAYAVQEMNKAIDWAEALLQ*
JGI1027J12803_1061566602	3300000955	Soil	GRLVKDAVRKTLKDRQKALTQLIEAVREYRKLAEQPLTLRGSEYAHAVQELNNAMDRAETLLD*
JGIcombinedJ26739_1003153382	3300002245	Forest Soil	VLKDSAGMELPPPPRKTIDLEGRLVKDGVRTAIKERQIALTDLVHATREYRKLAESKPLTLQGSDYAHAVQELNKAIDRAEGLIPL*
JGIcombinedJ26739_1008200651	3300002245	Forest Soil	LQEIRWVLKDAARLELPPPARKTIDLEGRIVKDGVRKAIQDRQLALAELVHAIKQFRKIADSQPLTLQGSEYPHAVQELNKAIDRAEGLLR*
JGI26341J46601_100166291	3300003219	Bog Forest Soil	AWEILQEIRWVLKDVAALELPPAVRKTFDLEGRVVKDAVRKALKDRQKALADLVHAVREYRKLVDEPLTLRGSEYANAVQNLNKAIDRAEGLLQ*
JGI26341J46601_100241113	3300003219	Bog Forest Soil	VAGVELPAPARKTIDLEGRIVKDGVRRVVKDRQLALGELLKAIREFRKFNDQPLTLXGGNYAQAVHALNKAIDRADGLLQS*
JGI26341J46601_100371352	3300003219	Bog Forest Soil	LPPPARKTIDLEGRIVKDGVRKAVKDRQTALDGLVKAVLEFRKFTDEPLTLRGSDYAHAVQELNKAIDRGAELLQ*
JGI26341J46601_100591273	3300003219	Bog Forest Soil	VLKDAARMDLPPPARKKIDLEGRIVKDGVRKALMDRQLVLGDLVHAIREYRKIAEKQPLTLQGSDYAHAVHELNKAIDRADGLLLQ*
JGI26341J46601_100652682	3300003219	Bog Forest Soil	VLKDTIGIEAQQPARKTIDLEGRVVKEAVRNALQDQHKALLNLIHAIREYRKQADQPLTLRGSEYAHAVHQLNKAIDRAEDLLQN*
JGI26340J50214_100005807	3300003368	Bog Forest Soil	VAGVELPAPARKTIDLEGRIVKDGVRRVVKDRQLALGELLKAIREFRKFNDQPLTLRGGNYAQAVHALNKAIDRADGLLQS*
JGI26340J50214_101887151	3300003368	Bog Forest Soil	IDLEGRVVKEAVRNALQDQHKALLNLIHAIREYRKQADQPLTLRGSEYAHAVHQLNKAIDRAEDLLQN*
Ga0062386_1009517591	3300004152	Bog Forest Soil	VELPAPARKTIDLEGRIVQDGVRKAVKDRQIALDVLLKAIREFRKHTDEPLTLRGSDYAHAVQELNKAIDRADGLLL*
Ga0062386_1013092171	3300004152	Bog Forest Soil	AGVELPPPARKTIDLEGRIVKDGVRKTVKERQVALDDLVIAIREFRKFTDQPLTLRGGDYAHAVQELNKAIDRAERLLAQ*
Ga0062386_1016263792	3300004152	Bog Forest Soil	RWVLKDAIGVDLPPPARKTIDLEGRIVKDGVRKAVKDRQLALEELVKAIREFRKFTDQPLTLRGGDYAGAVQALNKAIDRATGLLQ*
Ga0062388_1021109512	3300004635	Bog Forest Soil	IRWVLKDVADLDLPPPARKTIDLEGRLVKDGVRTTLRDRQDALSELVEAIRKYRNLAEETPLTLQGSDFAQAVENLNKAIDRADGLLLH*
Ga0070709_113264522	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MELPPPARKTIDLEGRIVKDGVRKALQDRQIALTNLVHAIQEYRKLAEATPLTLQGSPYAHAVLELNKAIDRAEALCSKD*
Ga0070711_1015524251	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKLPPPAKKTIDLEGRLIKDGVRKAIRDRQNALHELLNAINQYRKVSESKPLTLQGSDYAHAVLELNKAIDR*
Ga0070706_1006551931	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIDLEGQLVRDGIRKALKDRQTALTELVHAVRDYRHLADQLFTLRGSEYTHAVQELNKAIDRGEGLL
Ga0070699_1007009792	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIDLEGQLVRDGIRKALKDRQTALTELVHAVRDYRHLADQLFTLRGSEYTHAVQELNKAIDRGEGLLQ*
Ga0070697_1001954042	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLNEATGIELPAPARKTIDLEGRIVKDAVRKVVKDRQLALDGLLKAICESRKFTDQPLTLRGGDYPHAAQELNKAINRAKGLLQS*
Ga0070697_1014641921	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLKDVTGFEIPPPARKTIDLEGRLVKDGVRKALEDQRNVLNELTHAIRDYRKFCEQPSTLRGSDYAHAVQELNKAIDR
Ga0070697_1019252552	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	WENLAEIRWVVKDTCGIDLPPPARKTIDLEGRIVKDGVKKALRDRQLALAELVHAIQHYRKVVDSKTLTLLGSEYPHAVQELNKAIDRAEGLLLL*
Ga0070763_108272202	3300005610	Soil	KRAWENLQEIRWVLKDVAGIELPPPARKTIDLEGRIVKEGVRTALRDRQLALAELVHAIREYRMIADSKPLTLQGSDYAHAVHELNKAIDRAEGLVLR*
Ga0066903_1056046922	3300005764	Tropical Forest Soil	KTIDSEGRVVKEAVRRALQERQTVLAVLTHAIREYRKLSDQPFTLRGSEYALAVQELNKAIGRAQEILQ*
Ga0070766_100868881	3300005921	Soil	DLEGRLVKDGVRKALEDRQKVISELLDAIRGYRKLADQPLTLRGSEYAQAVQTLNRAIDRADRLLQ*
Ga0070716_1009448811	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSPPARKTIDLEGRIVKDGVKKALRDRQLALAELVHAIQHYRKVVDSKTLTLLGSEYPHAVQELNKAIDRAEGLLLL*
Ga0070712_1008970591	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KDRQKALTQLIEAVREYRKLAEQPVTLRGSEYAHAVQELNKAMDRAETLLD*
Ga0073928_100500654	3300006893	Iron-Sulfur Acid Spring	VLTDVCGIKLPPPARKTIDLEGRLVKDGVRTALRNRQEALSELLEAIRKYRKLSEKTPLTLQGADFAQAVDELNKAIDPADGLMLH*
Ga0073928_101085902	3300006893	Iron-Sulfur Acid Spring	MILGGNLSEVIARKTIDLEGRIVKDGVRKAIRDRQLALEGLVHAIGEYRKLAESTPLTLQESDYAHAVHELNKAIDRAEGLLR*
Ga0073928_101963883	3300006893	Iron-Sulfur Acid Spring	IRWVIKDIAGIDLPPPARKTIDLEGRLVKDGVRKSLKDRQNALTELVHAIREYRKLADKPLTLQGSEYAHAVQELK*
Ga0073928_102302931	3300006893	Iron-Sulfur Acid Spring	QEIRWVLKDITGMDLPPPARKTIDLEGRLVKDGVRTALRDRQEALSELVEAIRKYRKLAEETPRTLQGADCAQAVEELNKAIDRAEGLILH*
Ga0073928_106090241	3300006893	Iron-Sulfur Acid Spring	SRKRAGENLQEIRWVIKDIAGMELPPPARKTIDLEGRVVKDGVRTALRDRQEALSELVEAIHKYRKLAEKTPLTLQGADFAQAIEELNKAIDRAEGLLLH*
Ga0105247_101540751	3300009101	Switchgrass Rhizosphere	RLVKDAVRKTLKDRQKALTQLIEAVREYRKLAEQPVTLRGSEYAHAVQELNKAMDRAETLLD*
Ga0116217_108606982	3300009700	Peatlands Soil	RWVLKDVAGVEAPLPAKKTIDLEGRLVKEGVRKALQDRQKAISELLDAIRGYRKLADQPLTLRGSEYAQAVQTLNRAIDRADRLLQ*
Ga0126382_121051521	3300010047	Tropical Forest Soil	NLQDIRWVLKDIAGINLPAPARKTIDSEGRTVKDGVRKALRERQDALVGLFKAIREYRKFGDQPLTLRGSEYAHALQELHKAIDTADRLVS*
Ga0074046_100298473	3300010339	Bog Forest Soil	VLKDTAGIDLPAPARKTIDLEGRIVKDGVRNTVKDRQVVLDELVKAIREFRNFTDQPLTLRGGDYAHAVQELNNAIDRADLLLR*
Ga0074046_100376945	3300010339	Bog Forest Soil	ELPAPARKTIDLEGRIVQDGVRKAVKDRQIALDVLLKAIREFRKHTDEPLTLRGSDYAHAVQELNKAIDRADGLLL*
Ga0074046_101899881	3300010339	Bog Forest Soil	TAGIEAQQPTKKTIDLEGRVVKEAVRNALQDRRKALTNLIHAIREYRKLADQPLTLRGSEYAHAVQELNKAIDRVGYVPS*
Ga0074046_108243721	3300010339	Bog Forest Soil	VELPPPARKTIDLEGRIVKDGVRKTVKERQVALDDLVIAIREFRKFTDQPLTLRGGDYAHAVQELNKAIDRAERLLAQ*
Ga0074045_100183261	3300010341	Bog Forest Soil	VLKDAAGVELPPPARKTIDLEGRIVKDGVRKTVKERQVALDDLVIAIREFRKFTDQPLTLRGGDYAHAVQELNKAIDRAERLLAQ*
Ga0126381_1006107754	3300010376	Tropical Forest Soil	DATGIDLRKAPRKTIDSEGRVIKDGVVKDRQAALGDLLRAIREFHKFGVQPLTLRGSEYAHTLQDPNKAIDRAEGLLQT*
Ga0126381_1032643271	3300010376	Tropical Forest Soil	VGLKDVAGIDLSPPARKTIDCEGRIVKDGARKALRERQDALAALVRAIREYRKFGDQPLTLRGSEYAHALQELHKAIDTADRLMS*
Ga0136449_1030646511	3300010379	Peatlands Soil	VLKDTAGVELPPPARKTIDIESRIVKDGVRKTVKTIKPSWTGLVRAIREFRKFTDQPLTLRGSDYAHAVQELNKAIARAEGL
Ga0136449_1044157832	3300010379	Peatlands Soil	WEILQEIRWVLKEAAGMDLPPAARKTIDLEGRLVKDAVRKTLKDRQNALTDLIRAIRDFRNFVDQPLTLRGSEYAHAVQELNKAIDRAEKLLQ*
Ga0134122_129956852	3300010400	Terrestrial Soil	VCGIKLSPPARKTIDLEGRIVKDGVRKALRDRQDALSELVTAVRLYKNLAQSKPLTLQESDYAKAVEELNKAIERAEGLLSR*
Ga0126357_12566061	3300010864	Boreal Forest Soil	WEILQEIRWVLKETAGTELPPPARKTIDLEGRLVKDAVRKSLKDRQNALTNLIHAIRELRELVDQPLTLRGSDYAQAVQELNKAIDCAEQLLQ*
Ga0150983_112685382	3300011120	Forest Soil	LKDVTGVEAPLPAKKTIDLEGRLVKDGVRKALEDRQKVISELLDAIRGYRKLADQPLTLRGSEYAQAVQTLNRAIDRADRLLQ*
Ga0153922_10809642	3300012181	Attine Ant Fungus Gardens	VTTEELYRLVAIDLEGRVVKDGVRKIVKERQLALHDLVHAIHEFRKFTDQPLTLRGSDYAHAVQELNKAIDRANDLLQL*
Ga0137363_103992991	3300012202	Vadose Zone Soil	EIRWVLKDIAGIDLPPPARKTIDIEGRLVKDGVRTALRDRQEALSELIEAIRKYRKLAEKTPLTLQGADFPQAVEELNKAIDRAEGLLVQ*
Ga0137363_116453371	3300012202	Vadose Zone Soil	ELPPAARKTIDLEGRVVKEGVRKSLKACQIIIEELVHAIREYRKASEQPLTLRGSECAHAVQELNKAIDRADRLLR*
Ga0137399_109479552	3300012203	Vadose Zone Soil	VLKDVGGMDLQPPARKTIDLEAPLVKEGVRKALKDRQNVLTDLIQAVREYRKLSDQPLTLRGSEYAHAVQELNKAIDRAEAFLQ*
Ga0137361_114108341	3300012362	Vadose Zone Soil	LPPPARKTIDLEGRLVKDGVRTALRDRQDALSELVEAIRKYRKLAEKTPLTLQGSDFAQAVEELNKAIDRAEGLILH*
Ga0137361_116068441	3300012362	Vadose Zone Soil	LQEIRWVLKDTAGIELPPPARKTIDLEGRLVKDSVRKSIKDRQNAITDLIHAVREYRKLADKPLTLEGSGYAHAVLELNKAIDRAEGLLQ*
Ga0137397_102296522	3300012685	Vadose Zone Soil	AEIRWVLTDVCGIKLPPPARKTIDLEGRIVKDGVKKALRDRQLALVELVHAVREYRRIAESKPLTLQGQRISAGRS*
Ga0164300_109463741	3300012951	Soil	SGIDLPAPVRKTTDAERRIVKDGVRKVIRERQEALRELVHAIWEYRRLAESKPITLQGGDFAHSVSGLNKAIEKAGQLLRG*
Ga0164303_112221861	3300012957	Soil	TVGIELPPPARKTIDLEGRIVKDGVRKALRGRQLALAELVHAIKQFRKIADRKPLTLQGASYAQAVHELHKPTDRAEGLLITNLSLWKMPLR*
Ga0182034_100260257	3300016371	Soil	AVRKALQERQTALAGLMHAIREYRKLSDQPFTLRGSEYAQAVQELNKAIGRAQEILQ
Ga0182037_102725041	3300016404	Soil	RKALQERQTALAGLMHAIREYRKLSDQPFTLRGSEYAQAVQELNKAIGRAQEILQ
Ga0182037_107420891	3300016404	Soil	AVRKALQERQTALAGLMHAIREYRKLSDQRFALRGSEYAQAVQELNKAIGCAQEILQ
Ga0182039_111876022	3300016422	Soil	VKDAVRKALQERQTALAGLMHAIREYRKLSDQRFALRGSEYAQAVQELNKAIGCAQEILQ
Ga0187871_103258452	3300018042	Peatland	RWVLKDAAGIELPAPARKTIDLEGQIVKDGVRKTVKDRQIALDMLLKAIREFRKFTDQPLTLRGGDYTHAVQGLNKAIDRADGHLL
Ga0187784_115036611	3300018062	Tropical Peatland	SRKRAWENLQEIRWVLKDVTGIELSPPARKTIDLEGRIVKDGVRKILTDRQVALDQLVKAIREFRKFTDQPLTLQGGDYAGLSRR
Ga0210399_100221135	3300020581	Soil	MGTPAGDPLGTQRRHRVEAPLPAKKTIDLEGRLVKDGVRKALEDRQKVISELLDAIRGYRKLADQPLTLRGSEYAQAVQTLNRAIDRADRLLQ
Ga0210395_114141382	3300020582	Soil	LLAPARKTIDLEGRLVKDGIRKALQERQKVLGDLVQAIREYRKLSDQPLTLRGSEYAHSILELNKAIERAEGLLTG
Ga0210401_114705371	3300020583	Soil	LHEIRWVLKDSAGMELPPPGKKTIDLEGRIVKDGVRKAIRDRQIVLTELVLAIRDFRKIATSKPLTLQGSDYARALQESNKAIDRAGDFTQIC
Ga0215015_108108832	3300021046	Soil	MEIPPPAKKTIDLEGRLVKDGVRKAIKDRQTALTDLIHAVREYQKLAGKPLTLQGSEYAHAVQELNKAIDRAEALSQ
Ga0215015_109480732	3300021046	Soil	VLKDTAGIEAQQPARKTIDLEGRVVKEAVRNALQDRHKALTDLIHAIREYRKAAEQPLTLRGSEYAHAVQQLNKAIDRAEDLLQN
Ga0210406_103486712	3300021168	Soil	VLKDVTGVEAPLPAKKTIDLEGRLVKDGVRKALEDRQKVISELLDAIRGYRKLADQPLTLRGSEYAQAVQALNRAIDRADRLLQ
Ga0210408_100391422	3300021178	Soil	VLKEIAGIELPPPARKTIDLEGRLVKDGVRTALRDRQDALSELVEAIRKYRKLAEKTPLMLQGADFAQAVDELNKAIDRAEGLMLH
Ga0210408_105833811	3300021178	Soil	LKDTVGIELPPPARKTIDLEGRLVKDAVLKALKDRQNALTDLIHAIREYRKRADQPSALQGSEYPHAVLELNKAIDRAEGFLQ
Ga0210396_102986182	3300021180	Soil	VLQDSAGMNLPPPAKKTIDLEGRLVKDGVRKAIRDRQNVLHELVTATNQYRKLLERKPLTLQGSEYAQALLELNKAIDHAEGLLLQ
Ga0210396_109216431	3300021180	Soil	VLKDTAGVELPPPARKTIDAEGRLVKDGVRKALTQRRTALEDLVRAVRQYRTLAEKQPLTLQGSGYAHAVHELNTAIDRAEGLLQ
Ga0213872_101031362	3300021361	Rhizosphere	MALRDTAGVELPAPARKTIDLEGRIVKDGVRKVVRDRQAALKDLLSAVREFRKFTDEPLTLRGSEYAHALLELNRAIDRADEILTG
Ga0213872_101542921	3300021361	Rhizosphere	TGVDLPRPKRKTIDLEGRIVKDGVRAVVKDRQIALDGLVKAIREFRKFTDQPLTLRGADYAHAVQELNKAIDRASALLHVC
Ga0213872_102622931	3300021361	Rhizosphere	LKDVAGVELPPPAKKTIDLEGRIVKDGVRRVVKDRQLALGELLKAIREFRKFNDQPLTLRGGDYAQAVQSLNKAIDRADGLLQP
Ga0210387_100704285	3300021405	Soil	VVKDTTGVEFPPPDRKTIDLEGRLVKDGVKKVIGDRQLALADLVHAIMHYRQIAEAKPLTLQGADYAQAVQDLDKAIDRAGALLR
Ga0210387_100743495	3300021405	Soil	RAWEILQEIRWVLKDTAGMEIKPPAKKTIDLEGRMVKDGVRTALKDRQNALTNLIHAIGEYRKFADQPRTLQGSEYANAVQELNKAIDRAEGLCQ
Ga0210387_110775151	3300021405	Soil	VLKDTAGVELPPPARKTIDAEGRLVKDGVRKALTQRRTALEDLVRAVRQYRTLAEKQPLTLQGSDYAHAVHELNTAIDRAEGLLQ
Ga0210383_117392221	3300021407	Soil	VLGISEIRRVLKHSGGLDLEPPERKTIDLEGRPVKDGVRKAPRGRQLALADPVHAVRECRKLAETHPLVLQGSDYPHAVQELNKAI
Ga0213879_100188532	3300021439	Bulk Soil	MKMGSNRRPAPARKTIDLEGRIVKDGVRRVVKDRQLALAELLKAIREFRKFNDQPLTLRGGDYAQAVQSLNKAIDRANGLLQP
Ga0213879_101958372	3300021439	Bulk Soil	RPKRKTIDLEGRIVKDGVRAVVKDRQIALVGLVKAIREFRKFTDQPLTLRGADYAHAVQELNKTIDRASALLQFSNNVC
Ga0213871_101717912	3300021441	Rhizosphere	VVKEAVRKTLQERQKAITDLLNAIREYRTLADQPLTLRGSNYAQAVQNLNK
Ga0213878_101429102	3300021444	Bulk Soil	APARKTIDLEGRIVKDGVRKTVKDRQLALDELLKAVSEFRKYTDQPLTLREGNYAHAVQALNKAIDRAQIFLFSY
Ga0213878_102113891	3300021444	Bulk Soil	MGSNRRPAPARKTIDLEGRIVKDGVRRVVKDRQLALGELLKAIREFRKFNDQPLTLRGGDYAQAVQSLNKAIDRA
Ga0213878_103545651	3300021444	Bulk Soil	NLQEIRWVLKDVAGVELPPPARKTIDLEGRIVKDGVRRVVKDRQLALGELLKAIREFRKFNDQPLTLRGGDYAQSVQSLNKAIDRADGLLQP
Ga0210390_101866734	3300021474	Soil	MEIKPPAKKTIDLEGRLVKDGVRKALKDRQNALTNLIHAIREYRKFADQPLTLPGFESAHAVQELNKAIDRAEGLLQ
Ga0210410_113591581	3300021479	Soil	LKDTAGIDLPAPARKTIDLEGRIVKDGVRNAVKDRQNALDMLVKAIREFRKFTDQPLTLRGGDYAHAVQELNKAIDRADGLLL
Ga0212123_101039084	3300022557	Iron-Sulfur Acid Spring	APLPAKKTIDLEGRLVKDGVRKALEDRQKVISELLDAIRGYRQLADQPLTLRGSEYAQAVQTLNRAIDRADRFLR
Ga0212123_102066003	3300022557	Iron-Sulfur Acid Spring	MGAQQPTKKRFDLEGRVVKEAVRNALQDRRKTLTKLIRAFREYRKLADQPLTLRGSEYAHAVQELNKGD
Ga0207710_103597361	3300025900	Switchgrass Rhizosphere	RLVKDAVRKTLKDRQKALTQLIEAVREYRKLAEQPVTLRGSEYAHAVQELNKAMDRAETLLD
Ga0207684_105297582	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGAQRCGRDGASTARPKMIDLEGQLVRDGIRKALKDRQTALTELVHAVRDYRHLADQLFTLRGSEYTHAVQELNKAIDRGEGLLQ
Ga0207684_106756362	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLKDTTGIDLPAPARKTIDLEGRLVKDAVRKALQERQKVVKDLVQVIREYRKLSDQPLTLRGSEYAHSVLELNKAIERSEGLLTG
Ga0207665_102192604	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VRKTLKDRQKALTQLIEAVREYRKLAEQPVTLRGSEYAHAVQELNKAMDRAETLLD
Ga0209648_101054901	3300026551	Grasslands Soil	MSKTPKEAVRNALQDRQKALTDLIHAIREYRKLADQPLTLRGSEYAHAVQQLNKAIDRAKELLQ
Ga0209648_107988802	3300026551	Grasslands Soil	KDVTGMDLPPPARKTIDLEGRLVKDGVRTALRDRQDALSELVEAIRKYRKLAEKTPLTLQGSDFAQAVEELNKAIDRAEGLLVH
Ga0179593_12137251	3300026555	Vadose Zone Soil	VIKDSVGIDLPPPARKTIDLEGRIVKDGVKKALRDRQLALAELVHAMQHYRKVADSKPLTLQGSEYPLAVQELNQA
Ga0209528_10860781	3300027610	Forest Soil	LKDVTGVDLPPPARKTIDLEGRLVKDGVRTALRDRQDALSELVEAIRKYRKLAEKTPLTLQGSDFAQAVEELNKAIDRAEGLMLH
Ga0209446_11339972	3300027698	Bog Forest Soil	VLKDTAGIEAQQPTKKTIDLEGRVVKEAVRNALQDRRKALTNLIHAIREYRKLADQPLTLRGSEYAHAVQELNKAIDRVGYV
Ga0209656_1000103113	3300027812	Bog Forest Soil	VAGVELPAPARKTIDLEGRIVKDGVRRVVKDRQLALGELLKAIREFRKFNDQPLTLRGGNYAQAVHALNKAIDRADGLLQS
Ga0209656_100117461	3300027812	Bog Forest Soil	VLKDAAGVELPPPARKTIDLEGRIVKDGVRKTVKERQVALDDLVIAIREFRKFTDQPLTLRGGDYAHAVQELNKAIDRAERLLAQ
Ga0209656_100437654	3300027812	Bog Forest Soil	VLKDTIGIEAQQPARKTIDLEGRVVKEAVRNALQDQHKALLNLIHAIREYRKQADQPLTLRGSEYAHAVHQLNKAIDRAEDLLQN
Ga0209656_101606732	3300027812	Bog Forest Soil	VLKDTAGIEAQQPTKKTIDLEGRVVKEAVRNALQDRRKALTNLIHAIREYRKLADQPLTLRGSEYAHAVQELNKAIDRVGYVPS
Ga0209656_102379402	3300027812	Bog Forest Soil	RKRAWENLQEIRWVLKETAGVELPPPARKTIDLEGRIVKDGVRKALRDRQLAVDELLKAIREFRKFTDQPLTLRGSDYAHAVQELNKAIDRADKLLQ
Ga0209656_104150791	3300027812	Bog Forest Soil	RKTIDLEGRVVKDAVRKSLKDRQKAITDLLHAVREYRKLVDQPLTLRGSEYAHAVQDLNKAIDRAEGLLQ
Ga0209040_100605633	3300027824	Bog Forest Soil	VLKDAARMDLPPPARKKIDLEGRIVKDGVRKALMDRQLVLGDLVHAIREYRKIAEKQPLTLQGSDYAHAVHELNKAIDRADGLLLQ
Ga0209040_101325011	3300027824	Bog Forest Soil	LVKDGVRKALQEHQKVLRDLVQAIREYRKLSDQPLTLRGSEYAHSVLELNKAIERADNLIQV
Ga0209039_101764613	3300027825	Bog Forest Soil	RAWELLQEIRWVLKDVTGVEAPLPAKKTIDLEGRLVKDGVRKALEDRQKVISELLDAIRGYRKLADQPLTLRGSEYAQAVQTLNRAIDRADRLLQ
Ga0209275_106622701	3300027884	Soil	KDVTGVELPPPAKKTIDLEGRVVKDGVRTALRDRQDALGESIEAIRKYRKLAEKTPLTLQGADFAQAVEELNKAIDRSEGLMLH
Ga0209380_107231051	3300027889	Soil	WVLKETAGVELPPSARKTIDLEGRIVKDGVRKALKDRQLAVDDLVKAIREFRKFTDQPLTLRGSDYAHAVQELNKAIERAEDFTQIC
Ga0209624_111416122	3300027895	Forest Soil	GLKDITGTDLPAPERKTIDLEGRIVKDGVRKALRDRQLVLANLVHAVREYRKLAESKPLTLQGADYAHAVQELNKAIERAEDVLQ
Ga0209526_100603112	3300028047	Forest Soil	MDLQPPARKTIDLEGRLVKDGVRKALKDRQNVLTDLIQAVREYRKLSDQPLTLRGSEYAHAVQELNKAIDRAEAFLQ
Ga0209526_101537712	3300028047	Forest Soil	MELPPPPRKTIDLEGRLVKDGVRTAIKERQIALTDLVHATREYRKLAESKPLTLQGSDYAHAVQELNKAIDRAEGLIPL
Ga0209526_102599751	3300028047	Forest Soil	VVKDTVGVELPPARKTIDLEGRIVKDGVRKELRDRQLALAELVHAIQHYRKVADSKPLTGSDYAHAVHELNKTIDRAEGFLSR
Ga0209526_108950991	3300028047	Forest Soil	LHEIRWVLKDSAGMELPPPGKKTIDLEGRIVKDGVRKAIRDRQIVLTELVLAIRDFRKIATSKPLTLQGSDYAQCASGVEQSD
Ga0302218_100999411	3300028863	Palsa	WVLKDTAGIEAQQPVRKTIDLEGRVVKDAVRKTLRDRQNALTHLIHAVCEYRKLAEQSPTLRGSEYAHAIQELNKAIGRAEELLQ
Ga0222749_107832982	3300029636	Soil	APARKTIDLEGRLVKDGVRKALQERQKVLGDLVQAIREYRKLSDQPLTLRGSEYAHSVLELNKAIERAEGLLTG
Ga0311352_100398427	3300029944	Palsa	LQEIRWVLKDTAGIEAQQPARKTIDLEGRVVKDAVRKTLRDRQNALTHLIHAVCEYRKLAEQSPTLRGSEYAHAIQELNKAIGRAEELLQ
Ga0311355_103768774	3300030580	Palsa	GIEAQQPARKTIDLEGRVVKDAVRKTLRDRQNALTHLIHAVCEYRKLAEQSPTLRGSEYAHAIQELNKAIGRAEELLQ
Ga0311354_111774741	3300030618	Palsa	VLKDTTGIELPPPARKSIDLEGRVVKDGVRKALRDRQLGLTELVHAIRHFRQIADSKPLTLQGSEYPQAVQELNK
Ga0073998_116168341	3300031023	Soil	ICIIILFYFPPARKTIDLEGRLVKDAVRKTLKDRQSALTNLIHAIRELRKLVDQPLTLRGSDYAHAVQELNKAIDRAEELLQ
Ga0302325_107762451	3300031234	Palsa	IRWVLKDTTGIELPPPARKSIDLEGRVVKDGVRKALRDRQLGLTELVHAIRHFRQIADSKPLTLQGSEYPQAVQELNKAIDRADGLLQ
Ga0310915_110374131	3300031573	Soil	KTIDSEGRVVKDAVRKALQERQTALAGLMHAIREYRKLSDQRFALRGSEYAQAVQELNKAIGCAQEILQ
Ga0310686_1005545223	3300031708	Soil	LKDITGMDLPPPARKTIDLEGRLVKDGVRTALRDRQDALSELVEAIRKYRKLAEKTPLTLQEADFAQAVEDLKKAIDRAEGLIVQ
Ga0310686_1023744611	3300031708	Soil	VLKDAAGVELPPPARKTIDLEGRIVKDGVRKTVKDRQVALDGLVKAIREFRKFTDEPLTLRGSDYAHAVQELNKAIDLAHRLR
Ga0310686_1069880431	3300031708	Soil	AGIEAQKPTRRTIDLEGRVVKEVVRNALRDRQKALTDLIDAIREYRKLANEPLTLRGSEYAHAVQELNKAIDRAEELLQ
Ga0306917_104308851	3300031719	Soil	SPPVRKTIDSEGRVVKDAVRKALQERQTALAGLMHAIREYRKLSDQPFALRGSEYAQAVQELNKAIGRAQEILQ
Ga0306925_100742931	3300031890	Soil	SVKKTIDSEGRVVKEAVRKALQERQTALAGLMHAIREYRKLSDQPFTLRGSEYAQAVQELNKAIGRAQEILQ
Ga0306923_123640752	3300031910	Soil	VSPPVRKTIDSEGRVVKDAVRKALQERQTALAGLMHAIREYRKLSDQRFALRGSEYAQAVQELNKAIGCAQEILQ
Ga0310912_113716001	3300031941	Soil	PARKTIDLEGRVVKEGVRKIVNDRQVALQNLVHAIGEFRKFTDQPLTLRGSDYAHAVQELNKAIDRATNLLQFMSLQSGPPCFLRQRK
Ga0307479_101587263	3300031962	Hardwood Forest Soil	RWILKDATGIDLPAPARKTIDLEGRVVKEGVRKIVNDRQLALQNLAHAINEFRKFTDQPLTLRGSDYAHAVQELNKAIDRANDLLHL
Ga0318533_105827122	3300032059	Soil	GRVVKEAVRKALQERQTALAGLMHAIREYRKLSDQPFTLRGSEYAQAVQELNKAIGRAQGILR
Ga0307472_1023496221	3300032205	Hardwood Forest Soil	VGAEGHGRHRAAAPKRKTIDLEGRIVRDGVRTVVKDRQLALGELLKVIREFRKFTDEPLTLRGGDYAHAVRQLNKAIDRASGLLQS
Ga0335081_126697791	3300032892	Soil	LQEIRWVLKDVAGVELPPPARKTIDLEGRIVKDGVRRVAKDRQLALGELLKAIREFRKFNDQPLTLRGGDYAQAVQSLNEAIDRADGLLQS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060270

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences