Metagenome / Metatranscriptome Family F060267

Basic Information
Family ID	F060267
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	47 residues
Representative Sequence	TTATFSFETGHTTFKSINWGRADEQLSSGLDYRKDDIIRVAQQLLSKLPR
Number of Associated Samples	103
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	97.74 %
% of genes from short scaffolds (< 2000 bps)	93.23 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (87.970 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.090 % of family members)
Environment Ontology (ENVO)	Unclassified (51.880 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.632 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.51% β-sheet: 11.54% Coil/Unstructured: 67.95%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF04392	ABC_sub_bind	27.82
PF03401	TctC	6.02
PF07690	MFS_1	2.26
PF03928	HbpS-like	1.50
PF03734	YkuD	1.50
PF00083	Sugar_tr	0.75
PF07883	Cupin_2	0.75
PF13649	Methyltransf_25	0.75
PF05036	SPOR	0.75
PF04909	Amidohydro_2	0.75
PF00313	CSD	0.75
PF13414	TPR_11	0.75
PF01471	PG_binding_1	0.75
PF00211	Guanylate_cyc	0.75
PF01315	Ald_Xan_dh_C	0.75
PF00665	rve	0.75
PF13701	DDE_Tnp_1_4	0.75
PF00440	TetR_N	0.75
PF13432	TPR_16	0.75
PF00149	Metallophos	0.75
PF02627	CMD	0.75
PF00497	SBP_bac_3	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	27.82
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	6.02
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.50
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.50
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.75
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.75
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.75
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.75
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.75
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.75
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.97 %
Unclassified	root	N/A	12.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.97 %
Unclassified	root	N/A	12.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.97 %
Unclassified	root	N/A	12.03 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.41 %
Unclassified	root	N/A	12.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.41 %
Unclassified	root	N/A	12.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	26.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.53 %
Unclassified	root	N/A	12.03 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	2.26 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	26.32 %
Unclassified	root	N/A	12.03 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.02 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	2.26 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.75 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.75 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	26.32 %
Unclassified	root	N/A	12.03 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.02 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2.26 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	0.75 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	26.32 %
Unclassified	root	N/A	12.03 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	2.26 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.75 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.75 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.75 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	26.32 %
Unclassified	root	N/A	12.03 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2.26 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.75 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.75 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.75 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	26.32 %
Unclassified	root	N/A	12.03 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2.26 %
Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp.	0.75 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.75 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.75 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0636434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2035	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1074812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1018185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp.	1333	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1069800	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300005093\|Ga0062594_100780088	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300005174\|Ga0066680_10321666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	987	Open in IMG/M
3300005187\|Ga0066675_10079162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2115	Open in IMG/M
3300005332\|Ga0066388_108374831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	515	Open in IMG/M
3300005363\|Ga0008090_10086504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300005556\|Ga0066707_10036306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2771	Open in IMG/M
3300005559\|Ga0066700_10642063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300005713\|Ga0066905_100290279	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005713\|Ga0066905_100293180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1273	Open in IMG/M
3300005713\|Ga0066905_101631795	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005713\|Ga0066905_102170224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	517	Open in IMG/M
3300005764\|Ga0066903_103252122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300005764\|Ga0066903_104631608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300005764\|Ga0066903_108286880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300006173\|Ga0070716_101081240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300006844\|Ga0075428_100937314	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300006846\|Ga0075430_100663413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	860	Open in IMG/M
3300007788\|Ga0099795_10271569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300009147\|Ga0114129_11659728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300009156\|Ga0111538_11469647	Not Available	859	Open in IMG/M
3300009792\|Ga0126374_10265385	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300009792\|Ga0126374_11775223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300010043\|Ga0126380_11836661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300010046\|Ga0126384_10677059	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300010046\|Ga0126384_11471048	Not Available	637	Open in IMG/M
3300010048\|Ga0126373_11194258	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300010048\|Ga0126373_11679865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300010301\|Ga0134070_10285163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300010335\|Ga0134063_10011202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3519	Open in IMG/M
3300010339\|Ga0074046_10601589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300010359\|Ga0126376_11223772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300010360\|Ga0126372_12811937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300010361\|Ga0126378_10427417	Not Available	1438	Open in IMG/M
3300010361\|Ga0126378_12916813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300010366\|Ga0126379_11453344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300010376\|Ga0126381_102208368	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300010396\|Ga0134126_12411770	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300010398\|Ga0126383_12927234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300012208\|Ga0137376_11510662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300012212\|Ga0150985_110209596	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300012359\|Ga0137385_10161551	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300012930\|Ga0137407_12207890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300012972\|Ga0134077_10414002	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300012988\|Ga0164306_10748977	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300015373\|Ga0132257_101703865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300016294\|Ga0182041_11239287	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300016319\|Ga0182033_10937283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300016341\|Ga0182035_10475272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1064	Open in IMG/M
3300016341\|Ga0182035_11552415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300016371\|Ga0182034_11566570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300016387\|Ga0182040_10713550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	821	Open in IMG/M
3300016445\|Ga0182038_11360252	Not Available	635	Open in IMG/M
3300018431\|Ga0066655_10754459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300018468\|Ga0066662_10370268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1243	Open in IMG/M
3300020579\|Ga0210407_10217728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1485	Open in IMG/M
3300021444\|Ga0213878_10175365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	896	Open in IMG/M
3300022756\|Ga0222622_10856169	All Organisms → cellular organisms → Bacteria → Nitrospirae	665	Open in IMG/M
3300026277\|Ga0209350_1143496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300026316\|Ga0209155_1198999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300026330\|Ga0209473_1200726	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300026547\|Ga0209156_10228652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	875	Open in IMG/M
3300026547\|Ga0209156_10354156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300026816\|Ga0207509_109388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300027371\|Ga0209418_1037894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	847	Open in IMG/M
3300027846\|Ga0209180_10277031	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300031544\|Ga0318534_10036673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2705	Open in IMG/M
3300031545\|Ga0318541_10241838	Not Available	1002	Open in IMG/M
3300031545\|Ga0318541_10258359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	968	Open in IMG/M
3300031545\|Ga0318541_10431163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	737	Open in IMG/M
3300031546\|Ga0318538_10424660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300031546\|Ga0318538_10474990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300031573\|Ga0310915_10071195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2291	Open in IMG/M
3300031573\|Ga0310915_11215602	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300031573\|Ga0310915_11238361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300031679\|Ga0318561_10670213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300031679\|Ga0318561_10764169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	531	Open in IMG/M
3300031681\|Ga0318572_10179919	Not Available	1230	Open in IMG/M
3300031713\|Ga0318496_10381669	Not Available	779	Open in IMG/M
3300031724\|Ga0318500_10260401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300031736\|Ga0318501_10434813	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300031736\|Ga0318501_10535901	Not Available	640	Open in IMG/M
3300031740\|Ga0307468_100465162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	990	Open in IMG/M
3300031744\|Ga0306918_10494260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	957	Open in IMG/M
3300031747\|Ga0318502_10106948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1557	Open in IMG/M
3300031768\|Ga0318509_10374926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	796	Open in IMG/M
3300031777\|Ga0318543_10217495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300031778\|Ga0318498_10215651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	869	Open in IMG/M
3300031778\|Ga0318498_10391943	Not Available	618	Open in IMG/M
3300031781\|Ga0318547_10290527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	991	Open in IMG/M
3300031793\|Ga0318548_10147458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1146	Open in IMG/M
3300031794\|Ga0318503_10228792	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300031796\|Ga0318576_10497014	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031797\|Ga0318550_10430549	Not Available	638	Open in IMG/M
3300031798\|Ga0318523_10691921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300031833\|Ga0310917_11016610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300031845\|Ga0318511_10320614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300031879\|Ga0306919_10828471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300031879\|Ga0306919_11451275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300031890\|Ga0306925_10917976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300031890\|Ga0306925_11357432	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300031893\|Ga0318536_10373996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	721	Open in IMG/M
3300031897\|Ga0318520_10312413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300031910\|Ga0306923_10398501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1566	Open in IMG/M
3300031910\|Ga0306923_11033018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300031941\|Ga0310912_10048932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2962	Open in IMG/M
3300031942\|Ga0310916_11562825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	536	Open in IMG/M
3300031945\|Ga0310913_10171982	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300031945\|Ga0310913_10668125	Not Available	735	Open in IMG/M
3300031946\|Ga0310910_10519321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	945	Open in IMG/M
3300031947\|Ga0310909_10336948	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300031954\|Ga0306926_11106542	Not Available	936	Open in IMG/M
3300031954\|Ga0306926_11247065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300031954\|Ga0306926_11905811	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031954\|Ga0306926_12361180	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031981\|Ga0318531_10247294	Not Available	805	Open in IMG/M
3300032035\|Ga0310911_10473336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300032039\|Ga0318559_10029948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2167	Open in IMG/M
3300032054\|Ga0318570_10189307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	928	Open in IMG/M
3300032059\|Ga0318533_10366838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1049	Open in IMG/M
3300032063\|Ga0318504_10054468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1691	Open in IMG/M
3300032063\|Ga0318504_10354389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300032065\|Ga0318513_10648827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300032076\|Ga0306924_10277835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1923	Open in IMG/M
3300032089\|Ga0318525_10331242	Not Available	782	Open in IMG/M
3300032261\|Ga0306920_100567767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1680	Open in IMG/M
3300032261\|Ga0306920_102380909	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300032261\|Ga0306920_103532174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300033289\|Ga0310914_10767970	Not Available	861	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.74%
Host-Associated	Host-Associated	4.51%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.98%
Plants	Host-Associated → Plants	4.51%
Aquatic	Environmental → Aquatic	0.75%
Solid Waste	Engineered → Solid Waste	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.50%
Sediment	Environmental → Aquatic → Sediment	0.75%
Grass	Engineered → Solid Waste → Grass	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.21%
Loam	Environmental → Terrestrial → Soil → Loam	9.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.01%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026816	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-B (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060267

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_06364341	3300000156	Sugar Cane Bagasse Incubating Bioreactor	IHKPTTATFSFEIGHATFKSINWGRADEQLSSGLHYRKDDIIRVAQQLLSKLPGRRNEVIE*
AF_2010_repII_A01DRAFT_10748122	3300000580	Forest Soil	HKPTAAXFSFETGQTTFKSIDWGRADEQLSSGQAYRKDDIVRVAQQLLNKLPR*
AF_2010_repII_A100DRAFT_10181851	3300000655	Forest Soil	TGDSTFKSVDWGRADEQAGSDYRRDDIMRVAQQLLSKLPR*
AP72_2010_repI_A001DRAFT_10698001	3300000893	Forest Soil	TFSFETGQTTFKSIDWGRADEQRSSGLDYRKDDIMRVAQQLLSKLPR*
Ga0062594_1007800882	3300005093	Soil	HKPTTATFSFDTGHTTFTSINWGRADEQLTSGLDYRKDDIIRVAQQLLSKLPR*
Ga0066680_103216663	3300005174	Soil	FSFETGRTTFKSVNWGRADEQPSSGLVYRKDDIMRVAQQLLSKLPR*
Ga0066675_100791625	3300005187	Soil	HKPTRATFSFETGHTTFKSINWGGAEEQLSSGLDYRKDDIIRVAQQLLSKLPR*
Ga0066388_1083748311	3300005332	Tropical Forest Soil	HTTFKSVDWGHAGEQPSSGPDYRKDDIMRVAQQLLSKLPR*
Ga0066388_1088189832	3300005332	Tropical Forest Soil	IGHTTFKSVNWGRADEQLSSGLHYRKDDIIRVAQQLLSKLQGKGAT*
Ga0008090_100865042	3300005363	Tropical Rainforest Soil	MIHKPTTATFSFETGHTTFKSINWGRADEQLSSGPNYRKDDIIRVAQQLLSKLPNKGAT*
Ga0066707_100363061	3300005556	Soil	TFKSIDWGRADEQRSSGLDYRKDDIVRVAQQLLMKLPR*
Ga0066700_106420632	3300005559	Soil	ATFSFDTGDTTFKSIDWGRADEQRSSGLDYRKDDIVRVAQQLLMKLPR*
Ga0066905_1002902793	3300005713	Tropical Forest Soil	INWGRADEQLSSGLNYRKDDIIRVAQRLLSKLPR*
Ga0066905_1002931803	3300005713	Tropical Forest Soil	PTTATFSFETNHTTFKSINWGRADEQLSSGLNYRKDDIIRLAQQLLSKLPR*
Ga0066905_1016317951	3300005713	Tropical Forest Soil	IVHKPTAAIFSFDTGDTAFKSVDWGRAGEQASGSDYRRDDIMRVAQQLLSKLPR*
Ga0066905_1021702241	3300005713	Tropical Forest Soil	GQTTFKSIDWGRADEQRSSGLDYRKDDIMRVAQQLLSKLPR*
Ga0066903_1032521221	3300005764	Tropical Forest Soil	TTFKSINWGRADEQLSSGLNYRKDDIIRVAQQLLSKLPR*
Ga0066903_1046316081	3300005764	Tropical Forest Soil	HTTFKSINWGRADEQLSSGLAYRKDDIIRVAQQLLSKLPR*
Ga0066903_1082868802	3300005764	Tropical Forest Soil	TTFKSINWGGAHEQLSSGLDYRKDDIIRVAQQLLSKLPR*
Ga0070716_1010812402	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SIDWGRADEQLSSGLDYRKDDILRVAQQLLSKLPR*
Ga0075428_1009373141	3300006844	Populus Rhizosphere	KMVHKPTAATLNFDPGQTAFKSVDWGRAGEQPDSGYRKDDIMRVAQQLLSKLPR*
Ga0075430_1006634131	3300006846	Populus Rhizosphere	NKIVHKPTKATFSFDPGHTAFKSVDWGRAGELSTGQDYRKDDVMRVAQQLLSKLPR*
Ga0099795_102715691	3300007788	Vadose Zone Soil	TFKSIDWGRVDEQRSSGLDYRKDDIVRVAQQLLSKLPR*
Ga0114129_116597281	3300009147	Populus Rhizosphere	TFKSINWGFADGQLSSGLDYRKDDIIRLAQQLLSKLPR*
Ga0111538_114696471	3300009156	Populus Rhizosphere	KIVHKPTKATFSFDTGHTSFKNVDWGRAGEPLSTGQDYRKDDVMRVAQQLLSKLPR*
Ga0126374_102653852	3300009792	Tropical Forest Soil	PTTATLNFETGDTTFKSISWGRADEQLPSGLDYRKDDIIRVAQQLLSKLPR*
Ga0126374_117752231	3300009792	Tropical Forest Soil	IIHKPTTATFSFETGQTTFKSISWGRADEQRSSGLDYRKDDIMRVAQQLLSKLPR*
Ga0126380_118366613	3300010043	Tropical Forest Soil	TRATFSFETGHTTFKSINWGGAEEQPSSGLDYRKDDIIRVAQQLLSKLPR*
Ga0126384_106770591	3300010046	Tropical Forest Soil	AIFSFDTGDTAFKSVDWGRAGEQASGSDYRRDDIMRVAQQLLSKLPR*
Ga0126384_114710482	3300010046	Tropical Forest Soil	VNWGRVGEQLSTGPDYRKDDVMRVAQQLLSKLPR*
Ga0126373_111942584	3300010048	Tropical Forest Soil	GHTTFKSINWGRADEQLSSGLDFRKDDIMRVAQQLLSKLPR*
Ga0126373_116798651	3300010048	Tropical Forest Soil	TFKTIDWGRADEQLSAGTEYRRDDIVRVAQQLLMKLPR*
Ga0134070_102851631	3300010301	Grasslands Soil	KPTRATFSFETGHTTFKSINWGGAEEQLSSGLDYRKDDIIRVAQQLLSKLPR*
Ga0134063_100112024	3300010335	Grasslands Soil	FKSIDWGRADEQRSSGLDYRKDDIVRVAQQLLMKLPR*
Ga0074046_106015891	3300010339	Bog Forest Soil	KPTQATFNFDTGRTAFKSVDWGRAGEQSSTGQDYRQDDVMRVAQRLLSKLPR*
Ga0126376_112237721	3300010359	Tropical Forest Soil	TATFRFETGHTTFKSINWGRADEQLSSGLNYRKDDIIRVAQQLLSKLPR*
Ga0126372_128119371	3300010360	Tropical Forest Soil	QTTFKSIDWGRADEQRSSGLDYRKDDIMRVAQQLLSKLPR*
Ga0126378_104274173	3300010361	Tropical Forest Soil	TTATFNFETGQTTFKSISWGRADEQRSSGLDYRKDDIMRVAQQLLSKLPR*
Ga0126378_129168132	3300010361	Tropical Forest Soil	IIHKPTTATFSFEIGHTTFKSVNWGRADEQLSSGLHYRKDDIIRVAQQLLSKLPR*
Ga0126379_114533441	3300010366	Tropical Forest Soil	RIIHKPTTAIFSFETGHTTFKSVDWGRAGEQPSSGPDYRKDDIMRVAQQLLSKLPR*
Ga0126381_1022083681	3300010376	Tropical Forest Soil	RIIHKPTTATFSFETGHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLGKLPR*
Ga0134126_124117701	3300010396	Terrestrial Soil	HTTFKSINWGGADEQLSSGLDYRKDDIIRVAQQLLSKLPR*
Ga0126383_129272341	3300010398	Tropical Forest Soil	SFETGHTTFKSISWGGADERLLSGSNYRKDDIIRVAQQLLNKLPR*
Ga0137376_115106621	3300012208	Vadose Zone Soil	MPRFIHKPTTATFSFETGHTTFKSINWGRADEQLSSGLHYRKDDIIRVAQQLL
Ga0150985_1102095961	3300012212	Avena Fatua Rhizosphere	MRATFSFETGHTTFKSINWGGADEKLSSGLDYRKDDIIRVAQQLLRKLPR*
Ga0137385_101615511	3300012359	Vadose Zone Soil	TFSFDTGDTTFKSIDWGRADEQPSSGLDYRKDDIVRVAQQLLMKLPR*
Ga0137407_122078901	3300012930	Vadose Zone Soil	IIHKPTRATFSFETGHTAFKSINWGGAEEQLSSGLDYRKDDIIRVAQQLLSKLPR*
Ga0134077_104140021	3300012972	Grasslands Soil	DTTFKSVDWGRAGEQQSSGPDYRKDDIMRVAQQLLTKLPR*
Ga0164306_107489772	3300012988	Soil	TAATFNFETGHTTFKSINWGRADEQPSSGLDYRKDDIMRVAQQLLSKLPR*
Ga0132257_1017038651	3300015373	Arabidopsis Rhizosphere	AGDTTFKSIDWGRADEKLSSGTEYRRDDIIRVAQQLLMKLPR*
Ga0182041_112392871	3300016294	Soil	SFETGHTTFKSINWGRADEQLSSDLAYRKDDIIRVAQQLLSKLPR
Ga0182033_109372831	3300016319	Soil	HKPTTAIFRFETGHTTFKSVDWGRAGEQPPSGLDYRKDDIMRVAQQLLSKLPR
Ga0182035_104752721	3300016341	Soil	PTTATFSFETGHTTFKSINWGRADEQLSSDLAYRKDDIIRVAQQLLSKLPR
Ga0182035_115524151	3300016341	Soil	SVDWGRAGEQPSSGPDYRKDDIMRVAQQLLSKLPR
Ga0182034_115665702	3300016371	Soil	HKPTRATFNFETGHTSFKSINWGGADEQRSSGLDYRKDDIIRVAQQLLSKLPR
Ga0182040_107135502	3300016387	Soil	GHTTFKSINWGRADEQLSSGLDFGKDDIMRVAQQLLSKLPR
Ga0182038_113602521	3300016445	Soil	FSFETGHTTFKSINWGRADEQLSSDLAYRKDDIIRVAQQLLSKLPR
Ga0066655_107544591	3300018431	Grasslands Soil	ATFSFDVGRTTFNSIHWGGAGEQLSSGITYRKDDVMRVAQQLLTKLPK
Ga0066662_103702681	3300018468	Grasslands Soil	TFKSINWGGAEEQLSSGLDYRKDDIIRVAQQLLSKLPR
Ga0210407_102177283	3300020579	Soil	IIHKPTAATFNFETGHTTFKSIDWGRADEQVSSGLDYRKDDIMRVAQQLLSKLPR
Ga0213878_101753651	3300021444	Bulk Soil	AFKSIDWGGAEEQRSSALDYRKDDIIRVAQQLLSKLPR
Ga0222622_108561691	3300022756	Groundwater Sediment	LNPRIIHKPTNATFSFDLGDTVFKSINWARAGEQLKPGQNYHKDNVMRVAQQLLSKLPT
Ga0209350_11434961	3300026277	Grasslands Soil	SINWGGAEEQLSSGLDYRKDDIIRVAQQLLSKLPR
Ga0209155_11989991	3300026316	Soil	RIIHKPTTATFNFETGQTTFKSIDWGSADEQLSSGQDYRKEDIARVAQQLLSKLPR
Ga0209473_12007262	3300026330	Soil	FSFETGHTTFKSIDWGRVDEQLSSGLDYRKDDVLRVAQQLLSKLPR
Ga0209156_102286523	3300026547	Soil	QTTFKSIDWGSADEQLSSGQDYRKEDIARVAQQLLSKLPR
Ga0209156_103541562	3300026547	Soil	DTTFKSIDWGRVDEQRSSGLDYRKDDIVRVAQQLLMKLPR
Ga0207509_1093881	3300026816	Soil	NRIVHKPTAATFSFDTNHTTFKSINWGHADEHLSSGTAYRKDDIIRVAQQLLGKLPG
Ga0209418_10378941	3300027371	Forest Soil	KPTKATFSFETGHTTFKSINWGGADEQRSSGLDYRKDDIVRVAQQLLSKLPR
Ga0209180_102770312	3300027846	Vadose Zone Soil	NKIIHKPTRATFSFETGRTTFKSINWGGADEQLSSGLDYRKDDIVRVAQQLLSKLPR
Ga0318534_100366731	3300031544	Soil	FKSINWGRADEQLSSSLDYRKDDIIRVAQQLLSKLPR
Ga0318541_102418381	3300031545	Soil	ATFLFDPGHTDFRSVNWERAGEQRLSSPDYRKDDIMRVAQQLLGKLPR
Ga0318541_102583591	3300031545	Soil	IIHKPTTATFSFETGHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLTKLPRQGAI
Ga0318541_104311632	3300031545	Soil	HTTFKSINWGRADEQLSSDLAYRKDDIIRVAQQLLSKLPR
Ga0318538_104246602	3300031546	Soil	HTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLTKLPRQGAI
Ga0318538_104749902	3300031546	Soil	FKSVDWGRAGEQPSSGPDYRKDDIMRVAQQLLSKLPR
Ga0310915_100711953	3300031573	Soil	FDTGDTMFKSVDWGRADEQAGSDYRRDDIMRVAQQLLSKLPR
Ga0310915_112156022	3300031573	Soil	HTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLSKLPR
Ga0310915_112383612	3300031573	Soil	HKPTTATFNFDTGDTAFKSIDWGHADEQPSSGTAYRRDDIIRVAEQLLRKLPR
Ga0318561_106702131	3300031679	Soil	TATFSFETGHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLGKLPR
Ga0318561_107641693	3300031679	Soil	RIIHKPTTATFSFETGHTTFKSINWGRADEQLSSGLDYRKDDIIRVAQQLLSKLPR
Ga0318572_101799194	3300031681	Soil	ATFSFETGHTAFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLSKLPR
Ga0318496_103816692	3300031713	Soil	RIIHKPTTATFSFETGQTTFKSIDWGRADKQLSSGLDYRKDDIMRVAQQLLSKLPR
Ga0318500_102604011	3300031724	Soil	FSFETGHTTFKSVDWGRAGEQPPSGLDYRKDDIMRVAQQLLSKLPR
Ga0318501_104348132	3300031736	Soil	IVHKPTAAIFSFDTGDTMFKSVDWGRADEQAGSDYRRDDIMRVAQQLLSKLPR
Ga0318501_105359011	3300031736	Soil	GHTTFTSIWGRADEQLPSGLDYRKDDIIRVAQQLLSKLPR
Ga0307468_1004651621	3300031740	Hardwood Forest Soil	KSINWGGADEQLSSGLDYRKDDIIRVAQQLLSKLPR
Ga0306918_104942602	3300031744	Soil	KPTTATFSFETGHTTFKSINWGRADEQLSSDLAYRKDDIIRVAQQLLSKLPR
Ga0318502_101069481	3300031747	Soil	PTTATFSFETGQTTFKSIDWGRADKQLSSGLDYRKDDIMRVAQQLLSKLPR
Ga0318509_103749262	3300031768	Soil	NRIIHKPTTATFSFETGHTTFKSINWGRADEQLSSDLAYRKDDIIRVAQQLLSKLPR
Ga0318543_102174951	3300031777	Soil	FKSVVWGRAGEQPSSGPDYRKDDIMRVAQQLLSKLPR
Ga0318498_102156511	3300031778	Soil	RIIHKPTTATFSFEIGHTTFKSVNWGRADEQLSSGLHYRKDDIIRVAQQLLSKLPR
Ga0318498_103919431	3300031778	Soil	FSFETGQTTFKSIDWGRADKQLSSGLDYRKDDIMRVAQQLLSKLPR
Ga0318547_102905271	3300031781	Soil	KPTTATFSFETGHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLGKLPR
Ga0318548_101474581	3300031793	Soil	TFKSINWGRADEQLSSGLAYRKDDIIRVAQQLLSKLPR
Ga0318503_102287922	3300031794	Soil	QIIHKPTGATFLFDPGHTDFRSVNWERAGEQRLSSPDYRKDDIMRVAQQLLGKLPR
Ga0318576_104970142	3300031796	Soil	TFKSINWGRADEQLSSGLHYRKDDIIRVAQQLLSKLPR
Ga0318550_104305492	3300031797	Soil	FQAGSAAFKSVDWGHVDEQSSTGQQYRKEDLMRVAQQLLAKLPK
Ga0318523_106919212	3300031798	Soil	HKPTTAIFSFETGHTTFKSVDWGRAGEQPSSGPDYRKDDIMRVAQQLLSKLPR
Ga0310917_110166102	3300031833	Soil	FETGHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLSKLPR
Ga0318511_103206142	3300031845	Soil	FKSINWGRADEQLSSGLHYRKDDIIRVAQQLLSKLPR
Ga0306919_108284712	3300031879	Soil	PTTAVFSFETGHTTFKSVDWGRAGEQPSSGLDYRKDDIMRVAQQLLSKLPR
Ga0306919_114512751	3300031879	Soil	TTATFSFETGHTTFKSINWGRADEQLSSGLDYRKDDIIRVAQQLLSKLPR
Ga0306925_109179761	3300031890	Soil	FKSINWGRADEQLPSGLDYRKDDIIRVAQQLLTKLPRQGAI
Ga0306925_113574322	3300031890	Soil	TATFSFETGHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLSKLPR
Ga0318536_103739961	3300031893	Soil	FETGHTTFKSINWGRADEQLSSGLAYRKDDIIRVTQQLLSKLPR
Ga0318520_103124132	3300031897	Soil	TGHTTFKSVDWGRAGEQSSSGPDYRKDDIMRVAQQLLSKLPR
Ga0306923_103985013	3300031910	Soil	ETGQTTFKSINWEGADEQRSSGLDYRKDDIIRVAQQLLSKLPR
Ga0306923_110330182	3300031910	Soil	HTTFKSVDWGRAGEQSSSGPDYRKDDIMRVAQQLLSKLPR
Ga0310912_100489321	3300031941	Soil	PTTAIFSFETGHTTFKSVDWGRAGEQPPSGLDYRKDDIMRVAQQLLSKLPR
Ga0310916_115628253	3300031942	Soil	HKPTTATFSFETGHTTFKSINWGRADEQLSSGLDYRKDDIIRVAQQLLSKLPR
Ga0310913_101719823	3300031945	Soil	FETGHTTFKSINWGGAEEQRSSGLDYRKDDVMRVAQQLLSKLPR
Ga0310913_106681251	3300031945	Soil	VETGHTTFKSINWGRADEQLSSGLAYRKDDIIRVAQQLLSKLPR
Ga0310910_105193212	3300031946	Soil	LSAAGVKFDGAPPTTATFSFETGHTTFKSINWGRADEQLSSGLDYRKDDIIRVAQQLLSKLPR
Ga0310909_103369483	3300031947	Soil	ATFSFETGHTTFKSINWGGAEEQRSSGLDYRKDDVMRVAQQLLSKLPR
Ga0306926_111065422	3300031954	Soil	TATFSFETGHTTFKSINWGRADEQLSSGLAYRKDDIIRVTQQLLSKLPR
Ga0306926_112470651	3300031954	Soil	HKPTAATFNFDAGDTTFKSINWGRADEQPSSDTAYRRDDILRVAQLLLRKLPK
Ga0306926_119058111	3300031954	Soil	GHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLSKLPR
Ga0306926_123611801	3300031954	Soil	HGTFKSINWGRADEKLPSGLDYRKDDIIRVAQHLLSKLPR
Ga0318531_102472942	3300031981	Soil	AGHTTFKSINWGRADEQLSSGLAYRKDDIIRVAQQLLSKLPR
Ga0310911_104733361	3300032035	Soil	NRIIHKPTTATFSFETGHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLSKLPR
Ga0318559_100299481	3300032039	Soil	TFKSVNWGRADEQLSSGLHYRKDDIIRVAQQLLSKLPR
Ga0318570_101893072	3300032054	Soil	FKSINWGRADEQLSSGLDYRKDDIIRVAQQLLSKLPR
Ga0318533_103668381	3300032059	Soil	TFKSVDWGRAGEQPSSGPDYRKDDIMRVAQQLLSKLPR
Ga0318504_100544681	3300032063	Soil	FKSIHWGRADKQLSSGLDYRKDDIMRVAQQLLSKLPR
Ga0318504_103543891	3300032063	Soil	KPTTATFSFETGHTTFKSINWGRADEQLSSGLDYRKDDIIRVAQQLLSKLPR
Ga0318513_106488271	3300032065	Soil	IIHKPTTAIFSFETGHTTFKSVDWGRAGEQPPSGLDYRKDDIMRVAQQLLSKLPR
Ga0306924_102778351	3300032076	Soil	TATFSFETGHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLTKLPRQGAI
Ga0318525_103312422	3300032089	Soil	IIHKPTTATFSFETGQTTFKSIDWGRADKQLSSGLDYRKDDIMRVAQQLLSKLPR
Ga0306920_1005677674	3300032261	Soil	FETGHTTFKSINWGRADEQLPSGLDYRKDDIIRVAQQLLTKLPRQGAI
Ga0306920_1023809091	3300032261	Soil	TATFSFETGHTTFKSINCGRADEQLSSGLDYRKDDIMRVAQQLLSKLPR
Ga0306920_1035321742	3300032261	Soil	HKPTRATFSFDTGHTTFKSINWGHADEELSSGTTYRKDDISRVAQELLSKLPR
Ga0310914_107679701	3300033289	Soil	IIHKPTTATFSFEAGHTTFKSINWGRADEQLSSGLDYRKDDIIRVAQQLLSKGAT

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign