Metagenome / Metatranscriptome Family F060236

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060236
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	45 residues
Representative Sequence	EIGFPGDIQPRGYSATEVERSDGHDPVDSTGIVADVLKLLGAL
Number of Associated Samples	123
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.23 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.496 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.293 % of family members)
Environment Ontology (ENVO)	Unclassified (24.812 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.632 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.21% β-sheet: 0.00% Coil/Unstructured: 64.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF13450	NAD_binding_8	77.44
PF00890	FAD_binding_2	18.05
PF05199	GMC_oxred_C	1.50
PF07690	MFS_1	0.75
PF05977	MFS_3	0.75
PF03486	HI0933_like	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	1.50
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.50
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.50
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	0.75
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	0.75
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.75
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	0.75
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	0.75
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.75
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	0.75
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	0.75
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.75
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	97.74 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	97.74 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	90.23 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	8.27 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	7.52 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	7.52 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	5.26 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Mycobacterium sp. UM_CSW	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	5.26 %
Unclassified	root	N/A	1.50 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_4424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300001593\|JGI12635J15846_10186995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1383	Open in IMG/M
3300001976\|JGI24752J21851_1045586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300004092\|Ga0062389_102036540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300005327\|Ga0070658_10162241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1875	Open in IMG/M
3300005339\|Ga0070660_100395867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1141	Open in IMG/M
3300005367\|Ga0070667_100177134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1885	Open in IMG/M
3300005434\|Ga0070709_11466260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	553	Open in IMG/M
3300005435\|Ga0070714_102173619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300005467\|Ga0070706_100338249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1403	Open in IMG/M
3300005530\|Ga0070679_100176238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2111	Open in IMG/M
3300005533\|Ga0070734_10253599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1009	Open in IMG/M
3300005536\|Ga0070697_100728771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	875	Open in IMG/M
3300005541\|Ga0070733_11119894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	528	Open in IMG/M
3300005553\|Ga0066695_10689940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300005555\|Ga0066692_10964160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300005556\|Ga0066707_10685315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	644	Open in IMG/M
3300005558\|Ga0066698_10812266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300005575\|Ga0066702_10366090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300005602\|Ga0070762_11229917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300005610\|Ga0070763_10994587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	502	Open in IMG/M
3300005617\|Ga0068859_102692603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	546	Open in IMG/M
3300006174\|Ga0075014_100646670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	609	Open in IMG/M
3300006175\|Ga0070712_101077596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300006606\|Ga0074062_13026655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300006796\|Ga0066665_11529839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	522	Open in IMG/M
3300006871\|Ga0075434_101200840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300006893\|Ga0073928_11155880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	523	Open in IMG/M
3300009012\|Ga0066710_104506595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300009089\|Ga0099828_10122590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2272	Open in IMG/M
3300009824\|Ga0116219_10492449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300010046\|Ga0126384_10443754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1106	Open in IMG/M
3300010335\|Ga0134063_10365644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300010358\|Ga0126370_10167728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1621	Open in IMG/M
3300010358\|Ga0126370_11605816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300010359\|Ga0126376_11489766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300010360\|Ga0126372_10517573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1125	Open in IMG/M
3300010376\|Ga0126381_101104839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1145	Open in IMG/M
3300010379\|Ga0136449_103582997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300010876\|Ga0126361_10641917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300012199\|Ga0137383_11013676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300012349\|Ga0137387_10443669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	941	Open in IMG/M
3300012500\|Ga0157314_1005891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	944	Open in IMG/M
3300012915\|Ga0157302_10132690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826	Open in IMG/M
3300012944\|Ga0137410_11670310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300012951\|Ga0164300_11208169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300012988\|Ga0164306_10134782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1663	Open in IMG/M
3300013105\|Ga0157369_11304389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	740	Open in IMG/M
3300013306\|Ga0163162_11425600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300014657\|Ga0181522_10140636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1408	Open in IMG/M
3300015372\|Ga0132256_102175937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300015373\|Ga0132257_104111126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300016270\|Ga0182036_11853459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300016294\|Ga0182041_10240285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1468	Open in IMG/M
3300016422\|Ga0182039_12235880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300017924\|Ga0187820_1119098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	773	Open in IMG/M
3300017926\|Ga0187807_1297999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300017955\|Ga0187817_10556647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300017970\|Ga0187783_11166525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300017972\|Ga0187781_11498660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300017973\|Ga0187780_10594498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	794	Open in IMG/M
3300017994\|Ga0187822_10148264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	752	Open in IMG/M
3300018431\|Ga0066655_10826550	Not Available	630	Open in IMG/M
3300020580\|Ga0210403_10233091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1511	Open in IMG/M
3300021168\|Ga0210406_10393733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1111	Open in IMG/M
3300021374\|Ga0213881_10078281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1417	Open in IMG/M
3300021404\|Ga0210389_11429596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300021406\|Ga0210386_10547598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300021407\|Ga0210383_11125387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300021420\|Ga0210394_10840152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801	Open in IMG/M
3300021478\|Ga0210402_11067657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300021479\|Ga0210410_10485305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1104	Open in IMG/M
3300021560\|Ga0126371_10168349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2266	Open in IMG/M
3300021560\|Ga0126371_10977403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	989	Open in IMG/M
3300021560\|Ga0126371_12473554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300021560\|Ga0126371_12482971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300021560\|Ga0126371_12619723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300024283\|Ga0247670_1061396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300025735\|Ga0207713_1158554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300025900\|Ga0207710_10736432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300026095\|Ga0207676_10540944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1111	Open in IMG/M
3300026142\|Ga0207698_10619021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1069	Open in IMG/M
3300026538\|Ga0209056_10391731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	866	Open in IMG/M
3300026551\|Ga0209648_10367927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	974	Open in IMG/M
3300027030\|Ga0208240_1037975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300027110\|Ga0208488_1087183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300027307\|Ga0209327_1015412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300027502\|Ga0209622_1017386	Not Available	1246	Open in IMG/M
3300027725\|Ga0209178_1146584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813	Open in IMG/M
3300027826\|Ga0209060_10477877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300027853\|Ga0209274_10528095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300027855\|Ga0209693_10138487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1203	Open in IMG/M
3300027855\|Ga0209693_10536398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300027869\|Ga0209579_10341807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	809	Open in IMG/M
3300027908\|Ga0209006_10665114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	855	Open in IMG/M
3300027915\|Ga0209069_10382652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300028799\|Ga0307284_10431031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300028877\|Ga0302235_10194903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	894	Open in IMG/M
3300030053\|Ga0302177_10194928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300030520\|Ga0311372_12962656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300030580\|Ga0311355_10583845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1057	Open in IMG/M
3300030693\|Ga0302313_10334181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300031681\|Ga0318572_10080562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1808	Open in IMG/M
3300031682\|Ga0318560_10261501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	930	Open in IMG/M
3300031715\|Ga0307476_10574815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300031718\|Ga0307474_11650602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300031744\|Ga0306918_10239283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1382	Open in IMG/M
3300031744\|Ga0306918_11577223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300031754\|Ga0307475_10369566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1152	Open in IMG/M
3300031763\|Ga0318537_10291761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300031782\|Ga0318552_10029915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2490	Open in IMG/M
3300031794\|Ga0318503_10017913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1964	Open in IMG/M
3300031797\|Ga0318550_10037789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2114	Open in IMG/M
3300031820\|Ga0307473_11119141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300031845\|Ga0318511_10237121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300031894\|Ga0318522_10099867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1074	Open in IMG/M
3300031910\|Ga0306923_10734854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1096	Open in IMG/M
3300031912\|Ga0306921_10054018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4570	Open in IMG/M
3300031945\|Ga0310913_10364930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1023	Open in IMG/M
3300031945\|Ga0310913_10798054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300031954\|Ga0306926_11103008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	938	Open in IMG/M
3300032001\|Ga0306922_10990290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	868	Open in IMG/M
3300032043\|Ga0318556_10567841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300032054\|Ga0318570_10115375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1183	Open in IMG/M
3300032054\|Ga0318570_10197789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	907	Open in IMG/M
3300032091\|Ga0318577_10464631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300032782\|Ga0335082_10140562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2348	Open in IMG/M
3300032805\|Ga0335078_10187783	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300032896\|Ga0335075_10096174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3900	Open in IMG/M
3300032896\|Ga0335075_11222857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300032954\|Ga0335083_10982804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300033134\|Ga0335073_12069294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300033158\|Ga0335077_10905150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	888	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.72%
Host-Associated	Host-Associated	11.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.20%
Plants	Host-Associated → Plants	11.28%
Aquatic	Environmental → Aquatic	6.77%
Unclassified	Environmental → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.26%
Freshwater	Environmental → Aquatic → Freshwater	4.51%
Peat	Environmental → Terrestrial → Peat	3.76%
Sediment	Environmental → Aquatic → Sediment	1.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.75%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.75%
Unclassified	Environmental → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.39%
Loam	Environmental → Terrestrial → Soil → Loam	12.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.50%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.75%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.01%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.50%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.51%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.01%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.01%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.75%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.75%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_00919490	2124908016		PGDVQPRGYSADEVERSDGHDPVGTGNVGTGNVGHDNTGVVADVLKLLGAL
JGI12635J15846_101869952	3300001593	Forest Soil	IGFPGDVQPQGYPADEVARSDGRDPVAATPIVTDVLKILGVV*
JGI24752J21851_10455861	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	VQPRGYSADEVERSDGHDPVGTGNVGHDNTGVVADVLKLLGAL*
Ga0062389_1020365402	3300004092	Bog Forest Soil	PGDIQPRGYTAEETSRSDGPDPVEQTPVVAEVLKFLGVV*
Ga0070658_101622412	3300005327	Corn Rhizosphere	EIGFPGDIQPRGYSADEVERSDGHDPVGTGNVGHDNTGVVADVLKLLGAL*
Ga0070660_1003958671	3300005339	Corn Rhizosphere	QPRGYSADEVERSDGHDPVSTGNVGHDNTGVVADVLKLLGAL*
Ga0070667_1001771342	3300005367	Switchgrass Rhizosphere	RGYSADEVERSDGHDPVGTGNVGTGNVGHDNTGVVADVLKLLGAL*
Ga0070709_114662601	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GNKNLAGWKEIGFPGDIQPRGYSATEVERSDGHDPVDSTGIVADVLKLLGAL*
Ga0070714_1021736192	3300005435	Agricultural Soil	WRDIGFPGDSQPLGYPAGEVERSDGRDPVAAAGVVADVLKLLGAL*
Ga0070706_1003382491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	FPGDIQPRGYTPDEVERSDGHDPVGNTGIVADVLKILGIV*
Ga0070679_1001762381	3300005530	Corn Rhizosphere	LVGWKEIGFPGDVQPRGYSADEVERSDGHDPVGTGNVGHDNTGVVADVLKLLGAL*
Ga0070734_102535991	3300005533	Surface Soil	EIGFPGDIQPRGYTADEVSRSDGHDPVDNTGIVADVLKLLGSLQ*
Ga0070697_1007287711	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NLVGWKEIGFPGDIEPRGYSAAEVERSDGHDPVDNTGIVADVIKLLGAL*
Ga0070733_111198941	3300005541	Surface Soil	GWKDISYPGDIQPRGYTAEEVSRSDGPDPLHQTPVVAEVLKFLGVV*
Ga0066695_106899402	3300005553	Soil	FPGDVQPRGYSADEVERSDGHDPVGHDNTGVVADVLKLLGAL*
Ga0066692_109641602	3300005555	Soil	YGGNRGLAGWKEIGFPGDIQPCGYSAGEVERSDGHDPVDSTGIVADVLKLLGAL*
Ga0066707_106853152	3300005556	Soil	NKNLAGWKEIGFPGDVQPRGYSATEVERSDGHDPVDSTGIVADVLKLLGAL*
Ga0066698_108122662	3300005558	Soil	GDVQPRGYSADEVERSDGHDPVASTGIVADVLKILGAL*
Ga0066702_103660902	3300005575	Soil	EIGFPGDVQPRGYSASEVERSDGHDPVDNTGIVADVIKLLGAL*
Ga0070762_112299172	3300005602	Soil	GGNRGLAGWKEIGFPGDIQPRGYTADEVSRSDGRDPVDDTGIVAEVLKLLGSL*
Ga0070763_109945871	3300005610	Soil	RGLAGWKDIGYPGDSQPLGYTSAEVERSDGRDPVGDAGIVADVLKLLGAL*
Ga0068859_1026926031	3300005617	Switchgrass Rhizosphere	NLVGWKEIGFPGDVQPRGYSADEVERSDGHDPVGTGNVGHENTGVVADVLKLLGAL*
Ga0075014_1006466701	3300006174	Watersheds	GWKDIGFPGDIQPRGFTSDEVERSDGHDPVARTGIVADVLKFLGAI*
Ga0070712_1010775962	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KEIGFPGDIQPRGYTADEVSRSDGHDPVDNTGIVAEVLKLLGSL*
Ga0074062_130266552	3300006606	Soil	EIGFPGDIQPRGYSADEVERSDGHDPVDHDNTGIVADVLKLLGAL*
Ga0066665_115298391	3300006796	Soil	KNLAGWKEIGFPGDIQPRGYSATEVERSDGHDPVDSTGIVADVLKLLGAL*
Ga0075434_1012008402	3300006871	Populus Rhizosphere	QPRGYSADEVERSDGHGPVGTGNVGHDNTGVVADVLKLLGAL*
Ga0073928_111558801	3300006893	Iron-Sulfur Acid Spring	GWKDIAFPGDIQPRGYTPDEVTRSDGHDPVDNTGVVADVLKLLGALG*
Ga0066710_1045065951	3300009012	Grasslands Soil	GDVQPRGYSADEVERSDGHDPVGNDNTGVVADVLKLLGAL
Ga0099828_101225901	3300009089	Vadose Zone Soil	GDIQPRGYTSDEVERSDGHDPVDSTGIVADVLKFLGVV*
Ga0116219_104924491	3300009824	Peatlands Soil	GWKDISFPGDIQPRGYTSDEVERSDGHDPVDDTGIVADVLKFLRAV*
Ga0126384_104437541	3300010046	Tropical Forest Soil	TGWKEIGFPGDIQPRGYSADEVERSDGHDPLGTGNASTGNTGVVADVLKLLGAL*
Ga0134063_103656441	3300010335	Grasslands Soil	GGNRKQTGWKEIGFPGDIQPRGYSADEVERSDGHDPVGHDSTGVVADVLKLLGAL*
Ga0126370_101677283	3300010358	Tropical Forest Soil	PGDVQPRGYSADEVERSDGHDPLGPGNTGVVADVLKLLGAL*
Ga0126370_116058161	3300010358	Tropical Forest Soil	NRGGSGWREIGFPGDIQPRGYTAAEVERSDGVDPVENTGIIADVIKLLGVV*
Ga0126376_114897661	3300010359	Tropical Forest Soil	IQPRGYTAGEVERSDGRDPVDDTGIVGEVLKLLGAL*
Ga0126372_105175732	3300010360	Tropical Forest Soil	VQPRGYSADEVERSDGHDPLGPGNTGVVADVLKLLGAL*
Ga0126381_1011048391	3300010376	Tropical Forest Soil	GWKEIGFPGDIQPRGYTAGEVERSDGRDPVVGSGIVADVLRLLGAL*
Ga0136449_1035829971	3300010379	Peatlands Soil	RGLAGWKDIGFPGDIQPRGYTSDEVERSDGHDPVDDTGVVADVLKLLGAV*
Ga0126361_106419172	3300010876	Boreal Forest Soil	WKDIGFPGDIQPRGYPGDEVERPDGRDPVDDTGIVADVLKLLGEL*
Ga0137383_110136761	3300012199	Vadose Zone Soil	IGFPGDVQPRGYSAGEVERSDGHDPVASTGIVADVLKILGAL*
Ga0137387_104436691	3300012349	Vadose Zone Soil	PGDVQPRGYTPDEVERSDGHDPVQNTGIVADVLKLLGAV*
Ga0157314_10058911	3300012500	Arabidopsis Rhizosphere	GWKEIGFPGDVQPRGYSADEVERSDGHDPLGRDNTGVVADVLKLLGAL*
Ga0157302_101326901	3300012915	Soil	PGYAQPRGYSADEVRRCDGHDPVGNDNTGVVADVLKLLGAL*
Ga0137410_116703101	3300012944	Vadose Zone Soil	IQPRGYSADEVERSDGHDPVGHDSTGIVADVLKLLGAL*
Ga0164300_112081691	3300012951	Soil	NLTGWEEIGFPGDVQPRGYSADEVERSDGRDPVENDNNGVVADVLKLLGAL*
Ga0164306_101347821	3300012988	Soil	EIGFPGDVQPRGYSADEVERSDGHDPVGTGNVGTGNTGVVADVLKLLGAL*
Ga0157369_113043892	3300013105	Corn Rhizosphere	GWKEIGFPGDIQPRGYTADEVERSDGPDPVENTGIIADVIKLLGVV*
Ga0163162_114256001	3300013306	Switchgrass Rhizosphere	GWKEIGFPGDVQPRGYSPDEVERSDGHDPVGTGNVGTGVVADVLKLLGAL*
Ga0181522_101406361	3300014657	Bog	GWKDISYPGDSQPRGYTAQEVMQSDGTDVLADTGVVADVLKFLKAV*
Ga0132256_1021759371	3300015372	Arabidopsis Rhizosphere	IEPRGYSADEVERSDGDDPIGHDNTGVVADVLKLLGAL*
Ga0132257_1041111262	3300015373	Arabidopsis Rhizosphere	LAGWNEIGFPGDIQPRGYSADEVERSDGHDPVGHDNTGIVADVLKLLGAL*
Ga0182036_118534591	3300016270	Soil	NRDLAGWKDIGFPGDIQPRGYTAEEVSRSDGPDPADNTGIVADVLKLLGAL
Ga0182041_102402851	3300016294	Soil	RGLAGWKEIGFPGDIQPRGYTADEVERSDGHDPVAENGIVGEVLKLLGAL
Ga0182039_122358802	3300016422	Soil	LAGWKDIGFPGDIQPRGYTAEEVSRSDGPDPVDNTGIVADVLKLLGAL
Ga0187820_11190982	3300017924	Freshwater Sediment	GDIQPRGYTAEETSRSDGPDPVDQTPVVAEVLKFLGVV
Ga0187807_12979992	3300017926	Freshwater Sediment	DSQPAGYSAVEVERSDGSDPVDDTGVVADVLKFLGAL
Ga0187817_105566472	3300017955	Freshwater Sediment	DISYPGDSQPRGYTSEEVERSEGRDPVDQTPVVADVLKFLGAV
Ga0187783_111665252	3300017970	Tropical Peatland	RGLVGWKDISYPGDSQPVGYTAEETSRSDGRDPVDETPVVAAVLKFLSVV
Ga0187781_114986601	3300017972	Tropical Peatland	NRDLAGWKDIAFPGDIQPRGYTPEEVSQSDGHDPVQATGVVGDVLKVLGALA
Ga0187780_105944981	3300017973	Tropical Peatland	LAGWKDIGFPGDIQPRGYTPDEVSRSDGPDPVQATGVVADVLKLLGAL
Ga0187822_101482641	3300017994	Freshwater Sediment	GWKDISYPGDIQPRGYSSEQVEGSDGRDQADDTPIVADVLKLLGAL
Ga0066655_108265501	3300018431	Grasslands Soil	EIGFPGDIQPRGYSATEVERSDGHDPVDSTGIVADVLKLLGAL
Ga0210403_102330912	3300020580	Soil	REIGFPGDIQPRGYTADEVSRSDGHDPVDNTGIVADVLKLLGSL
Ga0210406_103937331	3300021168	Soil	DIQPRGYTPDEVERSDGHDLVASTGIVADVLKILGAL
Ga0213881_100782811	3300021374	Exposed Rock	GWNDIGFPGDIQPRGYPSDQVERSDGRDPVDDTPIVADVLKFLGAV
Ga0210389_114295962	3300021404	Soil	WKEIGFPGDIQPRGYSADEVERSDGHDPVASTGIVADVLKILGAL
Ga0210386_105475981	3300021406	Soil	AGWRDIGFPGDSQPLGYPAGEVERSDGRDPVAAAGVVADVLKFLGAL
Ga0210383_111253872	3300021407	Soil	NQGLAGWKGIGYPGDSQPLGYSGGEVERSDGRDPVGDAGIVADVLKLLGAL
Ga0210394_108401521	3300021420	Soil	GWKEIGFPGDAQPRGYSATEVERSDGHDPVDSTGIVADVLKLLGAL
Ga0210402_110676572	3300021478	Soil	IQPRGYTADEVSRSDGYDPVDNTGIVADVLKLLGSL
Ga0210410_104853051	3300021479	Soil	YGGNRGLAGWKEIGFPGDIQPRGYSADEVERSDGHDPVASTGIVADVLKILGAL
Ga0126371_101683493	3300021560	Tropical Forest Soil	QPRGYPPGEVEASDGRDPVATAGIVADVLKFLGTL
Ga0126371_109774032	3300021560	Tropical Forest Soil	RDTGFPGDIQPRGYPPGEVEASDGRDPVAAAGIVADVLKFLGTL
Ga0126371_124735542	3300021560	Tropical Forest Soil	AGWKEISYPGDSQPAGYTSDEVERSDGHDPVDETAVVADALKLLGAL
Ga0126371_124829712	3300021560	Tropical Forest Soil	GNDETAGWKEIGFPGDVQPRGYTPDEVERSDGHDPVGHSGIVADVLELLGAL
Ga0126371_126197231	3300021560	Tropical Forest Soil	GWKEIGFPGDIQPRGYTADEVERSDGVDPVENTGIIADVIKLLGVV
Ga0247670_10613962	3300024283	Soil	YSADEVERSDGHDPVSTGNVGHDNTGVVDDVLKLLGAL
Ga0207713_11585542	3300025735	Switchgrass Rhizosphere	IGFPGDVQPRGYSADEVERSDGHDPVGTGNVGTGNVGTGNVGHDNTGVVADVLKLLGAL
Ga0207710_107364322	3300025900	Switchgrass Rhizosphere	KNLVGWKEIGFPGDVQPRGYSADEVERSDGHDPVGTGNVGHENTGVVADVLKLLGAL
Ga0207676_105409441	3300026095	Switchgrass Rhizosphere	YSADEVERSDGHDPVSTGNVGHDNTGVVADVLKLLGAL
Ga0207698_106190212	3300026142	Corn Rhizosphere	EIGFPGDIQPRGYSADEVERSDGHDPVSTGNVGHDNTGVVADVLKLLGAL
Ga0209056_103917311	3300026538	Soil	KNLAGWKEIGFPGDIQPRGYSATEVERSDGHDPVDSTGIVADVLKLLGAL
Ga0209648_103679272	3300026551	Grasslands Soil	GWKEIGFPGDIQPRGYTADEVSRSDGHDPVDNTGIVAEVLKLLGSL
Ga0208240_10379751	3300027030	Forest Soil	IQPRGYTPDEVSRSDGPDPVDQTGIVADVLKLLGVL
Ga0208488_10871831	3300027110	Forest Soil	PGDIQPRGYTGDEVERSDGRDPVDDTSVVAAVLKLLGAL
Ga0209327_10154122	3300027307	Forest Soil	KTTIAIFANSAGWKEIGFPGDIQPRGYTADEVERSDGRDPVGDTGIVGDVLKLLGAL
Ga0209622_10173862	3300027502	Forest Soil	LAGWKEIGFPGDIQPRGYTADEVERSDGHDPVASTGITGEVLKLLGAL
Ga0209178_11465841	3300027725	Agricultural Soil	DIQPRGYSADEVERSDGHDPVGHDNTGIVADVLKLLGAL
Ga0209060_104778772	3300027826	Surface Soil	EIGFPGDIQPRGYTADEVSRSDGHDPVDNTGIVADVLKLLGSLQ
Ga0209274_105280951	3300027853	Soil	AFPGDIQPRGYTPDEVTGSDGHDPVDDTAVVTDVIKLLGAL
Ga0209693_101384872	3300027855	Soil	WQDIGFPGDSQPRGYTSDEVERSDGHDPVDNTGIVADVLRLLGAV
Ga0209693_105363982	3300027855	Soil	DSQPRGYTADEVERSDGRDPVDDTGVVADALKFLGAV
Ga0209579_103418072	3300027869	Surface Soil	NRDLAGWTDLSYPGDSQPLGYPSIEVERSDGHDPVGDASVVADVLKLLGNL
Ga0209006_106651141	3300027908	Forest Soil	SQPLGYAGTEVERSDGHDPVGDDGVVADVLKLLGAL
Ga0209069_103826521	3300027915	Watersheds	IQPRGYTADEVSRSDGPDPVDNTGIVAEVLKLLGSL
Ga0307284_104310311	3300028799	Soil	NKNLVGWKEIGFPGDVQPRGYSADEVERSDGHDPVGTGNVGTGNTGIVADVLKLLGAL
Ga0302235_101949032	3300028877	Palsa	PGDIQPRGYTGDEVERSDGRDPVDDTSVVGAVLKLLGAL
Ga0302177_101949281	3300030053	Palsa	QPRGYPSDEVERSDGRDPVDNTSVLAEVLRLLGAV
Ga0311372_129626561	3300030520	Palsa	GDIQPRGYTGDEVERSDGRDPVDDTSVVGAVLKLLGAL
Ga0311355_105838452	3300030580	Palsa	KDIGFPGDIQPHGYTGDEVERSDGRDPVDDTSVVAAVLKLLGAL
Ga0302313_103341812	3300030693	Palsa	GDIQPRGYTPDEVSRSDGPDPVDNTGIVADVLKLLGAL
Ga0318572_100805622	3300031681	Soil	PGDIQPRGYTPDEVSRSDGPDPVNNTGIVAEVLKLLGAP
Ga0318560_102615012	3300031682	Soil	IQPRGYTPDEVSRSDGPDPVNNTGVVAEVLKLLGAP
Ga0307476_105748151	3300031715	Hardwood Forest Soil	RGLAGWKEIGFPGDIQPRGYTADEVSRSDGHDPVDNTGIVADVLKLLGSL
Ga0307474_116506022	3300031718	Hardwood Forest Soil	YPGDSQPRGYTDDEVTRSDGPDPVDKTPVVAEALKFLGVV
Ga0306918_102392832	3300031744	Soil	NRGQAGWKDIGYPGDIQPRGYSGEEVERSDGRDPVGDTPVVADVLKFLGAL
Ga0306918_115772232	3300031744	Soil	GGNRGLAGWQEIGFPGDIQPRGYTADEVERSDGHDPVASTGITGEVLKLLGAL
Ga0307475_103695662	3300031754	Hardwood Forest Soil	NRGLAGWKEIGFPGDIQPRGYTADEVSRSDGHDPVDNTGIVADVLKLLGSL
Ga0318537_102917611	3300031763	Soil	PGDSQPRGYTGEEVEGSDGRDPVDDTPVVADVLKFLGAV
Ga0318552_100299151	3300031782	Soil	GLAGWKDISYPGDSQPRGYTGEEVEGSDGRDPVDDTPVVADVLKFLGAV
Ga0318503_100179132	3300031794	Soil	PGDIQPRGYTPDEVSRSDGPDPVNNTGVVAEVLKLLGAP
Ga0318550_100377891	3300031797	Soil	DIQPRGYTPDEVSRSDGPDPVNNTGVVAEVLKLLGAP
Ga0307473_111191411	3300031820	Hardwood Forest Soil	VQPRGYSAAEVERSDGHDPVDNTGIVADVIKLLGAL
Ga0318511_102371212	3300031845	Soil	IQPRGYTAGEVERSDGRDPVADSGIVADVLRLLGAL
Ga0318522_100998671	3300031894	Soil	DIGFPGDIQPRGYPPGEVEASDGRDPVAAAGIVADVLKFLGAL
Ga0306923_107348542	3300031910	Soil	AGWQDIGFPGDIQPRGYTADEVERSDGHDPLTSTPIVADVLRLLGAL
Ga0306921_100540181	3300031912	Soil	AGWKDIGYPGDIQPRGYSGEEVERSDGRDPVGDTPVVADVLKFLGAL
Ga0310913_103649302	3300031945	Soil	KEIGFPGDIQPRGYTAGEVERSDGRDPVADSGIVADVLRLLGAL
Ga0310913_107980541	3300031945	Soil	LAGWKDIGFPGDIQPRGYTAEEVSRSDGPDPVDKTGVVADVLKLLGALG
Ga0306926_111030081	3300031954	Soil	QPRGYTAGEVERSDGRDPVADSGIVADVLRLLGAL
Ga0306922_109902902	3300032001	Soil	GFPGDIQPRGYTADEVERSDGHDPVGDTGIVGDVLKLLGAL
Ga0318556_105678411	3300032043	Soil	GNRGLAGWKEIGFPGDIQPRGYTADEVERSDGHDPVAETGIVSEVLKLLGAL
Ga0318570_101153752	3300032054	Soil	KEIGFPGDIQPRGYTPDEVSRSDGPDPVNNTGVVAEVLKLLGAP
Ga0318570_101977891	3300032054	Soil	GNQGLAGWKDIGFPGDIQPRGYTPDEVSRSDGHDPVANTGVVAAVVKLLGGV
Ga0318577_104646312	3300032091	Soil	LAGWRDIGFRGDIQPRGYPPGEVEASDGRDPVAAAGIVADVLKFLGAL
Ga0335082_101405623	3300032782	Soil	IGFPGDVQPRGYSADEVERSDGHDPLGRDNTGVVADVLKLLGAL
Ga0335078_101877831	3300032805	Soil	QEIGFPGDIQPRGYTADEVERSDGHDPVASTAIVADVLKLLGGL
Ga0335075_100961741	3300032896	Soil	DIKYPGDSQPHGYTPDEVSRSDGPDPVGEMPIVTEALKFLGAV
Ga0335075_112228572	3300032896	Soil	RGLAGWKDIDYPGDSQPRGYTPDEVSQSDGRDPVADTGIVAEALKLLGGL
Ga0335083_109828041	3300032954	Soil	DVQPRGYSADEVERSDGHDPLGHGNTGVVADVLKLLGAL
Ga0335073_120692941	3300033134	Soil	VGWKEIGFPGDIQPRGYSADEVERSDGHDPVSTGNVGHDNTGVVADVLKLLGAL
Ga0335077_109051501	3300033158	Soil	GFPGDIQPRGYTADEVERSDGHDPAAATGITGEVLKLLGAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060236

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences