Metagenome / Metatranscriptome Family F060226

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060226
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	52 residues
Representative Sequence	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLKHLQLGQGPGR
Number of Associated Samples	100
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.83 %
% of genes near scaffold ends (potentially truncated)	37.59 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.406 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.564 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.090 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.46% β-sheet: 0.00% Coil/Unstructured: 83.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF14534	DUF4440	3.01
PF13302	Acetyltransf_3	2.26
PF00076	RRM_1	2.26
PF00903	Glyoxalase	1.50
PF13884	Peptidase_S74	1.50
PF00085	Thioredoxin	1.50
PF09954	DUF2188	0.75
PF01513	NAD_kinase	0.75
PF08447	PAS_3	0.75
PF03453	MoeA_N	0.75
PF12681	Glyoxalase_2	0.75
PF14023	DUF4239	0.75
PF00313	CSD	0.75
PF14349	SprA_N	0.75
PF01435	Peptidase_M48	0.75
PF06123	CreD	0.75
PF13430	DUF4112	0.75
PF13579	Glyco_trans_4_4	0.75
PF12680	SnoaL_2	0.75
PF01569	PAP2	0.75
PF04055	Radical_SAM	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	0.75
COG4452	Inner membrane protein CreD involved in colicin E2 resistance	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.41 %
Unclassified	root	N/A	37.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.41 %
Unclassified	root	N/A	37.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.41 %
Unclassified	root	N/A	37.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	27.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	27.07 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	18.80 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	18.80 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.76 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.75 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	18.80 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3.76 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	18.80 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	3.01 %
unclassified Collimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → unclassified Collimonas	0.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	18.80 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3.01 %
Collimonas sp. OK412	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → unclassified Collimonas → Collimonas sp. OK412	0.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig20176	Not Available	840	Open in IMG/M
2162886013\|SwBSRL2_contig_5550245	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
2170459005\|F1BAP7Q01A5Z9U	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
2170459005\|F1BAP7Q01AGC74	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100254132	Not Available	518	Open in IMG/M
3300000891\|JGI10214J12806_10738550	Not Available	533	Open in IMG/M
3300002908\|JGI25382J43887_10378192	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300002908\|JGI25382J43887_10432445	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300002914\|JGI25617J43924_10164329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300004114\|Ga0062593_101086058	Not Available	829	Open in IMG/M
3300004157\|Ga0062590_101098858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	766	Open in IMG/M
3300004157\|Ga0062590_101598797	Not Available	659	Open in IMG/M
3300004157\|Ga0062590_102429618	Not Available	554	Open in IMG/M
3300004157\|Ga0062590_102905780	Not Available	513	Open in IMG/M
3300004479\|Ga0062595_100915753	Not Available	741	Open in IMG/M
3300004479\|Ga0062595_101859255	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005093\|Ga0062594_101171666	Not Available	759	Open in IMG/M
3300005172\|Ga0066683_10016739	All Organisms → cellular organisms → Bacteria	4016	Open in IMG/M
3300005293\|Ga0065715_10236661	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300005294\|Ga0065705_10148946	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300005294\|Ga0065705_10341967	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005329\|Ga0070683_100457785	Not Available	1217	Open in IMG/M
3300005365\|Ga0070688_100180247	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300005436\|Ga0070713_100445158	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300005439\|Ga0070711_101622934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300005457\|Ga0070662_100677106	Not Available	871	Open in IMG/M
3300005467\|Ga0070706_102062430	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005574\|Ga0066694_10325612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M
3300005577\|Ga0068857_100817453	Not Available	890	Open in IMG/M
3300006175\|Ga0070712_100152009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1778	Open in IMG/M
3300006175\|Ga0070712_100313028	Not Available	1274	Open in IMG/M
3300006175\|Ga0070712_100458510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1062	Open in IMG/M
3300006175\|Ga0070712_100825145	Not Available	797	Open in IMG/M
3300006796\|Ga0066665_11675321	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009012\|Ga0066710_100860907	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300009012\|Ga0066710_103808263	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300009012\|Ga0066710_104542129	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300009137\|Ga0066709_102102624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300010323\|Ga0134086_10059395	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300010323\|Ga0134086_10476663	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010333\|Ga0134080_10023672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2298	Open in IMG/M
3300010375\|Ga0105239_12476169	Not Available	605	Open in IMG/M
3300011119\|Ga0105246_12060966	Not Available	552	Open in IMG/M
3300011332\|Ga0126317_10692404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012207\|Ga0137381_11451525	Not Available	578	Open in IMG/M
3300012353\|Ga0137367_11140300	Not Available	524	Open in IMG/M
3300012354\|Ga0137366_10099986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2199	Open in IMG/M
3300012354\|Ga0137366_10821074	Not Available	659	Open in IMG/M
3300012683\|Ga0137398_10714684	Not Available	697	Open in IMG/M
3300012685\|Ga0137397_10121652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1922	Open in IMG/M
3300012885\|Ga0157287_1037791	Not Available	714	Open in IMG/M
3300012892\|Ga0157294_10048652	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300012906\|Ga0157295_10082927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	843	Open in IMG/M
3300012930\|Ga0137407_12382915	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012951\|Ga0164300_10267049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → unclassified Collimonas → Collimonas sp. OK412	878	Open in IMG/M
3300012955\|Ga0164298_10878532	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012957\|Ga0164303_10000383	All Organisms → cellular organisms → Bacteria	10029	Open in IMG/M
3300012957\|Ga0164303_10522006	Not Available	765	Open in IMG/M
3300012957\|Ga0164303_11154637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300012958\|Ga0164299_10242327	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300012960\|Ga0164301_10011830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3567	Open in IMG/M
3300012984\|Ga0164309_11481456	Not Available	580	Open in IMG/M
3300012986\|Ga0164304_11681830	Not Available	530	Open in IMG/M
3300013297\|Ga0157378_12385204	Not Available	581	Open in IMG/M
3300013306\|Ga0163162_12327574	Not Available	616	Open in IMG/M
3300013308\|Ga0157375_12652200	Not Available	599	Open in IMG/M
3300015242\|Ga0137412_10041014	All Organisms → cellular organisms → Bacteria	3780	Open in IMG/M
3300015371\|Ga0132258_10573642	All Organisms → cellular organisms → Bacteria	2830	Open in IMG/M
3300015371\|Ga0132258_12513045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1288	Open in IMG/M
3300015372\|Ga0132256_101468272	Not Available	793	Open in IMG/M
3300015373\|Ga0132257_102927551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300015374\|Ga0132255_100540974	Not Available	1716	Open in IMG/M
3300015374\|Ga0132255_102257239	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300015374\|Ga0132255_102685524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300015374\|Ga0132255_102807752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300018028\|Ga0184608_10211893	Not Available	850	Open in IMG/M
3300018075\|Ga0184632_10073410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1490	Open in IMG/M
3300018076\|Ga0184609_10467318	Not Available	578	Open in IMG/M
3300018431\|Ga0066655_10760210	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300019361\|Ga0173482_10016135	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300019866\|Ga0193756_1004420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1658	Open in IMG/M
3300019868\|Ga0193720_1061313	Not Available	520	Open in IMG/M
3300019869\|Ga0193705_1022279	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300019874\|Ga0193744_1095113	Not Available	556	Open in IMG/M
3300019877\|Ga0193722_1004120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3588	Open in IMG/M
3300019878\|Ga0193715_1021436	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300019879\|Ga0193723_1059803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1110	Open in IMG/M
3300019883\|Ga0193725_1006812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3291	Open in IMG/M
3300020000\|Ga0193692_1037303	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300020000\|Ga0193692_1045495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300020006\|Ga0193735_1001124	All Organisms → cellular organisms → Bacteria	8562	Open in IMG/M
3300020006\|Ga0193735_1005143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4198	Open in IMG/M
3300020006\|Ga0193735_1186550	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300020010\|Ga0193749_1014010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1569	Open in IMG/M
3300020012\|Ga0193732_1082558	Not Available	520	Open in IMG/M
3300021078\|Ga0210381_10312262	Not Available	569	Open in IMG/M
3300021080\|Ga0210382_10245004	Not Available	784	Open in IMG/M
3300021080\|Ga0210382_10393391	Not Available	613	Open in IMG/M
3300021344\|Ga0193719_10345750	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300021411\|Ga0193709_1001111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8214	Open in IMG/M
3300021415\|Ga0193694_1001734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3114	Open in IMG/M
3300022737\|Ga0247747_1054095	Not Available	509	Open in IMG/M
3300023058\|Ga0193714_1000517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6296	Open in IMG/M
3300025915\|Ga0207693_10734392	Not Available	763	Open in IMG/M
3300025915\|Ga0207693_10748356	Not Available	755	Open in IMG/M
3300025930\|Ga0207701_10191262	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300025930\|Ga0207701_10243611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1570	Open in IMG/M
3300025933\|Ga0207706_10325227	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300026323\|Ga0209472_1027588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2629	Open in IMG/M
3300026536\|Ga0209058_1305210	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300026540\|Ga0209376_1372809	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300028718\|Ga0307307_10304469	Not Available	514	Open in IMG/M
3300028885\|Ga0307304_10607755	Not Available	507	Open in IMG/M
3300030916\|Ga0075386_10036015	Not Available	1298	Open in IMG/M
3300030972\|Ga0075400_10006905	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031057\|Ga0170834_103299119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300031231\|Ga0170824_102847749	Not Available	540	Open in IMG/M
3300031231\|Ga0170824_105694237	Not Available	654	Open in IMG/M
3300031231\|Ga0170824_107971174	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300031231\|Ga0170824_111788443	Not Available	670	Open in IMG/M
3300031231\|Ga0170824_113516744	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300031446\|Ga0170820_10056268	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031446\|Ga0170820_13414713	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	537	Open in IMG/M
3300031446\|Ga0170820_13600387	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300031446\|Ga0170820_16580670	Not Available	647	Open in IMG/M
3300031474\|Ga0170818_113324887	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300031720\|Ga0307469_11240814	Not Available	706	Open in IMG/M
3300031740\|Ga0307468_100871336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300031943\|Ga0310885_10666221	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300032180\|Ga0307471_100191420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2033	Open in IMG/M
3300032205\|Ga0307472_100244248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1403	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.47%
Host-Associated	Host-Associated	13.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.20%
Plants	Host-Associated → Plants	13.53%
Aquatic	Environmental → Aquatic	5.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Freshwater	Environmental → Aquatic → Freshwater	3.01%
Sediment	Environmental → Aquatic → Sediment	2.26%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.93%
Loam	Environmental → Terrestrial → Soil → Loam	8.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.01%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.01%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.02%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.01%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.26%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.50%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030972	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_00298240	2140918007	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGSPQDLKSLLKLLQLGQGPGR
SwBSRL2_0342.00004270	2162886013	Switchgrass Rhizosphere	VRRKKKKTKERVKVDDLKPAKDPKGGMPQGPSENVEWILKHLQLGERPPGSTPR
E41_04032210	2170459005	Grass Soil	MTRSGTVASKGQVTNVQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPPDLKSLLKHLQL
E41_02955300	2170459005	Grass Soil	MEDKKKKTKKGVKVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPGR
INPhiseqgaiiFebDRAFT_1002541322	3300000364	Soil	MPGKQKKTKKRVKIDDLKPAKDPKGGTSRGPTRDLEWLLRHLQLGQEPGHRDSKPK*
JGI10214J12806_107385501	3300000891	Soil	MPGKKKRTRKRIKVDDLNPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQTDSKPKSGS*
JGI10216J12902_1019979501	3300000956	Soil	MQGEKKRTKKQVKIHDLTPAKNPKGGMLQGPPQDLNWLLKHLQVGLGLGGGGKTGPNSPL
JGI25382J43887_103781922	3300002908	Grasslands Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRHLQLGQGPGR*
JGI25382J43887_104324451	3300002908	Grasslands Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRHLELGQGPGR*
JGI25617J43924_101643293	3300002914	Grasslands Soil	QDKKKKTKKVLKVDDLEPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR*
Ga0062593_1010860581	3300004114	Soil	MQGKKKKTKKRIKVDDLKPAKDPKGGTTRGPPHDLKWLLKHLQLGQEPSQTDSKPK
Ga0062590_1010988582	3300004157	Soil	MQDKKEKTKKAVKVYDLKPAKDPKGGGMPQGSPQGLKSLLRHLQLGQRPGR*
Ga0062590_1015987971	3300004157	Soil	MQGKKKKTKKRIKVDDLKPAKDPKGGTTRGPARDLKWLLKHLQLG
Ga0062590_1024296182	3300004157	Soil	MPGKQKKTKKRVKIDDLKPAKDPKGGASRGAPRDLEWLLRHLQLGQEPGHRDSKPK*
Ga0062590_1029057801	3300004157	Soil	MPGKKKKTKKRIKVADLRPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQPDTNPKSAS*
Ga0062595_1009157531	3300004479	Soil	MPGKKKRTRKRIKVDDLNPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQADSKPKSGS*
Ga0062595_1018592552	3300004479	Soil	TKKVVKVYDLKPAKDPKGGGLPRGSPQDLKSLLRHLQLGQSPAGSGKIEAS*
Ga0062594_1011716661	3300005093	Soil	MPGKKKKTKKRIKVADLRPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQTDTKPKSAS*
Ga0066683_100167394	3300005172	Soil	MRGKQKKTKKRVKVDDLKPAKDPKGGMPQGPPQDLKWLLKHLQLGQRRPGGGR*
Ga0065704_101769923	3300005289	Switchgrass Rhizosphere	VVKVYDLKPAKDPKGGGLPRGSPQDLKSLLRHLQLGQSPAGSGKIEAS*
Ga0065715_102366612	3300005293	Miscanthus Rhizosphere	MSGKKNKPKKRIKVDDLNPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQTDSKSKPHS*
Ga0065705_101489462	3300005294	Switchgrass Rhizosphere	VRRKKKKTKERVKVDDLKPAKDPKGGMPQGPSENVEWILKHLQLGERPPGSTPR*
Ga0065705_103419672	3300005294	Switchgrass Rhizosphere	MQDKKKKTKKVVKVYDLKPAKDPKGGGLPRGSPQDLKSLLRHLQLGQSPAGSGKIEAS*
Ga0070683_1004577853	3300005329	Corn Rhizosphere	VRRKKKKTTKMVKVDDLKPAKDPKGGMPQGPSENVEWILKHLQLGERPPGSTPR*
Ga0070688_1001802471	3300005365	Switchgrass Rhizosphere	MSGKKNKPKKRIKVDDLNPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQ
Ga0070713_1004451582	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQEKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR*
Ga0070711_1016229342	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	KTKKGVKVDDLKPAKDPKGGGMPQGFPPDLKSLLKHLQLGQGPGR*
Ga0070662_1006771061	3300005457	Corn Rhizosphere	MSGKKNKPKKRIKVDDLNPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQTDSKSKPHS*KISEKST
Ga0070706_1020624302	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KGRVTNMQEKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRHLQLGQGPGR*
Ga0066694_103256122	3300005574	Soil	MRGKQKKTKKRVKVDDLKPAKDPKGGMHQGPSENVKWILSHLQLGQRRPGGGR*
Ga0068857_1008174531	3300005577	Corn Rhizosphere	MQEKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSL
Ga0070712_1001520093	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQEKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGP
Ga0070712_1003130281	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR*
Ga0070712_1004585101	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQDKKEKTKKGVKVDDLKPAKDPKGGGMPQGFPSDLKSLLKHLQLGQGPGR*
Ga0070712_1008251454	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KTKKGVKVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPGR*
Ga0066665_116753213	3300006796	Soil	DKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRHLELGQGPGR*
Ga0066710_1008609071	3300009012	Grasslands Soil	DKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRHLELGQGPGR
Ga0066710_1038082632	3300009012	Grasslands Soil	DKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRHLQLGQGPGR
Ga0066710_1045421292	3300009012	Grasslands Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRHL
Ga0066709_1021026243	3300009137	Grasslands Soil	DKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRHLQLGQGPGR*
Ga0134086_100593951	3300010323	Grasslands Soil	MRGKQKKTKKRVKVDDLKPAKDPKGGMPQGPSENVKWIL
Ga0134086_104766631	3300010323	Grasslands Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLK
Ga0134080_100236725	3300010333	Grasslands Soil	MRGKQKKTKKRVKVDDLKPAKDPKGGMHQGPSENVKWILSHLQLGQRPPGGGR*
Ga0105239_124761691	3300010375	Corn Rhizosphere	MLGKKKRTRKRIKVDDLNPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQADSKPKSGS*
Ga0105246_120609661	3300011119	Miscanthus Rhizosphere	MPGKKKKTKKRIKVDDLEPAKDPKGGMTRGPPHDLKWLLKHLQLGQGPGR*
Ga0126317_106924042	3300011332	Soil	MPGKKKKTKKRIKVDDLKPAKDPMGGMTRGPPHDLMWVLKHLQLGQDPSQTDPKPKSGS*
Ga0137381_114515251	3300012207	Vadose Zone Soil	MRGKKKKTKKGFKVDDLKPARDPKAGMPQSPARDLKWILKHLQLGQGPGGGGKTGPNSPL
Ga0137367_111403001	3300012353	Vadose Zone Soil	MQGKQKKTKKRVKVDDLKPAKDPKAGMPQGPPHDLKWLLKHLQLGQRPPGSTPR*
Ga0137366_100999862	3300012354	Vadose Zone Soil	MQDKKKRTKKDVKVDDLKPAKDPKGGMLKGPPQDLKWLWKHLQVGLGPSGGG*
Ga0137366_108210741	3300012354	Vadose Zone Soil	MRGKKKKTKKGFKVDDLKPARDPKGGMPQSPARDLKWILKHLQLGQGPGGGGKTGPNSPL
Ga0137398_107146841	3300012683	Vadose Zone Soil	MQDKKKKTKKVLKVDDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR*
Ga0137397_101216523	3300012685	Vadose Zone Soil	MQDKKKKTKKVLKVDDLEPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR*
Ga0157287_10377911	3300012885	Soil	MPGKKKRTRKRIKVDDLNPAKDPKGGMTRGPPHDLKWLL
Ga0157294_100486521	3300012892	Soil	MPGKKKRTRKRIKVDDLNPAKDPKGGMTRGPPRDLKWLLKHLQLGQEPSQADSKPKSGS*
Ga0157295_100829272	3300012906	Soil	KTKKRIKVDDLKPAKDPKGGTTRGPPHDLKWLLKHLQLGQEPSQTDSKPKSGS*
Ga0137407_123829151	3300012930	Vadose Zone Soil	SKGQVTNMRGKKKKTKKGFKVDDLKPARDPKGGMPQGPARDLKWILKHLQLGQGR*
Ga0164300_102670491	3300012951	Soil	MPGKKKRTRKRIKVDDLNPAKDPKGGMTRGPPHDLKWLLKHLQLGQEP
Ga0164298_108785321	3300012955	Soil	MEDKKKKTKKGVKVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPGK*
Ga0164303_1000038310	3300012957	Soil	MEDKKKKTKKGVKVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPGR*
Ga0164303_105220061	3300012957	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLGQGPGR*
Ga0164303_111546372	3300012957	Soil	VEDKKKKTRKAVKVGDLKPAKDPKGGGMPQDSPQDVKSLLKHLQLGLGSGR*
Ga0164299_102423273	3300012958	Soil	MQDKKKKTKKGVKVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPGR*
Ga0164301_100118304	3300012960	Soil	MQDKKKKTKKGVKVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPGK*
Ga0164309_114814562	3300012984	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQDSPQDVKSLLKHLQLGLGSGR*
Ga0164304_116818301	3300012986	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGRGPGR*
Ga0157378_123852042	3300013297	Miscanthus Rhizosphere	MPGKKKRTRKRIKVDDLNPAKDPKGGMTRGPPRDLKWLL
Ga0163162_123275741	3300013306	Switchgrass Rhizosphere	MPGKKKKTKKRIKVADLRPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQTDTDENRPPEKF*
Ga0157375_126522001	3300013308	Miscanthus Rhizosphere	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGSPQDVKSLL
Ga0137412_100410145	3300015242	Vadose Zone Soil	MEDKKKKTKKAVKVGDLKPAKDPKGGGMPQGSPQDVRSLLKLLQLGQGPGR*
Ga0132258_105736424	3300015371	Arabidopsis Rhizosphere	MQGKQKKTKKRVKVEDLKPAKDPKGGMTQGPPRDLKWLLKHLQLGQEPSQTDSKPKSAS*
Ga0132258_125130452	3300015371	Arabidopsis Rhizosphere	MPDKKRRTKKAVKVGDLKPAKDPKGGGMPRGSPQDLKSLLKHLQLGVRVPADRR*
Ga0132256_1014682721	3300015372	Arabidopsis Rhizosphere	RPWGDDILNMQDKKKKTKKGVKVDDLKPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQTDSKPKSAS*
Ga0132257_1029275513	3300015373	Arabidopsis Rhizosphere	KKKTKKVVKVYDLKPAKDPKEGGMPQDLKSLLRHLQLGVRVPAGSGSP*
Ga0132255_1005409744	3300015374	Arabidopsis Rhizosphere	MPHKKRRTKKAVKVGDLKPAKDPKGGGMPQGSPQDLKSLLKHLQLGVRVPAD
Ga0132255_1022572392	3300015374	Arabidopsis Rhizosphere	MQDKKKKTKKVVKVYDLKPAKDPKGGGMPQGSPQDLKSLLRHLQLGQGPGR*
Ga0132255_1026855242	3300015374	Arabidopsis Rhizosphere	MQDKKKKTKKAVKVGDLKPAKDPKGGGIPQGFPQD
Ga0132255_1028077521	3300015374	Arabidopsis Rhizosphere	KGQVTNMPDKKRRTKKSVKVGDLKPAKDPKGGGMLQGSPQDLKSLLKHLQLGQGPGR*
Ga0184608_102118932	3300018028	Groundwater Sediment	VQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLKHLQLGQGPGR
Ga0184632_100734103	3300018075	Groundwater Sediment	MQDKKKKTQKAVKVGDLKPAKDPKGGGMPQGFPQDAKSLLKHLQLGQGPGR
Ga0184609_104673182	3300018076	Groundwater Sediment	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPKGSPQDLKSLL
Ga0066655_107602101	3300018431	Grasslands Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRHLELGQGPGR
Ga0173482_100161354	3300019361	Soil	MPGKKKRTRKRIKVDDLNPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQADSKPKSGS
Ga0193756_10044203	3300019866	Soil	MQDKKKKTNKAVKVYDLKPAKDPKEGGTPQDLKSLLRHLQLGVRVPAGSGSP
Ga0193720_10613131	3300019868	Soil	MPGKKKKTKKRIKVDDLKPAKDPKGGTTRGPPHDLKWLLKHLQLGQEPSQTDPKSKSDS
Ga0193705_10222793	3300019869	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR
Ga0193744_10951131	3300019874	Soil	QRLANCKGRVTNMQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR
Ga0193722_10041203	3300019877	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGRGPGR
Ga0193715_10214362	3300019878	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLKHLQLGQGPGR
Ga0193723_10598033	3300019879	Soil	VQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR
Ga0193725_10068121	3300019883	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKS
Ga0193692_10373031	3300020000	Soil	MQGKKKKTKKRIKVDDLNPAKDPKGGMTRGPPRDLKWLLKHLQLGQEPTETDSKRKSAS
Ga0193692_10454951	3300020000	Soil	MQDKKKKTKKAVKVYDLKPAKDPKGRGMPQGSPQDLKSLLRHLQLGQGPAR
Ga0193735_10011242	3300020006	Soil	MQDKKKKTKKVLKVDDLEPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR
Ga0193735_10051435	3300020006	Soil	MQDKKKKTKKAVKVYDLKPAKDPKGGGMPQGSPQDLKSLLRHLQLGQGPGR
Ga0193735_11865501	3300020006	Soil	MQGKQKKTKKRVKVDDLKPAKDPKAGMPQGPPHDLKWLLKHLQLG
Ga0193749_10140101	3300020010	Soil	MQDKKKKTKKVLKVDDLKPAKDPKGGGMPQGFPQDVKSLLKHLQLGQGPGR
Ga0193732_10825581	3300020012	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGSPQDVKSLLKLLQLGQGPGR
Ga0210381_103122621	3300021078	Groundwater Sediment	MQDKKKKTKKVLKVDDLEPAKDPKGGGMPQGFPQDVKSLLKYLQLGQGPGR
Ga0210382_102450041	3300021080	Groundwater Sediment	MQEKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQVGQGPGR
Ga0210382_103933911	3300021080	Groundwater Sediment	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPSPQNLKSL
Ga0193719_103457501	3300021344	Soil	VTSMQDKKKKTKKAVKVYDLKPAKDPKGGGMPQGSPQDLKSLLRHLQLGQGPGR
Ga0193709_10011113	3300021411	Soil	MQDKKKKTNKAVKVYDLKPAKDPKEGGMPQDLKSLLRHLQLGVRVPAGSGSP
Ga0193694_10017345	3300021415	Soil	MQDKKKRTKKAVKVGDLKPAKDPKGGGMPQGSPQDVKSLLKLLQLGQGPGR
Ga0247747_10540951	3300022737	Soil	MPGKKKRTRKRIKVDDLNPAKDPKGGMTRGPPHDLKWLLKHLQLGQ
Ga0193714_10005173	3300023058	Soil	MHDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLKHLQLGQGPGR
Ga0207693_107343922	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQDKKRKTKKGVKVDDLKPAKDPKGGGMPQGFPSDLKSLLKHLQLGQGPGR
Ga0207693_107483561	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQEKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDVKSLLKHLQ
Ga0207701_101912621	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPGKKKKTKKRVKVDDLKPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPNQT
Ga0207701_102436112	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	KKKTKKMVKVDDLKPAKDPKGGGMPQGPSENVEWILKHLQLGERPPGSTPR
Ga0207706_103252272	3300025933	Corn Rhizosphere	MPGKKKKTKKRIKVADLRPAKDPKGGMTRGPPHDLKWLLKHLQLGQEPSQPDTNPKSAS
Ga0209472_10275881	3300026323	Soil	MRGKQKKTKKRVKVDDLKPAKDPKGGMPQGPPQDLKWLLKHLQLGQRRPGGGR
Ga0209058_13052102	3300026536	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSL
Ga0209376_13728091	3300026540	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLRLLQLGQGPGR
Ga0307307_103044691	3300028718	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGSPQDVKSLLKLLQLGQG
Ga0307304_106077551	3300028885	Soil	MQDKKKKTKKAVKVGDLKPAKDPKGGGMPQGFPQDLKSLLKH
Ga0075386_100360153	3300030916	Soil	MRPWGHDILNMEDKKKKTKKGVKVDDLKPAKDPKGGGMPQGSPQDIESLLQHLQLGLGPG
Ga0075400_100069052	3300030972	Soil	MRPWGHDILNMEDKKKKTKKGVKVDDLKPAKDPKGGGMPQGSLQDIESLLKHLQLAQGPG
Ga0170834_1032991191	3300031057	Forest Soil	MRSGCRDAQVTNMQDKKKKTKIRVKVDDLKPAKDPKGGGMPQGSPQDVKSLLKHLQL
Ga0170824_1028477491	3300031231	Forest Soil	HKQSSKGQVTNVEDKKKKTRKAVKVGDLKPAKDPKGGGMPQGSPQDVKSLLKHLQLGLGPGR
Ga0170824_1056942371	3300031231	Forest Soil	MQDKKRKTKKAVKVGDLKPAKDPKGGGMPQGSPQDVKS
Ga0170824_1079711742	3300031231	Forest Soil	MRPWGHDILNMEDKKKKTKQGVKVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPG
Ga0170824_1117884432	3300031231	Forest Soil	MQDKKKRTKKAVKVGDLKPAKDPTGGGMPQSSPQDLKSLLKHLQLGQGPDR
Ga0170824_1135167441	3300031231	Forest Soil	MQDKKKKTKKGVKVYDLKPAKDPKGGGLPQGSPQDLKSLLRHLQLGRGPGR
Ga0170820_100562681	3300031446	Forest Soil	VQLLEAKAIDILNMQDKKKKTKKGVEVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPGR
Ga0170820_134147131	3300031446	Forest Soil	KKAVKVGDLKPAKDPKGGGMPQGSPQDLKSLLKHLQLGQGPGR
Ga0170820_136003872	3300031446	Forest Soil	MRPWGRDILNMEDKKKKTKQGVKVDDLKPAKDPKGGGMPQGSPQDIQSLLKHLQLGQGPG
Ga0170820_165806701	3300031446	Forest Soil	VGTRHFDVQDKKKKTKKGVKVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPGR
Ga0170818_1133248872	3300031474	Forest Soil	MQDKKKKTNKAVKVYDLKPAKGPKEGGMPQDLKSLLRHLQLGVRVPAGSGSP
Ga0307469_112408142	3300031720	Hardwood Forest Soil	MRPWGHDILNMQDKKKKTKKGVKVDDLKPAKDPKGGGMPQGFPPDLKSLLKHLQLGQGPGGGG
Ga0307468_1008713362	3300031740	Hardwood Forest Soil	MRPWGHDILNMEDKKKKTKKGVKVDDLKPAKDPKGGGMPQGSLQDIKSLLKHLQLAQGPG
Ga0310885_106662211	3300031943	Soil	MQDKKKKTKKAVKVGDLKPAKDPEGGGLPQGSPQDLKSLLRHLQLGQGPAR
Ga0307471_1001914202	3300032180	Hardwood Forest Soil	MQDKKKKTKKGGKVDDLKPARDPNGGMPQGPLQDPKWILKHLQLGQGPGGGGETGPNSPL
Ga0307472_1002442481	3300032205	Hardwood Forest Soil	MQDKKKKTKKEVKVDDLKPAKDPKGGGIPQGFPPDLKSLLKHLQLGQRPGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060226

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences