Metagenome / Metatranscriptome Family F060221

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F060221
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	94 residues
Representative Sequence	VSSNQVANAPNRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTP
Number of Associated Samples	109
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.99 %
% of genes near scaffold ends (potentially truncated)	97.74 %
% of genes from short scaffolds (< 2000 bps)	95.49 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (77.444 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.045 % of family members)
Environment Ontology (ENVO)	Unclassified (31.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.910 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.87% β-sheet: 18.48% Coil/Unstructured: 70.65%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01548	DEDD_Tnp_IS110	0.75
PF03795	YCII	0.75
PF01663	Phosphodiest	0.75
PF05199	GMC_oxred_C	0.75
PF12833	HTH_18	0.75
PF13495	Phage_int_SAM_4	0.75
PF04951	Peptidase_M55	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.75
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.20 %
Unclassified	root	N/A	21.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.44 %
Unclassified	root	N/A	21.80 %
Viruses	superkingdom	All Organisms → Viruses	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.44 %
Unclassified	root	N/A	21.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.18 %
Unclassified	root	N/A	21.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	66.92 %
Unclassified	root	N/A	21.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.92 %
Unclassified	root	N/A	21.80 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.92 %
Unclassified	root	N/A	21.80 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.92 %
Unclassified	root	N/A	21.80 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.92 %
Unclassified	root	N/A	21.80 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103168693	Not Available	505	Open in IMG/M
3300002245\|JGIcombinedJ26739_100299013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1494	Open in IMG/M
3300002557\|JGI25381J37097_1092132	Not Available	508	Open in IMG/M
3300004156\|Ga0062589_102041233	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300004479\|Ga0062595_100841278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300005332\|Ga0066388_105371465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300005363\|Ga0008090_15494148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300005434\|Ga0070709_11538757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005454\|Ga0066687_10845584	Not Available	545	Open in IMG/M
3300005549\|Ga0070704_100538089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300005764\|Ga0066903_105611392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300005921\|Ga0070766_11023097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300005995\|Ga0066790_10389264	Not Available	596	Open in IMG/M
3300006175\|Ga0070712_100405881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300006903\|Ga0075426_10398416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300006904\|Ga0075424_101800619	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300009545\|Ga0105237_12758766	Not Available	502	Open in IMG/M
3300010043\|Ga0126380_11021907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300010043\|Ga0126380_11876607	Not Available	544	Open in IMG/M
3300010048\|Ga0126373_11438493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300010358\|Ga0126370_11194523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300010359\|Ga0126376_11051338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300010359\|Ga0126376_12039162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300010360\|Ga0126372_13087891	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010361\|Ga0126378_10730118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300010361\|Ga0126378_11648841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300010362\|Ga0126377_10483097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300010362\|Ga0126377_12405849	Not Available	603	Open in IMG/M
3300010366\|Ga0126379_10177862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2019	Open in IMG/M
3300010366\|Ga0126379_10593777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1192	Open in IMG/M
3300010366\|Ga0126379_11258309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300010379\|Ga0136449_104163714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300010398\|Ga0126383_11795075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300011120\|Ga0150983_11703921	Not Available	508	Open in IMG/M
3300011269\|Ga0137392_10312521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300012211\|Ga0137377_11310860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300012361\|Ga0137360_10851874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300012362\|Ga0137361_11083637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300012917\|Ga0137395_10679674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300012924\|Ga0137413_10572109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300012971\|Ga0126369_13066673	Not Available	547	Open in IMG/M
3300013308\|Ga0157375_13564235	Not Available	518	Open in IMG/M
3300015193\|Ga0167668_1026949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1277	Open in IMG/M
3300015373\|Ga0132257_103082844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300016270\|Ga0182036_11245681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300016270\|Ga0182036_11762005	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300016294\|Ga0182041_10450225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300016294\|Ga0182041_11366998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300016294\|Ga0182041_11546034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300016319\|Ga0182033_10977745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300016319\|Ga0182033_11525023	Not Available	603	Open in IMG/M
3300016341\|Ga0182035_12061300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300016357\|Ga0182032_11092447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300016404\|Ga0182037_10958520	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300016404\|Ga0182037_11780875	Not Available	550	Open in IMG/M
3300016404\|Ga0182037_11998063	Not Available	520	Open in IMG/M
3300016445\|Ga0182038_10845313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300016445\|Ga0182038_11286065	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300016445\|Ga0182038_12163503	Not Available	505	Open in IMG/M
3300017932\|Ga0187814_10434646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300017947\|Ga0187785_10087675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300017961\|Ga0187778_11249786	Not Available	521	Open in IMG/M
3300017970\|Ga0187783_10115325	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300017970\|Ga0187783_10435941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300017970\|Ga0187783_10766903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300017993\|Ga0187823_10082263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300018007\|Ga0187805_10002190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7464	Open in IMG/M
3300020199\|Ga0179592_10405340	Not Available	594	Open in IMG/M
3300020580\|Ga0210403_11469960	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300020583\|Ga0210401_11387453	Not Available	560	Open in IMG/M
3300021178\|Ga0210408_10419699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300021180\|Ga0210396_10413614	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300021478\|Ga0210402_10740046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300021560\|Ga0126371_13154318	Not Available	558	Open in IMG/M
3300025544\|Ga0208078_1054660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300025898\|Ga0207692_10575700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300025900\|Ga0207710_10422100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300025906\|Ga0207699_10177968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1428	Open in IMG/M
3300025906\|Ga0207699_10313652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300025914\|Ga0207671_11537241	Not Available	513	Open in IMG/M
3300026217\|Ga0209871_1035253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300026277\|Ga0209350_1104241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300026294\|Ga0209839_10287222	Not Available	507	Open in IMG/M
3300026309\|Ga0209055_1022631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2993	Open in IMG/M
3300026360\|Ga0257173_1042762	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300026528\|Ga0209378_1157310	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300026557\|Ga0179587_10463589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300026847\|Ga0207802_1016313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300026854\|Ga0207727_107080	All Organisms → Viruses → Predicted Viral	1131	Open in IMG/M
3300026895\|Ga0207758_1004613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1517	Open in IMG/M
3300026898\|Ga0207788_1015628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300026921\|Ga0207860_1040186	Not Available	511	Open in IMG/M
3300026990\|Ga0207824_1007742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300027000\|Ga0207803_1001629	All Organisms → cellular organisms → Bacteria → Acidobacteria	3682	Open in IMG/M
3300027000\|Ga0207803_1025417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300027024\|Ga0207819_1001738	All Organisms → cellular organisms → Bacteria → Acidobacteria	3754	Open in IMG/M
3300027050\|Ga0209325_1045746	Not Available	530	Open in IMG/M
3300027326\|Ga0209731_1071891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300027502\|Ga0209622_1021217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300027645\|Ga0209117_1029223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1731	Open in IMG/M
3300029636\|Ga0222749_10097503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1376	Open in IMG/M
3300030991\|Ga0073994_10039015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300031474\|Ga0170818_113156130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300031545\|Ga0318541_10450561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300031546\|Ga0318538_10537727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300031668\|Ga0318542_10187493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300031718\|Ga0307474_11607358	Not Available	510	Open in IMG/M
3300031719\|Ga0306917_11104039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300031744\|Ga0306918_11532352	Not Available	509	Open in IMG/M
3300031753\|Ga0307477_10474129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300031754\|Ga0307475_10723951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300031754\|Ga0307475_11137811	Not Available	610	Open in IMG/M
3300031797\|Ga0318550_10567783	Not Available	546	Open in IMG/M
3300031820\|Ga0307473_10305495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300031833\|Ga0310917_10594869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300031879\|Ga0306919_10952633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300031890\|Ga0306925_11622422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300031897\|Ga0318520_10372303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300031912\|Ga0306921_12483001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300031942\|Ga0310916_10822906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300031942\|Ga0310916_11582875	Not Available	532	Open in IMG/M
3300031945\|Ga0310913_10555828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300031945\|Ga0310913_10702375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300031945\|Ga0310913_11106795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300031954\|Ga0306926_11642031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300032001\|Ga0306922_10115662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2849	Open in IMG/M
3300032001\|Ga0306922_12126248	Not Available	543	Open in IMG/M
3300032035\|Ga0310911_10506783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300032059\|Ga0318533_11219296	Not Available	550	Open in IMG/M
3300032059\|Ga0318533_11231068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300032094\|Ga0318540_10161005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300032261\|Ga0306920_101536705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300033289\|Ga0310914_10724569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.74%
Host-Associated	Host-Associated	5.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.48%
Plants	Host-Associated → Plants	5.26%
Aquatic	Environmental → Aquatic	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.51%
Freshwater	Environmental → Aquatic → Freshwater	2.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.42%
Loam	Environmental → Terrestrial → Soil → Loam	18.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.26%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.01%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.50%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026854	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 48 (SPAdes)	Environmental	Open in IMG/M
3300026895	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1031686932	3300000955	Soil	VSSNQVANAPTRRSSRISKAIMLAVQSADASRAPNREEVTTGSISCHGCTYKMRHEPRPGDIVVLD
JGIcombinedJ26739_1002990133	3300002245	Forest Soil	VSSNQVANVPKRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGEMVVLDTGLSTGHSGFPSMARVKSIQRINTSNDPTYNVGVELEIAGNIWGISSP
JGI25381J37097_10921321	3300002557	Grasslands Soil	VSSNQVANAPKRRSSRISKAIMLAVQSVDPSRASYREEVTTGSISCHGCTYKMRYEPRPGDIVVLDTGSGS
Ga0062589_1020412332	3300004156	Soil	MTCNGLYPMRMGEEEGPVSSNQVANVPKRRSSRISKAIMLAVKSVDASHAPYREEVTTGSISCHGCTYKIRHEPRPGDMVVLDTGLGSTGHSGFPSMARVKSIQRLNTSNDPTYNVGVELEIAGNIWGISSP
Ga0062595_1008412781	3300004479	Soil	MSSSQVAPAPGRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDMVVLDTGLGSTGHSGFPSMARVKSIQRLNTSN
Ga0066388_1053714651	3300005332	Tropical Forest Soil	VLSNQVANAPNRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSAGHSGFPSRARVKSIQRLNTSNDATYNVGVELEIAGNIWGISSP
Ga0008090_154941481	3300005363	Tropical Rainforest Soil	VSFNQVATAVANAPKRRSSRISKAIMLAVQSVDLYPALSYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFPSRARVKSIQRLNTPNDPMYNVG
Ga0070709_115387571	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VSSSQVAPAPRRRSSRISKAIMLAVKSVDPSRAPYREEVTTGSISCHGCTYKMRHEPRPGDMVVLDTGLGS
Ga0066687_108455841	3300005454	Soil	MSSSQVAPAPTRRSSRISKPIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGEMVVLDTGLGSTGHSGFPSMARVKSIQKLNTSNDPTYN
Ga0070704_1005380891	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VSSNQVANVPKRRSSRISKAIMLAVKSVDASHAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVEL
Ga0066903_1056113921	3300005764	Tropical Forest Soil	VSSNQIANASTRRSSRISKAMMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDKGSGSTGHFGFPSRARVKSIQRLN
Ga0070766_110230971	3300005921	Soil	VSSNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTCKMRREPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIWGISS
Ga0066790_103892641	3300005995	Soil	VSSNQIANVAKRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRSGDMVVLDTGLSSTGHSGFPSLARVKSIQRLNTSND
Ga0070712_1004058811	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSSNQVANAPTRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRREPRPGDIVVLDTGS
Ga0075426_103984161	3300006903	Populus Rhizosphere	VSSNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRREPGPGDIVVLDTGTLGSTGHSGFPSRARVKSIQKVNSPNDPTYNVGVELEIAGNIWGIS
Ga0075424_1018006192	3300006904	Populus Rhizosphere	VSFNQVGNVAKRRSSRISKAITLAVQSVDASRAPYREEVATCSISCHGCTYKMRHEPGPGDIVVLDTGLVSTGHSGFPSRARVKSIQRLDSPNDPMYNVGVELEIAGNIWGISSPP
Ga0105237_127587661	3300009545	Corn Rhizosphere	VSSNQVANVPKRRSSRISKAIMLAVKSVDASHAPYREEVTTGSISCHGCTYKMRHEPRPGDMVVLDTGLGSTGHSGFPSMARV
Ga0126380_110219071	3300010043	Tropical Forest Soil	VSSNQVANAPTRRSSRISKAIMLAVQNVDASRVPYREEVTTGSISCHGCTYKMRHEPRPGDVVVLDTGSGSTSRLGFPSRARVKSIQRLNTFSNPTYNVGV
Ga0126380_118766071	3300010043	Tropical Forest Soil	VSSNQVANASNRRSSRISKAIMLAVQSVGPSRTPYREEVTTGSISCHGCTYKMRREPRPGDIVVLDTGSGS
Ga0126373_114384932	3300010048	Tropical Forest Soil	VSSNQIANASTRRSSRISKAMMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDK
Ga0126370_111945232	3300010358	Tropical Forest Soil	VSANYAANAPARRSSRISKAMMLAVQSVDASRPPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGAGSTGHLGFPSRARVK
Ga0126376_110513381	3300010359	Tropical Forest Soil	VSSNQVANAPNRRSSRISKAIMLAVQSGDASRAPYREEVTTVSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRPNTTNDPTYNVGVE
Ga0126376_120391621	3300010359	Tropical Forest Soil	VSSNQVANAPKRRSPRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPHPGDIVVLDTGSGSTGHFGFPS
Ga0126372_130878911	3300010360	Tropical Forest Soil	VSSNQVANAPTRRSSRITKAIMLAVQSVDASRVPYREEVTTGSISCHGCTYKMRHEPRPGDVVVLDTGAGSAGHLGFPSRARVKSIQRLNTFSNPTYNVGVELEIAGNIWGISSPPTDWFPRQSGHEVESAS
Ga0126378_107301181	3300010361	Tropical Forest Soil	VSFNQVATAVANAPKRRSSRISKAIMLAVQSVDPYPALSYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFPSRARVKSIQR
Ga0126378_116488412	3300010361	Tropical Forest Soil	VSSNQIANASTRRSSRISKAMMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDKGSGSTGHFGFPSRARVKSIQRLNT
Ga0126377_104830971	3300010362	Tropical Forest Soil	VSASQVAPMRQRRSSRISKAIMLAVKSVDTSRAPYREEVTTGSISCHGCTYKMRHEPRPGEMVILDSGLGSTGHSGFPSMARVKS
Ga0126377_124058491	3300010362	Tropical Forest Soil	VSSNQVANAPNRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTP
Ga0126379_101778621	3300010366	Tropical Forest Soil	MLAVQSVDASRVPYREEVTTGSISCHGCTYKMRHEPRPGDVVVLDTGAGSAGHLGFPSRARVKSIQRLNTFSNPTYNVGVELEIAGNIWGISSPPAD
Ga0126379_105937772	3300010366	Tropical Forest Soil	VSYKQVANAPKRRSSRVDKAIMLVVQGVDASREPYREEVTTGSISCHGCAYQMRHEVRAGDLVLLNSGQGAKGHSEFPRRARVKSIEKLNGP
Ga0126379_112583091	3300010366	Tropical Forest Soil	VLSNQIANAPTRRSSRISKAMMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTWSGSIGHSGFPSR
Ga0136449_1041637141	3300010379	Peatlands Soil	VSANQLSNAPIRRSSRISKAIMLAVQSVDDSRAPYREEVTTSSISCHGCTYKMRHEPHLGDIVVLDTGRGSAGHSGFPVRARVKSRQRLNTANDPTYNVGVELEI
Ga0126383_117950752	3300010398	Tropical Forest Soil	VSYKQVANAPKRRSSRVDKAIMLVVQGVDASREPYREEVTTGSISCHGCAYQMRHEVRAGDLVLLNSGQGAKGHSEFPRRARVKSIEKLNGPNDRTY
Ga0150983_117039211	3300011120	Forest Soil	VSSNQIANAPKRRSSRVDKAIMLVVQGVGASREPYREEVKTASISCHGCAYQMRHEVRPGDIVVLNSGHSESPRRARVKSIQ
Ga0137392_103125211	3300011269	Vadose Zone Soil	VSSNQIANAPKRRSSRVDKAIMLVVQGVGASREPYREEVKTGSISCHGCVYQMRHEVRPGDIVVLNSGHSESPRRARVK
Ga0137377_113108602	3300012211	Vadose Zone Soil	VLSNQVANAPKRRSSRISKAIMLAVQSVDPSRASYREEVTTGSISCHGCTYKMRYEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQ
Ga0137360_108518741	3300012361	Vadose Zone Soil	VSSNQVANAPTRRSSRISKAIMLAVQSVDASRAPNREEVTTGSISCHGCTYKMRREPRPGDIVVLDTGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELESAGNILGISSPPADGATR
Ga0137361_110836372	3300012362	Vadose Zone Soil	VSSNQVANAPTRRSSRISKAIMLAVQSVDASRAPNREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELE
Ga0137395_106796741	3300012917	Vadose Zone Soil	VSSNQIANAPKRRSSRVDKAIMLVVQGVGASREPYREEVKTGSISCHGCAYQMRHEVRPGDIVVLNSGHS
Ga0137413_105721092	3300012924	Vadose Zone Soil	VSSNQVANAPTRRSSRISKAIMLAVQSVDASRSPNREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVEL
Ga0126369_130666731	3300012971	Tropical Forest Soil	VPSNQFANAPKRRSSRISKAIMLAVQSVDVSRAPYREEVTTGSISCLGCTYKMRREPRPGDIVVLDTGSRSTGHSGFPSRAR
Ga0157375_135642352	3300013308	Miscanthus Rhizosphere	VSSNQVANVPKRRSSRISKAIMLAVKSVDASHAPYREEVTTGSISCHGCTYKMRHEPRPGDMVVLDTGLGSTGHSGFPSMARVK
Ga0167668_10269491	3300015193	Glacier Forefield Soil	VLSNQVANVPKRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRSGDMVVLDTGLCSTGHSGFPSLARVKSIQRL
Ga0132257_1030828441	3300015373	Arabidopsis Rhizosphere	VLSNQVANAPQRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPGPGDIVVLDTGLGSRGRSGFPSRARVKSIQRLNPPSDPAYNVGVELEIAGNIWGISSPPPDWFPRQSGNLVESASHGQ
Ga0182036_112456811	3300016270	Soil	VLSNQVANAPKRRSSRISKAVMLAVQSVDGSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFPSRARVKSIQRLN
Ga0182036_117620052	3300016270	Soil	VSSNQVANAPKRRSSRISKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKVRHEPHPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIWGISSPP
Ga0182041_104502252	3300016294	Soil	VSFNQVATAVANAPKRRSSRISKAIMLAVQSVDPYPALSYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFP
Ga0182041_113669981	3300016294	Soil	VSSNQVAHAPIRRSSRISKAIVLAVQSIDASRAPYREEVTTGSISCHGCTYRVRHEPRPGEIVVLDAGSGSTSHSGFPSRARVK
Ga0182041_115460341	3300016294	Soil	VSYNQVANAPKRRSSRISKGIMLAVQSVDTSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTWSDSTGQSGFPSRARVKSIQRLNTPNDPTYNVGVELE
Ga0182033_109777451	3300016319	Soil	VSFNQVATAVANAPKRRSSRISKAIMLAVQSVDPYPELSYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFPSRARVKSIQRLNTPNDPMYNVGV
Ga0182033_115250231	3300016319	Soil	VASNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIIVLDMGSGSTGHSGFPSRARVKTIQRLNTPYDPTYN
Ga0182035_120613001	3300016341	Soil	VSSNQVAHAPIRRSSRISKAIVLAVQSIDASRAPYREEVTTGSISCHGCTYRVRHEPRPGEIVVLDAGSGSTSHSGFPSRARV
Ga0182032_110924471	3300016357	Soil	VSSNQIANAPTRRSSRISKAMMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHFGFPSRARVKSIQRLNTPNAPTYNVGVELEIAGNIWGISS
Ga0182037_109585202	3300016404	Soil	VLSNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKVRREPHPGDIVVLDTGSGSIGHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIWGISSPP
Ga0182037_117808752	3300016404	Soil	VSSNQVANAPTRRSSRISKAIMLAVQSVDVSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIIVLDMGAGSTGRSGFPSRARVKSIQ
Ga0182037_119980631	3300016404	Soil	VSFNQVATAVANAPKRRSSRISKAIMLAVQSVDPYPALSYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFPSRAR
Ga0182038_108453131	3300016445	Soil	VSSNQIANAPTRRSSRISKAMMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGH
Ga0182038_112860652	3300016445	Soil	VSSIPVAHATKRRSSRIPKAIMLAVQSVDNSRAPYREEVTTGSISCHGCTYKVRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQKLNTPNDPTYNVGVELEIAGNIWGISSPPA
Ga0182038_121635032	3300016445	Soil	VASNQIANAPKRRSSRISKAIMLAEQSVDASRAPYRDEVTTGSISCHGCTYKMRHEPRPGDIIVLDMGSGSTGHSGFP
Ga0187814_104346461	3300017932	Freshwater Sediment	VSSNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMTHEPRPGEIMVLDTGSGSTGHSGFPSRARVKSILRLNTPNDPTYNVGVELEIAG
Ga0187785_100876752	3300017947	Tropical Peatland	VSSTQVAPVAKRRSSRISKAIMLAVKSVDGSRAPYREEVTTGSISCHGCTYKMRHEPRPGELVILDSG
Ga0187778_112497861	3300017961	Tropical Peatland	VSSTQVANAAKRRSSRISKSIMLAVQSVDVSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDAGSGSTGHAGFPSRARVKSIQRLNTPNDPTYNVGVE
Ga0187783_101153251	3300017970	Tropical Peatland	VSSSQVANASKRRSSRISKAIMLAVQSVDASRAPYREEVTTTSISCHGCTYKMRHEPRPGDVMVLDTGSGSTGHPGFPSRARVKSIQMLNTPNHPTYNVGVELEIAGNIWGIPSPPAD
Ga0187783_104359412	3300017970	Tropical Peatland	VSSNQVAIASKRRSSRISKAIMLAVQSVDAAYAPYREEVTTGSISCHGCTYKIRHEPHLGDIVVLDTGRNSAGHSGLRVRA
Ga0187783_107669032	3300017970	Tropical Peatland	VSSNPVANAPKRRSSRIPKAVMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHAGFPSRARVKSIQRLNTLNEPTYNV
Ga0187823_100822631	3300017993	Freshwater Sediment	VSSNQVANAAKRRSSRISKPIVLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDAGSGSTGHAGFPSRARVKSIQRLN
Ga0187805_100021909	3300018007	Freshwater Sediment	VSSNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGLRSTGHSGFP
Ga0179592_104053401	3300020199	Vadose Zone Soil	VSSNQVANAPTRRSSRISKAIMLAVQSVDASRAPNREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHSGFPSRAR
Ga0210403_114699601	3300020580	Soil	VSSNQIANAPKRRSSRVDKAIMLVVQGVGASREPYREEVKTGSISCHGCAYQMRHEVRPGDIVVLNSGYSESPRRARVKSIQKLNAPNNPTYNVGVELEIAGNIWGIASPPEDWFAKQSVKQ
Ga0210401_113874531	3300020583	Soil	VSTHPVSYGQKRRSSRIDKAIMLAVQGVDASRAPYREEVTTGTISCHGCTYQMQHQVVPGDIVVLNSAQGAKSYS
Ga0210408_104196991	3300021178	Soil	VSPNQVANAPKRRSSRIDKAIMLAVQGVDASRAPYREEVTTGSISCHGCTYKMKHEVRPGDIVVLDTGQGSKGHSEF
Ga0210396_104136142	3300021180	Soil	VSTHPVSYGQKRRSSRIDKAIMLAVQGVDASRAPYREEVTTGTISCHGCTYQMQHQVVPGDIVVLNSAQGAKSYSEFPRRARVKSIQKLSAPNDQTYTVGVELEFAGNIWGIPSPPEDWITFQ
Ga0210402_107400461	3300021478	Soil	VSSTQVAPASKRRSSRIPKAIMLAVKSVDTSRAPYREEVTTGSISCHGCTYRMRHEPRPGEMVVLDT
Ga0126371_131543182	3300021560	Tropical Forest Soil	VSSNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRREPCPGDVVVLDTGSGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVEL
Ga0208078_10546602	3300025544	Arctic Peat Soil	VSCNQVANVPKRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRSGDIVVLDTGLCSTGHSGFPSLARVKSIQRLNNSNDPTYNVGVELEIAGNIWGISSPP
Ga0207692_105757002	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VSSSQVAPAPKRRSSRISKAIMLAVKSVDTSRAPYREEVTTDSISCHGCTYKMRHEPRPGEMVVLDTGFSTGHSGFPSMAQVKSIQRINTSNDPAYNVGVEF
Ga0207710_104221001	3300025900	Switchgrass Rhizosphere	VSSNQVANVPKRRSSRISKAIMLAVKSVDASHAPYREEVTTGSISCHGCTYKMRHEPRPGDMVVLDTGLGSTGHSGFPSMARVKSIQRLNTSNDPTYNVGVELE
Ga0207699_101779681	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSSSQVAPAPKRRSSRISKAIMLAVKSVDTSRAPYREEVTTDSISCHGCTYKMRHEPRPGEMVVLDTGFST
Ga0207699_103136522	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSSNQVASAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDMVVLDTGLGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELE
Ga0207671_115372412	3300025914	Corn Rhizosphere	VSSNQVANVPKRRSSRISKAIMLAVKSVDASHAPYREEVTTGSISCHGCTYKMRHEPRPGDMVVLDTGLGSTGHSGFPSMARVKSI
Ga0209871_10352531	3300026217	Permafrost Soil	VSTSQVANVAKRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRSGDMVVLDTGLSSTGHSGFPSLARVK
Ga0209350_11042412	3300026277	Grasslands Soil	VSSNQVANAPKRRSSRISKAIMLAVQSVDPSRASYREEVTTGSISCHGCTYKMRYEPRPGDIVVLDTGSGSTGHSGFPSRAWVKSI
Ga0209839_102872221	3300026294	Soil	VSTSQVANVAKRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRSGDMVVLDTGLSS
Ga0209055_10226311	3300026309	Soil	VSSNQVANAPKRRSSRISKAIMLAVQSVDPSRASYREEVTTGSISCHGCTYKMRYEPRPGDIVVLDTGSGSTGHSGFPSRAWVKSIQRLNTPNDPTYNV
Ga0257173_10427621	3300026360	Soil	VSSNQVANAPTRRSSRISKAIMLAVQSVDASRAPNREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIWGISSPPAD
Ga0209378_11573102	3300026528	Soil	VSSNQVANAPKRRSSRISKAIMLAVQSVDPSRASYREEVTTGSISCHGCTYKMRYEPRPGDIVVLDTGSGSTGHSGFPSRAWVKSIQRLNTPNDPTYNVGVELEIAGNIWGISSPPADWLARR
Ga0179587_104635891	3300026557	Vadose Zone Soil	VSSNQVANAPTRRSSRISKAIMLAVQSVDASRAPNREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSTGHSGFPCRARVKSIQKLNTPNNP
Ga0207802_10163131	3300026847	Tropical Forest Soil	VSSNPVANAPKRRSSRIPKAIMLAVQSVDESRAPYREEVTTGSISCHGCTYKVRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVE
Ga0207727_1070801	3300026854	Tropical Forest Soil	VSSNQVAHAPIRRSSRISKAIVLAVQSIDASRAPHREEVTTGSISCHGCTYRVRHEPRPGEIVVLDAGSGSTGHSGFPSRARVKWVQK
Ga0207758_10046131	3300026895	Tropical Forest Soil	VSSNQVANAPQRRSSRISKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKVRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGV
Ga0207788_10156281	3300026898	Tropical Forest Soil	VSSNQVANAPQRRSSRISKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTSHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIW
Ga0207860_10401861	3300026921	Tropical Forest Soil	VSSNQVANAPQRRSSRISKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTSH
Ga0207824_10077422	3300026990	Tropical Forest Soil	VSSNQVANAPKRRSSRIPKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTSHS
Ga0207803_10016291	3300027000	Tropical Forest Soil	VSSNQVAHAPIRRSSRISKAIVLAVQSIDASRAPHREEVTTGSISCHGCTYRVRHEPRPGEIVVLDAG
Ga0207803_10254172	3300027000	Tropical Forest Soil	VSSNQVANAPQRRSSRISKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLD
Ga0207819_10017381	3300027024	Tropical Forest Soil	VSSNQVAHAPIRRSSRISKAIVLAVQSIDASRAPHREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTSHSGFPSRARVKWVQKINTVNDPTAYNVGVELEIAGNIWGIS
Ga0209325_10457461	3300027050	Forest Soil	VSSSQVAYAPKRRSSRISKAIMLAVQSVDASRAPHREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGATRH
Ga0209731_10718911	3300027326	Forest Soil	VSPNQVANASKRRSSRVDKAIVLVVQGIDAAREPYREEVTTGSISCHGCAYQMRHEVRAGDVVLLNSGQGAKGHS
Ga0209622_10212172	3300027502	Forest Soil	VSTSQVAHAPKRRSSRISKAIMLAVQSVDASRAPHREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGATR
Ga0209117_10292233	3300027645	Forest Soil	VLSNQVANVPKRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRSGDMVVLD
Ga0222749_100975031	3300029636	Soil	VLSNQVANVPKRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGLGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNLWGIS
Ga0073994_100390151	3300030991	Soil	VSSNQVANAPKRRSSRISKAIMLAVKSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTSNDPTYNVGVELEIAG
Ga0170818_1131561301	3300031474	Forest Soil	VSPNQVANSSKRRSSRVDKTIVLVVQGLDAARAPFREEVTTGSISCHGCACQMRHEVRPGDVVLLNSGQGAKGQSEFPRRARVKSIQKLNGLKDPTYKVGVELETAGNIWGIASPPDDWLPLQSGKLLERANDGREFQVIARTEPQK
Ga0318541_104505612	3300031545	Soil	VSFNQVATAVANAPKRRSSRISKAIMLAVQSVDPYPALSYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFPSRARVKSIQRLN
Ga0318538_105377271	3300031546	Soil	VLSNQIANAPTRRSSRISKAMMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTPNDTTYNVGVELEIAGNI
Ga0318542_101874931	3300031668	Soil	VSSNQIANAPTRRSSRISKAMMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHFGFPSRARVKSIQRLNTPNAPT
Ga0307474_116073581	3300031718	Hardwood Forest Soil	VSSSQVANAPKRRSSRISKAIMLAVQSVDASRAPNREEVTTGSISCHGCTYKMRHEPRPGDIVVLDMGSGST
Ga0306917_111040391	3300031719	Soil	VASNQIANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIIVLDMGSGSTGHSGFPSRARVKTIQRLNTPYDPTYNVGVELEIAGNIWGI
Ga0306918_115323521	3300031744	Soil	VSANQVANAAKRRSSRISKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKVRHEPHPGDIVVLDTGSGST
Ga0307477_104741292	3300031753	Hardwood Forest Soil	VSSNQVANAPKRRSSRISKTIMLAVQSVDASRASYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGLGSTGHSGFPSRARV
Ga0307475_107239511	3300031754	Hardwood Forest Soil	VSSNQVENAPIRRSSRISKAIMLAVQSVDASRAPNREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIWGISSP
Ga0307475_111378111	3300031754	Hardwood Forest Soil	VSPNQVANAPKRRSSRIDKAIMLAVQGVDASRAPYREEVTTGSISCHGCTYKMKHEVRPGDIVVLDTGQGSKGHSEFPSRARVKSIQKLNTPNEPTYNV
Ga0318550_105677831	3300031797	Soil	VSANQVANAAKRRSSRISKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFPSRARVK
Ga0307473_103054952	3300031820	Hardwood Forest Soil	VSSNQVANAPTRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRREPRPGDIVVLDTGSGSPGHFGFPTRARVKS
Ga0310917_105948692	3300031833	Soil	VLSNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKVRREPHPGDIVVLDTGSGSIGHSGFP
Ga0306919_109526331	3300031879	Soil	VSANQVANAAKRRSSRISKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKVRHEPHPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTPNDPMYNVGVELEIAGNIWG
Ga0306925_116224221	3300031890	Soil	VSYNQVANAPKRRSSRISKGIMLAVQSVDTSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTWSDSTGQSGFPSRA
Ga0318520_103723031	3300031897	Soil	VSSNQIANAPTRRSSRISKAMMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGS
Ga0306921_124830011	3300031912	Soil	VSSNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKVRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIWGISS
Ga0310916_108229061	3300031942	Soil	MGEWEGPVSFNQVATAVANAPKRRSSRISKAIMLAVQSVDPYPALSYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIWG
Ga0310916_115828751	3300031942	Soil	VSSNPVANAPQRRSSRISKAIMLAVQSVDPSRAPYREEVTTGSISCHGCTYKVRHEPHPGDIVVLDTGSGSTGHSGFPSRARVKS
Ga0310913_105558281	3300031945	Soil	VLSNQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKVRREPHPGDIVVLDTGSGSIGHSGFPSRARVKSIQRLNTPNDPTYNVGVEL
Ga0310913_107023751	3300031945	Soil	VSFNQVATAVANAPKRRSSRISKAIMLAVQSVDPYPALSYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSRSTGHSGFPSRARVKSIQRLNTPNDPMYN
Ga0310913_111067951	3300031945	Soil	VSSNQVAHAPIRRSSRISKAIVLAVQSIDASRAPYREEVTTGSISCHGCTYRVRHEPRPGEIVVLDAGSGSTSHSGFPSRARVKS
Ga0306926_116420312	3300031954	Soil	LSNQVANAPKRRSSRISKAVMLAVQSVDGSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQRLNTPNDTTYNVGVE
Ga0306922_101156625	3300032001	Soil	MLAVQSVDASRAPYREEVTTGSISCHGCTYKVRREPHPGDIVVLDTGSGSIGHSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIWGIS
Ga0306922_121262481	3300032001	Soil	VSSIPVAHATKRRSSRIPKAIMLAVQSVDNSRAPYREEVTTGSISCHGCTYKVRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQKLNTPNDPTYNVG
Ga0310911_105067832	3300032035	Soil	VSSSQVANAPKRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCAYKVRHEPRPGDIVVLDTGSGSTGHTGFPSRAR
Ga0318533_112192961	3300032059	Soil	VSSNQVAHAPIRRSSRISKAIVLAVQSIDASRAPYREEVTTGSISCHGCTYRVRHEPRPGEIVVLDAGSGSTSHSGFPSRARVKSIQKINTLNDPTTYNVGVELEIAGNI
Ga0318533_112310682	3300032059	Soil	VSSIPVAHATKRRSSRIPKAIMLAVQSVDNSRAPYREEVTTGSISCHGCTYKVRHEPRPGDIVVLDTGSGSTGHSGFPSRARVKSIQKLNTPNDPTYNVGVELE
Ga0318540_101610052	3300032094	Soil	VSSNQVANAPKRRSSRISKGIMLAVQSVDASRAPYREEVTTGSISCHGCTYRMRHEPRPGDIVVLDTWSDSTGQSGFPSRARVKSI
Ga0306920_1015367052	3300032261	Soil	VSSNQLANAPTRRSSRISKAIMLAVQSVDASRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTGSGSTGHFGFQQIGFPGNQAIQ
Ga0310914_107245691	3300033289	Soil	VSYNQVANAPKRRSSRISKGIMLAVQSVDTSRAPYREEVTTGSISCHGCTYKMRHEPRPGDIVVLDTWSDSTGQSGFPSRARVKSIQRLNTPNDPTYNVGVELEIAGNIWGISS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060221

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences