Metagenome / Metatranscriptome Family F060207

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060207
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	92 residues
Representative Sequence	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIGTVAPRDT
Number of Associated Samples	104
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.94 %
% of genes near scaffold ends (potentially truncated)	25.56 %
% of genes from short scaffolds (< 2000 bps)	82.71 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.226 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.060 % of family members)
Environment Ontology (ENVO)	Unclassified (21.805 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.902 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.17% β-sheet: 17.39% Coil/Unstructured: 70.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF08881	CVNH	9.02
PF06210	DUF1003	6.02
PF01339	CheB_methylest	1.50
PF07592	DDE_Tnp_ISAZ013	1.50
PF00296	Bac_luciferase	1.50
PF00034	Cytochrom_C	1.50
PF03705	CheR_N	1.50
PF00702	Hydrolase	1.50
PF13340	DUF4096	0.75
PF07813	LTXXQ	0.75
PF04392	ABC_sub_bind	0.75
PF03006	HlyIII	0.75
PF00872	Transposase_mut	0.75
PF05494	MlaC	0.75
PF02738	MoCoBD_1	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG4420	Uncharacterized membrane protein	Function unknown [S]	6.02
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	3.01
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	3.01
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.01
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.50
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.75
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.75
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.75
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.23 %
Unclassified	root	N/A	9.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.23 %
Unclassified	root	N/A	9.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.23 %
Unclassified	root	N/A	9.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.95 %
Unclassified	root	N/A	9.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	78.20 %
Unclassified	root	N/A	9.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	59.40 %
Unclassified	root	N/A	9.77 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.40 %
Unclassified	root	N/A	9.77 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	4.51 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.01 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.40 %
Unclassified	root	N/A	9.77 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4.51 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	3.01 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.40 %
Unclassified	root	N/A	9.77 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4.51 %
Acidisphaera rubrifaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	3.01 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10020063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1415	Open in IMG/M
3300001867\|JGI12627J18819_10395621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300002245\|JGIcombinedJ26739_100056186	All Organisms → cellular organisms → Bacteria → Proteobacteria	3595	Open in IMG/M
3300002245\|JGIcombinedJ26739_100164473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2098	Open in IMG/M
3300002245\|JGIcombinedJ26739_101360893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300002675\|Ga0005473J37261_109268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300002677\|Ga0005475J37263_105593	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300002681\|Ga0005471J37259_105819	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300004103\|Ga0058903_1533177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	649	Open in IMG/M
3300004152\|Ga0062386_100077248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2538	Open in IMG/M
3300004152\|Ga0062386_100619601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	885	Open in IMG/M
3300005166\|Ga0066674_10457489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300005174\|Ga0066680_10161829	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300005177\|Ga0066690_10143557	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300005184\|Ga0066671_10818316	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005437\|Ga0070710_10828022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300005445\|Ga0070708_101051300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300005467\|Ga0070706_102121596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	508	Open in IMG/M
3300005468\|Ga0070707_100645962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1021	Open in IMG/M
3300005471\|Ga0070698_100477291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1184	Open in IMG/M
3300005471\|Ga0070698_101388210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	653	Open in IMG/M
3300005518\|Ga0070699_101043881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300005536\|Ga0070697_101105112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	706	Open in IMG/M
3300005555\|Ga0066692_10270682	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005559\|Ga0066700_10159203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1536	Open in IMG/M
3300005561\|Ga0066699_10083866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2062	Open in IMG/M
3300005574\|Ga0066694_10291784	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005598\|Ga0066706_10554806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300005598\|Ga0066706_11306940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300005921\|Ga0070766_10089026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1810	Open in IMG/M
3300006050\|Ga0075028_100274200	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300006175\|Ga0070712_100839504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	790	Open in IMG/M
3300006796\|Ga0066665_10256006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1388	Open in IMG/M
3300006797\|Ga0066659_11170169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300006871\|Ga0075434_100435177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1333	Open in IMG/M
3300006903\|Ga0075426_11181000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	580	Open in IMG/M
3300006904\|Ga0075424_101815857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300006954\|Ga0079219_10304614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300007255\|Ga0099791_10033450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2264	Open in IMG/M
3300007255\|Ga0099791_10417925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300007258\|Ga0099793_10101476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1332	Open in IMG/M
3300007258\|Ga0099793_10501758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300009012\|Ga0066710_100263188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2503	Open in IMG/M
3300009143\|Ga0099792_10208283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1116	Open in IMG/M
3300009143\|Ga0099792_10378072	Not Available	862	Open in IMG/M
3300011120\|Ga0150983_11715703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1134	Open in IMG/M
3300011120\|Ga0150983_12037181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300011120\|Ga0150983_14005866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300011120\|Ga0150983_14401325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300011120\|Ga0150983_14748194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300011120\|Ga0150983_15586999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300011120\|Ga0150983_15835415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300011269\|Ga0137392_10337399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1248	Open in IMG/M
3300011270\|Ga0137391_10439914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300011270\|Ga0137391_10745676	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300011271\|Ga0137393_10478183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M
3300012189\|Ga0137388_10815774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300012203\|Ga0137399_11324913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300012205\|Ga0137362_11084616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300012211\|Ga0137377_10349161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1416	Open in IMG/M
3300012359\|Ga0137385_10542313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300012361\|Ga0137360_10652223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300012362\|Ga0137361_10399521	Not Available	1262	Open in IMG/M
3300012362\|Ga0137361_11152971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300012363\|Ga0137390_10383512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1385	Open in IMG/M
3300012582\|Ga0137358_10104000	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300012683\|Ga0137398_10292049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1094	Open in IMG/M
3300012683\|Ga0137398_10390676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	946	Open in IMG/M
3300012685\|Ga0137397_10920445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300012918\|Ga0137396_10232458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1358	Open in IMG/M
3300012923\|Ga0137359_11530091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300012924\|Ga0137413_11728473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300012927\|Ga0137416_10968876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	759	Open in IMG/M
3300012944\|Ga0137410_10632441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	887	Open in IMG/M
3300012951\|Ga0164300_10910396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300012960\|Ga0164301_10936967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300012989\|Ga0164305_11888714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300015241\|Ga0137418_10002964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15569	Open in IMG/M
3300017654\|Ga0134069_1112291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	893	Open in IMG/M
3300018431\|Ga0066655_10854653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300018468\|Ga0066662_10055168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2560	Open in IMG/M
3300018482\|Ga0066669_10905670	Not Available	790	Open in IMG/M
3300020170\|Ga0179594_10013234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2356	Open in IMG/M
3300020199\|Ga0179592_10270264	Not Available	760	Open in IMG/M
3300020579\|Ga0210407_10701715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300020581\|Ga0210399_10042893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3625	Open in IMG/M
3300020581\|Ga0210399_11450021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300020583\|Ga0210401_10115910	Not Available	2513	Open in IMG/M
3300020583\|Ga0210401_10534188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1035	Open in IMG/M
3300020583\|Ga0210401_10664655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	903	Open in IMG/M
3300021170\|Ga0210400_10678015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	848	Open in IMG/M
3300021171\|Ga0210405_10055263	All Organisms → cellular organisms → Bacteria	3138	Open in IMG/M
3300021178\|Ga0210408_10077974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2596	Open in IMG/M
3300021178\|Ga0210408_10104501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2227	Open in IMG/M
3300021178\|Ga0210408_10233094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1466	Open in IMG/M
3300021178\|Ga0210408_10311137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	1256	Open in IMG/M
3300021178\|Ga0210408_10342277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1192	Open in IMG/M
3300021401\|Ga0210393_10274740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	1368	Open in IMG/M
3300021406\|Ga0210386_10472233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	1084	Open in IMG/M
3300021432\|Ga0210384_10853778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300021475\|Ga0210392_10339994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1084	Open in IMG/M
3300021559\|Ga0210409_10857221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300022533\|Ga0242662_10035524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1224	Open in IMG/M
3300025915\|Ga0207693_10841091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300025916\|Ga0207663_10644294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300026498\|Ga0257156_1049430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300026548\|Ga0209161_10185879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1167	Open in IMG/M
3300027174\|Ga0207948_1026938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300027548\|Ga0209523_1067621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300027583\|Ga0209527_1090814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300027603\|Ga0209331_1018186	Not Available	1819	Open in IMG/M
3300027610\|Ga0209528_1102729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300027635\|Ga0209625_1001477	All Organisms → cellular organisms → Bacteria → Proteobacteria	5513	Open in IMG/M
3300027651\|Ga0209217_1119192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300027678\|Ga0209011_1005781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4251	Open in IMG/M
3300027748\|Ga0209689_1275567	Not Available	666	Open in IMG/M
3300027824\|Ga0209040_10291573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300027889\|Ga0209380_10016148	All Organisms → cellular organisms → Bacteria → Proteobacteria	4255	Open in IMG/M
3300027903\|Ga0209488_10655600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300028047\|Ga0209526_10029373	All Organisms → cellular organisms → Bacteria → Proteobacteria	3865	Open in IMG/M
3300028047\|Ga0209526_10125418	Not Available	1803	Open in IMG/M
3300029636\|Ga0222749_10351504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300030950\|Ga0074034_11054248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300031231\|Ga0170824_105345489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300031708\|Ga0310686_117646338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	1013	Open in IMG/M
3300031753\|Ga0307477_10132478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1739	Open in IMG/M
3300031754\|Ga0307475_10338489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1209	Open in IMG/M
3300031820\|Ga0307473_11410353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.74%
Host-Associated	Host-Associated	2.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.74%
Aquatic	Environmental → Aquatic	3.01%
Plants	Host-Associated → Plants	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.74%
Freshwater	Environmental → Aquatic → Freshwater	2.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.26%
Sediment	Environmental → Aquatic → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.66%
Loam	Environmental → Terrestrial → Soil → Loam	30.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	20.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.01%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002675	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF122 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002677	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF124 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002681	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030950	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral N3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100200633	3300001545	Forest Soil	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRALISGLGRGHGIGAAAPRDAGAN*
JGI12627J18819_103956212	3300001867	Forest Soil	MLNTQHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISVLGRGRDIGAV
JGIcombinedJ26739_1000561861	3300002245	Forest Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGKPIAIEVKFAAAFDAQRRRLISGLGRGIGTAAPKGTSNANLGPGQRPAP*
JGIcombinedJ26739_1001644733	3300002245	Forest Soil	MLDIHYDESRPSRVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRTPDPNLSRPGLGPAFG*
JGIcombinedJ26739_1013608933	3300002245	Forest Soil	EHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRALISGLGRGHGIGAAAPRDAGAN*
Ga0005473J37261_1092681	3300002675	Forest Soil	TMLDIHHDESRPSRVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRTPDPNLSRPGLGPAFG*
Ga0005475J37263_1055931	3300002677	Forest Soil	GRVASRAESEETMLNIHHGEARPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFEAHRRGLISGLGRGRGVGAAASGTPDPT*
Ga0005471J37259_1058191	3300002681	Forest Soil	MLNIHHGEARPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFEAHRRGLISGLGRGRGVGAAASGTPDPT*
Ga0058903_15331771	3300004103	Forest Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGKPIAIEVKFAAAFDAQRRRLISGLGRGIGTAAPKGMSNANLGPGLRPAP*
Ga0062386_1000772482	3300004152	Bog Forest Soil	MPNTHHDDSRLSRVRVAFEDGALSFMLSKDATFEDLANRLDRLGERRYGRPISIEVKPAAASDAQQRRLVSGLDRRRIGTA*
Ga0062386_1006196011	3300004152	Bog Forest Soil	MLNIHPDQSRPSRVTVAFEDGALSFMLSKDATFEDLADRLDRLGERHHCKPVAIEVKLAVASDAQRRRLVSGLGRGIGIATLKGRPIQI*
Ga0066674_104574891	3300005166	Soil	MLNIHHNESRPSRVTVASEHSAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIVVKLAAAFDAHQRRLISGLGRGRGIGAAAPGDAHPT*
Ga0066680_101618291	3300005174	Soil	MLHIHHNESRPSRVTVAFEHSAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGRGVGARRPIQLS*
Ga0066690_101435572	3300005177	Soil	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRDAGAN*
Ga0066671_108183161	3300005184	Soil	MLNIHHDESRPSRVTVALEHGAISFMMSKNATFEDLADRLDRLDKRRHGKPIAIAVKLAAAFDAHRRGLISGLGRGRGIGAVAPGDARSNLAIASF
Ga0070710_108280222	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MQDIHHDESRASRVRVAFEVGALSFMMSKDATFEDLADRLRDLDERHHGKPIAIEVKLAASPDTQRRLVSGLGRSRGIGTAAPNRTPDPNLSRPGLGPAFG*
Ga0070708_1010513003	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLDIHHDESRPSRVRVAFEDGALSFMLSRDATFEDLADRLRDLTERHHGKPVAIQVNLAASPDPERRRFVSGLGRSLGIGTAAPNRTPDPNLGRPGLGPAFG*
Ga0070706_1021215961	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RSRVTVAFEDGALSFMLSKDATFEDLADRLDRLGERHHGKPVAIQVKLAAASDVQRRRLVSGLGHSIGTAAPRPKLGRHGGG*
Ga0070707_1006459622	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLNIEHEESWRSRVTVAFEDGALSFMLSKDATFEDLADRLDRLGERHHGKPVAIQVKLAAASDVQRRRLVSGLGHSIGTAAPRPKLGRHGGG*
Ga0070698_1004772912	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLDIHYDESRPSRVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRAPDPNLGRPGLGPAFG*
Ga0070698_1013882101	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPNIQHDESRPSRVTVAFEDGALSFMLSKDATFGDLADRLDRLGERHHGKPVAIEVKLAAASDAQRRRLVSGLGRGRGIGTA*
Ga0070699_1010438811	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLNIQHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLIPGLGRGRDIGAVAPRDARSNLAS*
Ga0070697_1011051121	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MQDIHHDESRPSRVRVAFEEGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDIQRRRLVSELGRSRGIGTAAPKRTPIQT*
Ga0066692_102706821	3300005555	Soil	MLNIHHDESRPSRVTVALEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRDAGAN*
Ga0066700_101592032	3300005559	Soil	MLNIHHNASRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGIGARRPIQLG*
Ga0066699_100838664	3300005561	Soil	MLNTQHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIGAVAPGDARSNLAIASFQASH
Ga0066694_102917842	3300005574	Soil	MLHIHDNESRPSRVTVAFEHSAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRDAGAN*
Ga0066706_105548062	3300005598	Soil	MLHIHHNESRPSRVTVAFEHSAISFMMSKDTTFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGIGARRPIQLG*
Ga0066706_113069401	3300005598	Soil	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFNAHRRRPILGLRRGRGIGAERPIQLS*
Ga0070766_100890263	3300005921	Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGMPIAIEVKFAAAFDAQRRRLISGLGRGIGTAAPKGTSNANLGPGQRPAP*
Ga0075028_1002742001	3300006050	Watersheds	MLDIHNDWSSPSRVTVTFADGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRAPDPNLGRPGLGPAFGWTDRRRFR*
Ga0070712_1008395041	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQDIHHDESRPNRVRVAFEEGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDTQRRRRVSGLGHSRGIGTAAPNRTPDPNLGRPT*
Ga0066665_102560061	3300006796	Soil	MLHIHHNESRPSRVTVAFEHSAISFMMSKDTTFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGRGVGARRPIQLS*
Ga0066659_111701691	3300006797	Soil	MLNIQHDELRPSCVTVAFEHGAISFMLSKDATFEDLAHRLERPGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGCGRGIGAGRPIQLS*
Ga0075434_1004351771	3300006871	Populus Rhizosphere	MLNTHNDRSSPSRVTVTFADGALSFVLSEEATFEDLADRLDRLGERHHGKPVAIEVKLATSPDVGRRRLLSGLGRGRGIGTAAPKGTPDPNIGRPISAI*
Ga0075426_111810001	3300006903	Populus Rhizosphere	MLNIQHDESRPSRVTVAFEHGALSFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIGAVAPETTDPT*
Ga0075424_1018158572	3300006904	Populus Rhizosphere	MLNIQHDESRPSRVTVAFEHGALSFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIAQSHRATPDPT*
Ga0079219_103046142	3300006954	Agricultural Soil	MLSLHPDQSRPSHARLVFADRALSFMLPKGTTFEDLADRLRDLQERHHGKPVAIEVNLATSPDVGRRRLLSGLGRDRGIGTAAPKKTLDPNTGRPISAI*
Ga0099791_100334503	3300007255	Vadose Zone Soil	MLNIHHDGSQPSRVTVAYEHDALSFMMSKDATFEDLAVRLDRLVKRRHGKPVAITVKLAAAFDAHRRRLISGLGRGIGTVAPREPDPI*
Ga0099791_104179251	3300007255	Vadose Zone Soil	MLNIHHDESRPRRVTVAFEHGAISFLMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRDAGAN*
Ga0099793_101014763	3300007258	Vadose Zone Soil	MLNIHHDESRPRRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIGAVAPGD
Ga0099793_105017582	3300007258	Vadose Zone Soil	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIG
Ga0066710_1002631883	3300009012	Grasslands Soil	MLHIHHNESRPSRVTVAFEHSAISFMMSKDTTFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGRGVGARRPIQLS
Ga0099792_102082831	3300009143	Vadose Zone Soil	MLNIHHDGSRPRRVTVAFEHGAISFMMSKDATFEDLADRLDRLDKRRHGKPVAIAVKPAAAFDAHRRGLISGLGRDAGAN*
Ga0099792_103780723	3300009143	Vadose Zone Soil	MLDIHHDESRPSRVRVAFKDGALSFMLSKGATFEDLADRLRDLDERHRGKPVAIEVKLAASPDAERRRFVSGLGRSLGIDTAAPKRAPDPNLGRPGLGPAFG*
Ga0150983_117157032	3300011120	Forest Soil	MLDIHHDESRPSRVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRTPDPNLSRPGLGPAFG*
Ga0150983_120371811	3300011120	Forest Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGMPIAIEVKFAAAFDAQRRRLISGLGRGVGTAAPKGTSNANLGPGQRPAP*
Ga0150983_130242761	3300011120	Forest Soil	MPDIYDESRPSRVTVAFEGRALSFMLSKDATFEDLADRLDRLRERHQGEPIAIEIRFAAALDTQRRRLISRLGRVIHTAAPTRDARRGLGSGADASSTN*
Ga0150983_140058661	3300011120	Forest Soil	MLNIYHDESRPSRVTVAFEDRALSFILSKDATFEDLADRLDRLGERHHGKPIAVEVKLAASPDTQRRRFVSGLGRSHGIGTAAPKRTPIQT*
Ga0150983_144013251	3300011120	Forest Soil	MLDIHYDESRPSRVRVAFEDGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDTQRRRFVSRLRRSRGIGTPAPNRAPDPNLGRPGLRPAFG*
Ga0150983_147481941	3300011120	Forest Soil	DYQYWRKRMLNIYHDESRPSRVTVAFEDSALSFMLSKDATFEDLADRLDRLGERHHGMPIAIEVKFAAASGAQRRPLFSGLGRGRGIGTAARQGRPMRT*
Ga0150983_155869992	3300011120	Forest Soil	MQDIHHDEARPSRVRVAFEEGALSFMLSKNATFEDLADRLRDLDERHHGKPVAIEVKLAASPDTQRRRLVSGLGRSRGIGIIAPNRTPDPNLGRPI*
Ga0150983_158354152	3300011120	Forest Soil	MLDLHHDESRPNRVRVAFADREFLFMLSNDATFEDLAGRLCDLDERHHGKPVAIEVKLAASPDARRRRLLSGLGRGIGAAAPKEMPDPSRGRPISAI*
Ga0137392_103373992	3300011269	Vadose Zone Soil	MLDIHHDESRPSRVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRAPDSNLGRPGLGPAFG*
Ga0137391_104399141	3300011270	Vadose Zone Soil	MLDIHHDESRPSRVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRTPDPNLGRPGLGPAFG*
Ga0137391_107456761	3300011270	Vadose Zone Soil	NIHHEESSSSRATVAFEHDAFSFMMSKDATFEDLAVRLDRLVKRRHGKPVAITVKLAAAFDAHRRRLISGLGRGIGTVAPREPDPI*
Ga0137393_104781832	3300011271	Vadose Zone Soil	MLDIHHDESRPSRVWVAFEDGALSFMLSRDATFEDLADRLRDLAERHHGKPVAIQVNLAASPDAERRRFVSGLGRSLGIGTAAPNRAPDPNLGRPGLGPAFG*
Ga0137388_108157741	3300012189	Vadose Zone Soil	MLDIHHDESRPSRVWVAFEDGALSFMLSRDATFEDLADRLRDLAERHHGKPVAIQVNLAASPDAERRRFVSGIGRSLGIGTAAPNRAPDSNLGRPGLGPAFG*
Ga0137399_113249132	3300012203	Vadose Zone Soil	YSEETMLDIHHDESRPSRVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRAPDPNLGRPGLGPAFG*
Ga0137362_110846161	3300012205	Vadose Zone Soil	MLNIYHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRDAGAN*
Ga0137377_103491611	3300012211	Vadose Zone Soil	MLNIHHDESRPSRVTVALEHGAISFTMSKNATFEDLADRLDRLGKRRHGKPIAIAVKLAAAFDGHRRRPISGLGCGRGIGAGRPI
Ga0137385_105423131	3300012359	Vadose Zone Soil	MLHIHHNESRPSRVTVAFEHSAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGIGARRPIQLG*
Ga0137360_106522232	3300012361	Vadose Zone Soil	MLNIYHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRDAGAN*
Ga0137361_103995213	3300012362	Vadose Zone Soil	MLNIHHDESRPRRVTVAFEHGAISFLMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRGAGAN*
Ga0137361_111529713	3300012362	Vadose Zone Soil	FSEETMLNIHNDGSSPSRVTVTFGDGALSFMLSRDATFEDLADRLRDLAERHHGKPVAIEVKLAASPDAERRRFVSGIGRSLGIGTAAPNRAPDSNLGRPGLGPAFG*
Ga0137390_103835123	3300012363	Vadose Zone Soil	MLDIHHDESRPSRVWVAFEDGALSFMLSRDATFEDLADRLRDLAERHHGKPVAIEVKLAASPDAERRRFVSGIGRSLGIGTAAPNRAPDSNLGRPGLGPAFG*
Ga0137358_101040004	3300012582	Vadose Zone Soil	MLNIHHDESRPSRVTVALEHGAISFTMSKNATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIGAVAPGDA*
Ga0137398_102920491	3300012683	Vadose Zone Soil	DGALSFMLSKGATFEDLADRLRDLDERHRGKPVAIEVKLAASPDAERRRFVSGLGRSLGIDTAAPKRAPDPNLGRPGLGPAFG*
Ga0137398_103906761	3300012683	Vadose Zone Soil	MLNIHHDGSQPSRVTVAFEHGALSFMMSKESTFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGGAAPRDAGAN*
Ga0137397_109204451	3300012685	Vadose Zone Soil	SRVRVAFKDGALSFMLSKGATFEDLADRLRDLDERHRGKPVAIEVKLAASPDAERRRFVSGLGRSLGIDTAAPKRAPDPNLGRPGLGPAFG*
Ga0137396_102324582	3300012918	Vadose Zone Soil	MLNIHHDESQPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRDAGAN*
Ga0137359_115300912	3300012923	Vadose Zone Soil	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGVG
Ga0137413_117284731	3300012924	Vadose Zone Soil	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLIPGLGRGRG
Ga0137416_109688762	3300012927	Vadose Zone Soil	MLNIHHDESRPSRVTVALEHGAISFMMSKNATFEYLADRLDRLDKRRHGKPVAIAVKPAAAFDAHRRGLISGLGRGRGIGAVAPGDARSNL
Ga0137410_106324411	3300012944	Vadose Zone Soil	DESRPRRVTVAFEHGAISFLMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRDAGAN*
Ga0164300_109103961	3300012951	Soil	MQDIHHDESRPSRVRVAFEEGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDTQRRRFVSRLRRSRGIGTP
Ga0164301_109369671	3300012960	Soil	MLNNYHDESRPSRVTVAFEDSALSFMLLKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLSRSLGIGTAAPNRTPDPNLSRPGLGPAFG*
Ga0164305_118887142	3300012989	Soil	MLDIHHDESRPSRVRVAFEDGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDTQRRRFVPRLRRSRGIGTPAPNRAP
Ga0137418_100029643	3300015241	Vadose Zone Soil	MLNIHHDESRPRRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGXXXXXXX
Ga0134069_11122913	3300017654	Grasslands Soil	MLNIQHDESRPSRVTVALEHGALSFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGIGARRPIQLG
Ga0066655_108546531	3300018431	Grasslands Soil	MLNIHHNASRPSRVTVAFEHSAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGIGARRPIQLG
Ga0066662_100551684	3300018468	Grasslands Soil	MLNIHHDESRPSRLTVALEHGAISFMMSKDATFEDLADRLDLLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGRGVGARRPIQLS
Ga0066669_109056701	3300018482	Grasslands Soil	SRPSRVTVAFEHSAISFMMSKDTTFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRPISGLGRGRGVGARRPIQLS
Ga0179594_100132344	3300020170	Vadose Zone Soil	MLNIHHDESRPRRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRDAGAN
Ga0179592_102702641	3300020199	Vadose Zone Soil	MLDIHHDESRPSRVRVAFKDGALSFMLSKGATFEDLADRLRDLDERHRGKPVAIEVKLAASPDAERRRFVSGLGRSLGIDTAAPKRAPDPNLGRPGLGPAFG
Ga0210407_107017151	3300020579	Soil	IHHDEPRPSRVRVAFEDGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAQRRRFVPRLRRSRGIGTPAPNRAPDPNLGRPGLRPAFG
Ga0210403_102905972	3300020580	Soil	MLDIYDESRPSRVTVAFEDRALSFMLSKDATYEDLADRLDRLRERHQGKPIAIEVRFAAALDAQRRRLISGLGRGIGTAAPTRDAQRELGSGADASSINLVSDQPALIRPN
Ga0210399_100428932	3300020581	Soil	MLNIHHGEARPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFEAHRRGLISGLGRGRGVGAAASGTPDPT
Ga0210399_114500211	3300020581	Soil	MLNIHRDEARPSRVTVAFEHGAISFMMSRDATFEDLADRLDRLGKRRHGKPVAIAVKLAAVFDAHRRELISGFGRGHGSGAAAPRET
Ga0210401_101159104	3300020583	Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGKPIAIEVKFAAAFDAQRRRLISGLGRGIGTRRTKGMSNANLGPGLRPAP
Ga0210401_105341884	3300020583	Soil	SRPNRVRVAFEEGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDTQRRRLVSGLGRSRGIGIAPPNRTPDPNLDHPT
Ga0210401_106646552	3300020583	Soil	MLNIHHGEARPSCVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGVGAV
Ga0210400_106780152	3300021170	Soil	MLDIHHDESRPSSVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRAPDPNLGRPGLGPAFG
Ga0210400_108703202	3300021170	Soil	DRALSFMLSKDATFEDLADRLDRLRERHQGKPIAIEVRFAAALDAQRRRLISGLGRGIGTAAPTRDAQRELGSGADASSINLVSDQPALIRPN
Ga0210405_100552633	3300021171	Soil	MQDIHHDESRPSRVRVAFEEGALSFMLSKDATFEDLADRLLRLGERHHAKPIAIEVKLAASPDTQRRRLVSRLGRRRGIGIAASNRTPDPNLGRPTKEVRG
Ga0210408_100779743	3300021178	Soil	MLDIHHDESRPSSVRVAFEDGALSFMLSKGATFEDLADRLHDLDKRHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRTPDPNLSRPGLGPAFG
Ga0210408_101045014	3300021178	Soil	MLNIHHDEARPSRVTVSFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAASDAHRRRLVSGLGRGRGIGAVEPGD
Ga0210408_102330942	3300021178	Soil	MQDIHHDESRPNRVRVAFEEGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDIQRRRLVSELGRSRGIGTAAPKRTPIQT
Ga0210408_103111372	3300021178	Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGKPIAIEVKFAAAFDAQRRRLISGLGRGIGTAAPKGTSNANLGPGLRPAP
Ga0210408_103422773	3300021178	Soil	MLNIHRDEARPSRVTVAFEHGAISFMMSRDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRELISGFGRGHGSGAAAPRET
Ga0210408_106819312	3300021178	Soil	MPDIYDESRPSRVTVAFEGRALSFMLSKDATFEDLADRLDRLRERHQGEPIAIEIRFAAALDTQRRRLISRLGRVIHTAAPTRDARRGLGSGADASSTN
Ga0210393_102747401	3300021401	Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGKPIAIEVKFAAAFDAQRRRLISGLGRGIGTAAPKGMSNANLGPGLRPAP
Ga0210386_104722331	3300021406	Soil	AFEDRALSFMLSKDATFGDLADRLDRRGEWHHGKPIAIEVKFAAAFDAQRRRLISGLGRGIGTAAPKGTSNANLGPGLRPAP
Ga0210384_103970103	3300021432	Soil	MLDIYDESRPSRVTVAFEDRALSFMLSKDATYEDLADRLDRLRERHQGKPIAIEVRFAAALDAQRRRLISGLGRGIGTAAPTRDAQRELGSGADASSINLVSDQPALI
Ga0210384_108537781	3300021432	Soil	DHQYSEETMQDIHHDESRPNRVRVAFEEGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDTQRRRLVSGLGRSRGIGIIAPNRTPDPNLGRPI
Ga0210392_103399941	3300021475	Soil	MLNIHHGEARPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFEAHRRGLISGLGRGRGVGAAASGTP
Ga0210409_108572211	3300021559	Soil	SRPNRVRVAFEEGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSELGRSLGIGTAPPNRTPDPNLSRPGLGPAFG
Ga0242662_100355243	3300022533	Soil	MLNIHHDEARPSCVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFEAHRRGLISGLGRGRGVGAAASGTPDPT
Ga0207693_108410911	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQDIHHDESRPNRVRVAFEEGALSFMLSKDATFEDLADRLRDLDERHHGKPVAIEVKLAASPDTQRRRRVSGLGHSRGIGTAAPNRTPDPNLGRPT
Ga0207663_106442941	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MQDIHHDESRPNRVRVAFEEGALSFMLSKDATFEDLADRLRDLDERHHGKPIAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRAPDPNLGRPGLGPAFG
Ga0257156_10494302	3300026498	Soil	MLNIHHDGSQPSRVTVAFEHGALSFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRRLISGLGRGHGIGAAAPRDAGAN
Ga0209161_101858793	3300026548	Soil	MLNIHNDGSSPGRVTVTFADGALSFMLSEDATFEDLADRLDRLGERHHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIGAVAPGDAR
Ga0207948_10269381	3300027174	Forest Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGKPIAIEVKFAAAFDAQRRRLISGLGRGVGTAAPKGTSNANLGPGQR
Ga0209523_10676212	3300027548	Forest Soil	MLNTQHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRDIGAVAPRDT
Ga0209527_10908141	3300027583	Forest Soil	MLNIHHDEPRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRALISGLGRGHGIGAAAPRDAGAN
Ga0209331_10181862	3300027603	Forest Soil	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIGTVAPRDT
Ga0209528_11027293	3300027610	Forest Soil	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRALISGLGRGHGIGAAAPRDAGAN
Ga0209625_10014775	3300027635	Forest Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGKPIAIEVKFAAAFDAQRRRLISGLGRGIGTAAPKGTSNANLGPGQRPAP
Ga0209217_11191921	3300027651	Forest Soil	MLNIHHDESQPSRVTVAFEHSALSFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRALISGLGRGHGIGAAAPRDAGAN
Ga0209011_10057814	3300027678	Forest Soil	MLNIHHNESRPSRVRVAFKDGALSFMFSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRALISGLGRGHGIGAAAPRDAGAN
Ga0209689_12755672	3300027748	Soil	MLNIHHNASRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRQASRLLSRSNLPPHSTHRRGLIPGLGRGRDIGAEGHLGPVTKQTRD
Ga0209040_102915731	3300027824	Bog Forest Soil	MLNIHPDQSRPSRVTVAFEDGALSFMLSKDATFEDLADRLDRLGERHHCKPVAIEVKLAVASDAQRRRLVSGLGRGIGIATLKGRPIQI
Ga0209380_100161481	3300027889	Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGMPIAIEVKFAAAFDAQRRRLISGLGRGVGTAAPKGTSNANLGPGQRPAP
Ga0209488_106556001	3300027903	Vadose Zone Soil	MLNIHHDESRPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGHGIGAAAPRDAGAN
Ga0209526_100293734	3300028047	Forest Soil	MLDIHYDESRPSRVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKPVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRTPDPNLSRPGLGPAFG
Ga0209526_101254182	3300028047	Forest Soil	MRNIHHDEARPSRVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIGTVAPRDT
Ga0222749_103515042	3300029636	Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFEDLADRLDRLRERHQGKPIAIEVRFAAALDAQRRRLISGLGRGIGTAAPTRDAQRELGSGADASSMN
Ga0074034_110542482	3300030950	Soil	MLDIHHDESRPSRVRVAFEDGALSFMLSKGATFEDLADRLRDLDERHHGKAVAIEVKLAASPDAERRRFVSGLGRSLGIGTAAPNRAPDPNLGRPGLGPAFG
Ga0170824_1053454891	3300031231	Forest Soil	MLNIHHDEARPSCVTVAFEHGAISFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGVGAAASGTPDPT
Ga0310686_1176463382	3300031708	Soil	MLNIYDESRPSRVTVAFEDRALSFMLSKDATFGDLADRLDRRGEWHHGNPIAIEVKFAAAFDAQRRRLISGPGRGIGTAAPKGTSNANLGPGQRPAP
Ga0307477_101324784	3300031753	Hardwood Forest Soil	MLNNHHDESRPSRVTVAFEDGARSFLLSKDATFEDLADRLDRLGERHHGKPVAIEVKLAAAFDAHRRRLVSGLGRGTGTAATKGSPIQT
Ga0307475_103384894	3300031754	Hardwood Forest Soil	MLNTHHDESRPSRVTVAFEDGVLSFMLSKDATFEDLADRLDRLGEPHHRKPVVIEVKLAAAFDAQRRRLVLGLGRGTGTAATKGSPIQT
Ga0307473_114103531	3300031820	Hardwood Forest Soil	MLKIQHYESRPSRVTVAFEHGALSFMMSKDATFEDLADRLDRLGKRRHGKPVAIAVKLAAAFDAHRRGLISGLGRGRGIGAVAPGDARSNLAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060207

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences