Metagenome / Metatranscriptome Family F060180

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060180
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	113 residues
Representative Sequence	MGLNHAVAGNPQTELRVQSNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALDLVTDLRVKIKASHNLLRVAKLLSEPARASMFSKVRDSLNDLEEVIASHLGVRMN
Number of Associated Samples	89
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.55 %
% of genes near scaffold ends (potentially truncated)	27.07 %
% of genes from short scaffolds (< 2000 bps)	72.18 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.744 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.068 % of family members)
Environment Ontology (ENVO)	Unclassified (33.083 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.135 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.37% β-sheet: 0.00% Coil/Unstructured: 48.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF12844	HTH_19	4.51
PF05163	DinB	4.51
PF13560	HTH_31	3.01
PF13545	HTH_Crp_2	2.26
PF07238	PilZ	2.26
PF08308	PEGA	2.26
PF02353	CMAS	1.50
PF00171	Aldedh	1.50
PF00881	Nitroreductase	1.50
PF13450	NAD_binding_8	1.50
PF07676	PD40	1.50
PF01381	HTH_3	1.50
PF02481	DNA_processg_A	1.50
PF02770	Acyl-CoA_dh_M	0.75
PF13495	Phage_int_SAM_4	0.75
PF00510	COX3	0.75
PF13229	Beta_helix	0.75
PF13086	AAA_11	0.75
PF13384	HTH_23	0.75
PF10067	DUF2306	0.75
PF06348	DUF1059	0.75
PF00144	Beta-lactamase	0.75
PF12779	WXXGXW	0.75
PF02371	Transposase_20	0.75
PF00561	Abhydrolase_1	0.75
PF08483	Obsolete Pfam Family	0.75
PF00486	Trans_reg_C	0.75
PF00535	Glycos_transf_2	0.75
PF13483	Lactamase_B_3	0.75
PF05717	TnpB_IS66	0.75
PF05593	RHS_repeat	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.51
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	3.01
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.50
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.50
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.50
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	1.50
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	1.50
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.50
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.75
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	0.75
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.75
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.75
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.75
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.75
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.74 %
Unclassified	root	N/A	2.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.74 %
Unclassified	root	N/A	2.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.74 %
Unclassified	root	N/A	2.26 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	83.46 %
Unclassified	root	N/A	2.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	72.18 %
Unclassified	root	N/A	2.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.18 %
Unclassified	root	N/A	2.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10129899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300002562\|JGI25382J37095_10015265	All Organisms → cellular organisms → Bacteria → Acidobacteria	2933	Open in IMG/M
3300002908\|JGI25382J43887_10016078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3916	Open in IMG/M
3300003351\|JGI26346J50198_1015469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300004091\|Ga0062387_100027751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2451	Open in IMG/M
3300004631\|Ga0058899_11862424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300005332\|Ga0066388_100106199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3289	Open in IMG/M
3300005341\|Ga0070691_10908968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300005439\|Ga0070711_101463894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300005447\|Ga0066689_10117067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1550	Open in IMG/M
3300005468\|Ga0070707_100452797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300005526\|Ga0073909_10020392	All Organisms → cellular organisms → Bacteria	2153	Open in IMG/M
3300005541\|Ga0070733_10112271	All Organisms → cellular organisms → Bacteria → Acidobacteria	1747	Open in IMG/M
3300005591\|Ga0070761_10262810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300005602\|Ga0070762_10174492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301	Open in IMG/M
3300005610\|Ga0070763_10256485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300006176\|Ga0070765_100024659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4568	Open in IMG/M
3300006804\|Ga0079221_10855983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300006806\|Ga0079220_10109737	All Organisms → cellular organisms → Bacteria → Acidobacteria	1448	Open in IMG/M
3300009038\|Ga0099829_10037429	All Organisms → cellular organisms → Bacteria → Acidobacteria	3508	Open in IMG/M
3300009038\|Ga0099829_10105354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2200	Open in IMG/M
3300009038\|Ga0099829_10208961	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300009038\|Ga0099829_10310313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1294	Open in IMG/M
3300009038\|Ga0099829_10622526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300009038\|Ga0099829_10929224	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300009088\|Ga0099830_10600584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300009088\|Ga0099830_10686840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300009088\|Ga0099830_10779411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300009088\|Ga0099830_10829489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300009088\|Ga0099830_11412546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300009089\|Ga0099828_10045472	All Organisms → cellular organisms → Bacteria	3619	Open in IMG/M
3300009089\|Ga0099828_10306636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1429	Open in IMG/M
3300009520\|Ga0116214_1111557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300010043\|Ga0126380_10287475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1162	Open in IMG/M
3300010154\|Ga0127503_10103051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300010358\|Ga0126370_11581329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300010360\|Ga0126372_13262955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300010396\|Ga0134126_10569899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300011120\|Ga0150983_11630633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300011120\|Ga0150983_12873731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300011120\|Ga0150983_14494319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300011120\|Ga0150983_16393828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300011269\|Ga0137392_10168560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1777	Open in IMG/M
3300011270\|Ga0137391_10925101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300011271\|Ga0137393_10482766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300011271\|Ga0137393_11027361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300011271\|Ga0137393_11263499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300012096\|Ga0137389_10007179	All Organisms → cellular organisms → Bacteria	7245	Open in IMG/M
3300012096\|Ga0137389_10207675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1633	Open in IMG/M
3300012096\|Ga0137389_10494487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300012096\|Ga0137389_11296568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300012189\|Ga0137388_10004430	All Organisms → cellular organisms → Bacteria	9214	Open in IMG/M
3300012189\|Ga0137388_10016813	All Organisms → cellular organisms → Bacteria → Acidobacteria	5381	Open in IMG/M
3300012189\|Ga0137388_10136016	All Organisms → cellular organisms → Bacteria → Acidobacteria	2159	Open in IMG/M
3300012189\|Ga0137388_11694239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012189\|Ga0137388_11714511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012206\|Ga0137380_10094385	All Organisms → cellular organisms → Bacteria → Proteobacteria	2734	Open in IMG/M
3300012931\|Ga0153915_10490516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1403	Open in IMG/M
3300012960\|Ga0164301_10062784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1975	Open in IMG/M
3300012986\|Ga0164304_10379324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300015193\|Ga0167668_1099729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300017936\|Ga0187821_10289777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300018012\|Ga0187810_10178148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300018468\|Ga0066662_10051062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2636	Open in IMG/M
3300020579\|Ga0210407_10001276	All Organisms → cellular organisms → Bacteria	24211	Open in IMG/M
3300020579\|Ga0210407_10026536	All Organisms → cellular organisms → Bacteria → Acidobacteria	4307	Open in IMG/M
3300020579\|Ga0210407_10372979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300020580\|Ga0210403_10403663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300020580\|Ga0210403_11250869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300020581\|Ga0210399_10610126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300021046\|Ga0215015_10336681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300021046\|Ga0215015_10440620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300021170\|Ga0210400_10000026	All Organisms → cellular organisms → Bacteria	275063	Open in IMG/M
3300021171\|Ga0210405_10007071	All Organisms → cellular organisms → Bacteria	9919	Open in IMG/M
3300021171\|Ga0210405_10258561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1378	Open in IMG/M
3300021401\|Ga0210393_10309338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300021407\|Ga0210383_10000024	All Organisms → cellular organisms → Bacteria	190173	Open in IMG/M
3300021477\|Ga0210398_11551212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300021559\|Ga0210409_10535269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300022508\|Ga0222728_1056080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300022724\|Ga0242665_10364481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300023677\|Ga0247543_101216	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300024178\|Ga0247694_1020537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300024186\|Ga0247688_1044405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300025922\|Ga0207646_10421295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300025922\|Ga0207646_10511802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300026296\|Ga0209235_1253944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300026298\|Ga0209236_1002141	All Organisms → cellular organisms → Bacteria	12066	Open in IMG/M
3300026467\|Ga0257154_1082193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300026551\|Ga0209648_10285588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1194	Open in IMG/M
3300027459\|Ga0207505_107737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300027565\|Ga0209219_1133735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300027698\|Ga0209446_1000759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7435	Open in IMG/M
3300027765\|Ga0209073_10157495	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300027821\|Ga0209811_10016042	All Organisms → cellular organisms → Bacteria → Acidobacteria	2423	Open in IMG/M
3300027846\|Ga0209180_10055689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2191	Open in IMG/M
3300027846\|Ga0209180_10144702	All Organisms → cellular organisms → Bacteria → Acidobacteria	1368	Open in IMG/M
3300027846\|Ga0209180_10193715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300027855\|Ga0209693_10213220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300027862\|Ga0209701_10235276	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300027862\|Ga0209701_10490900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300027867\|Ga0209167_10041343	All Organisms → cellular organisms → Bacteria → Acidobacteria	2243	Open in IMG/M
3300027875\|Ga0209283_10041493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2902	Open in IMG/M
3300027875\|Ga0209283_10064061	All Organisms → cellular organisms → Bacteria	2360	Open in IMG/M
3300027875\|Ga0209283_10310462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300027884\|Ga0209275_10364389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300028146\|Ga0247682_1097829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300028906\|Ga0308309_10018848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4515	Open in IMG/M
3300031057\|Ga0170834_103400176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300031474\|Ga0170818_103065592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1382	Open in IMG/M
3300031590\|Ga0307483_1029283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300031708\|Ga0310686_101656242	All Organisms → cellular organisms → Bacteria	8053	Open in IMG/M
3300031708\|Ga0310686_102265737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300031708\|Ga0310686_102423568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1778	Open in IMG/M
3300031708\|Ga0310686_109788566	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300031708\|Ga0310686_114054044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300031708\|Ga0310686_114779167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5838	Open in IMG/M
3300031716\|Ga0310813_10585683	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300031720\|Ga0307469_10014949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3995	Open in IMG/M
3300031720\|Ga0307469_11291427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300031720\|Ga0307469_11551976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300031820\|Ga0307473_10136294	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300031820\|Ga0307473_10387748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300031962\|Ga0307479_10002248	All Organisms → cellular organisms → Bacteria → Acidobacteria	17537	Open in IMG/M
3300031962\|Ga0307479_10002763	All Organisms → cellular organisms → Bacteria	15898	Open in IMG/M
3300031962\|Ga0307479_10024000	All Organisms → cellular organisms → Bacteria → Acidobacteria	5776	Open in IMG/M
3300032160\|Ga0311301_10324662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2437	Open in IMG/M
3300032180\|Ga0307471_100140213	All Organisms → cellular organisms → Bacteria → Acidobacteria	2301	Open in IMG/M
3300032515\|Ga0348332_10187226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300033480\|Ga0316620_12103749	Not Available	561	Open in IMG/M
3300033486\|Ga0316624_10219323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1486	Open in IMG/M
3300033513\|Ga0316628_101004336	Not Available	1107	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.74%
Aquatic	Environmental → Aquatic	5.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.98%
Freshwater	Environmental → Aquatic → Freshwater	5.26%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.44%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.26%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.01%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.02%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.01%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.50%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023677	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027459	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-A (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101298991	3300002558	Grasslands Soil	GSHHAVAGNPQTEWRVPGKPLQRDEYASDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVAKLLSEPARGSMVSRIRDSLNDLEESIASHLVVGTS*
JGI25382J37095_100152652	3300002562	Grasslands Soil	MLMGSHHAVAGNPQTEWRVPGKPLQRDEYASDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVAKLLSEPARGSMVSRIRDSLNDLEESIASHLVVGTS
JGI25382J43887_100160783	3300002908	Grasslands Soil	MGSHHAVAGNPQTEWRVPGKPLQRDEYASDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVAKLLSEPARGSMVSRIRDSLNDLEESIASHLVVGTS*
JGI26346J50198_10154691	3300003351	Bog Forest Soil	MANHAVWNPPTGLRHQSESLQRVEFALENDLENRIKNLDKLVDSVNSALGYESFSGKPHALDLMNDLRVKIKATHNMLRVAKLLSEPARESMLSRVRHSLNDLEGIVASNFGVEMN*
Ga0062387_1000277513	3300004091	Bog Forest Soil	MRSNHAMTGNPQRELGTQSQSLLRDESLLENDLENRIGNLDRLVDSTYAALGQESFSGKPHALDFVNDLRVKVKANRNMFRVAKLLSEPARKSMLLRIRDCLNDLEEVVASQLGVKMS*
Ga0058899_118624241	3300004631	Forest Soil	MGSNYAAAGNPQNELRVQSNSLQRDEYALDNELDNRIKNLDKLVDSLQATPSPISNSGKPHALDFVNDLRVRIKATHNLFRVAKLLSEPARESMFSKVRDSLNDLEESIASQSGVKTS*
Ga0066388_1001061992	3300005332	Tropical Forest Soil	MGSNHAVAGYSQTEWRVPSKSLPRHEYALDNELENRIKNLDELVDSLHATPDPMCFSRKPHALDLVKDLRTNIKASHNLLRVAKLLSEPVRESMISKLRDSLNDLEEVIASHLDVKTN*
Ga0070691_109089681	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRSNHASVGDPQREPRIQSQSLLGAESTLENDLENRIRNLDTLVDSTYSALDQESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMLSKVNHSLNELEEVVASELGVKMN*
Ga0070711_1014638941	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRSNHASVGDPQREPRIQSQSLLGAESTLENDLENRIRNLDTLVDSTYSALDQESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMLSKVDHSLNDLEEVVASQLGVKMN*
Ga0066689_101170671	3300005447	Soil	PLQRDEYASDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVAKLLSEPARGSMVSRIRDSLNDLEESIASHLVVGTS*
Ga0070707_1004527972	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGSNHAVAGNPQTEWGAPSKYLQRDGYASDNELENRLKDLDKLVDSLQATSDQTSFLGKPHALDLVNDLRGKINASRNLLRVAKVLSEPARGSMFSKVHDSLNDLEESIASHLVVGTS*
Ga0073909_100203924	3300005526	Surface Soil	MRSNHAITGNPQREPRIQSQSLLRDESTLENDLENRIRNLDKLVDSTYLALDHESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMLSKVNHSLNELEEVVASELGVKMN*
Ga0070733_101122712	3300005541	Surface Soil	MGSSHANAGNPQAERGVQSNSPQRDEYPSENELENRIKNLDKLVNSTHAALEQVSFSGKPCALDLVTDLRVKVKACHDLLRVAKLLSDPARKSMFSKIRDSLNELEDVVASHLGVRMN*
Ga0070761_102628102	3300005591	Soil	MANHAVWNPPTKLRGQSEALQEVEFALENDLENRINNLDRLVDSVSSALGQESFSGKPHALDLMNDLRVKIKATHNMLRVAKLLSEPARESMLSRVRHSLHDLEDTIASKLGVEMT*
Ga0070762_101744921	3300005602	Soil	MRSNHAIAGNSRIEPAVQNKSLQIGESATENELENRIENLDKLVHSVHDALHQVSFSGKLRALDLMNDLRVKIKATHNMLRVAKLLSEPARESMLSRVRDSLKDLEQVIASNLDVEMT*
Ga0070763_102564852	3300005610	Soil	MDSNHAITGNPQREPRTQSQSLLRDESTLENDLENRIENLNKLVESTYAALGPESFSGKPHALDLVNDLRVKIKANRNMLRVAKLLREPARKSMLLRVRDCLSDLEETVASQLGVKMI*
Ga0070765_1000246592	3300006176	Soil	MRSNHVVAGNSPTEPAVQNKFRQTDESRLENELENRIQNLDKLIHSVHDALHQVSFSGKPRALDLMNDLRVKIKATHNMLRVAKLLREPARESMLSRVRDSVKDLEQVIASNLDVELA*
Ga0079221_108559831	3300006804	Agricultural Soil	MGSNHAATWNPQTEWGIPSRHPQRNEYALQNELENRIKNLDKLVDSLQATSDQMSFSGKPHAHDLVNDFRTKIKATQNLLRVAKLLSEPVRESMFSRVRDSVNDLEESIASHLAVKRS*
Ga0079220_101097373	3300006806	Agricultural Soil	EEKALENRIRNLDRLVESAYATLQRESIPGEPHPLDLANDLRVRIQASRNLFRVARLLSEPARESMFSKVHDSLDELEEIVASELSVKMNGGS*
Ga0099829_100374292	3300009038	Vadose Zone Soil	MGSSHVIAGNSQTELSVQNKSLQRDEYALENELENRIKNLDRLVDSVHAALEQESFSGKPHAVDLVIDLRMKIKASRNMLQVAKLLREPARESMLSKVRESLNDLEQAFASHLGVEMT*
Ga0099829_101053541	3300009038	Vadose Zone Soil	MGSNHAGAGNPATESGAQGKFLPRHEYAVDNELENRIKNLDKLLDGLRITPDQVSVPGNPQALDIVNDLRAKIKASHDLLRVAKLLSDPARESMFLKISDSLYDLEESIASHLGVKSS*
Ga0099829_102089611	3300009038	Vadose Zone Soil	MSEAEEEYESWPRRMVMATNHTVPGNPQTELRVQSNSPQRDEYSSENELENRIKNLNKLVDSTHAALEQVSFSGKFRALGLVTDLRVKIKASDNLLRVAKLLSEPARASMFSKVRDSLNDLEEVIASHLGVRMN*
Ga0099829_103103133	3300009038	Vadose Zone Soil	MGLNHAVAGNPQTDLRVQSNFPQRDEYSSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALDLVTDLRVKIKASHNLLRVAKLLSEPARASMFSKVRDSLNDLEEVIASHLGVTT
Ga0099829_106225262	3300009038	Vadose Zone Soil	MGSHHALAGNPQTEWRVPSKPLQRDEYASDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVANLLSEPARGSMFSKVRDSLNDLEESIASHLVVGTS*
Ga0099829_109292242	3300009038	Vadose Zone Soil	LEDRVKNLDRLVDSLHATPDQVSFSGKPRVLDLVTDLRVKIKASHNLLRVAKLLSEPARKSMFSKIRDSLNDLEEAIASHLGVTTN*
Ga0099830_106005841	3300009088	Vadose Zone Soil	MSSNHAIPGNPQREPRIQSQSLLRDESSPENDLENRIINLDKLVDSTYAARGQESFPGKPHALDLVNDLRVKIKASDNLFRVAKLLSEPARESMFSKVHESLNDLEEVVASQLGVKMN*
Ga0099830_106868401	3300009088	Vadose Zone Soil	LENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVANLLSEPARGSMFSKVRDSLNDLEESIASHLVVGTS*
Ga0099830_107794111	3300009088	Vadose Zone Soil	RDEYGLDDELENRIKNLDRLVDSLNATSDQMSFSGKPHALDLVNDLRVKIKASHNLLRVAKLLSEPARASMFSKVRDSLNDLEEVIASHLGVTTN*
Ga0099830_108294892	3300009088	Vadose Zone Soil	MSSSHAFAGNPQTELRVPIRSLQRDEYRPDNELENRIKNLDKLVDSLHATPDPMSFSGKPHALNLVNDLRTKIKASNNLLRVAKLLSEPVRESMFSKLRDSLN
Ga0099830_114125461	3300009088	Vadose Zone Soil	MGSNHAVAGNPQTEWGAPSKYLQRDGCASDNELENRLKDLDKLVDSLQASSDQTSFLGKPHALDLVNDLRGNINASRNLLRVAKLLSEPAR
Ga0099828_100454727	3300009089	Vadose Zone Soil	MGLNHAVAGNPQTELRVQSNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALDLVTDLRVKIKASHNLLRVAKLLSEPARASMFSKVRDSLNDLEEVIASHLGVTTN*
Ga0099828_103066361	3300009089	Vadose Zone Soil	QSLLRDESSPENDLENRIINLDKLVDSTYAARGQESFPGKPHALDLVNDLRVKIKASHNLFRVAKLLSEPARESMFSKVHESLNDLEEVVASQLGVKMN*
Ga0116214_11115572	3300009520	Peatlands Soil	MGLNHTIAGNPCTELRVQTKSLQTDGYALENELENRIKILDKLVDSIRPGPDQVSFSGKPHALDLVNDLRVKIKANRNIVRVAKLLSEPARGSMFSKIGDSLNDLEEVIASQLGVKTN*
Ga0126380_102874752	3300010043	Tropical Forest Soil	MGSDHAITGNSHTELTAQGKALHIEEPEVENELENRMRNIDQLVHSVHGALLKESFSGKPGALDLMNDLRLKIKTTHNTLRVAKLLSEPARESMLSSVRNSLNDLESVIASRLGTEMT*
Ga0127503_101030511	3300010154	Soil	MRSNHAITGNPEREPRIQSQSLLGAESTLEHDLENRIRNLDTLVDSTYSALDQESFPGKPHALDRVNDLRVKIKASQNLFRVAKLLSEPARESMFSKVDHSLNDLEEVVASELGVKMN*
Ga0126370_115813292	3300010358	Tropical Forest Soil	MGSNHAVVGYSQTEWRVPSKSLPRHEYALDNELENRIKNLDELVDSLHATPDPMCFSRKPHALDLVNDLRTNIKASHNLLRVAKLLSEPVRESMISKLRDSLNDLEEVIASHLDVKTN*
Ga0126372_132629551	3300010360	Tropical Forest Soil	ALDNELENRIKNLDELVDSLHATPDPMCFSRKPHALDLVNDLRTNIKASHNLLRVAKLLSEPVRESMISKLRDSLNDLEEVIASHLDVKTN*
Ga0134126_105698991	3300010396	Terrestrial Soil	MQLTRSDLTTSGNTLRKSGIENQTLLTDEYTEERALENRIRNLDKLVDSAYAALQGEPFPGEPHPLDLANDLRVKIQASRNLFRVAKLLSEPARESMFSKVHDSLDDLEETVASELSVKMNDRG*
Ga0150983_116306332	3300011120	Forest Soil	MWLGRMLMANHAVWNPPTKLRDQSEALQEVEFALENDLENRINNLGKLVDSVSFALGQESFSGKPHALDLMNDLRVKIKATHNMLRVAKLLSEPARESMLSRVRDSLKDLEQVIASNLDVEMT*
Ga0150983_128737311	3300011120	Forest Soil	MLMGSNYAAAGNPQNELRVQSNSLQRDEYALDNELDNRIKNLDKLVDSLQATPSPISNSGKPHALDFVNDLRVRIKATHNLFRVAKLLSEPARESMFSKVRDSLNDLEESIASQSGVKTS
Ga0150983_144943191	3300011120	Forest Soil	EDELENDLENRIKNLNKLVESLASALRQETFSGKPKALDLVNDLRVKIKANQNMFRVGKLLSEPARHSVISKVCDSLNDLEQFVASNLGVEMSKRH*
Ga0150983_163938281	3300011120	Forest Soil	MDSNHAVAGNPQTELGVQSKSLQRDEYGLDDELENRIKNLDKLVDSLHATSDQMSFSGKPHALNVVNDLRVRIKASHNLLRVARLLSEPARKSMLSKLRDSVNDLEESIASHLSAKTS*
Ga0137392_101685602	3300011269	Vadose Zone Soil	MGSSHVIAGNSQTELSVQNKSLQRDEYALENELENRIKNLDRLVDSVHAALEQESFSGKPHALDLVIDLRMKIKASRNMLQVAKLLREPARESMLSKVRESLNDLEQAFASHLGVEMT*
Ga0137391_109251012	3300011270	Vadose Zone Soil	MGSNHGVAGNPQTEWGAPSKYLQRDGCASDNELENRLKNLDKLVDSLQATSDETSFLGKSHALDLVNDLRAKIKASQNLLRVANLLSEPARGSMFSKVRDSL
Ga0137393_104827662	3300011271	Vadose Zone Soil	MGSSHVIAGNSQTELSVQNKSLQRDEYALENELENRIKNLGRLVDSVHAALEQESFSGKPHALDLVIDLRMKIKASHNMLQVAKLLREPARESMLSKVRECLNDLEQAFASHLGVEMT*
Ga0137393_110273612	3300011271	Vadose Zone Soil	LQRDEYALDNELENRIKNLDKLVDSLDAASDQMSFSGKPHALDLVNDLRAKIKASQNLLRVANLLSEPARGSMFSKVRDSLNDLEESIASHLVVGTS*
Ga0137393_112634991	3300011271	Vadose Zone Soil	MSKALEEYESWPRRMVMATNHTVPGNPQTELRVQSNSPQRDEYSSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALDLVTDLRVKIKASHNLLRVAKLLSEP
Ga0137389_100071795	3300012096	Vadose Zone Soil	MGSSHVIAGNPKTELSVQNKSLPRDEYALENELENRIKNLDRLVDSVHAALEQESFSGKPHAVDLVIDLRMKIKASRNMLQVAKLLREPARESMLSKVRESLNDLEQAFASHLGVEMT*
Ga0137389_102076752	3300012096	Vadose Zone Soil	MSLNHAVAGNPQTEWRVPRKPLQRAEYASDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVANLLSEPARGSMFSKVRDSLNDLEESIASHLVVGTS*
Ga0137389_104944872	3300012096	Vadose Zone Soil	MGLNHAVAGNPQTELRVQSNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALYLVTDLRVKIKASHNLLRVAKLLSEPARASMFSKIRDSLNDLEEVIASHLGVTTN*
Ga0137389_112965682	3300012096	Vadose Zone Soil	MGSNHAAAGNWQTGSRAQSKSLQRRDYGADNDLEDRIKHLGNLVDSLHTTPTDQMSFSGEPRALDLVTDLRVKIKASHDLLRVAKLLSDPARESMFS
Ga0137388_100044309	3300012189	Vadose Zone Soil	MGSSHVIAGNPKTELSVQNKSLPRDEYALENELENRIKNLGRLVDSVHAALEQESFSGKPHALDLVIDLRMKIKASHNMLQVAKLLREPARESMLSKVRECLNDLEQAFASHLGVEMT*
Ga0137388_100168135	3300012189	Vadose Zone Soil	MSSNHAITGNPQREPRIQSQSLLRDESTLENDLENRIRNLDKLVDSTYAALGQESFPGKPHALDLVNDLRVKIKASHNLFRVARLLSEPARESMFSKVHESLNDLEEVVASQLGVKMN*
Ga0137388_101360162	3300012189	Vadose Zone Soil	MGSHHALAGNPQTEWRVPSKPLQRDEYASDNELENRIKNLDRLVDSLQATSDQMSFSGKPHAHDLVNNFRAKIKANENLLRVAKLLSEPARASMFSKVRDSLNDLEEVIASHLGVTTN*
Ga0137388_116942391	3300012189	Vadose Zone Soil	MGLNHAVAGNPQTDLRVQSNFPQRDEYSSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALDLVTDLRVKIKASHNLLRVAKLLSEPARKSMFSKIRDSLNDLEEAIASHLGVTTN*
Ga0137388_117145111	3300012189	Vadose Zone Soil	MGSNHAIAANPQTERRVQSKSPQRDEYPSQNELENRIKNLDKLVDSTHAALEQESFPGKPRALDLVNDLRVKIKASHDMVRVAKLLSDPARKSMFSKVRDSLNDLEEIVASHLGLRMS*
Ga0137380_100943852	3300012206	Vadose Zone Soil	MRSNHAIAENPQTQLRVPSKPLRRDESALENEVENHLKNLDKLVDSIRAAQDQVSFSGKPHALDLVNDLHVKIKAGHDMVRVAKLLSEPARTSMFSKVRDSLNDLENDFEEVIESHLDVKTN*
Ga0153915_104905162	3300012931	Freshwater Wetlands	KVQSKSLQRNDFALENELENRILNLDKLVDSIHAALDQESFSGKPHALDLMNDLRVKIKASDNLFRVARLLSEPARESMFSKVRDSLKDLEEVVASHLAVEMT*
Ga0164301_100627841	3300012960	Soil	MRSNHASIGDPQREPRIQSQSLLGAECTLEHDLENRIRNLDALVDSTYSSLDQEAFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMFSKVDHSLNDLEEAVASELGVKMN*
Ga0164304_103793241	3300012986	Soil	QSQSLLGAECTLEHDLENRIRNLDALVDSTSSALDQESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMFSKVDHSLNDLEEAVASELGVKMN*
Ga0167668_10997291	3300015193	Glacier Forefield Soil	MGSNHAVAGNPQTELRVQSKSLQRDEYGLGNELENRIKILDKLVDSLHATSDQMSFSGKPHALDLVNDLRVRIKTSHNLLRVANLLSEPARESMLSKIRE
Ga0187821_102897771	3300017936	Freshwater Sediment	MSSSHANAGNPQTELKVQGNSRQRDEYPSENELENRIRNLDKLVDSTHAALERVSFSGKPRALDLVTDLRVKIKATHNMLQVAKLLSEPARASMFSKVRDSLNDLEEV
Ga0187810_101781482	3300018012	Freshwater Sediment	MGSNHAVAGNPQTEWRVQSKSLQRDAYALDNELENRTKNLDKLVDSLHATSDQMSFSGKPHALDLVNDLRMRIKASHNLLRVAKLLSEPARESMLSKIRDSLDDLEESIASHLGVKTN
Ga0066662_100510622	3300018468	Grasslands Soil	MGSHHAVAGNPQTEWRVPGKPLQRDEYASDNELENRIKNLDKLVDSLQASSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVAKLLSEPARGSMVSRIRDSLNDLEESIASHLVVGTS
Ga0210407_100012762	3300020579	Soil	MGSNHALRNSETAPKVQSESVRRNDSPLENEMENRIENLDKLFDSINAALDQESFSDKPHALDLVNDLRVKMKAIHNMFRVAKLLSEPARESMISRVRHSLNDLEEVVASHLGVELT
Ga0210407_100265365	3300020579	Soil	MGSSHANAGNPQAERRVQSNSPQRDEYPSENELENRIKNLDKLVNSTHAALEQVSFSGKPCALDLVTDLRVKVKACHDLLRVAKLLSDPARKSMFLKIRDSLNELEDVVASHLGVRMN
Ga0210407_103729793	3300020579	Soil	MGSSHANAGNPQTELRIQSNSPQRDEYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPCALDLVTDLRVKVKACHDLLRVAKLLRDPARKSMFSKIRDSLNELEDVVASDLGVRMN
Ga0210403_104036632	3300020580	Soil	MGSSHANAGNPQAERRVQSNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPCALDLVTDLRVKVKASHDLLRVAKLLRDPARKSMFSKIRDSLNELEDVVASHLGVRMN
Ga0210403_112508692	3300020580	Soil	MANHAVWNPPTKLRDQSEALQEVEFALENDLENRINNLGKLVDSVSFALGQESFSGKPHALDLMNDLRVKIKATHNMLRVAKLLSEPARESMLSKVRDSLTDLEDVVASKLGVEMT
Ga0210399_106101262	3300020581	Soil	MGSNHAVAGNPQTELRVQSKSLQRDEYALDNELENRIKNLDKLVDSLHATSDQMSFSGKPHAINVVNDLRVRIKASHNLVRVAKLLSQPARESMFSKVRDSLNDLEESIASHLSAKTS
Ga0215015_103366811	3300021046	Soil	MGPEHAVAGNSQTDLSVQGKSLRSDEYALDDELENRIKNLDKIVDSLLATPDRMSFSGKPYVLNLVNDLRVKIKACHNLLRVAKLLSEPARESMFSKIRDSLNDLEESISSHLGAKTS
Ga0215015_104406201	3300021046	Soil	LQREELALDNELENRIKNLEKLVDSLPATSDQMSFAGKPHALDLVNDLRAKIKANQNLLQVAKLLSEPARGSMFSKVRNSLSDLEESIASHLVVRAS
Ga0210400_1000002692	3300021170	Soil	MGSSHANAGNPQAERRVQSNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPCALDLVTDLRVKVKACHDLLRVAKLLRDPARKSMFSKIRDSLNELEDVVASHLGVRMN
Ga0210405_100070716	3300021171	Soil	MGSNHAIAGNSRSEPTVQNQSPQVDESSLENELENRIKNLDKLVNSVHDALHQVSFSGKLRALDLMNDLRLKIKATHNMLRVAKLLSEPARESMLSRVRDSLHDLEQVIASNLDVEMT
Ga0210405_102585611	3300021171	Soil	MGSNYAAAGNPQNELRVQSNSLQRDEYALDNELENRLKNLDKLVDSLQATPGPISDSGKPHALDFVNDLRVRIKATHNLFRVAKLLSEPARESMLSKVGDSVNDLEGLVASHFGVEMT
Ga0210393_103093383	3300021401	Soil	MGLDHAIAANSQTELTDQCKSLQIDESELENELENRIENLDKLLHSVHAALEQESFSRKTHALDLVIDIRMKIKASHQMLQVAKLLS
Ga0210383_10000024153	3300021407	Soil	MANHAVWNPPTELRDQSESLQGAESALDNNLENRINNLDKLVDSINSALGQETFSGKPDALDLVNDLHLKIRATHNMLRVAKLLREPARESMLSKVRDSLNDFEHIVASRFGVEMT
Ga0210398_115512121	3300021477	Soil	MANHAVWNPPTKLRDQSEALQEVEFALENDLENRINNLGKLVDSVSFALGQESFSGKPHALDLMNDLRVKIKATHNMLRVAKLLSEPARESMLSKVRDSLTDLEDVVAS
Ga0210409_105352691	3300021559	Soil	MGSSHANAGNPQAERRVQSNSPQRDEYPSENELENRIKNLDKLVNSTHAALEQVSFSGKPCALDLVTDLRVKVKACHDLLRVAKLLSDPARKSMFSKIRDSLNELEEVVASHLGVRMN
Ga0210409_110047712	3300021559	Soil	NLEKLVESIAAALGQERFSGKPRALDLVNDLRVKIKANQNMFRVGKLLSEPARNSVISRVSDSLNELEQFVASNLGVQMSKRQ
Ga0222728_10560802	3300022508	Soil	RIRSNHAITGDPERGPRIQSQALLGAECILERELENRLGKLDTLVDSTYSALDQESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMFSKVDHSLNDLEEVVASELGVKMN
Ga0242665_103644811	3300022724	Soil	SEVGQTLTERECWQGRMLMGSNHAVAGNPQTELRVQSKSLQSDECALDNELENRIKNLDKLVDSLHATSDQMSFSGKPHAINVVNDLRVRIKASHNLVRVAKLLSQPARESMFSKVRDSLNDLEESIASHLSAKTS
Ga0247543_1012162	3300023677	Soil	MGLNHVIAGNSQTELTAQDKSLQYESTLENELENRIKNLDKLVHSVHAALQQVSFSGKLRALDLMSALRVKINATHNMFRVAKLFSEPARESLLLTVRDSVSDLEEVIASNLDVEMA
Ga0247694_10205372	3300024178	Soil	MRSNQANIGDPQREPRIQSQSLLGAESSLENDLENRISNLDTLVDSTYSALDHESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMFSKLHHSLNDLEEVVASELGVKMN
Ga0247688_10444052	3300024186	Soil	ESTLESDLENRIRNLDTLVDSTYSALDQESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMFSKLHHSLNDLEEVVASELGVKMN
Ga0207646_104212951	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGSNLTVAENPQTELRVQSNFPQRDEYPSENELEDRIKNLDKLVDSLHATPDQMSFSAKPRALDLVTDLRVKIKASHNLLRVAKAPQRSSAQKHVFEDTRFPE
Ga0207646_105118022	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGSNHAVAGNPQTEWGAPSKYLQRDGYASDNELENRLKDLDKLVDSLQATSDQTSFLGKPHALDLVNDLRGKINASRNLLRVAKVLSEPARGSMFSKVHDSLNDLEESIASHLVVGTS
Ga0209235_12539442	3300026296	Grasslands Soil	GNPQTEWRVPGKPLQRDEYASDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVAKLLSEPARGSMVSRIRDSLNDLEESIASHLVVGTS
Ga0209236_100214110	3300026298	Grasslands Soil	MGSHHAVAGNPQTEWRVPGKPLQRDEYASDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVAKLLSEPARGSMVSRIRDSLNDLEESIASHLVVGTS
Ga0257154_10821932	3300026467	Soil	MGSNHAIAGNSQTEPTVQNQSPQIGESALENELENRIKNLDKLVNSVHDALHQVSFSGKLRALDLMNDLRVKIKATHNMLRVAKLLSEPARASMLSRVRDSLHDLEQ
Ga0209648_102855881	3300026551	Grasslands Soil	EYTLENELENRIKNLDKLVDSLQATSDQMSFAGKPHAHDLVNDFRAKIKASQNLLRVAKLLSEPVRESMFSRVRDSVNDLEESIASHLVVKRS
Ga0207505_1077371	3300027459	Soil	MRSNHASVGDLQREPRIQSQLLLGAESTLENDLENRIRNLDTLVDSTYSALDQESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMFSKLHHSLNDLEEVVASELGVKM
Ga0209219_11337351	3300027565	Forest Soil	MGSNHAVPENPQIGSRAQSKSPQRHEYASDIDLEDRIKNLGKFVDSLHATPTDHMSFSGKPRPLDFVIDLRVKIKASHNLLRAAKLLSEPARENIFWRIRDSLNDLEESIASHLGVTTN
Ga0209446_10007595	3300027698	Bog Forest Soil	MANHAVWNPPTGLRHQSESLQRVEFALENDLENRIKNLDKLVDSVNSALGYESFSGKPHALDLMNDLRVKIKATHNMLRVAKLLSEPARESMLSRVRHSLNDLEGIVASNFGVEMN
Ga0209073_101574951	3300027765	Agricultural Soil	ESAYATLQRESIPGEPHPLDLANDLRVRIQASRNLFRVARLLSEPARESMFSKVHDSLDELEEIVASELSVKMNGGS
Ga0209811_100160423	3300027821	Surface Soil	MRSNHASVGDPQREPRIQSQSLLGAESTLENDLENRIRNLDTLVDSTYSALDQESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMFSKVDHSLNELEEVVASELGVKMN
Ga0209180_100556894	3300027846	Vadose Zone Soil	MGSNHAGAGNPATESGAQGKFLPRHEYAVDNELENRIKNLDKLLDGLRITPDQVSVPGNPQALDIVNDLRAKIKASHDLLRVAKLLSDPARESMFLKISDSLYDLEESIASHLGVKSS
Ga0209180_101447022	3300027846	Vadose Zone Soil	MGSSHVIAGNSQTELSVQNKSLQRDEYALENELENRIKNLDRLVDSVHAALEQESFSGKPHAVDLVIDLRMKIKASRNMLQVAKLLREPARESMLSKVRESLNDLEQAFASHLGVEMT
Ga0209180_101937153	3300027846	Vadose Zone Soil	MGLNHAVAGNPQTELRVQSNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALDLVTDLRVKIKASHNLLRVAKLLSEPARASMFSKVRDSLNDLEEVIASHLGVRMN
Ga0209693_102132201	3300027855	Soil	MDSNHAITGNPQREPRTQSQSLLRDESTLENDLENRIENLNKLVESTYAALGPESFSGKPHALDLVNDLRVKIKANRNMLRVAKLLREPARKSMLLRVRDCLSDLEETVASQLGVKMI
Ga0209701_102352762	3300027862	Vadose Zone Soil	MGSNHAAAGNWQTGSRAQSKSLQRRDYGADNDLEDRIKHLGNLVDSLHTTPTDQMSFSGEPRALDLVTDLRVKIKASHNLLRVAKLLSEPARASMFSKVRDSLNDLEEVIASHLGVTTN
Ga0209701_104909002	3300027862	Vadose Zone Soil	MSSSHAFAGNPQTELRVPIRSLQRDEYRPDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVANLLSEPARGSMFSKVRDSLNDLEESIASHLVVGTS
Ga0209167_100413433	3300027867	Surface Soil	MGSSHANAGNPQAERGVQSNSPQRDEYPSENELENRIKNLDKLVNSTHAALEQVSFSGKPCALDLVTDLRVKVKACHDLLRVAKLLSDPARKSMFSKIRDSLNELEDVVASHLGVRMN
Ga0209283_100414932	3300027875	Vadose Zone Soil	MSSSHAFAGNPQTELRVPIRSLQRDEYRPDNELENRIKNLDKVVDSLHATPDPMSFSGKPHALNLVNDLRTKIKASNNLLRVAKLLSEPVRESMFSKLRDSLNDLEEVIASHLGVKTN
Ga0209283_100640613	3300027875	Vadose Zone Soil	MGLNHAVAGNPQTELRVQSNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALDLVTDLRVKIKASHNLLRVAKLLSEPARASMFSKIRDSLNDLEEVIASHLGVTTN
Ga0209283_103104621	3300027875	Vadose Zone Soil	MGSHHALAGNPQTEWRVPSKPLQRDEYASDNELENRIKNLDKLVDSLQATSDQMSFSGKPHALDLVNDLRAKIKASQNLLRVANLLSEPARGSMFSKVRDSLNDLEESIASHLVVGTS
Ga0209275_103643891	3300027884	Soil	MRSNHAIAGNSRIEPAVQNKSLQIGESATENELENRIENLDKLVHSVHDALHQVSFSGKLRALDLMNDLREKIKATHNMLRVAKLLSEPARESMLSRVRDSLKDLEQVIASNLDVEMT
Ga0247682_10978291	3300028146	Soil	LENRIRNLDTLVDSTYSALDQESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMLSKVNHSLNELEEVVASELGVKMN
Ga0308309_100188487	3300028906	Soil	MRSNHVVAGNSPTEPAVQNKFRQTDESRLENELENRIQNLDKLIHSVHDALHQVSFSGKPRALDLMNDLRVKIKATHNMLRVAKLLREPARESMLSRVRDSVKDLEQVIASNLDVELA
Ga0170834_1034001761	3300031057	Forest Soil	MGSSHTNAGNPQAERRVQSNSPQRDEYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPCALDLVTDLRVKVKACHDMLRVAKLLTEPARKSMFSKIRDSLKELEDVVASHLGVRMN
Ga0170818_1030655923	3300031474	Forest Soil	LENRLKNLDRLVESTFAALRQETFSGKPHALDLVNDLRVKIKATQNMFRVGKLLSEPARHSMISKVSDSLHELEEFVASNLGVEMTKRN
Ga0307483_10292832	3300031590	Hardwood Forest Soil	MGSNYAAAGNPQNELRVQSNSLQRDEYALDNELENRLKNLDKLVDSFQATPGPISYSGKPHALDFVNDLRVRIKATHNLFRVAKLLSEPARESMFSKVRDSLNDLEESIATQSGVKTS
Ga0310686_10165624214	3300031708	Soil	MNSSHAIAGNPQTELRVRSKSPQRDEFALENELESRIKNLDNLVDTIHAALGQESFSGKPHALDPLNDLRVKIKASHNMFRVAKLLSEPARASMFWKIRESLSDLEEIIAHHLGVKMS
Ga0310686_1022657371	3300031708	Soil	MGSNHATTGNPQREPRTQSQSLLKDESTLENDLENRIGNLDRLVDSTYAALDQESFSGKPHALDVVNDLRVKIKANRNMFRVAKLLSEPARKSMLLRVRDCLNDLEEAAASQLGVKMI
Ga0310686_1024235681	3300031708	Soil	MLMAVDAVWNPPTDLRDKSESLRRVEFALENDLENRINNLSKLVDSVSYALGQESFSGKPHALDLMNDLRVKIKATHNMLRVAKLLSEPARDSMLSKVRDSLNDLEDIVASNLGGEMT
Ga0310686_1097885664	3300031708	Soil	MADDAVWNPPTELRDKSESLRRVEFALENDLENRINNLSKLVDSVSSALGQESFSGKPHALDLVNDLRVKIKATQNMLRVAKLLSEPARGSMLSKVHDSLNDLEEVVASKFSVEMT
Ga0310686_1140540442	3300031708	Soil	MGSNHAIGNSQTELKAQSKSLQRNDSALENELENRIQNLDKLVDSIYAALDQESFSGKPHALDLVNDLRVKIKASRNIFRVARLLSEPARESMFLKVRDSLKDLEEVVASDLGVEMT
Ga0310686_1147791673	3300031708	Soil	MANHAVWNPPTEPRHKSESLQGVEFALENDLENRIDNLGKLVDSVSSALGQESFSGKPHALDLMNDLRVKIKATYNMLRVAKLLSEPARESMLSKVRDSLNDLEDIVASKLGVEMT
Ga0310813_105856831	3300031716	Soil	STLENDLENRIRNLDTLVDSTYSALGQESFPGKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMLSKVNHSLNELEEVVASELGVKMN
Ga0307469_100149495	3300031720	Hardwood Forest Soil	MGSKHAVAENPQTELGVQNNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALDLVTDLRVKVKASHNLLQVAKLLSEPARKSMFSKIRDSLNELEDVVASHLGLRMS
Ga0307469_112914272	3300031720	Hardwood Forest Soil	MSSSHANARNPQTELRVQSNSPQRDEYPSENELENRIRNLDKLVDSTHAALERVSFSGKPRALDLVTDLRVKIKATHNMLQVAKLLSEPARARMFSKVRDSLNDLEEVIASHLGLRMS
Ga0307469_115519761	3300031720	Hardwood Forest Soil	MRSNHAITGNPQREPRIQSQSLLGAESTLENDLENRIRNLDALVDSTYSALDQESFPDKPHALDLVNDLRVKIKASQNLFRVAKLLSEPARESMLSKVDHSLNDLEEVVASQLGVKMN
Ga0307473_101362942	3300031820	Hardwood Forest Soil	MGSKHAVAENPQTELGVQSNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPRALDLVTDLRVKVKASHNLLQVAKLLSEPARKSMFSKIRDSLNELEDVVASHLGLRMS
Ga0307473_103877481	3300031820	Hardwood Forest Soil	MSSSHANARNPQTELRVQSNSPQRDEYPSENELENRIKNLDKLVDSTHAALERVSFSGKPRALDLVTDLRVKIKATHNMLQVAKLLSEPARASMFSKVRDSLNDLEEVLASHLGVRMN
Ga0307479_100022481	3300031962	Hardwood Forest Soil	MGLNHAAAGNPQTELGVQSKFQQRVECALDNELENRIKNLDKIVDSLLATPDQMSFSSKPHVLNLVNDLRVKIKASHNLLRVAKLLSEPARGSVFSKIRDSLNDLEESVASHIGVKTS
Ga0307479_100027637	3300031962	Hardwood Forest Soil	MGPEHAVAGNSQTDLSVQGKSLRSDEYALDDELENRIKNLDKIVDSLLVTPDRMSFSGKPYVLNLVNDLRVKIKACHNLLRVAKLLSEPARESMFSKIRDSLNDLEESISSHLGAKTS
Ga0307479_100240004	3300031962	Hardwood Forest Soil	MGSSQANAGNPQIELRVQNNSPQRDDYPSENELENRIKNLDKLVDSTHAALEQVSFSGKPCALDLVTDLRVKIKASHDLLRVAKLLRDPARKSMFSKIRDSLNELEDVVASHLGVRMN
Ga0311301_103246622	3300032160	Peatlands Soil	MGLNHTIAGNPCTELRVQTKSLQTDGYALENELENRIKILDKLVDSIRPGPDQVSFSGKPHALDLVNDLRVKIKANRNIVRVAKLLSEPARGSMFSKIGDSLNDLEEVIASQLGVKTN
Ga0307471_1001402134	3300032180	Hardwood Forest Soil	MSSSHANARNPQTELRVQSNSPQRDEYPSENELENRIKNLDKLVDSTHAALERVSFSGKPRALDLVTDLRVKIKATHNMLQVAKLLSEPARARMFSKVRDSLNDLEEVIASHLGLRMS
Ga0348332_101872261	3300032515	Plant Litter	RRILMNSSHAIAGNPQTELRVRSKSPQRDEFALENELESRIKNLDNLVDTIHAALGQESFSGKPHALDPLNDLRVKIKASHNMFRVAKLLSEPARASMFWKIRESLSDLEEIIAHHLGVKMS
Ga0316620_121037491	3300033480	Soil	MSSNHAIAGNPQGEPRIQSQSLLRDESTLENDLENRIRNFDKLVDSTYAALGQELFPGKPLHALTLVNELRVKIKANRNMFRVAKLLSEPARGSILLKVRDCLNDLEEVVASQLGIKLS
Ga0316624_102193231	3300033486	Soil	MGSNHAIGNSQTELKVQSKSLQRNDSALENELENRIKNLDKLIDSIHAALDQESFSGKPYALDLVNDLRVKIKASRNIFRVARLLSEPARESMFSKVRDSLKDLEEVVASHLGVEMT
Ga0316628_1010043361	3300033513	Soil	MSSNHAIAGNPQGEPRIQSQSLLRDESTLENDLENRIRNLDKLVDSTYAALGQELFPGKPLHALTLVNELRVKIKANRNMFRVAKLLSEPARGSILLKVRDCLNDLEEVVTSQSSVKLSSLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060180

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences