Metagenome Family F060178

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060178
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	50 residues
Representative Sequence	MTGLTVWQTDDCCPLCGDLLRARTQADGSITHECGCGWSVTWQADPEGGQW
Number of Associated Samples	79
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.46 %
% of genes near scaffold ends (potentially truncated)	27.82 %
% of genes from short scaffolds (< 2000 bps)	87.22 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.466 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (26.316 % of family members)
Environment Ontology (ENVO)	Unclassified (31.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.135 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.38% Coil/Unstructured: 69.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01580	FtsK_SpoIIIE	13.53
PF14659	Phage_int_SAM_3	3.01
PF07690	MFS_1	0.75
PF00293	NUDIX	0.75
PF00392	GntR	0.75
PF04156	Obsolete Pfam Family	0.75
PF12728	HTH_17	0.75
PF00589	Phage_integrase	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	Cell cycle control, cell division, chromosome partitioning [D]	13.53

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.22 %
Unclassified	root	N/A	12.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.47 %
Unclassified	root	N/A	12.78 %
Viruses	superkingdom	All Organisms → Viruses	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.47 %
Unclassified	root	N/A	12.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.71 %
Unclassified	root	N/A	12.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.71 %
Unclassified	root	N/A	12.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.19 %
Unclassified	root	N/A	12.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	13.53 %
Unclassified	root	N/A	12.78 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.78 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.78 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.78 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	3.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.78 %
Pseudonocardia sp. CNS-139	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	3.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_114090165	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300004152\|Ga0062386_100093319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2308	Open in IMG/M
3300005537\|Ga0070730_10261542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1140	Open in IMG/M
3300005538\|Ga0070731_10429605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	879	Open in IMG/M
3300005764\|Ga0066903_107984805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	543	Open in IMG/M
3300006176\|Ga0070765_100045417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3548	Open in IMG/M
3300009520\|Ga0116214_1001136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	10481	Open in IMG/M
3300009698\|Ga0116216_10778316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300010048\|Ga0126373_11296721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	794	Open in IMG/M
3300010361\|Ga0126378_12357122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300010376\|Ga0126381_102126805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	808	Open in IMG/M
3300010379\|Ga0136449_100404017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2422	Open in IMG/M
3300010379\|Ga0136449_101009850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1338	Open in IMG/M
3300012201\|Ga0137365_10124554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1937	Open in IMG/M
3300016270\|Ga0182036_11276626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300016294\|Ga0182041_12255390	Not Available	509	Open in IMG/M
3300016319\|Ga0182033_12070696	Not Available	519	Open in IMG/M
3300016387\|Ga0182040_11381347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300016445\|Ga0182038_11619968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300016445\|Ga0182038_11761750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300017821\|Ga0187812_1124587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	835	Open in IMG/M
3300017821\|Ga0187812_1224160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	599	Open in IMG/M
3300017822\|Ga0187802_10264833	Not Available	667	Open in IMG/M
3300017924\|Ga0187820_1078535	Not Available	926	Open in IMG/M
3300017924\|Ga0187820_1118859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300017924\|Ga0187820_1264227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300017926\|Ga0187807_1002241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6061	Open in IMG/M
3300017926\|Ga0187807_1030922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1658	Open in IMG/M
3300017926\|Ga0187807_1101591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	904	Open in IMG/M
3300017926\|Ga0187807_1173917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	693	Open in IMG/M
3300017928\|Ga0187806_1276843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300017928\|Ga0187806_1299818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300017932\|Ga0187814_10069481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1292	Open in IMG/M
3300017932\|Ga0187814_10194600	Not Available	761	Open in IMG/M
3300017932\|Ga0187814_10323480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300017932\|Ga0187814_10363221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560	Open in IMG/M
3300017937\|Ga0187809_10427048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300017942\|Ga0187808_10158595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	999	Open in IMG/M
3300017943\|Ga0187819_10057657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2306	Open in IMG/M
3300017943\|Ga0187819_10238097	All Organisms → Viruses → Predicted Viral	1067	Open in IMG/M
3300017955\|Ga0187817_10288051	Not Available	1047	Open in IMG/M
3300017955\|Ga0187817_10880498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	572	Open in IMG/M
3300017955\|Ga0187817_11119280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	506	Open in IMG/M
3300017961\|Ga0187778_10350726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	961	Open in IMG/M
3300017961\|Ga0187778_10466199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300017961\|Ga0187778_10640569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300017966\|Ga0187776_10207044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1236	Open in IMG/M
3300017970\|Ga0187783_10038248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3554	Open in IMG/M
3300017970\|Ga0187783_10132815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1836	Open in IMG/M
3300017972\|Ga0187781_10222769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1332	Open in IMG/M
3300017972\|Ga0187781_10739034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	713	Open in IMG/M
3300017972\|Ga0187781_11177006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300017973\|Ga0187780_10004353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10633	Open in IMG/M
3300017973\|Ga0187780_10491912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300017973\|Ga0187780_10544931	Not Available	831	Open in IMG/M
3300017973\|Ga0187780_10680723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	741	Open in IMG/M
3300017973\|Ga0187780_11073060	Not Available	588	Open in IMG/M
3300017974\|Ga0187777_10227421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1262	Open in IMG/M
3300017974\|Ga0187777_10481280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	866	Open in IMG/M
3300017999\|Ga0187767_10345630	Not Available	522	Open in IMG/M
3300018001\|Ga0187815_10304755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300018001\|Ga0187815_10373613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300018062\|Ga0187784_11006783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300018062\|Ga0187784_11159097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300018085\|Ga0187772_10110810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1779	Open in IMG/M
3300018085\|Ga0187772_10127991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1662	Open in IMG/M
3300018085\|Ga0187772_10227677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1260	Open in IMG/M
3300018085\|Ga0187772_10593291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	787	Open in IMG/M
3300018085\|Ga0187772_10682781	Not Available	735	Open in IMG/M
3300018085\|Ga0187772_10765706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300018085\|Ga0187772_10808216	Not Available	677	Open in IMG/M
3300018085\|Ga0187772_10823294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	671	Open in IMG/M
3300018085\|Ga0187772_10992970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300018085\|Ga0187772_11043932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300018086\|Ga0187769_10110224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1986	Open in IMG/M
3300018086\|Ga0187769_10147669	Not Available	1720	Open in IMG/M
3300018086\|Ga0187769_10485690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300018086\|Ga0187769_11045759	Not Available	618	Open in IMG/M
3300018086\|Ga0187769_11392539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	530	Open in IMG/M
3300018090\|Ga0187770_11382461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300027497\|Ga0208199_1015604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1726	Open in IMG/M
3300027568\|Ga0208042_1146720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300027570\|Ga0208043_1148452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300027812\|Ga0209656_10020839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4006	Open in IMG/M
3300027857\|Ga0209166_10603384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300027869\|Ga0209579_10369558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300028906\|Ga0308309_10055326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2883	Open in IMG/M
3300031543\|Ga0318516_10204698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300031543\|Ga0318516_10560403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	654	Open in IMG/M
3300031544\|Ga0318534_10262950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	995	Open in IMG/M
3300031544\|Ga0318534_10288061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	946	Open in IMG/M
3300031544\|Ga0318534_10760826	Not Available	545	Open in IMG/M
3300031640\|Ga0318555_10310758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	853	Open in IMG/M
3300031668\|Ga0318542_10313351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	804	Open in IMG/M
3300031679\|Ga0318561_10369456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	787	Open in IMG/M
3300031681\|Ga0318572_10278365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	987	Open in IMG/M
3300031708\|Ga0310686_105372340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4109	Open in IMG/M
3300031708\|Ga0310686_118458678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1692	Open in IMG/M
3300031713\|Ga0318496_10147076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1285	Open in IMG/M
3300031713\|Ga0318496_10469549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	696	Open in IMG/M
3300031724\|Ga0318500_10263727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	838	Open in IMG/M
3300031747\|Ga0318502_10233007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1072	Open in IMG/M
3300031748\|Ga0318492_10488948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	652	Open in IMG/M
3300031751\|Ga0318494_10186533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1178	Open in IMG/M
3300031751\|Ga0318494_10853180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300031771\|Ga0318546_11052747	Not Available	572	Open in IMG/M
3300031781\|Ga0318547_10849244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300031792\|Ga0318529_10592380	Not Available	514	Open in IMG/M
3300031805\|Ga0318497_10314432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	873	Open in IMG/M
3300031896\|Ga0318551_10940573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300031897\|Ga0318520_10278295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1004	Open in IMG/M
3300031897\|Ga0318520_10561838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300031954\|Ga0306926_11015403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300031954\|Ga0306926_12012557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	649	Open in IMG/M
3300031959\|Ga0318530_10315409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300032010\|Ga0318569_10338303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300032044\|Ga0318558_10152127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1114	Open in IMG/M
3300032054\|Ga0318570_10589603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300032055\|Ga0318575_10635865	Not Available	540	Open in IMG/M
3300032076\|Ga0306924_11115190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	859	Open in IMG/M
3300032089\|Ga0318525_10481572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300032091\|Ga0318577_10435862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	626	Open in IMG/M
3300032160\|Ga0311301_10118984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4996	Open in IMG/M
3300032160\|Ga0311301_12420010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	591	Open in IMG/M
3300032160\|Ga0311301_12518126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	575	Open in IMG/M
3300032160\|Ga0311301_12952014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300032261\|Ga0306920_100395570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2055	Open in IMG/M
3300032261\|Ga0306920_103279078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300032805\|Ga0335078_10150993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3287	Open in IMG/M
3300032895\|Ga0335074_10003538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21412	Open in IMG/M
3300032895\|Ga0335074_10077389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4463	Open in IMG/M
3300032895\|Ga0335074_10237493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2163	Open in IMG/M
3300033290\|Ga0318519_10545837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	701	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.70%
Aquatic	Environmental → Aquatic	20.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.70%
Freshwater	Environmental → Aquatic → Freshwater	20.30%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	29.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.30%
Loam	Environmental → Terrestrial → Soil → Loam	2.26%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	29.32%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	18.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	26.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	18.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.26%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1140901653	3300000956	Soil	MNAATVWQTDDCCPLCGGLLWARIQADGSLSQECDCGWYVTWAADPVGEEQ*
Ga0062386_1000933192	3300004152	Bog Forest Soil	MTEATLWQTDDCCPSCGCLLRQRIAADGSVTEECQCGWSVTWQASPDEGDQ*
Ga0070730_102615422	3300005537	Surface Soil	MTSGTIWQTGDCCPCCGNLLRQHTDADGSITDACGCGWSLTWPADPAGGDQ*
Ga0070731_104296052	3300005538	Surface Soil	MTTLTIWQTGDCCPSCGNLLRQHTDADGSVTETCDCGWKTTWHADPAGGDQ*
Ga0066903_1079848052	3300005764	Tropical Forest Soil	MTDRTLWQTDDCCPLCGCLVRQRVQADGLVTQQCGCGWLVTWQADPDRGER*
Ga0070765_1000454176	3300006176	Soil	MADLTLWQTDDCCPACGDLLRQRIHADRSVTEECGCGWSVTWQASPAGDEQ*
Ga0116214_10011368	3300009520	Peatlands Soil	MTEATLWLTDDCCPACGALLRQRIQADGPVTEECGCGWSVTWQASPDGGDQ*
Ga0116216_107783162	3300009698	Peatlands Soil	MTEATVWQTDDCCPSCGGLLLQRILADGSVTEECGCGWSVTWQVHPGGGDR*
Ga0126373_112967211	3300010048	Tropical Forest Soil	MTEATLWLTDARCPSCGCLLRQRIQADGSVTEECGCGWSVTWQASPAGDGDQ*
Ga0126378_123571221	3300010361	Tropical Forest Soil	MTALTIWQTDDCCPGCGALLRERIGADGSVIQECGCGWSVTWQASPAGDGDQ*
Ga0126381_1021268052	3300010376	Tropical Forest Soil	RLTDARCPSCGCLLRQRIQADGSVTEECGCGWSVTWQASPAGDGDQ*
Ga0136449_1004040172	3300010379	Peatlands Soil	MADLTLWQTDDRCPACGDLVRQRIQADGSVTEECGCGWSVTWQVHPGGGDR*
Ga0136449_1010098502	3300010379	Peatlands Soil	MIATTVWQTDECCPRCGGLLSQRISADGSVNEECGCGWSVTWQADPDGVEQ*
Ga0137365_101245543	3300012201	Vadose Zone Soil	MSAATVWQTDDCCPWCGGLLWARIQADGSLTQECGCGWYVTCAPIPDGGER*
Ga0182036_112766261	3300016270	Soil	MTAPTIWQTDDCCPACGALLRERIGADGSITQECGCGWSVTWQADPAGGEG
Ga0182041_122553902	3300016294	Soil	TDDCCPLCGALLRQRTEADGSITQECGCGWHVTWQADPEGGQW
Ga0182033_120706962	3300016319	Soil	WQTDDCSPLCGGLLWQGTHADGSITQQCGCGWSVTWQADPEGDQW
Ga0182040_113813471	3300016387	Soil	MSALAIWQTDDCCPSCGALLRERIAADGSITQECGCGWSVTWQADPDGGD
Ga0182038_116199682	3300016445	Soil	MTEATLWQTDDRCPSCGELLRQRTQDDGSITQDCDCGWEVTWHADPGGGDQ
Ga0182038_117617501	3300016445	Soil	PAGPPGRYRMTAMTIWQTDDCCPACGALLRERIGADGSITQECGCGWSVTWQADPDGGEG
Ga0187812_11245872	3300017821	Freshwater Sediment	MADLTVWQTDDCCPVCGALLRQRTQADGSVTEECGCGWEITWHTDPEGGDQ
Ga0187812_12241602	3300017821	Freshwater Sediment	MTEATLWQTGDCCPSCGGLLRQRTHSDGSITEECGCGWSVTWQADPGGGES
Ga0187802_102648332	3300017822	Freshwater Sediment	MTPPVLWQTDDCCPLCGALLRACTQADGSITEECGCGWHVTWQADPEGDPW
Ga0187820_10785352	3300017924	Freshwater Sediment	MTALTVWLADDCCPLCGGLLRQRTQADGSITEECGCGWSIVWQADPEGDAW
Ga0187820_11188592	3300017924	Freshwater Sediment	MTALIVWLTDDCCPRCGGLLRQRTQADGSITHECGCGWHVTWQADPDEGGQQ
Ga0187820_12642271	3300017924	Freshwater Sediment	MTETLWQTDDCCPACGCLLRQRIQAAGSVTEECGYGWWVTWQADPDG
Ga0187807_10022417	3300017926	Freshwater Sediment	MTEATLWQTDDCCPSCGCFLWQRIQADGSVTEECECGWSATWKADSDGGEQ
Ga0187807_10309221	3300017926	Freshwater Sediment	DDCCPLCGGLLRACTQADGPVTEECGCGWHVTWQSDPEGG
Ga0187807_11015912	3300017926	Freshwater Sediment	MTETLWQADDCCPACGALLRQRIQAAGSVTEECGCGWWVTWQTAPDAGER
Ga0187807_11739172	3300017926	Freshwater Sediment	MNAGVLWQTDDCCPSCGGLLRQRTQAGGSITQECGCGWSITWQADPEGGQS
Ga0187806_12768432	3300017928	Freshwater Sediment	MTALTVWLTDDCCPVCGGLLRARTQADGSLTQECGCGWSVTWQADPEGGQW
Ga0187806_12998182	3300017928	Freshwater Sediment	MNAPVLWQTDDCCPLCGGLLRARTQAAGSITHECGCGWSVTWQADPDRGQS
Ga0187814_100694813	3300017932	Freshwater Sediment	MNAPVLWQTDDCCPLCGALLRACTQADGSITEECGCGWSIVWQADPEGDPR
Ga0187814_101946002	3300017932	Freshwater Sediment	MNAPVLWQTDDCCPLCGGLLRARTQAAGSITHECGCGWSVTWRADPDGGQS
Ga0187814_103234802	3300017932	Freshwater Sediment	GGGAGMADLTVWQTDDCCPVCGALLRQRTQADGSVTEECGCGWEITWHTDPEGGDQ
Ga0187814_103632212	3300017932	Freshwater Sediment	MTTTTWWLTDDCCPACGCFLRQRTQADGSVTEECGCGWSVTWHGDPDVGDQ
Ga0187809_104270482	3300017937	Freshwater Sediment	WQTDDCCPSCGCFLWQRIQADGSVTEECECGWSATWKADSDGGEQ
Ga0187808_101585953	3300017942	Freshwater Sediment	MNAPVLWQTDDCCPLCGGLLRACTQADGPVTEECGCGWHVTWQADPEGDPW
Ga0187819_100576572	3300017943	Freshwater Sediment	MADLTVWQTDDCCPVCGALLRQRTQADGSVTEECGCGWEITWHADPEGGDQ
Ga0187819_102380972	3300017943	Freshwater Sediment	MTDLTLWQTDDCCPSCGCLLRQRTQADGSVTEECGCGWSVTWHGDPDVGDQ
Ga0187817_102880512	3300017955	Freshwater Sediment	MTPPVLWQTDDCCPLCGALLRACTQADGSITEECGCGWSIVWQADPEGDPR
Ga0187817_108804982	3300017955	Freshwater Sediment	MTDLTVWQTDDCCPSCGCLLRQRIQADGSVTEQCSCGWSVTW
Ga0187817_111192802	3300017955	Freshwater Sediment	MTEATLWLTDDCCPACGALLRQRIQADGSVTEECGCGWSVTWQADPDRGES
Ga0187778_103507262	3300017961	Tropical Peatland	LWQTDDCCPACGALLRERITADGSITQECGCGWSVTWQADPDGGERR
Ga0187778_104661992	3300017961	Tropical Peatland	MADLTVWQTDDCCPSRGELLRQRTQADGSITEECGCGWEVTWPANPEGRGQ
Ga0187778_106405692	3300017961	Tropical Peatland	MDGLTVWQTDDCCPSCGELLRQRTQADGSVTDECGCGWEVTWHADPDGGEQ
Ga0187776_102070442	3300017966	Tropical Peatland	MTALTIWQTDDCCPGCGALLQERTGADGSIIQECGCGWSVTWHADPAGGDQ
Ga0187783_100382482	3300017970	Tropical Peatland	MTGLTVWQTDDCCPLCGGLLWQRTQADGSITQDCGCGWAVTWQADPAGGDQ
Ga0187783_101328152	3300017970	Tropical Peatland	MNAPVLWQTDDCCPLCGALLRARTQGDGSITQECGCGWHVTWQADPEGGPW
Ga0187781_102227692	3300017972	Tropical Peatland	MNAPVLWQTDDCCPLCGALLRQHTQADGSITQECGCGWHVTWQADPEGDQR
Ga0187781_107390342	3300017972	Tropical Peatland	MADLTVWQTDDCCPSCGELLRQRTQTDGSITDECGCGWSVTWHADPSGGDQ
Ga0187781_111770062	3300017972	Tropical Peatland	MTDLTVWQTDDCCPSCGELLRQRIETDGSVTDECGCGWSVTW
Ga0187780_100043536	3300017973	Tropical Peatland	MNAPTVWLADECCPLCAGLLRARTQADGPVTEECGCGWSVTWQGDPEGGQW
Ga0187780_104919122	3300017973	Tropical Peatland	MADLTVWQTDDCCPSRGELLRQRTQADGSITDECGCGWAVTWHADPEGRGQ
Ga0187780_105449313	3300017973	Tropical Peatland	MTGLTVWQTDDCCPLCGDLLRARTQADGSITHECGCGWSVTWQADPEGGQW
Ga0187780_106807232	3300017973	Tropical Peatland	VNAPALWQTDDCCPLCGGLLLARIRADGSITEECGCGWSVTWQADPEGDPR
Ga0187780_110730601	3300017973	Tropical Peatland	MIAPMVWQTDDCCPLCGGLLCQRTQADGSVTQECGCGWSVTWQSDPEGGQ
Ga0187777_102274213	3300017974	Tropical Peatland	MNAPAMWQTDDCCPLCGGLLLARIRADGSITEECGCGWSVTWQADPEGDPR
Ga0187777_104812802	3300017974	Tropical Peatland	MNAPLWQTDDCCPLCGALLLQRTQADGSITEECGCGWSVTWQADPEGGP
Ga0187767_103456302	3300017999	Tropical Peatland	MTAPTVWLADECCPLYAGLLRARTQADGPVTEECGCGWSVTWQADPEGGP
Ga0187815_103047551	3300018001	Freshwater Sediment	DDCCPLCGGLLRQRTQADGSVTEECGCGWEITWHADPEGGDQ
Ga0187815_103736132	3300018001	Freshwater Sediment	MTDLTVWQTDDCCPSCGGLLRQRTQTDGSLTEECS
Ga0187784_110067831	3300018062	Tropical Peatland	MNVPVLWQTDDCCPSCGELLRQRIETDGSVTDECGCGWSVTWQADPD
Ga0187784_111590972	3300018062	Tropical Peatland	MADLTVWQTDDCCPLCGGLLWQRTQADGSTTQECGCGWQVTWQPDPEGGPS
Ga0187772_101108103	3300018085	Tropical Peatland	MNAPVLWQTDDCCLICGGLLRARTQVDGSITQECGCGWHMTWQADPEGGPW
Ga0187772_101279912	3300018085	Tropical Peatland	MNAPALWQTEDCCPSCGGLLWQRTQADGSITEECGCGWSVTWQADPEGGQW
Ga0187772_102276772	3300018085	Tropical Peatland	MTAPALWLTDDCCPSCGGLLWQRTQADGSITQECGCGWQVTWQPDPEGGQS
Ga0187772_105932912	3300018085	Tropical Peatland	MNVPVLWLTDDCCPLCGGLLRARTQADGSITHECGCGWSVTWQADPDEGGQW
Ga0187772_106827811	3300018085	Tropical Peatland	DCCPLCGGLLLARIRADGSITHECDCGWSITWQADPEGDPR
Ga0187772_107657062	3300018085	Tropical Peatland	MTAVTTWQTDDCCPSCGALLRQHVQADGPVTDECGCGWSITWQADRDGRGK
Ga0187772_108082161	3300018085	Tropical Peatland	TVWLTDDCCPLCGALLQARTQADGSITHECGCGWSVTWQADLEGGQW
Ga0187772_108232942	3300018085	Tropical Peatland	MTDLTVWQTDDCCPSCGELLRQRTQADGSITDECGCGWSVTWHAGLAGGDQ
Ga0187772_109929702	3300018085	Tropical Peatland	VNAPVLWQTDDCCPLCGALLLQRTQADGSITHACGCGWHVTWQAD
Ga0187772_110439321	3300018085	Tropical Peatland	MAELTVWQTDDCCPACGGLLQQRTEADGSLTDECGCGWSVTWHADRDGGDQ
Ga0187769_101102243	3300018086	Tropical Peatland	MTAPVLWLTDDCCPLCGGLLWQRTQADGSITQECGCGWQVTWQPDPEGGQS
Ga0187769_101476691	3300018086	Tropical Peatland	MADLTVWQTDDCCPTCGDLLRQRTEADGSLTQECGCGWSVTWQADLDGGEG
Ga0187769_104856902	3300018086	Tropical Peatland	MNAPALWQTDDCCPLCGALLLARIRADGSITHECGCGWSVTWQAGPEGDLQ
Ga0187769_110457592	3300018086	Tropical Peatland	MNPLTVWLTDDCCPLCGALLRAHTQADGSITEECGCGWHVTWQADPEGDQL
Ga0187769_113925392	3300018086	Tropical Peatland	MADLTVWQTDDCCPSCGDLLRQRTQADGSITEECGCGWSVTWHADPAGGDQ
Ga0187770_113824612	3300018090	Tropical Peatland	MADLTVWQTDDCCPSCGELLRQRTQADGSITQECGCGWHVTWQADPEGEPR
Ga0208199_10156042	3300027497	Peatlands Soil	MTEATLWLTDDCCPACGALLRQRIQADGPVTEECGCGWSVTWQASPDGGDQ
Ga0208042_11467202	3300027568	Peatlands Soil	LWLTDDCCPACGALLRQRIQADGPVTEECGCGWSVTWQASPDGGDQ
Ga0208043_11484522	3300027570	Peatlands Soil	MTEATLWLTDDCCPACGALLRQRIQADGPVTEECGCGWSVTWQ
Ga0209656_100208392	3300027812	Bog Forest Soil	MTEATLWQTDDCCPSCGCLLRQRIAADGSVTEECQCGWSVTWQASPDEGDQ
Ga0209166_106033842	3300027857	Surface Soil	MTALITWQTGDCCPSCGNLLHQRTEPDGSVTEACGCGWSLTWPADPAGGDQ
Ga0209579_103695582	3300027869	Surface Soil	MTTLTIWQTGDCCPSCGNLLRQHTDADGSVTETCDCGWKTTWHADPAGGDQ
Ga0308309_100553262	3300028906	Soil	MADLTLWQTDDCCPACGDLLRQRIHADRSVTEECGCGWSVTWQASPAGDEQ
Ga0318516_102046982	3300031543	Soil	MTAMTIWQTDDCCPACGALLRERIGADGSITQECGCGWSVTWQADPAGGEG
Ga0318516_105604032	3300031543	Soil	MTEATLWQTDDRCPSCGELLRQRTQDDGSITQDCDCGWEVTWQANPGGGDQ
Ga0318534_102629502	3300031544	Soil	MNALTVWLTDDCCPSCGGLMRARIQAEGSITEECGCGWHVTWQADQEGGQR
Ga0318534_102880613	3300031544	Soil	MTALTDWQTDDCCPLCGGLLRAGIQADGSLIQECGCGWSITWQADPEGGQW
Ga0318534_107608262	3300031544	Soil	QTDDCSSLSGGRVWARFQADGSLTQECGCGWYVAWAPDPDGDQR
Ga0318555_103107582	3300031640	Soil	MTALTDWQTDDCCPLCGGLLRAGIQADGSLIQECGCGWSITWQEASGEGRRAHSQA
Ga0318542_103133512	3300031668	Soil	MTALTIWQSDDCCPACGALLRERIGADGSIVQECGCGWIVTWQADTWTTGQAGG
Ga0318561_103694561	3300031679	Soil	MNALTVWLTDDCCPSCGGLMRARIQAEGSITEECGCGWHVTWQADQ
Ga0318572_102783652	3300031681	Soil	MSALTIWQTDDCCPSCGDLLQRRIQTGGSITQECGCGWSVTWQADPDGGEC
Ga0310686_1053723402	3300031708	Soil	MTETLWQTDDCCPACGALLRQRVQAAGSVTEECGCGWWVTWQTAPDAGER
Ga0310686_1184586782	3300031708	Soil	MTDLTVWQTDDCCPACGCLLRQHIQADGSDTQECGCGWSVTWQADPDGGER
Ga0318496_101470762	3300031713	Soil	MNAPVLWLTDNCFPLCDALLRTRDQADGPITHECGCGWSVTWQADPEGGQW
Ga0318496_104695492	3300031713	Soil	MTALTIWQTDDCCPGCGAPLREWTAVDGSITQECGCGWSITWQADPDGGDC
Ga0318500_102637272	3300031724	Soil	MTAASIWQTDDCCPSCGALLRERIAADGSITQECGCGWSVTWQADPDR
Ga0318502_102330072	3300031747	Soil	MTAASIWQTDDCCPSCGALLRERIAADGSITQECGCGWSVTWQADPDGGDC
Ga0318492_104889482	3300031748	Soil	MTEATLWQTDDCCPSCGCCLWHRIQADGSVTEECKCGWSVTWRADPDGGER
Ga0318494_101865332	3300031751	Soil	MTEATLWQTDDRCPSCGELLRQRTHADGSITQDCDCGWEVTWHADPGGGDQ
Ga0318494_108531801	3300031751	Soil	MTALTIWQTDDCCPGCGAPLREWTAVDGSITQECGCGWSITWQADPD
Ga0318546_110527471	3300031771	Soil	ARRGGGRMTALTDWQTDDCCPLCGGLLRAGIQADGSLIQECGCGWSITWQADPEGGQW
Ga0318547_108492442	3300031781	Soil	MGDLTLWQTDDCCPLCGQLLRQRTRADGSITQDCGCGWQVTWHADPDGGDGT
Ga0318529_105923802	3300031792	Soil	DCCPLCGALLRQRTEADGSITQECGCGWHVTWQADPEGGQW
Ga0318497_103144321	3300031805	Soil	AWTLWLTDDCCPLCGALLRQRTEADGSITQECGCGWHVTWQADPEGGQW
Ga0318551_109405732	3300031896	Soil	MSDLTVWQTDDCCPSCGNLLRQRTQADGSVTQECGCSWQVTWTA
Ga0318520_102782952	3300031897	Soil	MTAWTLWLTDDCCPLCGALLRQRTEADGSITQECGCGWHVTWQADPEGGQW
Ga0318520_105618381	3300031897	Soil	MTAMTIWQTDDCCPACGALLRERIGADGSITQECGCGWSVTWQADPDGGE
Ga0306926_110154032	3300031954	Soil	MNAGTLWQTDDCCPLCGGPLWQGTHADGSITQQCGCGWSVTWQADPEGDQW
Ga0306926_120125571	3300031954	Soil	MTALTIWQTDDCCPGCGAPLREWSAVDGSITQECGCGWSITWQADPDGGDC
Ga0318530_103154091	3300031959	Soil	MNAGTLWQTDDCCPLCGGPLWQGTHADGSITQQCGCGWSVTWQA
Ga0318569_103383032	3300032010	Soil	GRYRMTAMTIWQTDDCCPACGALLRERIGADGSITQECGCGWSVTWQADPAGGEG
Ga0318558_101521271	3300032044	Soil	AVARAGRRGRMTAWTLWLTDDCCPLCGALLRQRTEADGSITQECGCGWHVTWQADPEGGQ
Ga0318570_105896032	3300032054	Soil	MTAMTIWQTDDCCPACGALLRERIGADGSITQECGCGWSVTWQADPDGGEC
Ga0318575_106358651	3300032055	Soil	GRRGRMTAWTLWLTDDCCPLCGALLRQRTEADGSITQECGCGWHVTWQADPEGGQW
Ga0306924_111151902	3300032076	Soil	MTAPLWQTDDCCPPCGGLLRACTQADGSVTEECGCGWSATWQADAKGDPR
Ga0318525_104815722	3300032089	Soil	GDVGMSDLTVWQTDDCCPSCGNLLRQRTQADGSVTQECGCSWQVTWTADPDGGEW
Ga0318577_104358622	3300032091	Soil	MTEATLWQTDDRCPSCGELLRQRTQDDGSITQDCDCGWEVTWYADPGGGDQ
Ga0311301_101189842	3300032160	Peatlands Soil	MIATTVWQTDECCPRCGGLLSQRISADGSVNEECGCGWSVTWQADPDGVEQ
Ga0311301_124200102	3300032160	Peatlands Soil	MTEATVWQTDDCCPSCGGLLLQRILADGSVTEECGCGWSVTWQVHPGGGDR
Ga0311301_125181261	3300032160	Peatlands Soil	MTEAILWQTGDCCPSCGCLLRQRIQSDGSVTEECGCGWSVTWEA
Ga0311301_129520142	3300032160	Peatlands Soil	MADLTLWQTDDRCPACGDLVRQRIQADGSVTEECGCGWSVTWQAGPAGDEQ
Ga0306920_1003955702	3300032261	Soil	MTTLTVWQTDDCCPSCGELLRQRIQADGSMTQECGCGWAITWQANPDGGEC
Ga0306920_1032790782	3300032261	Soil	TVWQADDCCLRCGAQLWERIGADGAVTQECRCGWSVTWQADPDGGE
Ga0335078_101509936	3300032805	Soil	MNAVTIWLTDDCCPACGALLRARVQADGSLAQECGCGWSVIWAPDPAWGER
Ga0335074_100035382	3300032895	Soil	MADLTVWQTDDCCPSCGGLLRQRTQADGSVTDECGCGWEVTWYADPAGGDQ
Ga0335074_100773894	3300032895	Soil	MTSLTVWQTDDCCPSCGRLLRQRTHADGSITQECGCGWEVTWHADPEGSEQ
Ga0335074_102374932	3300032895	Soil	MTAPTTWQTDDCCPGCGALLRERITADGSITQECGCGWSVTWQAGTWATGQTGGDQ
Ga0318519_105458372	3300033290	Soil	MTALTIWQTDDCCPGCGALLWERIGADGSITHECRCGWSVTWQADTWTTDQTGGDP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060178

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences