Metagenome Family F060168

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060168
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	85 residues
Representative Sequence	MKKAFYKSKAFYGCVSTIVLIVGDMAANGANLGNMTALMTAGFALYGRIVATAPLAISDQSEADVEEAKADVRKSKVAVDADHGN
Number of Associated Samples	83
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.15 %
% of genes near scaffold ends (potentially truncated)	30.83 %
% of genes from short scaffolds (< 2000 bps)	81.95 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.406 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.579 % of family members)
Environment Ontology (ENVO)	Unclassified (40.602 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 61.06% β-sheet: 0.00% Coil/Unstructured: 38.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF09374	PG_binding_3	51.13
PF13384	HTH_23	9.77
PF01381	HTH_3	2.26
PF11985	Phage_Mu_Gp27	2.26
PF01408	GFO_IDH_MocA	0.75
PF03459	TOBE	0.75
PF02622	DUF179	0.75
PF01527	HTH_Tnp_1	0.75
PF13276	HTH_21	0.75
PF12704	MacB_PCD	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
All Organisms	root	All Organisms	37.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
cellular organisms	root	All Organisms → cellular organisms	37.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	23.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	23.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	23.31 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	23.31 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	23.31 %
Shewanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	23.31 %
unclassified Shewanella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → unclassified Shewanella	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.41 %
bacterium CG_4_9_14_3_um_filter_65_15	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	23.31 %
Shewanella sp. SG41-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → unclassified Shewanella → Shewanella sp. SG41-3	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001385\|JGI20193J14888_1013172	Not Available	1585	Open in IMG/M
3300001397\|JGI20177J14857_1003580	All Organisms → cellular organisms → Bacteria	3684	Open in IMG/M
3300001402\|JGI20195J14853_1052039	Not Available	518	Open in IMG/M
3300001412\|JGI20173J14856_1001869	All Organisms → cellular organisms → Bacteria	5017	Open in IMG/M
3300001471\|JGI12712J15308_10108404	Not Available	706	Open in IMG/M
3300001593\|JGI12635J15846_10648363	Not Available	611	Open in IMG/M
3300004080\|Ga0062385_10015387	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	2741	Open in IMG/M
3300004080\|Ga0062385_10543300	Not Available	725	Open in IMG/M
3300004082\|Ga0062384_100318856	Not Available	972	Open in IMG/M
3300004082\|Ga0062384_101177147	Not Available	556	Open in IMG/M
3300004091\|Ga0062387_100565716	Not Available	808	Open in IMG/M
3300004091\|Ga0062387_101645144	Not Available	520	Open in IMG/M
3300004092\|Ga0062389_100099870	Not Available	2564	Open in IMG/M
3300004092\|Ga0062389_100596113	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300004092\|Ga0062389_101961120	Not Available	763	Open in IMG/M
3300004092\|Ga0062389_104586190	Not Available	520	Open in IMG/M
3300004635\|Ga0062388_101288250	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	728	Open in IMG/M
3300005538\|Ga0070731_10012886	All Organisms → cellular organisms → Bacteria → Proteobacteria	6054	Open in IMG/M
3300006055\|Ga0097691_1001428	All Organisms → cellular organisms → Bacteria	17650	Open in IMG/M
3300006176\|Ga0070765_100171942	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300006176\|Ga0070765_100948878	Not Available	813	Open in IMG/M
3300010341\|Ga0074045_10889535	Not Available	562	Open in IMG/M
3300010343\|Ga0074044_10045452	Not Available	3035	Open in IMG/M
3300010343\|Ga0074044_10579405	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	732	Open in IMG/M
3300010379\|Ga0136449_101715206	Not Available	946	Open in IMG/M
3300010379\|Ga0136449_101722347	Not Available	943	Open in IMG/M
3300012202\|Ga0137363_11013641	Not Available	705	Open in IMG/M
3300012361\|Ga0137360_11089650	Not Available	690	Open in IMG/M
3300012924\|Ga0137413_10874441	Not Available	696	Open in IMG/M
3300014152\|Ga0181533_1018022	Not Available	4701	Open in IMG/M
3300014169\|Ga0181531_10436936	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	806	Open in IMG/M
3300014201\|Ga0181537_10060391	Not Available	2569	Open in IMG/M
3300014501\|Ga0182024_10074072	Not Available	5128	Open in IMG/M
3300014501\|Ga0182024_11747395	Not Available	698	Open in IMG/M
3300014501\|Ga0182024_12455341	Not Available	563	Open in IMG/M
3300017823\|Ga0187818_10390038	Not Available	618	Open in IMG/M
3300017933\|Ga0187801_10389373	Not Available	578	Open in IMG/M
3300017934\|Ga0187803_10018320	All Organisms → cellular organisms → Bacteria → Proteobacteria	2793	Open in IMG/M
3300017943\|Ga0187819_10082679	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1917	Open in IMG/M
3300017946\|Ga0187879_10000191	All Organisms → cellular organisms → Bacteria	44442	Open in IMG/M
3300018042\|Ga0187871_10610538	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300018047\|Ga0187859_10783837	Not Available	546	Open in IMG/M
3300018057\|Ga0187858_10191832	Not Available	1338	Open in IMG/M
3300019786\|Ga0182025_1045048	Not Available	936	Open in IMG/M
3300019786\|Ga0182025_1186294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → unclassified Shewanella → Shewanella sp. SG41-3	1726	Open in IMG/M
3300020579\|Ga0210407_10249219	Not Available	1384	Open in IMG/M
3300020579\|Ga0210407_10272639	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1320	Open in IMG/M
3300020579\|Ga0210407_11014054	Not Available	632	Open in IMG/M
3300020579\|Ga0210407_11060922	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	616	Open in IMG/M
3300020583\|Ga0210401_10073954	All Organisms → cellular organisms → Bacteria → Proteobacteria	3209	Open in IMG/M
3300020583\|Ga0210401_11360729	Not Available	568	Open in IMG/M
3300020583\|Ga0210401_11559025	Not Available	518	Open in IMG/M
3300021168\|Ga0210406_10505624	Not Available	955	Open in IMG/M
3300021170\|Ga0210400_10458627	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1052	Open in IMG/M
3300021170\|Ga0210400_10740556	Not Available	807	Open in IMG/M
3300021171\|Ga0210405_10194634	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1607	Open in IMG/M
3300021171\|Ga0210405_11126352	Not Available	585	Open in IMG/M
3300021178\|Ga0210408_10496270	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	971	Open in IMG/M
3300021178\|Ga0210408_11453702	Not Available	515	Open in IMG/M
3300021180\|Ga0210396_10479053	Not Available	1090	Open in IMG/M
3300021180\|Ga0210396_11382341	Not Available	583	Open in IMG/M
3300021181\|Ga0210388_10578646	Not Available	983	Open in IMG/M
3300021401\|Ga0210393_10012154	All Organisms → cellular organisms → Bacteria	6702	Open in IMG/M
3300021401\|Ga0210393_10983006	Not Available	684	Open in IMG/M
3300021405\|Ga0210387_10485184	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1098	Open in IMG/M
3300021406\|Ga0210386_10473041	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1083	Open in IMG/M
3300021407\|Ga0210383_11699433	Not Available	517	Open in IMG/M
3300021420\|Ga0210394_10190679	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1787	Open in IMG/M
3300021420\|Ga0210394_10841382	Not Available	800	Open in IMG/M
3300021420\|Ga0210394_10930520	Not Available	755	Open in IMG/M
3300021420\|Ga0210394_11295982	Not Available	622	Open in IMG/M
3300021432\|Ga0210384_10103947	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	2548	Open in IMG/M
3300021432\|Ga0210384_10239847	Not Available	1632	Open in IMG/M
3300021432\|Ga0210384_10244773	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1614	Open in IMG/M
3300021432\|Ga0210384_10758376	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	867	Open in IMG/M
3300021433\|Ga0210391_10400826	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1077	Open in IMG/M
3300021433\|Ga0210391_11191692	Not Available	590	Open in IMG/M
3300021474\|Ga0210390_11012086	Not Available	679	Open in IMG/M
3300021477\|Ga0210398_10904060	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	707	Open in IMG/M
3300021477\|Ga0210398_11220270	Not Available	594	Open in IMG/M
3300021478\|Ga0210402_11579019	Not Available	583	Open in IMG/M
3300021479\|Ga0210410_10300814	Not Available	1440	Open in IMG/M
3300021479\|Ga0210410_10428728	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1184	Open in IMG/M
3300021559\|Ga0210409_10386118	Not Available	1255	Open in IMG/M
3300021559\|Ga0210409_10542459	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1029	Open in IMG/M
3300021559\|Ga0210409_11446636	Not Available	563	Open in IMG/M
3300021559\|Ga0210409_11720932	Not Available	504	Open in IMG/M
3300025457\|Ga0208850_1001876	All Organisms → cellular organisms → Bacteria → Proteobacteria	5364	Open in IMG/M
3300025581\|Ga0208355_1008193	All Organisms → cellular organisms → Bacteria	3646	Open in IMG/M
3300026557\|Ga0179587_10715484	Not Available	660	Open in IMG/M
3300026557\|Ga0179587_11148872	Not Available	511	Open in IMG/M
3300027729\|Ga0209248_10145253	Not Available	708	Open in IMG/M
3300027737\|Ga0209038_10190932	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	619	Open in IMG/M
3300027767\|Ga0209655_10099215	Not Available	969	Open in IMG/M
3300027768\|Ga0209772_10239371	Not Available	576	Open in IMG/M
3300027795\|Ga0209139_10138572	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	860	Open in IMG/M
3300027829\|Ga0209773_10076068	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1375	Open in IMG/M
3300027869\|Ga0209579_10008779	All Organisms → cellular organisms → Bacteria → Proteobacteria	6358	Open in IMG/M
3300027884\|Ga0209275_10739822	Not Available	567	Open in IMG/M
3300027889\|Ga0209380_10651830	Not Available	607	Open in IMG/M
3300027895\|Ga0209624_10578145	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300027908\|Ga0209006_10054714	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	3581	Open in IMG/M
3300027908\|Ga0209006_10886581	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	717	Open in IMG/M
3300028747\|Ga0302219_10205859	Not Available	759	Open in IMG/M
3300028906\|Ga0308309_10381774	Not Available	1205	Open in IMG/M
3300029999\|Ga0311339_10175216	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	2472	Open in IMG/M
3300030053\|Ga0302177_10105257	Not Available	1629	Open in IMG/M
3300030520\|Ga0311372_12047922	Not Available	668	Open in IMG/M
3300030617\|Ga0311356_10588442	Not Available	1078	Open in IMG/M
3300031057\|Ga0170834_104563206	Not Available	620	Open in IMG/M
3300031128\|Ga0170823_14563424	Not Available	620	Open in IMG/M
3300031231\|Ga0170824_121211703	Not Available	575	Open in IMG/M
3300031233\|Ga0302307_10075109	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1779	Open in IMG/M
3300031708\|Ga0310686_100845283	Not Available	1405	Open in IMG/M
3300031708\|Ga0310686_101252174	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	1827	Open in IMG/M
3300031708\|Ga0310686_103251707	All Organisms → cellular organisms → Bacteria	12426	Open in IMG/M
3300031708\|Ga0310686_108207152	All Organisms → cellular organisms → Bacteria	5913	Open in IMG/M
3300031718\|Ga0307474_10319189	Not Available	1199	Open in IMG/M
3300031718\|Ga0307474_10466630	Not Available	988	Open in IMG/M
3300031718\|Ga0307474_11382277	Not Available	555	Open in IMG/M
3300031718\|Ga0307474_11398698	Not Available	551	Open in IMG/M
3300031754\|Ga0307475_10489301	Not Available	988	Open in IMG/M
3300031754\|Ga0307475_11365893	Not Available	547	Open in IMG/M
3300031823\|Ga0307478_10048130	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	3153	Open in IMG/M
3300031823\|Ga0307478_10079150	All Organisms → cellular organisms → Bacteria → Proteobacteria	2504	Open in IMG/M
3300031823\|Ga0307478_10781175	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	800	Open in IMG/M
3300031823\|Ga0307478_10834694	Not Available	771	Open in IMG/M
3300031823\|Ga0307478_11146431	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium CG_4_9_14_3_um_filter_65_15	648	Open in IMG/M
3300031823\|Ga0307478_11612059	Not Available	536	Open in IMG/M
3300031823\|Ga0307478_11814704	Not Available	501	Open in IMG/M
3300031962\|Ga0307479_10244000	Not Available	1773	Open in IMG/M
3300031962\|Ga0307479_11308440	Not Available	686	Open in IMG/M
3300032160\|Ga0311301_12981582	Not Available	510	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.95%
Aquatic	Environmental → Aquatic	21.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.44%
Freshwater	Environmental → Aquatic → Freshwater	21.05%
Peat	Environmental → Terrestrial → Peat	4.51%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.05%
Loam	Environmental → Terrestrial → Soil → Loam	7.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.51%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.51%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.58%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	12.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.28%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.26%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.01%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.01%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.26%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.26%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.50%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300001397	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300001412	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20193J14888_10131724	3300001385	Arctic Peat Soil	AFYGGVSGIVLIVGDMVSNGVSIGNISALAATAFALYGRIVATAPLGISDQSEADVEQAKADVRKSTAKVDADHGN*
JGI20177J14857_10035806	3300001397	Arctic Peat Soil	VTKKGFWKSKAFYGGVSGIVLIVGDMVSNGVSIGNISALAATAFALYGRIVATAPLGISDQSEADVEQAKADVRKSTAKVDADHGN*
JGI20195J14853_10520391	3300001402	Arctic Peat Soil	VTKKAFWKSKAFYGGVSGIVLIVGDMVSNGVSIGNISALAATAFALYGRIVATAPLGISDQSEADVEQAKADVRKS
JGI20173J14856_10018691	3300001412	Arctic Peat Soil	VTKKAFWKSKAFYGGVSGIVLIVGDMVSNGVSIGNISALAATAFALYGRIVATAPLGISDQSEADVEQAKADVRKSTAKVDAD
JGI12712J15308_101084042	3300001471	Forest Soil	VTKKAFYKSKGFYGCVSTIVLIVGDIAANGVTVGNLFALMTAGFALYGRIVATAPLVLSDQSENDVEEARADVRKSKVTVDADRGQ*
JGI12635J15846_106483632	3300001593	Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNMTALMTAGFALYGRIVASAPLAMSDQSEADVEDAKADVRKSKVAVDADQGN*
Ga0062385_100153875	3300004080	Bog Forest Soil	VTKKAFYKSKAFYGCVSTIVLIAGDMAANGVTAANMMALMTAGFALYGRIVATAPLALSDESEAAVEEARTDARKSNRAVDADRGD*
Ga0062385_105433001	3300004080	Bog Forest Soil	RGNMNTKAFYKSKAFYGCVSTIILIVGDMASSGVTVGNMTALMTAGFALYGRIVATAPLSLSDQAGEARADVRKSKVAVDADRGN*
Ga0062384_1003188562	3300004082	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNMTALMTAGLALYGRVVASAPLALSDQSEADVEDAKADVRKSKVAVDADLGN*
Ga0062384_1011771471	3300004082	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIILIVGDMASSGVTVGNMTALMTAGFALYGRIVATAPLSLSDQAGEARADVRKSKVAVDADRGN*
Ga0062387_1005657162	3300004091	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNTTALMTAGFALYGRIVASAPLAMSDQSEADVEAAKADVRKSKVAVDADQGN*
Ga0062387_1016451442	3300004091	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNMTALMTAGLALYGRVVASAPLALSDQSEADVEDAKADVRKSKVAVD
Ga0062389_1000998703	3300004092	Bog Forest Soil	MKKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNLTALMTAGFALYGRIVATAPLAISGQSEADVEEAKADVRKSKIAVDADHGN*
Ga0062389_1005961133	3300004092	Bog Forest Soil	MTQEVSQVTKKAFYRSKAFYGCVSTIVLIVGDIAANGATIGNMTALMTAGFALYGRVVATAPLALSDQSETDVEEARADVRKNRIPVDADRGQ*
Ga0062389_1019611202	3300004092	Bog Forest Soil	VTKKAFYRSKAFYGGVSTIVLIVGDMAANGVTAGNMMALMTAGFALYGRIVATAPLAISDQSETDVEDAKADVRKSNKTVDADTGD*
Ga0062389_1045861902	3300004092	Bog Forest Soil	MPRARGFVTTKAFYKSKAFYGCVSTIVLIVGDIASNGVSLGNVTALMSAGLALYGRIVATAPLAVSDQSENDVEEARADVRKSNVPVDADHGD*
Ga0062388_1012882502	3300004635	Bog Forest Soil	MTQEVSQVTKKAFYRSKAFYGCVSTIVLIVGDIAANGATIGNMTALMTAGFALYGRVVATAPLALSDQSETDVEEA
Ga0070731_100128869	3300005538	Surface Soil	MNSRKVFYKSKGFYGCVSTIVLIVGDMASNGVSIGNMTALMTAGFALYGRIVATAPLAVSDQSESDVEDAKSDVRKSKVAVDADRGQ*
Ga0097691_100142819	3300006055	Arctic Peat Soil	VTKKAFWKSKAFYGGVSGIVLIVGDMVSNGVSIGNISALAATAFALYGRIVATAPLGISDQSEADVEQAKADVRKSTAKVDADHGN*
Ga0070765_1001719424	3300006176	Soil	MNTKKVFYKSKGFYGCVSTIVLIVGDMAANGVTVGGMVALMTAGFALYGRIVATAPLAISDQSEADVEEAKADVRKSKVPISADHGN*
Ga0070765_1009488783	3300006176	Soil	MAEPRVRVTQEVSQVTTKAFYRSKGFYGCVSTIVLIVGDMAANGVTVGSLFALMTAGFALYGRIVATAQLAISDQSETDVEDAKADVRKSKVPVDADRGQ*
Ga0074045_108895352	3300010341	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDIVVNGVTLGNMTALMTAGFALYGRVVATAPLAISDRSEADVEDAKADVRKSDKPVDADHGD*
Ga0074044_100454525	3300010343	Bog Forest Soil	MNTDKSAKVFYKSKAFYGCVSTIVLIVGDIVVNGMTLGNMTALMTAGFALYGRVVATAPLAISDRSEADVEDAKADVRKSDKPVDADHGN*
Ga0074044_105794052	3300010343	Bog Forest Soil	LVTKKAFYKSKAFYGCVSTIVLIAGDMAANGVTAANMMALMTAGFALYGRIVATAPLALSDES
Ga0136449_1017152063	3300010379	Peatlands Soil	MKREVSQVTKKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNLTALMTAGFALYGRIVATAPLAISDQSEADVEEAKADVRKSKIAVDADRGQ*
Ga0136449_1017223472	3300010379	Peatlands Soil	MNTDKSAKVFYKSKAFYGCVSTIVLIVGDIVVNGVTLGNMTALMTAGFALYGRVVATAPLAISDRSEADVEDAKADVRKSDKPVDADHGN*
Ga0137363_110136411	3300012202	Vadose Zone Soil	VDTEKVKKAFYKSKSFYGCVSTIVLIVGDMAANGATLGNMTALMTAGFALYGRIVATAPLAITDQSETDVEEAKADVRKSKVAVDADHGN*
Ga0137360_110896501	3300012361	Vadose Zone Soil	VDTEKVKKAFYKSKSFYGCVSTIVLIVGDIASNGATLGNTTALMTAGFALYGRIVATAPLAITDQSEADVEEAKADVRKSKVAVDADRGD*
Ga0137413_108744411	3300012924	Vadose Zone Soil	MNTKKLFYKSKAFWGCVSTIVLIVGDIASNGASFANMSALMTAGFALYGRIVATAPLAISDQSETDVEEARAD
Ga0181533_10180224	3300014152	Bog	VKKAFWKSKAFYGGVSGIVLIVGDMVANGVSIGNISALAAAAFALYGRIVATAPLSVSDQSEVGVEQAKKGCARE*
Ga0181531_104369362	3300014169	Bog	MDTKKAFYKSKAFYGCVSTIVLIIGDIVANGVNLGNMTALITTGFALYGRIVATTPLGLSDQSEDDVEDAKADV
Ga0181537_100603912	3300014201	Bog	MDTKKAFYKSKAFYGCVSTIVLIIGDIVANGVNLGNMTALITTGFALYGRIVATTPLGLSDQSEDDVEDAKADVRKSTVAVDADHGN*
Ga0182024_100740723	3300014501	Permafrost	MRKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNMTALMAAGFALYGRIVATAPLAISDQSEADVEEAKADVRKSKIAVDADRGQ*
Ga0182024_117473952	3300014501	Permafrost	LYQGMAQPRLRVRNMNTETKAFYRSKTFYGCVSTIVLIIGDMAANGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKADVRKSKVPVDADHGN*
Ga0182024_124553412	3300014501	Permafrost	YQGMAQPRLRVRNMNTETKAFYRSKTFYGCVSTIVLIIGDMAANGATMANMMALMTAGFALYGRIVATAPLALSDQSEIDVEDAKADVRKSKISIDADHGN*
Ga0187818_103900382	3300017823	Freshwater Sediment	MRDAHMDMNTEKNSKAFYKSKAFYGCVSTIVLIVGDMAVNGVNLGNISALAAAAFALYGRIVATAPLGVSDQSEADVEQAKADVRRSNAKVDADHGN
Ga0187801_103893732	3300017933	Freshwater Sediment	MRDAHMDMNTEKNSKAFYKSKAFYGCVSTIVLIVGDMAVNGVNLGNISALAAAAFALYGRIVATAPLGVSDQSETDVEQAKADVRRSNAKVDADHGN
Ga0187803_100183202	3300017934	Freshwater Sediment	VKKAFYKSKAFYGCVSTIVLIVGDIVANGVTIGNMTALMTAGFALYGRIVATAPLAISDQSEADVEAAKADVRRSEKKVDADHGN
Ga0187819_100826795	3300017943	Freshwater Sediment	MRDAHMDMNTEKNSKAFYKSKAFYGCVSTIVLIVGDMAVNGVNLGNISALAAAAFALYGRIVATAPLGVS
Ga0187879_1000019113	3300017946	Peatland	MNTDKSAKVFYKSKAFYGCVSTIVLIVGDIVVNGVTLGNMTALMTAGFALYGRVVATAPLAISDRSEADVEDAKADVRKSDKPVDADHGN
Ga0187871_106105382	3300018042	Peatland	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNMTALMTAGFALYGRIVASAPLAMSDQSEADVE
Ga0187859_107838371	3300018047	Peatland	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNMTALMTAGFALYGRIVASAPLAMSDQSEADVEDAKADVRKSKVAVDADQGN
Ga0187858_101918321	3300018057	Peatland	TDKSAKVFYKSKAFYGCVSTIVLIVGDIVVNGVTLGNMTALMTAGFALYGRVVATAPLAISDRSEADVEDAKADVRKSDKPVDADHGN
Ga0182025_10450482	3300019786	Permafrost	MRKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNMTALMAAGFALYGRIVATAPLAISDQSEADVEEAKADVRKSKIAVDADRGQ
Ga0182025_11862943	3300019786	Permafrost	MNTDKKAFYKSKAFYGCVSTIVLIIGDMAANGATMANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKADVRKSKVPVDADHGN
Ga0210407_102492194	3300020579	Soil	IRNMNTERKAFYRSKTFYGCVSTIVLIIGDMAANGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKSDVRKSKIAVDADHGD
Ga0210407_102726391	3300020579	Soil	LKKAFYKSKAFWGCVSTIVLIAGDIASNGVTLGSMMALTTAGLALYGRIVATAPLAISDQSETEV
Ga0210407_110140542	3300020579	Soil	MKKAFYKSKTFYGCVSTIVLIIGDMASNGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKADVRKSKVAIDADHGN
Ga0210407_110609221	3300020579	Soil	MNTDKKAFYRSKTFYGCVSTIVLIIGDMAANGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVE
Ga0210401_100739546	3300020583	Soil	VTKKVFYKSKGFYGCVSTMVLIVGDMAANGVTVGNMFALMTAGFALYGRIVATAPLAVSDQSENDVEEARADVRKSKVAVDADRGQ
Ga0210401_113607292	3300020583	Soil	MTNMNTEKKAFWKSKAFYGCVSTIVLIIGDMAANGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKADVRKSKIAVDADRGN
Ga0210401_115590252	3300020583	Soil	KVFYKSKGFYGCVSTIVLIVGDMATNGVTVGNMMALMTAGLALYGRIVATAPLAVSDQSENDVEDAKADVRKSKVSVDADHGN
Ga0210406_105056242	3300021168	Soil	MNTDKKAFYRSKTFYGCVSTIVLIIGDMAANGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKSDVRKSKVAVDADHGN
Ga0210400_104586272	3300021170	Soil	VTKKVFYKSKGFYGCVSTIVLIVGDMAANGVTVGNMFALMTAGFALYGRIVATAPLAVSDQSEADVEDAKADVRKSKVSVDADRGQG
Ga0210400_107405562	3300021170	Soil	MRKTFYRSKAFWGCVSTIVLIVGDMAGNGVTLGNMMALTTAGFALYGRIVATAPLSVSDRSEADVEEAKADVRKSKISVDADRGN
Ga0210405_101946342	3300021171	Soil	MRKAFWKSKAFYGCVSTIVLIIGDMAANGATLANMMALMTAGFAVYGRIVATAPLAFSDQSETDVEDAKADVRKSKVAIDADRGN
Ga0210405_111263522	3300021171	Soil	VTTKAFYRSKGFYGCVSTIVFIVGDMAANGVTVGSLFALMTAGFALYGRIVATAQLAISDQSETD
Ga0210408_104962702	3300021178	Soil	VTKKVFYKSKGFYGCVSTIVLIVGDMAANGVTVGSLFALMTAGFALYGRIVATAPLAISDQSEADVEDAKADVRKSKVPVDADRGQ
Ga0210408_114537022	3300021178	Soil	LKKAFYRSKAFWGCVSTIVLIVGDMAGNGVTVGNMMALTTAGFALYGRIVATAPLSVSDQSEADVEEAKADVRKSKISVDADHGN
Ga0210396_104790531	3300021180	Soil	LRKAFYRSKAFWGCVSTIVLIVGDMAGNGVTLGNMMALTTAGFALYGRIVATAPLSVSDQSEADVEE
Ga0210396_113823412	3300021180	Soil	MAQPRIRVTQEVSQVTGKVFYKSKGFYGCVSTIVLIVGDMAANGVTVGNMMALMTAGLALYGRIVATAPLAVSDQSENDVEDAKADVRKSKVSVDADHGN
Ga0210388_105786463	3300021181	Soil	MKKAFYRSKAFWGCVSTIVLIVGDMAGNGMTLGNMMALTTAGFALYGRIVATAPLSVSDQSEADVEEAKADVRKSKTVADADHGN
Ga0210393_100121546	3300021401	Soil	MTGVVSCFHARAERPNRYLKKAFYRSKAFWGCVSTIVLIVGDMAANGVTLGNMMALTTAGFALYGRIVATAPLSITDQSEADVEEARADVRKSKVPVSADHGN
Ga0210393_109830062	3300021401	Soil	MKKAFYKSKTFYGCVSTIVLIIGDMASNGATLANMMALMTAAFALYGRIVATAPLALSDQSETDVEDAKADVRKSKVAVDADHGQG
Ga0210387_104851842	3300021405	Soil	MRKAFYRSKAFWGCVSTIVLIVGDMAANGVTLGNMMALTTAGFALYGRIVATAPLSITDQSEADVEEARADVRKSKATVNADHGN
Ga0210386_104730413	3300021406	Soil	VRKAFYRSKTFYGCVSTIVLIIGDMAANGATLANMMALMTAAFALYGRIVATAPLALSDQSEADVEDAKSDVRKSKVAVDA
Ga0210383_116994331	3300021407	Soil	MRKAFYRSKAFWGCVSTIVLIVGDMAGNGVTLGNMMALTTAGFALYGRIVATAPLSVSDQSEADVEEAKADVRKSK
Ga0210394_101906794	3300021420	Soil	VKKAFWKSKTFYGCVSTIVLIIGDMASNGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDA
Ga0210394_108413823	3300021420	Soil	VKKAFYKSKAFYGCVSTIVLIVGDMAANGANLGNMTALVTAGFALYGRIVATAPLAISDHSEADVEEAKADVRKSKVAVDADHGN
Ga0210394_109305202	3300021420	Soil	MNQKAFYKSKAFYGCVSTIILIVGDMAANGVSIGNMTALMTAGFALYGRIVATAPLGTSDIAAASEADVENAKADVRKSSSKVDADHGN
Ga0210394_112959822	3300021420	Soil	MKKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNLTALMTAGFALYGRIVATAPLAISDQSEADVEEAKADVRKSKIAVDADRGQ
Ga0210384_101039473	3300021432	Soil	VTTKAFYRSKGFYGCVSTIVLIVGDMAANGVTVGSLFALMTAGFALYGRIVATAPLAISDQSETDVEDAKADVRKSKVPVDADRGQ
Ga0210384_102398475	3300021432	Soil	TEKVKKAFYKSKAFWGCVSTIVLIAGDIASNGVTLGSMMALTTAGLALYGRIVATAPLAISDQSETDVEEARADVRKSKVAVDADHGN
Ga0210384_102447732	3300021432	Soil	MAESCVCVTKEVSWLTKKVFYKSKGFYGCVSTIVLIVGDMAANGVTVGNMFALMTAGFALYGRIVATAPLAVSDQSEADVEDAKADVRKSKVSVDADRGQG
Ga0210384_107583762	3300021432	Soil	MNTEKKAFYKSKAFYGCVSTIVLIIGDMAANGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKSDVRKSKIAVDADRGN
Ga0210391_104008262	3300021433	Soil	MNTKAFYKSKAFYGCISTIVLIVGDMAANGVTLGNTTALMTAGFALYGRVVASAPLALSDQSEADVEEAKADVRKSKVAVDADQGN
Ga0210391_111916922	3300021433	Soil	MAEPRLRVKQEVSQVTGKAFYKSKAFWGCVSTIVLIVGDMAGNGVTLGNMMALTTAGFALYGRIVATAPLSVSDQSEADVEEAKADVRKSKISVDADHGN
Ga0210390_110120862	3300021474	Soil	VKKAFWKSKTFYGCVSTIVLIIGDMAANGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKADVRKSKIAVDADHGN
Ga0210398_109040602	3300021477	Soil	VTGKAFYKSKAFWGCVSTIVLIVGDMAGNGVTLGNMMALTTAGFALYGRIVATAPLSVTDQSEAD
Ga0210398_112202701	3300021477	Soil	AFWGCVSTIVLIVGDMAGNGVTLGNMMALTTAGFALYGRIVATAPLSVSDQSEADVEEAKADVRKSKISVDADRGQ
Ga0210402_115790192	3300021478	Soil	LKKAFYKSKAFYGCVSTIVLIVGDMAGNGVTLGNMMALTTAGFALYGRIVATAPLSVSDQSEADVEEAKADVRKSKIAVDADR
Ga0210410_103008143	3300021479	Soil	MAEPRLRVKQEVSQVTGKAFYKSKAFWGCVSTIVLIVGDMAGNGVTLGNMMALTTAGFALYGRIVATAPLSVSDLSEADVEEAKADVRKSKVSVDADRGN
Ga0210410_104287283	3300021479	Soil	MNTEKKAFYKSKAFYGCVSTIVLIIGDMAANGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKADVRKSKIAVDADRGN
Ga0210409_103861183	3300021559	Soil	VTGKAFYKSKAFWGCVSTIVLIVGDMAGNGVTLGNMMALTTAGFALYGRIVATAPLSVSDQSEADVEEAKADVRKSKISVDADHGN
Ga0210409_105424593	3300021559	Soil	MTRGCGGAVKKEMSTTKAFYKSKAFWGCVSTIVLIAGDIASNGVTLGSMMALTTAGLALYGRIVATAPLAISDQSETEVEEARADVRKSKVAVDADHGQG
Ga0210409_114466362	3300021559	Soil	VTGKVFYKSKGFYGCVSTIVLIVGDMAANGVTVGNMMALMTAGLALYGRIVATAPLAVSDQSENDVEDAKADVRKSKVSVDADHGN
Ga0210409_117209321	3300021559	Soil	MTNMNTEKKAFWKSKAFYGCVSTIVLIIGDMAANGATLANMMALMTACFALYGRIVATAPLALSDQSETDVEDAKADVRKSKIAVDA
Ga0208850_10018767	3300025457	Arctic Peat Soil	VTKKAFWKSKAFYGGVSGIVLIVGDMVSNGVSIGNISALAATAFALYGRIVATAPLGISDQSEADVEQAKADVRKSTAKVDADHGN
Ga0208355_10081932	3300025581	Arctic Peat Soil	VTKKGFWKSKAFYGGVSGIVLIVGDMVSNGVSIGNISALAATAFALYGRIVATAPLGISDQSEADVEQAKADVRKSTAKVDADHGN
Ga0179587_107154842	3300026557	Vadose Zone Soil	MTWVFRGLHARKVRARVDTEKVKKAFYKSKSFYGCVSTIVLIIGDMAANGATFGNMTALMTAGFALYGRIVATAPLAITDQSETDVEEAKADVRKSKVAVDADRGD
Ga0179587_111488722	3300026557	Vadose Zone Soil	MNSKKLFYKSKAFWGCVSTIVLIVGDIASNGASFGNMSALMTAGFALYGRIVATAPLSISDQSETDVEEARADVRKSKVPVDADRGN
Ga0209248_101452532	3300027729	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIILIVGDMASSGVTVGNMTALMTAGFALYGRIVATAPLSLSDQAGEARADVRKSKVAVDADRGN
Ga0209038_101909321	3300027737	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNTTALMTAGFALYGRIVASAPLSMSDQSEADVEAA
Ga0209655_100992153	3300027767	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNTTALMTAGFALYGRIVASAPLSMSDQSEADVEAAKADVRKSKVAVDADQGN
Ga0209772_102393712	3300027768	Bog Forest Soil	VTKKAFYKSKAFYGCVSTIVLIAGDMAANGVTLGNTTALMTAGFALYGRIVASAPLAMSDQSEADVEAAKADVRKSKVAVDADQGN
Ga0209139_101385723	3300027795	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNTTALMTAGFALYGRIVASAPLSMSDQSEADVEAAKADVRK
Ga0209773_100760681	3300027829	Bog Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNTTALMTAGFALYGRIVASAPLAMSDQSEADV
Ga0209579_100087793	3300027869	Surface Soil	MNSRKVFYKSKGFYGCVSTIVLIVGDMASNGVSIGNMTALMTAGFALYGRIVATAPLAVSDQSESDVEDAKSDVRKSKVAVDADRGQ
Ga0209275_107398222	3300027884	Soil	MAEPRVRVTQEVSQVTTKAFYRSKGFYGCVSTIVLIVGDMAANGVTVGSLFALMTAGFALYGRIVATAPLAISDQSEADVEDAKADVRKSKVPISADHGN
Ga0209380_106518302	3300027889	Soil	VTTKAFYRSKGFYGCVSTIVLIVGDMAANGVTVGSMIALMTAGLALYGRIVATAPLAISDQSEADVEDAKADVRKSKVPISADHGN
Ga0209624_105781452	3300027895	Forest Soil	MNTKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNMTALMTAGFALYGRIVASAPLAMSDQSEADVEDAKADVRKSKVAVDADRGD
Ga0209006_100547145	3300027908	Forest Soil	VTKKAFYKSKGFYGCVSTIVLIVGDIAANGVTVGNLFALMTAGFALYGRIVATAPLVLSDQSENDVEEARADVRKSKVTVDADRGQ
Ga0209006_108865812	3300027908	Forest Soil	VTKKAFYRSKAFYGGVSTMVLIVGDMAANGVSIGSMIALMTAGFALYGRIVATAPLAVSDQSENDVEEARAD
Ga0302219_102058592	3300028747	Palsa	MDTKKAFYKSKAFYGCVSTIVLIIGDIVANGVNLGNMTALITTGFALYGRIVATTPLGLSDQSEDDVEDAKADVRKSTVAVDADHGN
Ga0308309_103817742	3300028906	Soil	VTTKAFYRSKGFYGCVSTIVLIVGDMAANGVTVGSLFALMTAGFALYGRIVATAQLAISDQSETDVEDAKADVRKSKVPVDADRGQ
Ga0311339_101752164	3300029999	Palsa	MDTKKAFYKSKAFYGCVSTIVLIIGDIVANGVNLGNMTALITTGFALYGRIVATTPLGLSDQSENDVEDAKADVRKSTVAVDADHGN
Ga0302177_101052574	3300030053	Palsa	MDTKKAFYKSKAFYGCVSTIVLIVGDIVANGVNLGNMTALITTGFALYGRIVATTPLGLSDQSEDDVEDAKADVRKSTVAVDADHGN
Ga0311372_120479221	3300030520	Palsa	MDTKKAFYKSKAFYGCVSTIVLIIGDIVANGVNLGNMTALITTGFALYGRIVATTPLGLSDQSEDDVEDA
Ga0311356_105884424	3300030617	Palsa	TKKAFYKSKAFYGCVSTIVLIIGDIVANGVNLGNMTALITTGFALYGRIVATTPLGLSDQSENDVEDAKADVRKSTVAVDADHGN
Ga0170834_1045632062	3300031057	Forest Soil	MTKAFYRSKAFYGCVSTLILIAGDIATNGVSLGNLMALSTAGFALYGRIVATAPLSISDQSETDVEDAKADVRKSKVAVDADRGD
Ga0170823_145634242	3300031128	Forest Soil	MTKAFYRSKAFYGCVSTIILIAGDIATNGVSLGNLMALSTAGFALYGRIVATAPLSISDQSETDVEDAKADVRKSKVAVDADRGD
Ga0170824_1212117032	3300031231	Forest Soil	MTKAFYKSKAFYGCVSTIILIAGDMASNGVSLGNLMALSTAGFALYGRIVATAPLSISDQSETDVEDAKADVRKSKVAVDADHGN
Ga0302307_100751093	3300031233	Palsa	MDTKKAFYKSKAFYGCVSTIVLIVGDIVANGVNLGNMTALITTGFALYGRIVATTPLGLSDQSENDVEDAKADVRKSTVAVDADHGN
Ga0310686_1008452833	3300031708	Soil	MNTKKGFYKSKAFYGCVSTMVLLVGDMAANGVTLGNMTALMAAGLALYGRIVATAPLAISDQTASENDVEEAKADVRKSQVAVDADRGN
Ga0310686_1012521743	3300031708	Soil	VTTKVFYKSKGFYGCVSTIVLIVGDMAANGVSIGNMTALMTAGFALYGRMVATAPLAVSDQSEADVEEAKADVRKSKVAVDADHGN
Ga0310686_10325170711	3300031708	Soil	MKKAFYKSKAFYGCVSTIVLIVGDMAANGVTLGNLTAMMTAGFALYGRIVATAPLAISDQSEADVEEAKADVRKSKIAVDADRGQ
Ga0310686_1082071525	3300031708	Soil	VTKKAFYRSKAFYGCVSTIVLIVGDIAANGVTIGNLTALMTAGFALYGRVVATAPLALSDQSETDVEEAKADVRKSKIPVDADRGQ
Ga0307474_103191892	3300031718	Hardwood Forest Soil	MNTEKKAFYRSKTFYGCVSTIVLIIGDMAANGATLANMMALMTAGFALYGRIVATAPLALSDQSETDVEDAKADVRKSKIAVDADHGN
Ga0307474_104666303	3300031718	Hardwood Forest Soil	VTGKVFYKSKGFYGCVSTIVLIVGDMATNGVTVGNMMALMTAGLALYGRIVATAPLAVSDQSENDVEDAKADVRKSKVSVDADHGN
Ga0307474_113822771	3300031718	Hardwood Forest Soil	MKKAFYKSKAFYGCVSTIVLIVGDMAANGANLGNMTALMTAGFALYGRIVATAPLAISDQSEADVEEAKADVRKSKVAVDADHGN
Ga0307474_113986982	3300031718	Hardwood Forest Soil	VSTIVLIVGDMAANGVSIGNMTALMTAGFALYGRIVATAPLAVSDQSENDVEGAKADVRKSKVAVDADRGN
Ga0307475_104893011	3300031754	Hardwood Forest Soil	VSTIVLIVGDMAANGVTLGNMTALMTAGFALYGRVVATAPLALSDQSEADVEEAKADVRKSKVAVDADRGN
Ga0307475_113658931	3300031754	Hardwood Forest Soil	LSQGMAEPRIRVTQEVSQVTGKVFYKSKGFYGCVSTIVLIVGDMAANGVTVGNMMALMTAGLALYGRIVATAPLAVSDQSENDVEDAKADVRKSKVSVDADHGN
Ga0307478_100481304	3300031823	Hardwood Forest Soil	VTKAFYKSKAFYGCVSTIVLIIGDMASNGATLANMMALMTAAFALYGRIVATAPLALSDQSETDVEDAKADVRKSKVAVDADHGN
Ga0307478_100791506	3300031823	Hardwood Forest Soil	MRKAFYKSKAFYGCVSTIVLIVGDMAANGANLANMTALMTAGFALYGRVVATAPLAISDQSEADVEEAKADVRKSKVAVDADHGN
Ga0307478_107811751	3300031823	Hardwood Forest Soil	VSPFFKPEQEAAWIVKKAFYRSKGFYGCVSTIVLIVGDMAANGVTLGNTTALMTAGFALYGRVVATAPLAISDQSEVDVEEAKADVRKSKVA
Ga0307478_108346941	3300031823	Hardwood Forest Soil	MRKAFYKSKAFYGCVSTIVLIVGDMAANGANLGNMTALMTAGFALYGRIVATAPLAISDQSEADVEEAKADVRKSKVAVDADHGN
Ga0307478_111464311	3300031823	Hardwood Forest Soil	VTGKVFYKSKGFYGCVSTIVLIVGDMAANGVTVGNMMALMTTGLALYGRIVATAPLAVSDQSEND
Ga0307478_116120592	3300031823	Hardwood Forest Soil	VTGKVFYRSKGFYGCVSTIVLIVGDMAANGVSIGNMTALMTAGFALYGRVVATAPLAISDQSEADVEEAKADVRKSKVVVDADHGA
Ga0307478_118147041	3300031823	Hardwood Forest Soil	VRRRLSQGMAEPRIRVTQEVSQVTGKVFYKSKGFYGCVSTIVLIVGDMAANGVTVGNMMALMTAGLALYGRIVATAPLAVSDQSENDVEDAKADVRKSKVSVDADHGN
Ga0307479_102440002	3300031962	Hardwood Forest Soil	VRVTSEKEMNTKKRAFYRSKAFYGCVSTIVLIVGDMAANGVTLGNLTALMAAGFALYGRVVATAPLALSDQSEADVEEAKADVRKSKVAVDADRGN
Ga0307479_113084401	3300031962	Hardwood Forest Soil	MVKRAFYKSKGFYGCVSTIVLIVGDMAANGVTVGSMFALMTAGFALYGRIVATAPLAVSDLSENDVEDAKADVRKNNKTVDADRGN
Ga0311301_129815822	3300032160	Peatlands Soil	MQIVKKAFYKSKAFYGCLSTIVLIAGDIAANCATIGNMTALITAGFALYGRIVATAPLAISDQSEADVEQAKKDVRTSEQTVNADRGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060168

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences