Metagenome Family F060148

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060148
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	58 residues
Representative Sequence	VEFGKRFSVHNNRPAPAVQETCVRCCGTGRVRERGNRIICKPCAGTGRITVVKERAS
Number of Associated Samples	91
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.20 %
% of genes near scaffold ends (potentially truncated)	21.05 %
% of genes from short scaffolds (< 2000 bps)	80.45 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.414 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (13.534 % of family members)
Environment Ontology (ENVO)	Unclassified (30.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.383 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 16.47% Coil/Unstructured: 83.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF04909	Amidohydro_2	12.78
PF00378	ECH_1	6.02
PF00856	SET	5.26
PF03401	TctC	4.51
PF00903	Glyoxalase	3.01
PF13458	Peripla_BP_6	2.26
PF01613	Flavin_Reduct	2.26
PF04028	DUF374	2.26
PF13683	rve_3	1.50
PF07927	HicA_toxin	1.50
PF00460	Flg_bb_rod	1.50
PF15919	HicB_lk_antitox	1.50
PF04365	BrnT_toxin	1.50
PF01464	SLT	0.75
PF02120	Flg_hook	0.75
PF07883	Cupin_2	0.75
PF02810	SEC-C	0.75
PF00654	Voltage_CLC	0.75
PF13744	HTH_37	0.75
PF06429	Flg_bbr_C	0.75
PF14384	BrnA_antitoxin	0.75
PF16277	DUF4926	0.75
PF13586	DDE_Tnp_1_2	0.75
PF00899	ThiF	0.75
PF01042	Ribonuc_L-PSP	0.75
PF05683	Fumerase_C	0.75
PF01052	FliMN_C	0.75
PF08028	Acyl-CoA_dh_2	0.75
PF07100	ASRT	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.51
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	2.26
COG4787	Flagellar basal body rod protein FlgF	Cell motility [N]	2.26
COG4786	Flagellar basal body rod protein FlgG	Cell motility [N]	2.26
COG2121	Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamily	Function unknown [S]	2.26
COG1749	Flagellar hook protein FlgE	Cell motility [N]	2.26
COG1558	Flagellar basal body rod protein FlgC	Cell motility [N]	2.26
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	2.26
COG1815	Flagellar basal body rod protein FlgB	Cell motility [N]	1.50
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	1.50
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	1.50
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	0.75
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.75
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.75
COG3144	Flagellar hook-length control protein FliK	Cell motility [N]	0.75
COG4288	Uncharacterized conserved protein	Function unknown [S]	0.75
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.41 %
Unclassified	root	N/A	34.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.41 %
Unclassified	root	N/A	34.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.41 %
Unclassified	root	N/A	34.59 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.11 %
Unclassified	root	N/A	34.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.02 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.50 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.11 %
Unclassified	root	N/A	34.59 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.02 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.02 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.01 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.50 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.75 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	6.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.02 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	4.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	1.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.50 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.50 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.75 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	6.77 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	4.51 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.01 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	1.50 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.75 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.75 %
Candidatus Ryanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria	0.75 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	4.51 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	4.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1.50 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.50 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
unclassified Rhodopseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas	0.75 %
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.75 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4.51 %
Pseudonocardia kujensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	4.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1.50 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1.50 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
Rhodopseudomonas sp. B29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. B29	0.75 %
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.75 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4.51 %
Pseudonocardia kujensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	4.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Singulisphaera acidiphila DSM 18658	strain	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila → Singulisphaera acidiphila DSM 18658	1.50 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1.50 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
Rhodopseudomonas sp. B29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. B29	0.75 %
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.75 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10185972	Not Available	727	Open in IMG/M
3300002245\|JGIcombinedJ26739_101443314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	582	Open in IMG/M
3300004080\|Ga0062385_10254185	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300004080\|Ga0062385_10322138	Not Available	895	Open in IMG/M
3300004080\|Ga0062385_10388649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	830	Open in IMG/M
3300004080\|Ga0062385_10445739	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300004080\|Ga0062385_11249209	Not Available	510	Open in IMG/M
3300004082\|Ga0062384_100887063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	630	Open in IMG/M
3300004092\|Ga0062389_101487490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	861	Open in IMG/M
3300004092\|Ga0062389_102922838	Not Available	639	Open in IMG/M
3300005336\|Ga0070680_100221206	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300005451\|Ga0066681_10264362	Not Available	1047	Open in IMG/M
3300005529\|Ga0070741_10106741	All Organisms → cellular organisms → Bacteria	2948	Open in IMG/M
3300005534\|Ga0070735_10239467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1102	Open in IMG/M
3300005538\|Ga0070731_10128166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1682	Open in IMG/M
3300005541\|Ga0070733_10422135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	888	Open in IMG/M
3300005574\|Ga0066694_10268089	Not Available	810	Open in IMG/M
3300005591\|Ga0070761_11036488	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005712\|Ga0070764_10649363	Not Available	647	Open in IMG/M
3300006032\|Ga0066696_10273328	Not Available	1095	Open in IMG/M
3300006059\|Ga0075017_100649933	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006102\|Ga0075015_100800632	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006176\|Ga0070765_101111980	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006176\|Ga0070765_102065851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	532	Open in IMG/M
3300007982\|Ga0102924_1000055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	125359	Open in IMG/M
3300007982\|Ga0102924_1022566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4496	Open in IMG/M
3300009521\|Ga0116222_1383420	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009523\|Ga0116221_1073487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1541	Open in IMG/M
3300009547\|Ga0116136_1042053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	1325	Open in IMG/M
3300009632\|Ga0116102_1086975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	915	Open in IMG/M
3300009700\|Ga0116217_10374727	Not Available	906	Open in IMG/M
3300009759\|Ga0116101_1187725	Not Available	522	Open in IMG/M
3300009839\|Ga0116223_10843752	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010379\|Ga0136449_102794401	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila → Singulisphaera acidiphila DSM 18658	689	Open in IMG/M
3300010396\|Ga0134126_11162208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	859	Open in IMG/M
3300011120\|Ga0150983_10146999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	543	Open in IMG/M
3300012088\|Ga0153944_1089567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300014151\|Ga0181539_1059079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1757	Open in IMG/M
3300014164\|Ga0181532_10282675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	944	Open in IMG/M
3300014164\|Ga0181532_10439089	Not Available	721	Open in IMG/M
3300014165\|Ga0181523_10002828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16354	Open in IMG/M
3300014168\|Ga0181534_10307416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300014168\|Ga0181534_10857456	Not Available	540	Open in IMG/M
3300014169\|Ga0181531_10043670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2608	Open in IMG/M
3300014169\|Ga0181531_10061043	All Organisms → cellular organisms → Bacteria → Proteobacteria	2213	Open in IMG/M
3300014169\|Ga0181531_10231638	Not Available	1125	Open in IMG/M
3300014169\|Ga0181531_10942350	Not Available	541	Open in IMG/M
3300014199\|Ga0181535_10072273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2288	Open in IMG/M
3300014199\|Ga0181535_10389979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300014200\|Ga0181526_10547743	Not Available	732	Open in IMG/M
3300014201\|Ga0181537_11079748	Not Available	543	Open in IMG/M
3300014489\|Ga0182018_10001294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28870	Open in IMG/M
3300014489\|Ga0182018_10339553	Not Available	811	Open in IMG/M
3300014492\|Ga0182013_10016372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	7051	Open in IMG/M
3300014499\|Ga0182012_10018508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	6317	Open in IMG/M
3300014501\|Ga0182024_10000692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	87780	Open in IMG/M
3300014501\|Ga0182024_10068163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	5415	Open in IMG/M
3300014501\|Ga0182024_10276428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2234	Open in IMG/M
3300014501\|Ga0182024_10352229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1924	Open in IMG/M
3300014501\|Ga0182024_12521101	Not Available	554	Open in IMG/M
3300014501\|Ga0182024_12534385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300014654\|Ga0181525_10187267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1131	Open in IMG/M
3300014657\|Ga0181522_10097968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1691	Open in IMG/M
3300014657\|Ga0181522_10651539	Not Available	641	Open in IMG/M
3300015206\|Ga0167644_1039903	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300017925\|Ga0187856_1001175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21439	Open in IMG/M
3300017946\|Ga0187879_10125057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1464	Open in IMG/M
3300017988\|Ga0181520_10287612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1237	Open in IMG/M
3300018001\|Ga0187815_10407039	Not Available	579	Open in IMG/M
3300018033\|Ga0187867_10654777	Not Available	573	Open in IMG/M
3300018035\|Ga0187875_10522639	Not Available	629	Open in IMG/M
3300018038\|Ga0187855_10801381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	549	Open in IMG/M
3300019786\|Ga0182025_1242264	Not Available	1566	Open in IMG/M
3300020582\|Ga0210395_10043961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3269	Open in IMG/M
3300021402\|Ga0210385_10320058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1153	Open in IMG/M
3300021420\|Ga0210394_10008125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10888	Open in IMG/M
3300022557\|Ga0212123_10000238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	188020	Open in IMG/M
3300022557\|Ga0212123_10002347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46112	Open in IMG/M
3300025633\|Ga0208480_1001720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7867	Open in IMG/M
3300027652\|Ga0209007_1051133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1050	Open in IMG/M
3300027737\|Ga0209038_10227088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	562	Open in IMG/M
3300027745\|Ga0209908_10015909	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300027842\|Ga0209580_10671230	Not Available	512	Open in IMG/M
3300027854\|Ga0209517_10126547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1672	Open in IMG/M
3300027854\|Ga0209517_10231543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1118	Open in IMG/M
3300027889\|Ga0209380_10740219	Not Available	561	Open in IMG/M
3300027895\|Ga0209624_10108710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1815	Open in IMG/M
3300027895\|Ga0209624_10371280	Not Available	954	Open in IMG/M
3300027905\|Ga0209415_10824208	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300027915\|Ga0209069_10947587	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila → Singulisphaera acidiphila DSM 18658	524	Open in IMG/M
3300027986\|Ga0209168_10370132	Not Available	699	Open in IMG/M
3300028906\|Ga0308309_10602971	Not Available	953	Open in IMG/M
3300028906\|Ga0308309_10716924	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300028906\|Ga0308309_11666132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	542	Open in IMG/M
3300029943\|Ga0311340_10853811	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300029943\|Ga0311340_11534243	Not Available	520	Open in IMG/M
3300029944\|Ga0311352_11180234	Not Available	582	Open in IMG/M
3300030580\|Ga0311355_11543900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	572	Open in IMG/M
3300030617\|Ga0311356_12038846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	506	Open in IMG/M
3300030706\|Ga0310039_10083298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1358	Open in IMG/M
3300031231\|Ga0170824_120329542	Not Available	883	Open in IMG/M
3300031234\|Ga0302325_12432947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	628	Open in IMG/M
3300031524\|Ga0302320_10552344	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300031525\|Ga0302326_10651146	Not Available	1553	Open in IMG/M
3300031525\|Ga0302326_13716086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	502	Open in IMG/M
3300031708\|Ga0310686_104773112	Not Available	864	Open in IMG/M
3300031708\|Ga0310686_107525195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	926	Open in IMG/M
3300031708\|Ga0310686_109326628	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300031708\|Ga0310686_110247323	Not Available	728	Open in IMG/M
3300031708\|Ga0310686_113278546	Not Available	1246	Open in IMG/M
3300031708\|Ga0310686_115567316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. B29	1434	Open in IMG/M
3300031708\|Ga0310686_115853461	Not Available	595	Open in IMG/M
3300031708\|Ga0310686_119711431	Not Available	576	Open in IMG/M
3300031715\|Ga0307476_10361342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1070	Open in IMG/M
3300031718\|Ga0307474_11267075	Not Available	582	Open in IMG/M
3300031823\|Ga0307478_10773298	Not Available	804	Open in IMG/M
3300032160\|Ga0311301_10012256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26737	Open in IMG/M
3300032160\|Ga0311301_10138992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4461	Open in IMG/M
3300032770\|Ga0335085_10331398	Not Available	1791	Open in IMG/M
3300032805\|Ga0335078_10026653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8573	Open in IMG/M
3300032805\|Ga0335078_10066143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5300	Open in IMG/M
3300032805\|Ga0335078_10563958	Not Available	1446	Open in IMG/M
3300032805\|Ga0335078_11230937	Not Available	861	Open in IMG/M
3300032805\|Ga0335078_11263947	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300032805\|Ga0335078_11692261	Not Available	694	Open in IMG/M
3300032805\|Ga0335078_12505165	Not Available	532	Open in IMG/M
3300032892\|Ga0335081_10229120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2534	Open in IMG/M
3300032892\|Ga0335081_10315082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2062	Open in IMG/M
3300032895\|Ga0335074_10738200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300033402\|Ga0326728_10007238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28839	Open in IMG/M
3300033983\|Ga0371488_0270485	Not Available	824	Open in IMG/M
3300034124\|Ga0370483_0109526	Not Available	913	Open in IMG/M
3300034163\|Ga0370515_0095361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1285	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.25%
Host-Associated	Host-Associated	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.92%
Aquatic	Environmental → Aquatic	32.33%
Fungi	Host-Associated → Fungi	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.65%
Freshwater	Environmental → Aquatic → Freshwater	27.07%
Peat	Environmental → Terrestrial → Peat	8.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.01%
Sediment	Environmental → Aquatic → Sediment	2.26%
Mycelium	Host-Associated → Fungi → Mycelium	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.80%
Loam	Environmental → Terrestrial → Soil → Loam	10.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.27%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.26%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.05%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.01%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	13.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.02%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.02%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.02%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.02%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	5.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.51%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.76%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.26%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.50%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.50%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.50%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.75%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012088	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ028 MetaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101859721	3300000567	Peatlands Soil	MDFGKRFSRHNNRPAPVILQTCERCSGTGRVRERGHPITCKVCGGTGKVRAKMDRAS*
JGIcombinedJ26739_1014433141	3300002245	Forest Soil	MDFGKRFSVHNNRPPPIVQQTCVRCCGTGRVRERGERIVCKACAGTGRIDIKTDRAS*
Ga0062385_102541852	3300004080	Bog Forest Soil	MHNNRPAPVVQETCVRCYGTGRVRERGNRIICKTCGGTGRVNVEKDRAS*
Ga0062385_103221382	3300004080	Bog Forest Soil	MHNNRTAPVIQETCVRCCGTGRIRERGNRIICKACAGTGRLTVVKDRAS*
Ga0062385_103886492	3300004080	Bog Forest Soil	MTFGKRFTQHNNRVPTVIQETCVRCYGTGRIRERGDRIICKACAGAG
Ga0062385_104457392	3300004080	Bog Forest Soil	MDFGKRFSIHNGRPAPVIQQTCERCSGTGHVRERGNRIVCKACAGSGKVAVKMDRAS*
Ga0062385_112492091	3300004080	Bog Forest Soil	VEFGKRFSTHNNRPAPVVQETCVRCYGTGRIRERGERLICKACAGTGRVAAIKDRAS*
Ga0062384_1008870632	3300004082	Bog Forest Soil	VDFGKRRFSMHNDRVAPPAQQTCERCFGVGRIRERGNRILCKACAGTGRITVKTET
Ga0062389_1014874902	3300004092	Bog Forest Soil	MTFGKRFSQHNDRVPTVIQETCVRCCGTGRIRERGDRIICKACTGAGRVAVKAERRA*
Ga0062389_1029228382	3300004092	Bog Forest Soil	MTFGKRFTQHNNRVPTVIQETCVRCYGTGRIRERGDRIICKACAGAGRVAVKAERSA*
Ga0070680_1002212061	3300005336	Corn Rhizosphere	MAFGKRFSVHNDRPPTVIQRTCVRCYGTGHIRERGTRLVCKVCTGTGKVTANDAA*
Ga0066681_102643623	3300005451	Soil	MTFGKRFSIHNNRPARVTQQACPRCCGTGRIRERGHSVTCKACAGTGRTKVTADRRA*
Ga0070741_101067415	3300005529	Surface Soil	MAFGKRFSMHNNRPQPVIERTCVRCYGTGHVRERGNRITCKPCAGTGRTPATDERLGPMSAA*
Ga0070735_102394671	3300005534	Surface Soil	MDFGKRFSVHNRRPAPLVQQTCVRCCGTGRVRERGNRIICKACNGTGRTTALIGDRAS*
Ga0070731_101281663	3300005538	Surface Soil	MKFGKRFSIHNKPVAPQQICKRCQGTCRVRERGNSIICRVCVGTGKVEAAAKRAS*
Ga0070733_104221352	3300005541	Surface Soil	MDFGKRFSVHNDRAPPVVQQTCVRCCGTGRVRERGERIVCKACAGTGRINIKTDRAS*
Ga0066694_102680893	3300005574	Soil	IFAMTFGKRFSIHNNRPARVTQQACLRCCGTGRIRERGHPVACKACAGSGRTKVTADRRV
Ga0070761_110364882	3300005591	Soil	VEFGKRFSAHNTRPAPVAQETCVRCCGTGRVRERGNRILCKACAGTGRVTLVKERAS*
Ga0070764_106493632	3300005712	Soil	MEFGKRFSAHNNRPALAVQETCERCCGTGRVRERGNRIICKPCAGTGRVTVVAERAS*
Ga0066696_102733282	3300006032	Soil	MTFGKRFSIHNNRPARVTQQACLRCCGTGRIRERGHPVACKACAGSGRTKVTADRRV*
Ga0075017_1006499332	3300006059	Watersheds	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNRLICKACAGTGRIMGKVERSA*
Ga0075015_1008006321	3300006102	Watersheds	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNRLICKACAGTGRIMGKEERSA*
Ga0070765_1011119802	3300006176	Soil	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNRLICKACAGTGRITGKEERSA*
Ga0070765_1020658512	3300006176	Soil	MVFGKRFSMHNDRAPHVIQETCVRCCGTGRIRERGDRIICKACAGTGRITVKADGDS*
Ga0102924_100005563	3300007982	Iron-Sulfur Acid Spring	VDFGKRFSQHNNRPAPVIQETCVRCCGTGRIRERGDRIICKACAGTGRTAVAADRASSG*
Ga0102924_10225664	3300007982	Iron-Sulfur Acid Spring	MAIQMVFGKRFSIHNNRVAPMVQQTCVRCCGTGHVRERGNRLICKICTGTGRTVVVAERA
Ga0116222_13834202	3300009521	Peatlands Soil	MDFGKRFSKHNNRPAPVILQTCERCSGTGRVRERGHPITCKVCGGTGKVRAKMDRAS*
Ga0116221_10734873	3300009523	Peatlands Soil	VEFGKRFSVHNNRPAPAVQQTCERCCGTGRVRERGNRIICKACAGTGRTTVVAARSA*
Ga0116136_10420533	3300009547	Peatland	MDFGKRFSVHNDRPAPVIQQTCVRCCGTGRVRERGNRIICKACAGSGRITATTDRDS*
Ga0116102_10869751	3300009632	Peatland	MDFGKRFSVHNDRPAPVIQQTCVRCCGTGRVRERGNRIICKACAGSGRITVTPDRKTA*
Ga0116217_103747272	3300009700	Peatlands Soil	KRFSKHNNRPAPVILQTCERCGGTGRVRERGHQITCKVCAGTGRVSAKMDRAS*
Ga0116101_11877251	3300009759	Peatland	MQVEFGKRRFSKHNDRVAPPAQETCVRCFGVGRIRERGNRILCKTCAGTGRITVKTEAAESTTSAA*
Ga0116223_108437521	3300009839	Peatlands Soil	MDFGKRFSKHNNRPAPVILQTCERCGGTGRVRERGHQITCKVCAGTGRVSAKMDRAS*
Ga0136449_1027944013	3300010379	Peatlands Soil	VRKTRNIRVDFGKRFSMHNDRPAAIVQETCVRCYGTGRVRERGNRLICKACAGTGRITGKEERSA*
Ga0134126_111622081	3300010396	Terrestrial Soil	FGKRFSAHNDRPLTVIQRTCVRCYGTGHIRERGTRLICKVCTGTGKVAATDAA*
Ga0150983_101469991	3300011120	Forest Soil	KTRNIRMDFGKRFSMHNDRPAAIVQETCVRCYGTGRVRERGNRLICKACAGTGRVTVKEERSA*
Ga0153944_10895672	3300012088	Attine Ant Fungus Gardens	MEFGKRRFSDHNNRIAPVIQATCVRCCGTGRIRERGNRILCKACAGTGRTNVPAARAS*
Ga0181539_10590792	3300014151	Bog	MDFGKRFSQYNHRPPPLIQQTCVRCCGTGRIRERGDRIVCKACAGTGRTTVKAERSA*
Ga0181532_102826753	3300014164	Bog	MDFGKRFSKHNNRTAPVILQTCERCSGTGRVRERGNRIICKACAGTGRTSVETERASSASPA*
Ga0181532_104390891	3300014164	Bog	VDFGKRFSKHNNRPAPVRQETCVQCFGTGRIRERGNRIVCKACAGTGRITVITDRAS*
Ga0181523_1000282819	3300014165	Bog	VDFGKRFSKHNNRPAPVRQETCVQCFGTGRIRERGDKIICKACAGTGRTSVETERASSASPA*
Ga0181534_103074161	3300014168	Bog	VEFGKRLSVHNSGPAPIAQETCVRCCGTGRIRERGDRIICKACAGTGRVNMVKERAS*
Ga0181534_108574562	3300014168	Bog	VEFGKRFSAHNNRPAPVVQQTCERCSGTGHIRERGSRIACKACAGKGRITVIKDRAS*
Ga0181531_100436703	3300014169	Bog	MAFGKRLPNSGKESAPVVQQTCVRCYGTGRVRERGDRIICKACAGTGRITVKAKRAS*
Ga0181531_100610431	3300014169	Bog	MHNDRVAPPVQETCVQCFGVGRIRERGNRILCKACAGTGRITVKLETAAAEAGSA*
Ga0181531_102316382	3300014169	Bog	LSVHNSGPAPIAQETCVRCCGTGRIRERGDRIICKACAGTGRVNMVKERAS*
Ga0181531_109423501	3300014169	Bog	NTGTQMDFGKRFSVHNDRPAPIIQATCVRCCGTGRVRERGDRLICKNCAGTGRIDVVLDRAS*
Ga0181535_100722733	3300014199	Bog	VEFGKRFSFYDNRPAPAVQETCVRCCGTGRIRERGERLICKACAETGRITVLKDRAS*
Ga0181535_103899792	3300014199	Bog	MTFGKRFSIHNDRVAPVVQQTCVRCYGTGRVRERGNRIICKACAGAGRVDAVTEQRAS*
Ga0181526_105477432	3300014200	Bog	MEFGKRFSQYNSRPPPVIQQTCVRCCGTGRIRERGDRIICKACAGSGRTTVKAERSA*
Ga0181537_110797481	3300014201	Bog	MHNDRVAPPVQETCVQCFGVGRIRERGNRILCKACAGTGRITVKTETAAAAASGAAGTA*
Ga0182018_1000129420	3300014489	Palsa	VQNKGFKVEFGKRFSVHNNRPAPVVQETCVRCCGTGRIRERGNRILCKACAGTGRITVITNRAS*
Ga0182018_103395532	3300014489	Palsa	VDFGKRFSVHNNRPAPVVQETCVRCCGTGRIRERGNRIICKTCAGSGRINVVKDRAS*
Ga0182013_100163729	3300014492	Bog	MEFGKRFSRHNGRRPPVIQQTCARCSGTGHIRERGRRIVCKACAGTGRTTVKAERRA*
Ga0182012_100185081	3300014499	Bog	MEFGKRFSRHNGRRPPVIQQTCPRCSGTGHIRERGRRIVCKACAGTGRTTVKAERRA*
Ga0182024_1000069211	3300014501	Permafrost	MVFGKRFSVQNDRAPAVVQQTCVRCYGTGRIRERGNRLICKACAGTGRINVTTEQHPS*
Ga0182024_100681633	3300014501	Permafrost	MDFGKRFSMHNNRPAPVVKETCVRCCGTGRVRVRGDRIICKPCAGTGRITVKAEQAS*
Ga0182024_102764284	3300014501	Permafrost	MDFGKRFSIHNKRPAAVVQETCVRCRGAGRIRERGERIICKACKGTGRATAKAQRSA*
Ga0182024_103522292	3300014501	Permafrost	MHNDRVAPVIQETCVRCCGTGRVRERGNRIICKTCAGSGRINTVTKRAS*
Ga0182024_125211011	3300014501	Permafrost	MTFGKRFSINNDRVAPVIRQTCERCNGTARILERGNRIICKACAGTGKVVGVAKRAS*
Ga0182024_125343851	3300014501	Permafrost	MDFGKRFSIHNNRTAPVIQHTCVRCCGTGRIRERGNRIICIACAGAGRTTVITERAS*
Ga0181525_101872671	3300014654	Bog	VEFGKRRFSKHNDRVVPPVQETCVRCFGVGRIRERGNRILCKACAGTGRITVKTETAAAAASGAAGIA*
Ga0181522_100979682	3300014657	Bog	MTFGKRFSIHNDRVAPVVQQTCVRCYGTGRVRERGNRIICRVCGGAGKVDAATERRAS*
Ga0181522_106515391	3300014657	Bog	APPAQETCVQCFGVGRVRVRGDRILCKVCAGKGRVTVKAEAAAPTENAAASASSA*
Ga0167644_10399033	3300015206	Glacier Forefield Soil	MTFGKRFTQHNNRVPTVIQETCVRCCGTGRIRERGDRILCKACAGAGRVAVKAERSA*
Ga0187856_100117524	3300017925	Peatland	MDFGKRFSVHNDRPAPVIQQTCVRCCGTGRVRERGNRIICKACAGSGRITATTDRDS
Ga0187879_101250573	3300017946	Peatland	MDFGKRFSVHNDRPAPVIQQTCVRCCGTGRVRERGNRIICKACAGSGRITVTPDRKTA
Ga0181520_102876123	3300017988	Bog	VEFGKRFSFYDNRPAPAVQETCVRCCGTGRIRERGERLICKACAETGRITVLKDRAS
Ga0187815_104070392	3300018001	Freshwater Sediment	VEFGKRFSQHNNRPAPVIQETCVRCCGTGRVRERGERIICKVCAGTGRTTVAAERAPRASSA
Ga0187867_106547772	3300018033	Peatland	MDFGKRFSMHNDRQPTVMQQTCVRCCGTGRVRERGNRIVCKTCAGTGRITIVTERAS
Ga0187875_105226391	3300018035	Peatland	MEFGKRFSRHNGRPAPVILQTCTRCSGTGHVRERGGRIVCKACAGSGRTTVQAERRA
Ga0187855_108013812	3300018038	Peatland	NHVEFGKRFSAHNHRPAPVVQHTCERCCGTGRIRERGNRIICKTCAGSGRINVVKDRAS
Ga0182025_12422642	3300019786	Permafrost	MHNDRVAPVVQETCVRCCGTGRVRERGNRIICKTCAGSGRVNIVTKRAS
Ga0210395_100439612	3300020582	Soil	MVFGKRFSMHNDRAPHIVQETCVRCCGTGRIRERGDRIICKACAGTGRITVKAEGDS
Ga0210385_103200582	3300021402	Soil	MDFGKRFSVHNDRAPPVVQQTCVRCCGTGRVRERGERIVCKACAGTGRINIKTDRAS
Ga0210394_100081259	3300021420	Soil	VDFGKRFSMHNNRPAPVVQETCVRCCGTGRIRERGDRIVCKACAGTGRIAVVTERASNA
Ga0212123_10000238131	3300022557	Iron-Sulfur Acid Spring	VDFGKRFSQHNNRPAPVIQETCVRCCGTGRIRERGDRIICKACAGTGRTAVAADRASSG
Ga0212123_100023476	3300022557	Iron-Sulfur Acid Spring	MDFGKRFSIHNNRPAVAVQETCVRCCGTGRVRVRGERIICKACAGTGRIAVKEERAS
Ga0208480_100172011	3300025633	Arctic Peat Soil	MTFGKRFSIHNDRTLAAVQQTCVRCCGTGRIRERGNRIICKACAGTGRIAGTPGATPDRHTRA
Ga0209007_10511331	3300027652	Forest Soil	VDFGKRRFSKHNDRVAPPAQETCVRCFGVGRIRERGNRILCKACAGTGRITVKTENATAAASSA
Ga0209038_102270881	3300027737	Bog Forest Soil	FGKRFSTHNNRPAPVVQETCVRCYGTGRIRERGERLICKACAGTGRVAAIKDRAS
Ga0209908_100159091	3300027745	Thawing Permafrost	VQNKGFKVEFGKRFSVHNNRPAPVVQETCVRCCGTGRIRERGNRILCKACAGTGRITVITNRAS
Ga0209580_106712301	3300027842	Surface Soil	MDFGKRLSVHTNRAPPVVQQTCVRCCGTGRVRERGERIVCKACAGTGRIDIKTDRAS
Ga0209517_101265473	3300027854	Peatlands Soil	MDFGKRFSRHNNRPAPVILQTCERCSGTGRVRERGHPITCKVCGGTGKVRAKMDRAS
Ga0209517_102315433	3300027854	Peatlands Soil	VEFGKRFSVHNNRPAPAVQQTCERCCGTGRVRERGNRIICKACAGTGRITVVAARSA
Ga0209380_107402191	3300027889	Soil	MVFGKRFSMHNDRAPHVIQETCVRCCGTGRIRERGDRIICKACAGTGRITVKADGDS
Ga0209624_101087102	3300027895	Forest Soil	VEFGKRFSVHNNRPAAAVQETCVRCCGTGRIRERGNRIICKPCAGTGRINVVKDRAS
Ga0209624_103712802	3300027895	Forest Soil	MVFGKRFSMHNDRAPHIVQETCVRCCGTGRIRERGDRIICKACAGTGRITAKADGDS
Ga0209415_108242081	3300027905	Peatlands Soil	MDFGKRFSRHNNRPAPVILQTCERCSGSGRVRERGHQITCKVCAGTGRVSAKMDRAS
Ga0209069_109475871	3300027915	Watersheds	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNLLICKACAGTGRIIGKEERSA
Ga0209168_103701321	3300027986	Surface Soil	TLMDFGKRFSVHNRRPAPLVQQTCVRCCGTGRVRERGNRIICKACNGTGRTTALIGDRAS
Ga0308309_106029711	3300028906	Soil	VDFGKRFSTHNNRPAPAVQETCVRCCGAGRIRERGNRIICKTCAGTGRITVIKDRAS
Ga0308309_107169242	3300028906	Soil	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNRLICKACAGTGRITGKEERSA
Ga0308309_116661322	3300028906	Soil	SVHNYRPAPVMQETCVRCCGTGRIRERGNRIICKPCAGTGRITVVKDRAS
Ga0311340_108538112	3300029943	Palsa	PVEFGKRFSMHNNRPAPVLQETCVRCCGTGRIRERGNRIICKACAGTGRLTVVKDRAS
Ga0311340_115342431	3300029943	Palsa	PSQIPRSKGLPVDFGKRRFSMHNDRVAPPAQETCVRCFGVGRIRERGNRILCKACAGTGRITVKPETAAAAASSA
Ga0311352_111802342	3300029944	Palsa	KSRRTKDFQVDFGKRRFSMHNDRVASPAQETCVRCFGVGRIRERGNRILCKTCAGTGRITVKTETAAAAASSA
Ga0311355_115439002	3300030580	Palsa	VEFGKRFSVHNNRPAPAVQETCVRCCGTGRVRERGNRIICKPCAGTGRITVVKERAS
Ga0311356_120388461	3300030617	Palsa	HNNRPAPVVQETCVRCCGTGRIRERGNRIICKACAGTGRLTVVKDRAS
Ga0310039_100832981	3300030706	Peatlands Soil	VEFGKRFSVHNNRPAPAVQQTCERCCGTGRVRERGNRIICKACAGTGR
Ga0170824_1203295422	3300031231	Forest Soil	MRMAFGRRFSMHNDRAPHVVQETCVRCCGTGRIRERGDRIVCKGCAGTGRITVKADGDS
Ga0302325_124329472	3300031234	Palsa	VEFGKRLSAHNDRAAPVVQQTCVRCCGTGRIRERGDRIICKTCGGTGRLNVITERAS
Ga0302320_105523444	3300031524	Bog	MEFGKRFSQHNGRPAPVIQETCVRCCGTGKIRERGDRIICKACAGAGRVVKTERSA
Ga0302326_106511462	3300031525	Palsa	VEFGKRFSVHNNRPAPAVQETCVRCCGTGRVRERGNRIICKPCAGTGRITVV
Ga0302326_137160861	3300031525	Palsa	FSVHNNRPAPAVQETCVRCCGTGRVRERGNRIICKPCAGTGRIAVVKERAS
Ga0310686_1047731122	3300031708	Soil	MHNDRVAPPVQETCVRCFGVGRIRERGNRILCKICAGTGRITVKTEDTAAAASSA
Ga0310686_1075251953	3300031708	Soil	MTFGKRFSIHNDRTPAVVQQTCVRCCGTGRIRERGNRIICKACAGTGRIAGTPGATP
Ga0310686_1093266281	3300031708	Soil	MVFGRRFSMHNDRAPHIVQETCVRCCGTGRIRERGDRIICKACAGTGRITVKADGDS
Ga0310686_1102473233	3300031708	Soil	VEFGKRFSQHNNRPAPVLQQTCVRCCGTGRIRERGERIICKACDGTGRTTVVAAAASSA
Ga0310686_1132785462	3300031708	Soil	VEFGKRFSQHNNRPALAVQETCVRCCGTGRIRERGDRIICKACAGTGRITVAAARAPSASSA
Ga0310686_1155673164	3300031708	Soil	MDFGKRFSVHNDRAPPVAQQTCVRCCGTGRVRERGERIVCKACAGTGRINIKTERAS
Ga0310686_1158534611	3300031708	Soil	MTFGKRFSIHNDRVAPVVQKTCVRCCGTGRVLERGNRIICRVCAGVGKVGAAMEQRA
Ga0310686_1197114311	3300031708	Soil	MEFGKRFSMHNDRTPKAVQQTCVRCCGTGRVRESGNRLVCQTCAGSGRTAVAEKRTA
Ga0307476_103613421	3300031715	Hardwood Forest Soil	MDFGKRFSVHNHRTPPVVQQTCVRCSGTGRVRERGNRIICKACGGSGKMNVKTGRAS
Ga0307474_112670751	3300031718	Hardwood Forest Soil	TKDIQMDFGKRRFSDHNNRPAPVIQQTCVRCCGTGHVRERGNRIVCKVCTGTGRTTAERDRAAQRA
Ga0307478_107732981	3300031823	Hardwood Forest Soil	FTNRAMQRIFDMDFGKRFSVHNNRAPPVIQQTCVRCCGTGHVRERGNRIVCKVCTGTGRTTAERDRAAQRA
Ga0311301_1001225621	3300032160	Peatlands Soil	MDFGKRFSKHNNRPAPVILQTCERCGGTGRVRERGHQITCKVCAGTGRVSAKMDRAS
Ga0311301_101389926	3300032160	Peatlands Soil	VDFGKRFSMHNNRPAPVVQETCVRCCGTGRIRERGDRIVCKACAGTGRIAVVTERASSA
Ga0335085_103313983	3300032770	Soil	MVFGKRFSMHNNRVAPIVQQTCVRCCGTGRIRERGNRIICKTCAGAGRINAAETEQAS
Ga0335078_1002665310	3300032805	Soil	MEFGKRRFSMHNDRQAPAAQETCVRCCGTGRVRERGNRISCKACKGTGRVNVAAERAH
Ga0335078_100661432	3300032805	Soil	MVFGKRFSIHNNRVAPVVQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0335078_105639581	3300032805	Soil	MDFGKRRFSMHNGRVAPPVKQTCVRCSGTGHVRERGNLIVCKACAGSGRTMVVTHRAS
Ga0335078_112309371	3300032805	Soil	HNNRPAPVLQETCVRCCGTGRVRERGERIVCKVCAGTGRTTVKSDRSA
Ga0335078_112639472	3300032805	Soil	MAIQTVFGKRFSIHNNRVATVIQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0335078_116922611	3300032805	Soil	MAIQMVFGKRFSIHNNRVATVIQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0335078_125051652	3300032805	Soil	AIQMVFGKRFSIHNNRVATVIQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0335081_102291201	3300032892	Soil	MDFGKRFSVHNNRAPPVVHQTCVRCSGTGHVRERGNRIICKACAGSGKINVKTDRAS
Ga0335081_103150823	3300032892	Soil	MEFGKRLSIDDRRAAPVLQQTCVRCCGTGRIRERGNRILCRACTGTGRTTVRTDDDC
Ga0335074_107382002	3300032895	Soil	MAIQMAFGKRFSIHNNRVATVIQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0326728_100072388	3300033402	Peat Soil	MDFGKRRFSGHNDRPAPILQETCVRCCGTGRIRERGNRIICKVCTGTGRITVVRDRAS
Ga0371488_0270485_585_761	3300033983	Peat Soil	MDFGKRRFSMHNDRTAPAVQETCVKCYGTGRIRERGNRIICKTCAGSGRVTAVKERAS
Ga0370483_0109526_104_280	3300034124	Untreated Peat Soil	MIFGKRFSMHNNRPPVVMKETCVRCCGTGHIRERGNRLICKICSGTGRVTTVEPKQTA
Ga0370515_0095361_93_287	3300034163	Untreated Peat Soil	VDFGKRRFSKHNDRVAPPAQETCVRCFGVGRIRERGNRILCKACAGTGRITVKTENAAAAASGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060148

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences