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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F060129 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 133 |
| Average Sequence Length | 78 residues |
| Representative Sequence | MREFVFEVSITAIVRVRAETEADARQALTSSVFGSPSANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSS |
| Number of Associated Samples | 103 |
| Number of Associated Scaffolds | 133 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 66.41 % |
| % of genes near scaffold ends (potentially truncated) | 33.08 % |
| % of genes from short scaffolds (< 2000 bps) | 93.98 % |
| Associated GOLD sequencing projects | 94 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.30 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (84.962 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.060 % of family members) |
| Environment Ontology (ENVO) | Unclassified (44.361 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (54.887 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 18.69% β-sheet: 0.00% Coil/Unstructured: 81.31% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.30 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 133 Family Scaffolds |
|---|---|---|
| PF01068 | DNA_ligase_A_M | 2.26 |
| PF13408 | Zn_ribbon_recom | 0.75 |
| PF13551 | HTH_29 | 0.75 |
| PF13545 | HTH_Crp_2 | 0.75 |
| PF00027 | cNMP_binding | 0.75 |
| PF01695 | IstB_IS21 | 0.75 |
| PF07007 | LprI | 0.75 |
| PF07045 | DUF1330 | 0.75 |
| PF13384 | HTH_23 | 0.75 |
| PF13493 | DUF4118 | 0.75 |
| PF13683 | rve_3 | 0.75 |
| COG ID | Name | Functional Category | % Frequency in 133 Family Scaffolds |
|---|---|---|---|
| COG1423 | ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family | Replication, recombination and repair [L] | 2.26 |
| COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 2.26 |
| COG1484 | DNA replication protein DnaC | Replication, recombination and repair [L] | 0.75 |
| COG3755 | Uncharacterized conserved protein YecT, DUF1311 family | Function unknown [S] | 0.75 |
| COG5470 | Uncharacterized conserved protein, DUF1330 family | Function unknown [S] | 0.75 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 84.96 % |
| All Organisms | root | All Organisms | 15.04 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 24.06% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 8.27% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 6.02% |
| Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 5.26% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 4.51% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.76% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 3.76% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 3.01% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 3.01% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.01% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.01% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 3.01% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 3.01% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.01% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.26% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 2.26% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.26% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.50% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.50% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.50% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.50% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.50% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.50% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.50% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.50% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.75% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.75% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.75% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.75% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.75% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.75% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004153 | Grasslands soil microbial communities from Hopland, California, USA (version 2) | Environmental | Open in IMG/M |
| 3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
| 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300006038 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Host-Associated | Open in IMG/M |
| 3300006048 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Host-Associated | Open in IMG/M |
| 3300006178 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Host-Associated | Open in IMG/M |
| 3300006580 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006581 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009610 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1 | Environmental | Open in IMG/M |
| 3300012906 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1 | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300017965 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T | Environmental | Open in IMG/M |
| 3300018027 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex | Environmental | Open in IMG/M |
| 3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
| 3300018051 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1 | Environmental | Open in IMG/M |
| 3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
| 3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
| 3300018074 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2 | Environmental | Open in IMG/M |
| 3300018082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2 | Environmental | Open in IMG/M |
| 3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
| 3300019263 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
| 3300020002 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1 | Environmental | Open in IMG/M |
| 3300020016 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1 | Environmental | Open in IMG/M |
| 3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
| 3300021082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo | Environmental | Open in IMG/M |
| 3300021344 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2 | Environmental | Open in IMG/M |
| 3300021363 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2 | Environmental | Open in IMG/M |
| 3300022694 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex | Environmental | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027866 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028708 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152 | Environmental | Open in IMG/M |
| 3300028710 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380 | Environmental | Open in IMG/M |
| 3300028714 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196 | Environmental | Open in IMG/M |
| 3300028771 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369 | Environmental | Open in IMG/M |
| 3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
| 3300028880 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181 | Environmental | Open in IMG/M |
| 3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031099 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031455 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S | Environmental | Open in IMG/M |
| 3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
| 3300034151 | Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17 | Environmental | Open in IMG/M |
| 3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI10216J12902_1024616963 | 3300000956 | Soil | MDEFVFEVFITAVVRVRAETETDARQVVTSSAIAAPSAAEISLANQANFIEGKNASITDVDFSIDSNSIKLHE* |
| JGI10216J12902_1165602142 | 3300000956 | Soil | SMREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTILEVDFSIVDNSVKLRDVDEGSSSAP* |
| Ga0063455_1009010132 | 3300004153 | Soil | VFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKQGSITDVDFSIDGNSIKLLEEA* |
| Ga0063455_1013993561 | 3300004153 | Soil | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLSNEANFIEGKEGTILEVDFSIVDNSVKLRDVDEGSSSAP* |
| Ga0062589_1013926812 | 3300004156 | Soil | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSSAS* |
| Ga0062590_1016838871 | 3300004157 | Soil | MPEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNPVKLKNVLDEGS* |
| Ga0062595_1020535441 | 3300004479 | Soil | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKQGSITDVDFSIDGNSIKLLEEAWTSL* |
| Ga0062592_1005108662 | 3300004480 | Soil | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRAS* |
| Ga0068869_1005845941 | 3300005334 | Miscanthus Rhizosphere | MDEFVFEVFITAVVRVRAETEADARQVVTSSAIAAPSAAEISLANQANFIEGKNASISNVDFSIDSNSIKLHEEALTSL*PTAAAT* |
| Ga0068869_1020802382 | 3300005334 | Miscanthus Rhizosphere | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNLDKGSSRA* |
| Ga0070691_108245851 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSSAS* |
| Ga0070674_1003843991 | 3300005356 | Miscanthus Rhizosphere | AIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS* |
| Ga0070674_1009039532 | 3300005356 | Miscanthus Rhizosphere | MGEFVFDVFITAVVRVRAETEADARQALTSSALAAPSAADIGLANQASVIQGNSAVITDVDFSIDG |
| Ga0070700_1004081273 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRAS* |
| Ga0070663_1008369632 | 3300005455 | Corn Rhizosphere | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKQGSITDVDFSIDGNSIKLLEEA* |
| Ga0070662_1000865304 | 3300005457 | Corn Rhizosphere | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKQGSITDVDFSIDGNSIKLHEEA* |
| Ga0070665_1025390171 | 3300005548 | Switchgrass Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSALGSPSANEIRLANQANFIEGKEGTITEVDFSIMDNSVKLRNVDEGSASAL* |
| Ga0070702_1000702213 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MPEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNSVKL |
| Ga0068866_107179711 | 3300005718 | Miscanthus Rhizosphere | IVRLRAETKALARQAVISSALASPSEDEIRLAYQAGFVEGEEATITGVDFSIDENFVKLRDFDERS* |
| Ga0068866_111434462 | 3300005718 | Miscanthus Rhizosphere | FITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKQGSITDVDFSIDGNSIKLLEEA* |
| Ga0068861_1023466992 | 3300005719 | Switchgrass Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS* |
| Ga0075365_100731604 | 3300006038 | Populus Endosphere | RSMPEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNSVKLKNVLDEGS* |
| Ga0075363_1007061042 | 3300006048 | Populus Endosphere | MREFVFEVSITAMVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRAS* |
| Ga0075363_1007282161 | 3300006048 | Populus Endosphere | MPEFVFELSLKAIVRVRAETEADARQALTSSVLRSPSANVIRLANEANFIAGMEGTITEVDFSIVDNSVKFKNVIDEGS* |
| Ga0075363_1008247331 | 3300006048 | Populus Endosphere | SLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNSVKLKNVLDEGS* |
| Ga0075367_101651803 | 3300006178 | Populus Endosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTILEVDFSIVDNSVKLRDVDEGSSSAP* |
| Ga0074049_119145272 | 3300006580 | Soil | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSNAP* |
| Ga0074048_132709731 | 3300006581 | Soil | GGGAPAGAWAETEADARPAVTSSALASPSTDEIRLANQANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAP* |
| Ga0068865_1017264512 | 3300006881 | Miscanthus Rhizosphere | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSI |
| Ga0105245_110160692 | 3300009098 | Miscanthus Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSALGSPSANEIRLANQANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSNAP* |
| Ga0105243_101155375 | 3300009148 | Miscanthus Rhizosphere | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDKGSSSAS* |
| Ga0105243_105131873 | 3300009148 | Miscanthus Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLANEVNFIEGKEGTILEADFSIVDN |
| Ga0111538_134371052 | 3300009156 | Populus Rhizosphere | SLKAIVRVRAETEADARQALTSSVLRSPSANVIRLANEANFIAGMEGTITEVDFSIVDNSVKFKNVIDEGS* |
| Ga0105242_104915591 | 3300009176 | Miscanthus Rhizosphere | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDQGSSSAS* |
| Ga0105237_108281581 | 3300009545 | Corn Rhizosphere | MQEFVFEVVIATIVRLRAETKALARQAVISSALASPSEDEIRLAYQAGFVEGAEATITGVDFSIDENFVKLRDFDERS* |
| Ga0105238_119791751 | 3300009551 | Corn Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVFGSPSANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSRTS* |
| Ga0105249_124007932 | 3300009553 | Switchgrass Rhizosphere | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS* |
| Ga0105340_12136572 | 3300009610 | Soil | MREFVFEVSITAIVRVRAETEADARQALTSSVFGSPSANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSS |
| Ga0134128_126188552 | 3300010373 | Terrestrial Soil | MREFVFEVSITAIVRVRAETEADARQALTSSVFGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRDVDEWSSSVP* |
| Ga0105239_134480881 | 3300010375 | Corn Rhizosphere | MDEFVFEVFITAVVRVRAETEADARQVVTSSAIAAPSAAEISLANQANFIEGKNASISNVDFSIDSNSIKLHEEALTSL* |
| Ga0134127_102577872 | 3300010399 | Terrestrial Soil | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNPVNLRNVDKGSSRAS* |
| Ga0134122_106182413 | 3300010400 | Terrestrial Soil | MPEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNPVKLKNV |
| Ga0134121_106152733 | 3300010401 | Terrestrial Soil | MPEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNSVKLKNVIDEGS* |
| Ga0105246_113342621 | 3300011119 | Miscanthus Rhizosphere | MPEFVFEVSLKAIVRVRAETKADARQALTSSVLRSPSANDIRLANEANFTAGMEGTMTEVDFSIVDNSVKLKNVLDEGS* |
| Ga0105246_115617221 | 3300011119 | Miscanthus Rhizosphere | VVIATIVRLRAETKALARQAVISSALASPSEDEIRLAYQAGFVEGAEATITGVDFSIDENFVKLRDFDERS* |
| Ga0105246_118162192 | 3300011119 | Miscanthus Rhizosphere | VSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS* |
| Ga0150985_1110508031 | 3300012212 | Avena Fatua Rhizosphere | MDEFVFEVFITAVVRVRAETETDARQVVTSSAIAAPSAAEISLANQANFIEGKNASITDVDFSIDSNSIKLYE* |
| Ga0150985_1167040702 | 3300012212 | Avena Fatua Rhizosphere | AVVRVRAETEADARQAVTSSALASPSADEIRLANQANFIAGREGTITEVDFSIVDDRVKLRDIDDSSSVP* |
| Ga0150985_1195140811 | 3300012212 | Avena Fatua Rhizosphere | MGEFVFDVSITAVVRVQAETEADARQILTSSALAAPSTADIGLVNQASFIQGNTALITDVDFSIDGTKLH |
| Ga0150984_1065933351 | 3300012469 | Avena Fatua Rhizosphere | RSMREFVFEVSIFAIVRVRAETEADARQALTSSVFGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDEGSSSAS* |
| Ga0157288_101938471 | 3300012901 | Soil | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLKNVIDEGS* |
| Ga0157295_103545331 | 3300012906 | Soil | MGEFVFDVSITAVVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRAS* |
| Ga0164298_109889712 | 3300012955 | Soil | MREFVFAVSITAIVRVRAATVADARQALTCSVLGSPSGNEIRLANEANFIKGKEGTITEVDFSIVDNSVKLRDVDEGSSSAP* |
| Ga0164304_109230411 | 3300012986 | Soil | MGEFVFDVFITAVVRVRAETEADARQALTSSVLGSPSANEIRLVNEANFIEGKEGTITEVDFSIVDNSVKLRDVDEGSSSAP* |
| Ga0164306_111678251 | 3300012988 | Soil | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTILEVDFSIVDNSVKLRNVDEGSSSAS* |
| Ga0164305_112379752 | 3300012989 | Soil | MPEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTITEVDFSIVDNSVKLKNVLDEGS* |
| Ga0164305_115018872 | 3300012989 | Soil | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTIIEVDFSIADKSVKLRDVDDSSSVS* |
| Ga0157378_116681372 | 3300013297 | Miscanthus Rhizosphere | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKNASISNVDFSIDSNSIKLHEEALTSL* |
| Ga0163162_116142742 | 3300013306 | Switchgrass Rhizosphere | MGEFVFEVSITAVVRVKAETEADARQAVTSSAIGAPSVAEISLANQASFIEGKNASITDVDFSIDNNSIKPHEEA* |
| Ga0157375_134084651 | 3300013308 | Miscanthus Rhizosphere | MREFVFEVSITAMVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTILEVDFSIVDNSVKLRDVDEGSSSAP* |
| Ga0157380_113427812 | 3300014326 | Switchgrass Rhizosphere | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTNTEVDFSIVDNSVKLRDVDEGSSSAP* |
| Ga0157380_122713742 | 3300014326 | Switchgrass Rhizosphere | MDEFVFEVFITAVVRVKAETEADARQAVTSSAIGAPSVAEISLANQASFIEGKKGSITDVDFSIDSNSIKLHE* |
| Ga0157379_111376231 | 3300014968 | Switchgrass Rhizosphere | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRAS* |
| Ga0157379_122774621 | 3300014968 | Switchgrass Rhizosphere | MPEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNSVKLKN |
| Ga0157376_118266141 | 3300014969 | Miscanthus Rhizosphere | VRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRAS* |
| Ga0137412_100470772 | 3300015242 | Vadose Zone Soil | MQEFVFEVVIAAVVRVRAETKALAQQVVISSALASPSEDEIRLANQAGFVEGKEATITGVDFSINENFVKLRDFDEGS* |
| Ga0132258_129241271 | 3300015371 | Arabidopsis Rhizosphere | MGEFVFDVFITAVVRVRAETEADARQALTSSALAAPSAADIGLANQASVIQGNSAVITDVDFSI |
| Ga0132258_130956722 | 3300015371 | Arabidopsis Rhizosphere | MREFVFEVSITAIARVRAETEADARQALTSSVLGAPSANEIRLANEANFIEGKEGTILEVDFSIVDNSVKLRDVDEGSSSAP* |
| Ga0132255_1053218171 | 3300015374 | Arabidopsis Rhizosphere | MDEFVFEVFITAVVRVRAETEADARQVVTSSAIAAPSAAEISLANQANFIEGKQGSITDVDFSIDGNSIKLLE |
| Ga0132255_1056868401 | 3300015374 | Arabidopsis Rhizosphere | MPEFVFELSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNSVKLKNVLDEGS* |
| Ga0163161_109966242 | 3300017792 | Switchgrass Rhizosphere | MREFVFKVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSNAP |
| Ga0190266_102142972 | 3300017965 | Soil | MREFVFKVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS |
| Ga0184605_100068497 | 3300018027 | Groundwater Sediment | MQEFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFVVGKEATITGVDFSIDENFVTLRDFDEGS |
| Ga0184608_100394793 | 3300018028 | Groundwater Sediment | MQEFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFVEGKEATITGVDFSIDENFVTLRDFDEGS |
| Ga0184620_102482531 | 3300018051 | Groundwater Sediment | EVFITAVVRVRAETEADARQVVASSAIAAPSAAEISLANQASFIEGKNASISEVDFSIDSNSIKLHEEA |
| Ga0184611_10475922 | 3300018067 | Groundwater Sediment | MREFVFEVSIFAIVRVRAETQADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRDVDDSSIVP |
| Ga0184611_12044211 | 3300018067 | Groundwater Sediment | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKNASITEVDFSADANSIKLHEEAST |
| Ga0184611_13562492 | 3300018067 | Groundwater Sediment | MDEFVFEVFITAVVRVRAETEADARQVVTSSAIAAPSAAEISLANQANFIEGKNASISNVDFSIDSNSIKLHEEALTSL |
| Ga0184624_103870012 | 3300018073 | Groundwater Sediment | MGEFVFEVFITAVVRVKAETEGDARQAVTSSAIGAPSAAEISLANQASFIEGKNASITDVDFSIDSNSIKLHEEA |
| Ga0184640_103434902 | 3300018074 | Groundwater Sediment | MDEFVFEVFITAVVRVRAETEADARQVVTSSAIAAPSAAEISLANQANFIEGKNASISNVDFSIDSNSIKLHEEASTP |
| Ga0184640_103748122 | 3300018074 | Groundwater Sediment | MREFVFEVSITAIVRVRAETQADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS |
| Ga0184639_102908991 | 3300018082 | Groundwater Sediment | MDEFVFEVFITAVVRVRAETEADARQVVASSAIAAPSAAEISLANQANFIEGKNASISNVDFSIDSNSIKLHEEALTSL |
| Ga0184628_101605251 | 3300018083 | Groundwater Sediment | MDEFVFEVFITAVVRVRAETEADARQVVTSSAIAAPSAAEISLANQASFIEGKNASITGVDFSIDSSSIKLHEEA |
| Ga0190270_103498082 | 3300018469 | Soil | MREFVFEVSIMAVVRVRAETEADARQAVTSSALASPSAEEIKLANQANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAP |
| Ga0190270_109676601 | 3300018469 | Soil | MTEFVFEVTITAVVRVKAETEADARRAVTSSAIGAPSAAEISLANQASFIEGKNASITDVDFSIDSNSIKLHEEA |
| Ga0190270_123319791 | 3300018469 | Soil | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKNASITEVDFSADANSIKLHEEASTP |
| Ga0190270_131795631 | 3300018469 | Soil | MREFIFKVAITAVVQVRAETEADARQAVVYSSALGSPSADEIRLANQGNFIEGKEGTITEVDFSIADNSVKLRDVDDSSIVP |
| Ga0190274_115730051 | 3300018476 | Soil | MDEFVFEVSITAVVQVQAETEADARQAVTSSAIGAPSTAEISLANQAILIQGKDASITDVDFSIDSNSIKLHAEA |
| Ga0190271_120978852 | 3300018481 | Soil | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFVEGKNASITNVDFSADANSIKLHEEASTP |
| Ga0184647_12733702 | 3300019263 | Groundwater Sediment | VTITAVVRVKAETEADARRAVTSSAIGAPSAAEISLANQASFIEGKNASITGVDFSIDSSSIKLHEEAPTP |
| Ga0193728_11051071 | 3300019890 | Soil | MREFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFVEGKEATITGVDFSIDENFVTLRDFDEGS |
| Ga0193730_11303262 | 3300020002 | Soil | MQEFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFAEGKEATITGVDFSINENFVKLRDFDEGS |
| Ga0193696_10745902 | 3300020016 | Soil | MREFVLEVSIVAVVRVRAETEADARQAVTSSALASPSTDEIRLANQANFIEGKEGTITEVDFSIVGNSVKLRHVDEGSSSAP |
| Ga0193696_11005851 | 3300020016 | Soil | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS |
| Ga0210381_101395351 | 3300021078 | Groundwater Sediment | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKNASISNVDFSIDSNSIKLHEEALTSL |
| Ga0210381_103934461 | 3300021078 | Groundwater Sediment | MQEFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFVEGKEATISGVDFSIDENFVKLRDFDEGSRRSP |
| Ga0210380_100786103 | 3300021082 | Groundwater Sediment | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSRTS |
| Ga0193719_102026591 | 3300021344 | Soil | RLEMQEFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFAEGKEATITGVDFSIDENFVKLRDFDEGS |
| Ga0193699_100820032 | 3300021363 | Soil | MQEFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFVEGKEATITGVDFSIDENFVKLRDFDEGS |
| Ga0193699_102753161 | 3300021363 | Soil | MREFVFEVAITALVRVRAETEADARQAVYSSALGSPSADEIRLANQANFREGKEGTITEVDFSIVDNSVKLRNVDEGSSSAP |
| Ga0222623_101159912 | 3300022694 | Groundwater Sediment | MREFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFVVGKEATITGVDFSIDENFVTLRDFDEGS |
| Ga0207694_114814351 | 3300025924 | Corn Rhizosphere | TAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS |
| Ga0207650_106149131 | 3300025925 | Switchgrass Rhizosphere | MPEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNPVKLKNVLDEGS |
| Ga0207706_102299722 | 3300025933 | Corn Rhizosphere | MREFVFEVSITAIVRARAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTILEVDFSIVDNSVKLRDVDEGSSSAP |
| Ga0207686_107911461 | 3300025934 | Miscanthus Rhizosphere | RLSIRGGRSMPEFVFEVSLKAIVRARAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNPVKLKNVLDEGS |
| Ga0207704_110582671 | 3300025938 | Miscanthus Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIADNPVNLRNVDKGSSRAS |
| Ga0207712_119369791 | 3300025961 | Switchgrass Rhizosphere | SQKSSLRLSSLVGGNRSMREFVFEVSITAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS |
| Ga0207678_104205172 | 3300026067 | Corn Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRAS |
| Ga0207678_116834892 | 3300026067 | Corn Rhizosphere | PEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTITEVDFSIVDNSVKLKNVIDEGS |
| Ga0207708_101273642 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | LKCPLPAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDEGSSSAS |
| Ga0207698_116855642 | 3300026142 | Corn Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDKGSSRAS |
| Ga0209813_100717301 | 3300027866 | Populus Endosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRAS |
| Ga0209813_104746111 | 3300027866 | Populus Endosphere | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKQGSITDVDFSIDGNSIKLLEEAWTSL |
| Ga0209488_108347171 | 3300027903 | Vadose Zone Soil | MQEFVFEVVIAAVVRVRAETKALAQQVVISSALASPSEDEIRLANQAGFVEGKEATITGVDFSIDENFVTLRDFDEGS |
| Ga0268266_109458241 | 3300028379 | Switchgrass Rhizosphere | MDEFVFEVFITAVVRVRAETEADARQAVTSSAIAAPSAAEISLANQANFIEGKQGSITDVDFSIDGNSIKLLEEA |
| Ga0268266_114922862 | 3300028379 | Switchgrass Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVLGAPSANEIRLANEANFIEGKEGTIIEVDFSIADKSVKLRDVDDSSGVS |
| Ga0268266_122378141 | 3300028379 | Switchgrass Rhizosphere | LSGGGRSMPEFVFEVSLKAIVRVRAETEADARQALTSSVLRSPSANDIRLANEANFIAGMEGTMTEVDFSIVDNPVKLKNVLDEGS |
| Ga0268265_113235801 | 3300028380 | Switchgrass Rhizosphere | MREFVFEVSITAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS |
| Ga0307295_101993601 | 3300028708 | Soil | MQEFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFVEGKEATITGVDFSIDENFVKLRDFDE |
| Ga0307322_100590531 | 3300028710 | Soil | MQEFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFVVGKEATITGVDFSIDENFVKLRDFDEGS |
| Ga0307309_100974631 | 3300028714 | Soil | MQEFVFEVVIAAVVRVRAETKALARQVVISSALASPSEDEIRLANQAGFVVGKEATITGVDFSIDE |
| Ga0307320_102408231 | 3300028771 | Soil | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRDVDDSSIVP |
| Ga0307302_104769932 | 3300028814 | Soil | MREFVFEVSITAIVRVRAETQADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS |
| Ga0307300_103528391 | 3300028880 | Soil | VFEVSITAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIVDNSVKLRNVDEGSSSAS |
| Ga0308204_100839992 | 3300031092 | Soil | SIMALVRVRAETEADARQAVTSSAIAAPSAAEIILANQASFIEGKNASITNVDFSIDSNSIKPHEEA |
| Ga0308181_11431611 | 3300031099 | Soil | MDEFVFEVFITAVVRVRAETEADARQVVTSSAIAAPSAAEISLANQASFIEGKNASITDVDFSIDSNSIKLHEEA |
| Ga0308187_101167572 | 3300031114 | Soil | MGEFVFEVFITAVVRVKAETEADARQAVTSSAIAAPSAAEISLANQASFIEGKNASITDVDFSIDSNSIKLHEEA |
| Ga0307505_105343811 | 3300031455 | Soil | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRTS |
| Ga0310887_102266392 | 3300031547 | Soil | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPAANEIRLANEANFIEGKEGTITEVDFSIMDNSVKLRNVDEGSASAL |
| Ga0310892_106245081 | 3300031858 | Soil | MREFVFKVSIFAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIKGKEGTITEVDFSIADNS |
| Ga0310900_103400631 | 3300031908 | Soil | MREFVFEVSIFAIVRVRAETEADARQALTSSVLGSPSANEIRLANEANFIEGKEGTITEVDFSIVDNSVKL |
| Ga0364935_0133344_306_554 | 3300034151 | Sediment | MREFVFEVSITAIVRVRAETEADARQALTSSVFGSPSANEIRLANEANFIEGKEGTITEVDFSIADNSVKLRNVDKGSSRTS |
| Ga0370545_017020_937_1173 | 3300034643 | Soil | MDEFVFEVFITAVVRVRAETEADARQVVTSSAIAAPSAAEISLANQANFIEGKNASISNVDFSIDSNSIKLHEEASAP |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |