NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F060118

Metagenome / Metatranscriptome Family F060118

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F060118
Family Type Metagenome / Metatranscriptome
Number of Sequences 133
Average Sequence Length 60 residues
Representative Sequence MRTLKVHFPDDALPTLDTFLKQTKEARVFRRAQAVRNVVKGQRLQTVSDTLSFTYSALR
Number of Associated Samples 109
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 93.23 %
% of genes near scaffold ends (potentially truncated) 81.95 %
% of genes from short scaffolds (< 2000 bps) 91.73 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.977 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(16.541 % of family members)
Environment Ontology (ENVO) Unclassified
(19.549 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.857 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.17%    β-sheet: 0.00%    Coil/Unstructured: 44.83%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF13358DDE_3 3.76
PF13546DDE_5 3.76
PF01526DDE_Tnp_Tn3 1.50
PF00924MS_channel 1.50
PF02452PemK_toxin 0.75
PF01844HNH 0.75
PF13424TPR_12 0.75
PF01610DDE_Tnp_ISL3 0.75
PF12762DDE_Tnp_IS1595 0.75
PF12760Zn_Tnp_IS1595 0.75
PF01266DAO 0.75
PF03400DDE_Tnp_IS1 0.75
PF01797Y1_Tnp 0.75
PF12759HTH_Tnp_IS1 0.75
PF16864Dimerisation2 0.75
PF01051Rep_3 0.75
PF05685Uma2 0.75
PF13673Acetyltransf_10 0.75
PF13384HTH_23 0.75
PF13005zf-IS66 0.75
PF01408GFO_IDH_MocA 0.75
PF00067p450 0.75
PF04932Wzy_C 0.75
PF00872Transposase_mut 0.75
PF05168HEPN 0.75
PF13565HTH_32 0.75
PF13586DDE_Tnp_1_2 0.75
PF13191AAA_16 0.75
PF00989PAS 0.75
PF00072Response_reg 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 1.50
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 1.50
COG4644Transposase and inactivated derivatives, TnpA familyMobilome: prophages, transposons [X] 1.50
COG1662Transposase and inactivated derivatives, IS1 familyMobilome: prophages, transposons [X] 0.75
COG1895HEPN domain protein, predicted toxin of MNT-HEPN systemDefense mechanisms [V] 0.75
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.75
COG2124Cytochrome P450Defense mechanisms [V] 0.75
COG2250HEPN domain protein, predicted toxin of MNT-HEPN systemDefense mechanisms [V] 0.75
COG2337mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin moduleDefense mechanisms [V] 0.75
COG3307O-antigen ligaseCell wall/membrane/envelope biogenesis [M] 0.75
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.75
COG3464TransposaseMobilome: prophages, transposons [X] 0.75
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.75
COG5527Protein involved in initiation of plasmid replicationMobilome: prophages, transposons [X] 0.75


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.98 %
UnclassifiedrootN/A9.02 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_100150314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6613Open in IMG/M
3300002896|JGI24802J43972_1012649All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300004081|Ga0063454_101947871All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005171|Ga0066677_10074185All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1754Open in IMG/M
3300005294|Ga0065705_10252890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61188Open in IMG/M
3300005295|Ga0065707_10329384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6952Open in IMG/M
3300005332|Ga0066388_101483863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_41184Open in IMG/M
3300005332|Ga0066388_106063281All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300005445|Ga0070708_100475130All Organisms → cellular organisms → Bacteria1179Open in IMG/M
3300005446|Ga0066686_10901479All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300005447|Ga0066689_11053822Not Available500Open in IMG/M
3300005467|Ga0070706_100359270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61357Open in IMG/M
3300005467|Ga0070706_102043782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6519Open in IMG/M
3300005518|Ga0070699_101240758All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300005555|Ga0066692_10759728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Planktothrix → Planktothrix agardhii598Open in IMG/M
3300005556|Ga0066707_10593281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6709Open in IMG/M
3300005557|Ga0066704_10710902All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005558|Ga0066698_11049254All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005560|Ga0066670_10472874All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria772Open in IMG/M
3300005586|Ga0066691_10894958All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6522Open in IMG/M
3300005598|Ga0066706_10075405All Organisms → cellular organisms → Bacteria2375Open in IMG/M
3300005764|Ga0066903_107415816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Octadecabacter → Octadecabacter arcticus566Open in IMG/M
3300005842|Ga0068858_100281318All Organisms → cellular organisms → Bacteria1584Open in IMG/M
3300005873|Ga0075287_1030632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi698Open in IMG/M
3300005981|Ga0081538_10265747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6645Open in IMG/M
3300006049|Ga0075417_10503877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6609Open in IMG/M
3300006194|Ga0075427_10009210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1469Open in IMG/M
3300006796|Ga0066665_11012872All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300006800|Ga0066660_11404774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6547Open in IMG/M
3300006844|Ga0075428_101087724All Organisms → cellular organisms → Bacteria → Proteobacteria845Open in IMG/M
3300006846|Ga0075430_101608169Not Available533Open in IMG/M
3300006847|Ga0075431_100341481All Organisms → cellular organisms → Bacteria1507Open in IMG/M
3300006853|Ga0075420_100852317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6784Open in IMG/M
3300006880|Ga0075429_101537739Not Available579Open in IMG/M
3300006904|Ga0075424_101523257All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6710Open in IMG/M
3300007076|Ga0075435_100365492All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Thalassobius → unclassified Thalassobius → Thalassobius sp.1238Open in IMG/M
3300007076|Ga0075435_100991046All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300007076|Ga0075435_101558369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6579Open in IMG/M
3300007076|Ga0075435_101897894All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300007076|Ga0075435_102063393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6501Open in IMG/M
3300007255|Ga0099791_10041076All Organisms → cellular organisms → Bacteria2054Open in IMG/M
3300007255|Ga0099791_10616426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6531Open in IMG/M
3300009012|Ga0066710_100266838All Organisms → cellular organisms → Bacteria2487Open in IMG/M
3300009012|Ga0066710_102296267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6785Open in IMG/M
3300009012|Ga0066710_104294779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6532Open in IMG/M
3300009038|Ga0099829_10770313Not Available799Open in IMG/M
3300009090|Ga0099827_10286074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61392Open in IMG/M
3300009090|Ga0099827_10929328All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300009094|Ga0111539_12171896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6644Open in IMG/M
3300009137|Ga0066709_100038293All Organisms → cellular organisms → Bacteria5222Open in IMG/M
3300009137|Ga0066709_102502282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6696Open in IMG/M
3300009137|Ga0066709_103100168Not Available608Open in IMG/M
3300009147|Ga0114129_11277677All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella911Open in IMG/M
3300009156|Ga0111538_11952083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6738Open in IMG/M
3300009162|Ga0075423_10947939All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis913Open in IMG/M
3300009162|Ga0075423_11468498All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis731Open in IMG/M
3300009162|Ga0075423_11525341All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300009553|Ga0105249_10461483All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1310Open in IMG/M
3300009553|Ga0105249_12132853All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300009792|Ga0126374_10058263All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2002Open in IMG/M
3300009822|Ga0105066_1153500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6529Open in IMG/M
3300010042|Ga0126314_10794228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6696Open in IMG/M
3300010043|Ga0126380_10391365All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300010043|Ga0126380_12128791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6517Open in IMG/M
3300010043|Ga0126380_12130347All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6517Open in IMG/M
3300010047|Ga0126382_12502894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6503Open in IMG/M
3300010329|Ga0134111_10515627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6526Open in IMG/M
3300010337|Ga0134062_10122478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61135Open in IMG/M
3300010359|Ga0126376_11102917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6802Open in IMG/M
3300010366|Ga0126379_12803407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6583Open in IMG/M
3300010366|Ga0126379_13352088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6536Open in IMG/M
3300010373|Ga0134128_10886527All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria988Open in IMG/M
3300010398|Ga0126383_10187053Not Available1975Open in IMG/M
3300012022|Ga0120191_10034299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6808Open in IMG/M
3300012198|Ga0137364_10094574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria2093Open in IMG/M
3300012205|Ga0137362_11204950Not Available641Open in IMG/M
3300012351|Ga0137386_10146515All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300012359|Ga0137385_10603345All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300012509|Ga0157334_1040998Not Available605Open in IMG/M
3300012918|Ga0137396_10768015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6709Open in IMG/M
3300012922|Ga0137394_10101706All Organisms → cellular organisms → Bacteria2422Open in IMG/M
3300012923|Ga0137359_10202198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61774Open in IMG/M
3300012929|Ga0137404_10413341All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai1192Open in IMG/M
3300012929|Ga0137404_11173941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6706Open in IMG/M
3300012944|Ga0137410_10028937All Organisms → cellular organisms → Bacteria3856Open in IMG/M
3300012948|Ga0126375_11952824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6517Open in IMG/M
3300012957|Ga0164303_11331675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6533Open in IMG/M
3300012984|Ga0164309_11760861All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6531Open in IMG/M
3300014150|Ga0134081_10321996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6560Open in IMG/M
3300015371|Ga0132258_11353955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61798Open in IMG/M
3300015372|Ga0132256_100341520All Organisms → cellular organisms → Bacteria1590Open in IMG/M
3300016294|Ga0182041_10484907All Organisms → cellular organisms → Bacteria → Proteobacteria1069Open in IMG/M
3300016294|Ga0182041_10979972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium763Open in IMG/M
3300016319|Ga0182033_11420499All Organisms → cellular organisms → Bacteria → Proteobacteria625Open in IMG/M
3300017659|Ga0134083_10260487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6728Open in IMG/M
3300018028|Ga0184608_10322910All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300018063|Ga0184637_10072865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_62104Open in IMG/M
3300018077|Ga0184633_10097182Not Available1521Open in IMG/M
3300018077|Ga0184633_10484970All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300018466|Ga0190268_10144224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61203Open in IMG/M
3300020018|Ga0193721_1039931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61239Open in IMG/M
3300025910|Ga0207684_10396091All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300025918|Ga0207662_11118554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6560Open in IMG/M
3300025922|Ga0207646_10838440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6818Open in IMG/M
3300026075|Ga0207708_11739742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6547Open in IMG/M
3300026118|Ga0207675_100539782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61164Open in IMG/M
3300026298|Ga0209236_1107278All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300026325|Ga0209152_10188250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6774Open in IMG/M
3300026528|Ga0209378_1197574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria673Open in IMG/M
3300027654|Ga0209799_1012720Not Available1816Open in IMG/M
3300027675|Ga0209077_1177294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6595Open in IMG/M
3300027875|Ga0209283_10011667All Organisms → cellular organisms → Bacteria5218Open in IMG/M
3300027907|Ga0207428_10245654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis → unclassified Chroococcidiopsis → Chroococcidiopsis sp. CCMEE 291336Open in IMG/M
3300027907|Ga0207428_10289778All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300027909|Ga0209382_10427103Not Available1472Open in IMG/M
3300027950|Ga0209885_1032693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6584Open in IMG/M
3300028587|Ga0247828_10832615All Organisms → cellular organisms → Bacteria → Proteobacteria588Open in IMG/M
3300028589|Ga0247818_11348655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6513Open in IMG/M
3300028889|Ga0247827_10205297All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1092Open in IMG/M
3300031094|Ga0308199_1077346All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300031547|Ga0310887_10678653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6638Open in IMG/M
3300031562|Ga0310886_10953032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6548Open in IMG/M
3300031777|Ga0318543_10196206All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300031820|Ga0307473_11213064Not Available561Open in IMG/M
3300031847|Ga0310907_10461575All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300031911|Ga0307412_12096152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6525Open in IMG/M
3300032075|Ga0310890_11783505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6511Open in IMG/M
3300032090|Ga0318518_10383702All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300032205|Ga0307472_100048140All Organisms → cellular organisms → Bacteria2634Open in IMG/M
3300032205|Ga0307472_101332736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6693Open in IMG/M
3300032205|Ga0307472_101753154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6615Open in IMG/M
3300032261|Ga0306920_104292814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6513Open in IMG/M
3300033290|Ga0318519_11076866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6501Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere16.54%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.51%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.01%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.01%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.01%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.26%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.50%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.50%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.50%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.75%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.75%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.75%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.75%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.75%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.75%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.75%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002896Soil microbial communities from Manhattan, Kansas, USA - Sample 300um NexteraEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009822Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012022Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012509Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027675Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027950Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10015031413300000955SoilMRTLKVHFPDDALPTLDTFLKQTKEARVFRRAQAVRNVVKGQRLQTVSDTLSFTYSALR
JGI24802J43972_101264913300002896SoilMRTLKLRFPDDALPTLDTFVKHTKDARVFRRAQAVRNVVKGQRLQTVSDVANSRPS*
Ga0063454_10194787113300004081SoilMRTLKLHFPDAALPTLDTYLKQTKEARIFRRAQAVREVVNGQRLQTVSDSLHFTY
Ga0066677_1007418513300005171SoilMRTLKLHFPDDALPTLDIFLQKTKEARVFRRVQAVRDVVQGRRLQTVSDTLHFTYSA
Ga0065705_1025289013300005294Switchgrass RhizosphereMRTLTLQFSDDALPTLKTFLKQTKEARVFRRAQAVREVVTGQRLQTVSD
Ga0065707_1032938413300005295Switchgrass RhizosphereMRTLTRHFPDDALPPFDTFIKQTKAARVCRRAQAGRHVVKGQRLH
Ga0066388_10148386313300005332Tropical Forest SoilMRTLKLHFPDDALPTLDTFVKQTREARVFRRAQAVREVVKGQRLQTVSDAL
Ga0066388_10606328113300005332Tropical Forest SoilMRTLKLHFPDDALPTLDSFLKQTKEARVFRRAQAVRNVVKGQRLQTVSDALQFTYSALRK
Ga0070708_10047513013300005445Corn, Switchgrass And Miscanthus RhizosphereMRTLKLHVPDEALPTLDTFLKQTKEARVFRRAQAVRDVVKGRRIQNVSDTLQSHVQGV*
Ga0066686_1090147913300005446SoilMRTLKLHFPDDALPTLDTVLKPTKEARVFRRAQAVREVVTGTRLQTVSDTLALTYS
Ga0066689_1105382223300005447SoilMRTLKLHLPDEALPTLDTYLQQTKAARVFRRAQAVREVVKGQRLHTVSDALHVPSA
Ga0070706_10035927013300005467Corn, Switchgrass And Miscanthus RhizosphereMRTLKLHFPDQALPTLDTFLKQTKEARIFRRAQAVREVVQGHRLQTVSDSLHFTYTYCMPL*
Ga0070706_10204378223300005467Corn, Switchgrass And Miscanthus RhizosphereMRTLTLHFPDDALPT*ETVLKQTKEARVFRRAQAVRDVVKGTRLHTVSETLAFPYSALRKWVYRFANQGPQG
Ga0070699_10124075823300005518Corn, Switchgrass And Miscanthus RhizosphereMRTLKLRFPDDALPTLDTFLKQTKEARIFRRAQAVRDVVKGQHLHTVSDALQFTYAALRKWVHRF
Ga0066692_1075972813300005555SoilMRTLKLHFPEDALPILDTFLKQTKEARVFRRAQAVREVVKGTRVQTVSDTLALTYSALRKWVYRFAN
Ga0066707_1059328113300005556SoilTMRTLKLHFPDEALPTLETFLKQTKEARVFQRAQAVREVVKGHRLQTVSDTLHFTYTYCMSRSNFFGGKQLRVL*
Ga0066704_1071090223300005557SoilMRTLKLHFPEQALPTLDTFLKQTKEARIFRRAQAVREVVQGHRLQTVSDSLHFTYSALRKWVHR
Ga0066698_1104925423300005558SoilMRTLQLHFSDNAFPTLNTFLQQTKEARVFRRAQAVRDVVTGQRLQTVSDTLHLTSSALRKWV
Ga0066670_1047287413300005560SoilMRTLKLHFPDDALSTLDTFLKQTTEARVFRRAHAVRQVVKGQRLQTVSDTLQFT
Ga0066691_1089495823300005586SoilMRTLQLHFPDDALPTLDTVLKQTKEARVFRRAQAVREVVKGTRLQTVSDTLAFTYS
Ga0066706_1007540553300005598SoilHFSEDALPTLDTFLKRAKEARVFRRAQAVRDVVQGQRLQTVSETLHFTY*
Ga0066903_10741581613300005764Tropical Forest SoilMPCTAKLHFPDDALSTLETFLKQTKEARVFRRAQAVRAVVTGHRLPTVSDTVHFAYSALRKWGYRFAHHGVHSLSDR
Ga0068858_10028131843300005842Switchgrass RhizosphereMRTLKLHFPEQALPTLDTFLKQTKEARLFRRAQAVREVIQGQRLQTVSDSLHFTYSALRKWVHR
Ga0075287_103063223300005873Rice Paddy SoilMRTLKLHFPDDALPTLETFLKKTKEARVFRRAQAVRDVVKGQRLHMVSDTLHLT
Ga0081538_1026574723300005981Tabebuia Heterophylla RhizosphereMRTLKLHFPDDALSTLDTFLKQTKEARVFRRAQAVRNVVKGQRLQTVSDALSFPYSALRKWVYRFASH
Ga0075417_1050387723300006049Populus RhizosphereMRTLKLRFPDDALSTLETFLKQPKEARGFRRTQAVRAVVKGQRLQTVSDTLSFTY
Ga0075427_1000921023300006194Populus RhizosphereMRTLKLHFPPDALSTLDTFVKQTKEARVFRRAQAVRAVVQGQRLQTVSDTLQFTYSA
Ga0066665_1101287213300006796SoilMRTLQLHFSDNALPTLNTFLQQTKEARVFRRAQAVRDVVTGQRLQTVSDTLHLTSSALRKWV*
Ga0066660_1140477413300006800SoilMRPLKSHFPAHALLTLETVLKQTQEARVFRRAQAVRDVVKGQRLQTVSDTLSFTYSALRKWVHR
Ga0075428_10108772423300006844Populus RhizosphereMRTLKLHFPDEALPTLDTFLKQTKEVRVFRRAQAVRDVVQGQRLQTVSNTL
Ga0075430_10160816923300006846Populus RhizosphereNKESTLMRTIKLQFADSAVPTLDTFIKQTKEARLFRREQAVREVVKGQRLQRVAL*
Ga0075431_10034148113300006847Populus RhizosphereMRTLTLQFPDDALPTLDTFLQQTQEARIFRRAQAVRAVVKGQRLQTVSDALQFPYSALRKWVY
Ga0075420_10085231713300006853Populus RhizosphereMRTLKLPFPDNALPTVDTFLKQTTEARVFRRAQAVRAVVKGRRIPNVSDALQLTYSALR
Ga0075429_10153773913300006880Populus RhizosphereRPAARSMCVISVVYNKESTLMRTIKLQFADSAVPTLDTFIKQTKEARLFRREQAVREVVKGQRLQRVAL*
Ga0075424_10152325723300006904Populus RhizosphereMRTLKLHFPDDALPTLDAVLKQTKEARVFRRAQAVREVVKGTRLQTVSDTLALTYSALRKWVYR
Ga0075435_10036549233300007076Populus RhizosphereMRTLQLQFPDDALPTLHSVLHQTKDVRVFRRAQAVREVVKGHRLQTVSDTLE
Ga0075435_10099104623300007076Populus RhizosphereMRTLTLHFPEDALPTLDTFLKQTKAARVFRRAQAVRDVVKGQRLQTVSDTLQFTYS
Ga0075435_10155836913300007076Populus RhizosphereMRTLKLHFPEQALPTLETFLKQTKEARVFRRAQAVCEVVKGHRLQAVSDSLHFPYAALRKWVHRFANQ
Ga0075435_10189789423300007076Populus RhizosphereMRTLKLHFPNDALSTLDTFVKQTKEARVFRRAQAVRAVVQGQRLQTVSDTLQFTYSAL
Ga0075435_10206339323300007076Populus RhizosphereMRTIQLHFPADALSTLDTVLKQTKEVRVFRRAQAVREVVKGTRLQTVSDTRTFTYSALRT
Ga0099791_1004107643300007255Vadose Zone SoilMRTLKLHFPNDALPTLDTFLKQTKEARGFRRAQAVREVVKGTRLQTVSDTLALT
Ga0099791_1061642613300007255Vadose Zone SoilMRTLQLHFPEDALPTLDTVLKQTKEARVFRRAQAVREVVKGTRLQTVSDT
Ga0066710_10026683823300009012Grasslands SoilMRTLKLHFPDEALPTLDTYLKQTKEARVFRRAQAVREVVKGQRLQTVSDALHFTYSALR
Ga0066710_10229626713300009012Grasslands SoilMRTLKLHFPDEALPTLETFLKQTKEARVFRRAQAVREVVKGHRLQTVSDTLHFTYTYCMSRSNFFGGK
Ga0066710_10429477913300009012Grasslands SoilMRILKLHFPDDALPTLDTFLKQTKEARVFRRAQAVRDVVKGQRLQTVSDTLSFT
Ga0099829_1077031313300009038Vadose Zone SoilMRTLKLHFPDDALPTLDTFLKQTKEARVFRRTQAVREVVKGQRLHTVSDTLSFTYSALRK
Ga0099827_1028607413300009090Vadose Zone SoilMRTLTLHFPDDARPTLATFLQQTKEARVFRRAQAVRDVVKGRRIPNVSDALQCTSAALRTWVPRFANQGTQG*
Ga0099827_1092932833300009090Vadose Zone SoilILETPLMRTLKLHFPDDALSTLDTFLQQTKEARVFRRAQAVREVVKGQRLQTVSDTLYFTWP*
Ga0111539_1217189613300009094Populus RhizosphereMRTLKLHFPDTALPTLDTFLKQTKEARVFRRAQVVREVVKGHRLQTVSDTLHFTSSALRKWVH
Ga0066709_10003829353300009137Grasslands SoilMRTLKLHFPDEALPTLDTFLKQTKEARVFRRAQAVREVVKGQRLQTVSDTLHFRP*
Ga0066709_10250228213300009137Grasslands SoilMRTLKLHFPDEALPTLETFLKQTKEARVFQRAQAVREVVKGHRLQTVSDTLHFTYTYCMSRSNFFGGKQLRVL*
Ga0066709_10310016813300009137Grasslands SoilMRTLQLHFSDNAFPTLNTFLQQTKEARVFRRAQAVRDVVTGQRLQTVSDTLHLT
Ga0114129_1127767713300009147Populus RhizosphereMRTLKLHFPNDALSTLDTFVKQTKEARVFRRAQAVRAVVQGQRLQTVSDT
Ga0111538_1195208313300009156Populus RhizosphereMRTLKLHFPDDALPTLDSFLKQTKEARVFRRAQAVREVVQGHRLQTVSDTRHFPYSALRKWVYRFAHHG
Ga0075423_1094793913300009162Populus RhizosphereMRTLTVHLPDDALPTLDTFLKQTTEARICRRAQAVRDVVTGHRLQTVSNT
Ga0075423_1146849813300009162Populus RhizosphereMRTLQLHFPDNALPTLDTVLKQTKEARVFRRAQAVREVVKGTRLQTVSETIAFTYSALRKWVYRFANQ
Ga0075423_1152534113300009162Populus RhizosphereMRPLTLHFSHDALPTLETFLQQTKEARVFRRAQAVREVVKGQRLQTVSDTLPFTYAALRTWVQR
Ga0105249_1046148313300009553Switchgrass RhizosphereMRTLKLHFPDDALPTLDTCLKKTKEARIFRRAQAVRDVVKGQRLQTVSDTL
Ga0105249_1213285313300009553Switchgrass RhizosphereMRPLQLHFPNDALSALDTVLKQTKEARVFRRAQAGREVVTGTRLQTVSDTLAFTYAALSKWVQRFANEGRQ
Ga0126374_1005826323300009792Tropical Forest SoilMRTLKLHFTDDALPTLNTFLKQTKEARIFRRAQAVRDVVQGQRLQTVSDTLHFT
Ga0105066_115350023300009822Groundwater SandMLETTIMRTRKLHFSEDALPTFDTFLKRTAEARVFRRAQAVRDVVTGQRLQTVSETR
Ga0126314_1079422823300010042Serpentine SoilMRTLKLRFPDDALPTLDTFVKHTKDARVFRRAQAVRNVVKGQRLQTVSDTLQF
Ga0126380_1039136513300010043Tropical Forest SoilMRTLKLHFPDQALPTLETFLKQTKEARIFRRAQAVRAVVQGRRLPTVSDSLHFTYSALRKWVYR
Ga0126380_1212879113300010043Tropical Forest SoilMRTLTLRFPDDALPTLDTFLKQTKEARVFRRAQAVRDVVKGQRLQHVSDVL*
Ga0126380_1213034713300010043Tropical Forest SoilMRPRKLHFPDDALPTLDTVVKQTKEARVFRRAQAVRNVVKGQRLHTVSEALQCTYAALRKWGYRFASQGTPGLV
Ga0126382_1250289413300010047Tropical Forest SoilMRTLKLHFPDEALPTLDTLLKQTKEARLFRRAQAVREVVKGQRLQTVSDALHFTYS
Ga0134111_1051562713300010329Grasslands SoilMRTLKLRFPDDALSALDTFLKQTKEARGFRRTQAVREVVKGQRRQTVSDTLSFTYSALRKWVHRFA
Ga0134062_1012247813300010337Grasslands SoilMRTLKLRFPDDALSALDTFLKQTKEARVFRRTQAVREVVKGQRLQTVSDTLSLALQPLTPENLR*
Ga0126376_1110291713300010359Tropical Forest SoilMRTLKLHFPDNALPTLESFLKQTKEARIFRRAQAVREVVQGHRLQTVSDSLHFTYSAL
Ga0126379_1280340713300010366Tropical Forest SoilMRTLQLQFPDDALPTLEAFLKQTKEARVFRRAQAVREVVTGHRLQTVSDTLLFTSSALRKWV
Ga0126379_1335208813300010366Tropical Forest SoilMRTLKLHFPADALPTLDTFVRQSRAARVFRRAQAVREVVKGQRLQTVSDTF
Ga0134128_1088652723300010373Terrestrial SoilMRTLKLHFPDQALPTLDTFLKQTKEARIFRRAQAVREVVQGHRLQTVSDSLHFTYSALRK
Ga0126383_1018705323300010398Tropical Forest SoilMRPLRLHFADDALPTLDTFLKQTKEARVFRRAQAVREVIKGHRLQKVSDTLQFT*
Ga0120191_1003429923300012022TerrestrialMRTLKLHFPDQALPTLDTFLKQTKEARIFRRAQAVREVVKGHRLQTVSDSL
Ga0137364_1009457433300012198Vadose Zone SoilMRTLKLHFPDDALPTLDTVLKPTKEARVFRRAQAVREVVTGTRLQTVSDTLAFPSSARRKWVYRFANQ
Ga0137362_1120495013300012205Vadose Zone SoilMRTLTLHFPDDALPTLDTFLKQTKEARVFRRAQAVRDVVKGRRMQNVSDALQLTYSA
Ga0137386_1014651513300012351Vadose Zone SoilMRTLKLHFPDDALPTLDTVLKPTKEARVFRRAQAVREVVTGTRLQTVSDTLAFPSSARRKWVYRFANQGPQG
Ga0137385_1060334513300012359Vadose Zone SoilMRTLKLHFPNDALPPLDTLLKQTKEARVFRRAQAVREVVTGQRLPTVSDTLP
Ga0157334_104099813300012509SoilMRTLKLHFPADALPTLDTFVKQTKEARVFHRAQAVRHVVKGQRLQTVSDALSFTYS
Ga0137396_1076801513300012918Vadose Zone SoilMRTLKLHFPDDALPTLDTFLKQTKEARVFRRAQAVREVVKGTRLQTVSDTL
Ga0137394_1010170633300012922Vadose Zone SoilMRTLTRQLSDAALPTLGRFIKQTKTARIFRRAQTVREVITGQRLQSLW*
Ga0137359_1020219813300012923Vadose Zone SoilMRTLKLHFSEDALPTLDTFLKRAKEARVFRRAQAVRDVVQGQRLQTVSETLH
Ga0137404_1041334123300012929Vadose Zone SoilMNFCSSFFLETPTMRTLKLHFPDQALPTLDTFLKQTKEARIFRRAQAVREVVNGHRLQTVSDSLHLTYAALRKWVHRFA
Ga0137404_1117394123300012929Vadose Zone SoilMRTLQLHCPDDALLTLDTGWKQTKEARVLRRAHAVRAVVQGPRLPTVSAPLALTYAALRKGVSRCANQGPQGLRDRPRSGRPPQGTCAGDQ
Ga0137410_1002893743300012944Vadose Zone SoilMRLLKLHFPAQALPPLDPCLKQTKEARLFRRAQAVRAVVQGHRLHTGSDSLHFT*
Ga0126375_1195282413300012948Tropical Forest SoilMRTLKLHFPDDALPILDTFLKKTKEARVFRRAQAVRDVVKGQRLQTVSDTLHFTY
Ga0164303_1133167513300012957SoilMRTLKLHFPDDALPTLDTCVKQTREARVFRRAQSVRDVVKGQRLQTVSYALSFTSSALRKWVYRFANHGTQGLVD
Ga0164309_1176086123300012984SoilMRTLKLHFPEQALPTLETFLKQTKEARVFRRAQAVCEVVKGHRLQTVSDSLHFT
Ga0134081_1032199613300014150Grasslands SoilMRTLQLHFPEDALPTLDTGLKQTKEARVFRRAQAVREVVKGTRLHTVSDTLALTYSALRKWVYRFAN*
Ga0132258_1135395513300015371Arabidopsis RhizosphereMRTLKLHFPEDALPTLDTFLKQAKAARVFRRAQAVRDVVKGQRLQTVSDTLQFTYSALRKWVYR*
Ga0132256_10034152013300015372Arabidopsis RhizosphereMRTRKLHLPDAALPPFDTCVKQAKEARVFRRAQGVRHVVQGPRLQTVSDARQFLSSALRTWLYRLA
Ga0182041_1048490733300016294SoilMRTLKLHFPNEALPTLEAFLKQTKEARVFRRAQAVREVVQGQRLQTVSDTLHFTYAALRKWGHR
Ga0182041_1097997223300016294SoilMRTLKLRFPDGALPTLDTFVKQTKEARVFRRAQAVREVVKGQRLQTVSETLDFAYAA
Ga0182033_1142049923300016319SoilMRTLKLHFPDQALPTLDTFLKQTKEARVFRRAQAVREVVKGQRLQTVSD
Ga0134083_1026048713300017659Grasslands SoilMRTLQLHFPDDALPTLDTVLKQTKEARVFRRAQAVREVVKGQRLQTVSDTLALTYSALRKWVYRFAN
Ga0184608_1032291013300018028Groundwater SedimentMRTLQLHFPDDALPTLDTVLKQTKEARVFRRAQAVREVVKGTRLHTVSDTLALTYSALRKWVYRF
Ga0184637_1007286523300018063Groundwater SedimentMRTLKLHFPDDALPTLETCLKQTKEARVFRRAQAVREVVKGQRLHTVSNTLHFP
Ga0184633_1009718213300018077Groundwater SedimentMRTLKLHFPDDALPTLETCLKQTKEARVFRRAQAVREVVTGHRLQTVSDTLHFTYSALRK
Ga0184633_1048497023300018077Groundwater SedimentMRTLKRHFPEDALPPLATFLKQTKEARVFRRAQAVRDVVQGHRLHTVSTT
Ga0190268_1014422433300018466SoilMRNLNLQFPDDALSKLDAFLKETKQARLFRRAQAVREVVKGTRMQVVSNRFDFAYSAVRK
Ga0193721_103993123300020018SoilMRTFTLHFSEDALPTLDTFLKRTQEARVFRRAQAVREVVTGQRLQTVSDSLHLT
Ga0207684_1039609133300025910Corn, Switchgrass And Miscanthus RhizosphereMRTLKLHVPDDALSTLDTFVKQTKEARVFRRAQAVRNVVQGQRLQTVSDALSFT
Ga0207662_1111855413300025918Switchgrass RhizosphereMRTLKLHFPDQALPTLDTFLKQTKEARIFRRAQAVREVVQGHRLQTVSDSLHFT
Ga0207646_1083844013300025922Corn, Switchgrass And Miscanthus RhizosphereMRTLKLHFPDQALPTLDTFLKQTKEARIFRRAQAVREVVQGHRLQTVSDSLHFTYTYCMP
Ga0207708_1173974213300026075Corn, Switchgrass And Miscanthus RhizosphereMRTLKLHVPEAALPTFDTFLKQTKEARVFRRAQAGRAVVKGPRIHNVSDALQLTSSALRQWGHRLANQGSKGLGERPRSGRPPTVT
Ga0207675_10053978223300026118Switchgrass RhizosphereMRTLKLHFPDNALPTLDTFLKQTKEARVFRRAQAVREVVKGHRLQTVSDTL
Ga0209236_110727813300026298Grasslands SoilMRTLKLHFPDEALPTLDTYLKQTKAARVFRRAQAVREVVKGQRLQTVSDALHFTYSALRK
Ga0209152_1018825013300026325SoilMRTLKLHFPDAALPTLDTYLKQTKEARIFRRAQAVREVVNGQRLQTVSNSLHFTYSALRKWVHRTSRTHSHTPL
Ga0209378_119757423300026528SoilMRTLKLHFPDDTLPTLETFLKQTKEARVFRRAQAVREVVKGHRLQTVSDTLHFAQFIAVCRRSN
Ga0209799_101272023300027654Tropical Forest SoilMRTLKLHFPDDALPTLDTFVKQTREARVFRRAQAVREVVKGQRLQTVSD
Ga0209077_117729413300027675Freshwater SedimentMRPLTLHFPDDALPTLDTFVKQTKAARVFRRAQAVRAVVKGQRLQTVSDALQFTSSAPTTWGGCQR
Ga0209283_1001166713300027875Vadose Zone SoilMRTLKLHFPDDALPTLDTFLKQTKEARVFRRAQAVREVVKGHRLQTVSDTLAFTYSALRKWVHRF
Ga0207428_1024565433300027907Populus RhizosphereMRTRKLPFPTDALPSLDRFFKQTKEVRVCRRAQAVRAVVVGQRLQTVSDTLPFP
Ga0207428_1028977813300027907Populus RhizosphereMRTLQLHFPNDALATLDTVLKQTKDARVFRRVQAVREVVKGTRLQTASDTLAF
Ga0209382_1042710313300027909Populus RhizosphereMRTLQLRFPDDALSTLDTFVKQTKAARVFRRAQAVREVVKGQRLQTVSDTLSFTYSALRK
Ga0209885_103269323300027950Groundwater SandMRTLTLHFPDDALPTCDTFLKQTKEARGFRRAQAVREVVKGQRLQTVSDTLAFTYSALRKWVYRFAHQGP
Ga0247828_1083261513300028587SoilMRTLKLHFPDDALPTLDTFLKQTKAARVFRRAQAVRNVVKGQRLQTVSDALQFTYSALRTWVHR
Ga0247818_1134865513300028589SoilMRTLKLHFPDDALPALDTFLKKTKEARVFRRVQAVRDVVKGQRLQTVSDTLHFTYSALRKGVYRFAHQ
Ga0247827_1020529723300028889SoilMRTLKLHFPAQALPTWETFLKQTKEARIFRRAQAVREVVQGHRLQTVSDSLHFTY
Ga0308199_107734623300031094SoilFPDDALPTLDTVLKQTKEARVFRRAQAVREVVKGTRLQTASDTLAFTYSALRIV
Ga0310887_1067865313300031547SoilMRTLKLRFPDDALPTLATFLKQTKEARVFRRAQAVCEVVKGQRLQTVSDTLSFTYSALRKWVHRFAHQGTPGL
Ga0310886_1095303213300031562SoilMRTLKLHFPDDALPPLDTCLKQTKAARVFRRAQAVRNVVKGQRLQTVSDALQLTYSALRTWV
Ga0318543_1019620633300031777SoilMRTLKLHFPDDALPTLDTFVKQTTEARVFRRAQAVREVVKGQRLQTVSDALAFTYSALRKWVHR
Ga0307473_1121306423300031820Hardwood Forest SoilMRTLKLPFPDDALPTLDTFLKQTKEARGFRRVQAVRHVVKGQRLQTVSDALQ
Ga0310907_1046157523300031847SoilMYGNEFLPAFFLETCPMRTLKLHFPDDALPTLDSFLKQTKEARVFRRAQAVREVVQGHRLQTVSDTRHFPYSALRKWVYRFAHHGV
Ga0307412_1209615213300031911RhizosphereMRTLKLHFPDDALPTLDTFLKQTKAARVFRRAQAVRNVVKGQRLQTVSDALQFTSSALR
Ga0310890_1178350523300032075SoilMRTLKLRFPDDALPTLATFLKQTKEARVFRRAQAVCEVVKGQRLQTVSDTLSFTYSALRKWVHRFA
Ga0318518_1038370213300032090SoilMRTLKLHFPDEALPTLDTFLKKTKEARVFRRAQAVRDVVRGQRLQTVSDTLHFTYSALRK
Ga0307472_10004814013300032205Hardwood Forest SoilMRTLRLHFPNDALPTLDTFIKQTKEARVFRRAQAVRNVVKGQRLQTVSDALSFTYSALRK
Ga0307472_10133273613300032205Hardwood Forest SoilMRTLKLHFPDDALPTLDTFLKQTKEARVFRRVQAVRNVVKGQRLQTVSDALQFTY
Ga0307472_10175315413300032205Hardwood Forest SoilMRTLKLHFPDDALSTLDIFLKQTKEARVFRRAQAVRNVVKGQRLQTVSDALSFTYSALR
Ga0306920_10429281413300032261SoilMRTLQLHFADDALPTLDMALKQTKDARIFRRAQAVREVVKGQRLQTVSDSLQLTYAALRKWGYRFANQGPQGRLDRPRSG
Ga0318519_1107686613300033290SoilMRTLKLRFPDDALPTLDTFIKQTKEARVFRRAQAVRHVVKGQRLQTVSDALSFT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.