Metagenome Family F060113

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060113
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	88 residues
Representative Sequence	MIWFFERPGERLQCEIRQAASGPGYELVWTSSDGRIHVELSDDASELIRRRRALEHWLKLDGWIRPGRVTPIRPPRHQRTRKTDTQLH
Number of Associated Samples	106
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.63 %
% of genes near scaffold ends (potentially truncated)	21.05 %
% of genes from short scaffolds (< 2000 bps)	80.45 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.992 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.541 % of family members)
Environment Ontology (ENVO)	Unclassified (24.812 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.609 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.52% β-sheet: 25.00% Coil/Unstructured: 59.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF02618	YceG	51.13
PF00440	TetR_N	6.02
PF03652	RuvX	3.01
PF13305	TetR_C_33	3.01
PF10671	TcpQ	1.50
PF11667	DUF3267	0.75
PF08241	Methyltransf_11	0.75
PF13180	PDZ_2	0.75
PF00486	Trans_reg_C	0.75
PF03219	TLC	0.75
PF02371	Transposase_20	0.75
PF00392	GntR	0.75
PF02321	OEP	0.75
PF05656	DUF805	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1559	Endolytic transglycosylase MltG, terminates peptidoglycan polymerization	Cell wall/membrane/envelope biogenesis [M]	51.13
COG0816	YqgF/RuvX protein, pre-16S rRNA maturation RNase/Holliday junction resolvase/anti-termination factor	Translation, ribosomal structure and biogenesis [J]	3.01
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.50
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	0.75
COG3202	ATP/ADP translocase	Energy production and conversion [C]	0.75
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.99 %
Unclassified	root	N/A	3.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.99 %
Unclassified	root	N/A	3.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.99 %
Unclassified	root	N/A	3.01 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.21 %
Unclassified	root	N/A	3.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.26 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	80.45 %
Unclassified	root	N/A	3.01 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.45 %
Unclassified	root	N/A	3.01 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.45 %
Unclassified	root	N/A	3.01 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.45 %
Unclassified	root	N/A	3.01 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.45 %
Unclassified	root	N/A	3.01 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_10187043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2570	Open in IMG/M
3300000956\|JGI10216J12902_101056262	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300000956\|JGI10216J12902_106528878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1660	Open in IMG/M
3300000956\|JGI10216J12902_106763789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300000956\|JGI10216J12902_107524500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2941	Open in IMG/M
3300000956\|JGI10216J12902_110085039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300000956\|JGI10216J12902_110179726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2008	Open in IMG/M
3300000956\|JGI10216J12902_111290763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300000956\|JGI10216J12902_112741751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300000956\|JGI10216J12902_113700971	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300003310\|D1draft_1004637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7658	Open in IMG/M
3300004153\|Ga0063455_100080314	All Organisms → cellular organisms → Bacteria → Acidobacteria	1260	Open in IMG/M
3300004157\|Ga0062590_102261062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300004463\|Ga0063356_100293152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2010	Open in IMG/M
3300004463\|Ga0063356_101064865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1161	Open in IMG/M
3300004480\|Ga0062592_101560340	Not Available	636	Open in IMG/M
3300004643\|Ga0062591_100823591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300005167\|Ga0066672_10361065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300005176\|Ga0066679_10472440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300005177\|Ga0066690_10443015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300005184\|Ga0066671_10400727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300005331\|Ga0070670_100364383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300005332\|Ga0066388_100898953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1464	Open in IMG/M
3300005444\|Ga0070694_101725792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005447\|Ga0066689_10331660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300005451\|Ga0066681_10297299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300005456\|Ga0070678_102273690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300005471\|Ga0070698_100575686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1066	Open in IMG/M
3300005545\|Ga0070695_101538547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300005559\|Ga0066700_10393031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300005561\|Ga0066699_10032417	All Organisms → cellular organisms → Bacteria	3043	Open in IMG/M
3300005569\|Ga0066705_10613920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300005840\|Ga0068870_11197648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300006034\|Ga0066656_10704216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300006042\|Ga0075368_10391578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300006046\|Ga0066652_100096480	All Organisms → cellular organisms → Bacteria	2374	Open in IMG/M
3300006195\|Ga0075366_10091898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1818	Open in IMG/M
3300006806\|Ga0079220_10927776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300006844\|Ga0075428_100000085	All Organisms → cellular organisms → Bacteria	78003	Open in IMG/M
3300006854\|Ga0075425_100101257	All Organisms → cellular organisms → Bacteria	3275	Open in IMG/M
3300006876\|Ga0079217_10361104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300006876\|Ga0079217_10984935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300006894\|Ga0079215_10255225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300006894\|Ga0079215_10678340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300006904\|Ga0075424_100286033	All Organisms → cellular organisms → Bacteria → Proteobacteria	1754	Open in IMG/M
3300006918\|Ga0079216_10061372	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300006918\|Ga0079216_10570595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300007004\|Ga0079218_10400592	Not Available	1168	Open in IMG/M
3300007004\|Ga0079218_11719607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300007004\|Ga0079218_12174052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300009012\|Ga0066710_100508728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1816	Open in IMG/M
3300009078\|Ga0105106_10190953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1497	Open in IMG/M
3300009087\|Ga0105107_10053961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2838	Open in IMG/M
3300009087\|Ga0105107_10402460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300009088\|Ga0099830_11242866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300009553\|Ga0105249_11185498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300009609\|Ga0105347_1008927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3474	Open in IMG/M
3300009610\|Ga0105340_1009255	All Organisms → cellular organisms → Bacteria	3908	Open in IMG/M
3300009840\|Ga0126313_11587746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300009987\|Ga0105030_126540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300010037\|Ga0126304_10124538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1649	Open in IMG/M
3300010045\|Ga0126311_11239203	Not Available	618	Open in IMG/M
3300010159\|Ga0099796_10491375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300010399\|Ga0134127_10187814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1911	Open in IMG/M
3300011433\|Ga0137443_1009007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2357	Open in IMG/M
3300011439\|Ga0137432_1005146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3603	Open in IMG/M
3300012043\|Ga0136631_10045642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1628	Open in IMG/M
3300012093\|Ga0136632_10525822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300012208\|Ga0137376_11136948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300012530\|Ga0136635_10095343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300012930\|Ga0137407_10200689	Not Available	1788	Open in IMG/M
3300015258\|Ga0180093_1139884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300015264\|Ga0137403_11547123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300015360\|Ga0163144_10113158	All Organisms → cellular organisms → Bacteria	4221	Open in IMG/M
3300017695\|Ga0180121_10083580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1140	Open in IMG/M
3300017789\|Ga0136617_10081901	All Organisms → cellular organisms → Bacteria	2812	Open in IMG/M
3300017792\|Ga0163161_10832760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300017965\|Ga0190266_10558016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300018027\|Ga0184605_10259081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300018072\|Ga0184635_10000870	All Organisms → cellular organisms → Bacteria	8226	Open in IMG/M
3300018422\|Ga0190265_11851635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300018429\|Ga0190272_10148869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300018429\|Ga0190272_10849491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300018429\|Ga0190272_11341003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300018432\|Ga0190275_10041021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3803	Open in IMG/M
3300018466\|Ga0190268_12092696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018469\|Ga0190270_10374713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300018469\|Ga0190270_10498033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300018469\|Ga0190270_11438059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300018476\|Ga0190274_12118142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300018481\|Ga0190271_10250233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1804	Open in IMG/M
3300019377\|Ga0190264_11029263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300019377\|Ga0190264_12318578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300019884\|Ga0193741_1034781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1300	Open in IMG/M
3300019884\|Ga0193741_1048662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300020057\|Ga0163151_10262953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300021080\|Ga0210382_10433574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300023066\|Ga0247793_1012218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300023072\|Ga0247799_1086701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300025922\|Ga0207646_10320037	All Organisms → cellular organisms → Bacteria → Acidobacteria	1402	Open in IMG/M
3300025925\|Ga0207650_10941415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300025930\|Ga0207701_10147509	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300025930\|Ga0207701_11404860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300026075\|Ga0207708_11997508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300026118\|Ga0207675_101228562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300026118\|Ga0207675_101263045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300026312\|Ga0209153_1211054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300026325\|Ga0209152_10326797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300027533\|Ga0208185_1132885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300027639\|Ga0209387_1030271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300027639\|Ga0209387_1123601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300027639\|Ga0209387_1250637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027691\|Ga0209485_1110205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300027818\|Ga0209706_10032948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2628	Open in IMG/M
3300027818\|Ga0209706_10429425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300027886\|Ga0209486_10680311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300027907\|Ga0207428_10000195	All Organisms → cellular organisms → Bacteria	84698	Open in IMG/M
3300027979\|Ga0209705_10310382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300028799\|Ga0307284_10069157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300028824\|Ga0307310_10590079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300030606\|Ga0299906_10046545	All Organisms → cellular organisms → Bacteria	3458	Open in IMG/M
3300031229\|Ga0299913_11740321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300031455\|Ga0307505_10340766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300031562\|Ga0310886_10575593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300031824\|Ga0307413_10924791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300031824\|Ga0307413_11123884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300031892\|Ga0310893_10126162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300032003\|Ga0310897_10146006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300033521\|Ga0316616_102004217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300034128\|Ga0370490_0008572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3566	Open in IMG/M
3300034148\|Ga0364927_0008322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2159	Open in IMG/M
3300034151\|Ga0364935_0031811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1483	Open in IMG/M
3300034760\|Ga0334948_050526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.96%
Host-Associated	Host-Associated	14.29%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.42%
Aquatic	Environmental → Aquatic	16.54%
Plants	Host-Associated → Plants	14.29%
Bioreactor	Engineered → Bioreactor	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.92%
Freshwater	Environmental → Aquatic → Freshwater	10.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.52%
Sediment	Environmental → Aquatic → Sediment	6.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.26%
Floodplain	Environmental → Terrestrial → Floodplain	1.50%
Roots	Host-Associated → Plants → Roots	1.50%
Unclassified	Engineered → Bioreactor → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.02%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.26%
Loam	Environmental → Terrestrial → Soil → Loam	5.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.51%
Ice	Environmental → Aquatic → Freshwater → Ice	3.76%
Lake	Environmental → Aquatic → Freshwater → Lake	1.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.50%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.50%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	15.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.02%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.51%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	3.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.50%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.50%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	11.28%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.51%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.51%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	3.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.01%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.26%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.50%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Down-Flow Hanging Sponge Reactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003310	Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - L1-648F-DHS	Engineered	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009987	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034760	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0504.00008140	2162886013	Switchgrass Rhizosphere	MIWFFERPGERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRTTPTRPPRHLRTRKTDKRLH
JGI10216J12902_1010562623	3300000956	Soil	MIWFFERPGERLQCEIRQSASGSGFELVWTSSDGRIHVELSNDASELIRRRRALEHWLKLDGWIRPGRITPVRPPRPERTRKTDVQLH*
JGI10216J12902_1065288783	3300000956	Soil	MIWFFERPGERLQCEIRQAASGPGYELVWTSSDGRIHVELSNDPSELIRRRRALEHWLKLDGWIRPGRVTPLRPHRNLRTRKTDALSH*
JGI10216J12902_1067637892	3300000956	Soil	MIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHIELSDDASELIRRRRALEHWLRLDGWIRPGRVTPTHPPRTERTRKTDVPMH*
JGI10216J12902_1075245004	3300000956	Soil	MIWFFERPGERLQCEIRQAASGPGYELVWTSSDGRMHIEISDDPSELIRRRRALEHWLKLDGWTRPGRVTPRRPDRNERTRKTDLRLN*
JGI10216J12902_1100850392	3300000956	Soil	MIWFFERPGERLQCEIRQASSGSGYELVWTSSDGRIHVEISDDPSELIRRRRALEHWLKLDGWIRPGRVTPPRPLRTARTRKTDVQMH*
JGI10216J12902_1101797262	3300000956	Soil	MIWFFERPGERLQCEIRQAASGSGFELVWTSSDGRIHIEMSDDSAELLRRRRALEHWLKLDGWVRPDRVTPQPTLQQRAVRTGHTDRPIN*
JGI10216J12902_1112907632	3300000956	Soil	MIWFFQRPGERLQCEIRQAPSGPGYELVWTSSDGRMHVELSDDPTELIRRRRALEHWLTLDGWIRPGRITPLRPFATERNRKTDARSH*
JGI10216J12902_1127417512	3300000956	Soil	MIWFFERLGERLQCEIRQAASGAGYELVWTSNDGRVHVELSDDASELIRRRRALEHWLRLDGWIRPGRVTPTHPPRTERTRKTDSPMH*
JGI10216J12902_1137009713	3300000956	Soil	MIWFFERPGERLQCEIRQTLSGQGFELVWTSSDGRIHVEVSSDASELIRRRRALEHWLKLDGWIRPGRVTPVRPPRNQRTRKSDAQLH*
D1draft_10046378	3300003310	Down-Flow Hanging Sponge Reactor	MIWFFERPGERLQCEIRQASSGSGFELVWTSNDGRVHVELSDDPSELLRRRRALEHWLKLDGWIRPGRVTPVRPPRALRTRRTDQHLH*
Ga0063455_1000803143	3300004153	Soil	MIWFFERPGERLRCEIRQSMTVGYDLIWTTGDGRTHTEHSRNPEDLLHRRRALENWLKLDGWVRPGRITPPATPRPATRPQTEWRVRKAELH*
Ga0062590_1022610621	3300004157	Soil	MIWFFERPGERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRTTPTRPPRHLRTRKTDKRLH*
Ga0063356_1002931523	3300004463	Arabidopsis Thaliana Rhizosphere	MIWFFERPGERLRCEIRQVASGTGFELVWTASDGRIHVEVSDDPSELLRRRRALEHWLKLDGWVRPDRITPPRPGRHLRTRKTDIAGSSQ*
Ga0063356_1010648652	3300004463	Arabidopsis Thaliana Rhizosphere	MIWFFERPGERLQCEIRQAASGSGYELVWTSSDGRIHVELSDDASELMRRRCALEHWLKLDGWIRPGRDTPNRPFRTERTRKTDARLH*
Ga0062592_1015603401	3300004480	Soil	EIRQAASGAGYELVWTSNDGRVHVELSDDASELIRRRRALEHWLRLDGWIRPGRVTPTHPPRTERTRKTDSPMH*
Ga0062591_1008235912	3300004643	Soil	KVFVKACWLIIHPPIGWRMIWFFERPGERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRTTPTRPPRHLRTRKTDKRLH*
Ga0066672_103610651	3300005167	Soil	GERLQCEIRRSAAGHGYELIWSAGDGRMHVEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRQNTKPRSEWKQRKSDMH*
Ga0066679_104724402	3300005176	Soil	MIWFFERPGERLQCEIRRTAAGHGYELIWSAGDGRMHVEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRQNTKPRSEWKQRKSDVH*
Ga0066690_104430151	3300005177	Soil	MIWFFERPGERLQCEIRRSAGGHGYELIWSAGDGRMHVEQSEDSEELIQRRRALENWLKLDGWVRHGRITPPRQNTKPRSEWKPRKSDVH*
Ga0066671_104007272	3300005184	Soil	MIWFFERPGERLRCEIRRSVMGTDYELVWTAGDGRTHVEQSQNPEELMSRRRALEHWLKLDGWVRPGRITPPRRTRPQSEWQQRKSEPTEIH*
Ga0070670_1003643832	3300005331	Switchgrass Rhizosphere	MIWFLERPGERLQCEIRRSSAGPGYELIWSSSDGRVHVEASDDPEELLRRRRALENWLRRDGWVRPGRVTPLHVVRPLPRGPAERRETT*
Ga0066388_1008989534	3300005332	Tropical Forest Soil	MIWFFERPGERLQCEIRRAAGDQGYELVWTSSDGRSHVEISRDPAELIHRRRALEVWLKLDGWVRPGQVTPPRRPRPRSEWQPRKTELN*
Ga0070694_1017257921	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIWFFERPGERLRCEIRRSVMGTDYELVWTAGDGRTLVEQSPNPEELMFRRRALEHWLKLDGWVQPGLRVTPPRRTRPQSEWQQRKSEPPIH*
Ga0066689_103316602	3300005447	Soil	MIWFFERPGERLQCEIRRSASGHGYELIWSAGDGRMHMEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRKNTKPRSEWKQRKSDVH*
Ga0066681_102972991	3300005451	Soil	MIWFFERPGERLQCEIRRSAAGPGYELIWSAGDGRMHVEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRQNTKPRSEWKQRKSDMH*
Ga0070678_1022736902	3300005456	Miscanthus Rhizosphere	NSWVGMIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHTELSDDAAELIRRRHALEHWLRLDGWIRPGRITPTHPFRTERTRKTDVPMR*
Ga0070698_1005756862	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIWFFERPGERLQCEIRQAASGSGYELVWTSSDGRIHVELSDDASELMRRRRALEHWLKLDGWIRPGRDTPSRPFRTERTRKTDAPLH*
Ga0070695_1015385472	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MIWFFERPGERLRCEIRRAVIGNGYELVWTANDGRVHVEQSQNPEELMSRRRALEHWLKLDGWVRPGRITPPRKTRPQSEWQTRKSELH*
Ga0066700_103930312	3300005559	Soil	MIWFFERPGERLQCEIRRSAAGHGYELIWSAGDGRMHVEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPHKNTKPRSEWKQRKSDVH*
Ga0066699_100324172	3300005561	Soil	MIWFFERPGERLQCEIRRSAAGHGYELIWSAGDGRMHVEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRQNTKPRSEWKQRKSDMH*
Ga0066705_106139202	3300005569	Soil	MIWFFERPGERLQCEIRRSAAGHGYELIWSAGDGRMHVEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRQNTKPRSEWK
Ga0068870_111976481	3300005840	Miscanthus Rhizosphere	MIWFFERPGERLRCEIRRSVMGTDYELVWTAGDGRTLVEQSPNPEELMFRRRALEHWLKLDGWVQPGLRVTPPRRTRPQSEWQQRKSEPPIHY*
Ga0066656_107042162	3300006034	Soil	MIWFFERPGERLQCEIRRSAAGHGYELIWSAGDGRMHVEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRK
Ga0075368_103915782	3300006042	Populus Endosphere	MIWFFERPGERLQCEIRQAASGQGYELVWTASDGRIHVELSDDPTELIRRRRALEQWLKLDGWIRPGRVTPNRPLSYERTRKTDTRAS*
Ga0066652_1000964803	3300006046	Soil	MIWFFERPGERLQCEIRQAASGAGYELVWTSNNGRVHIEMSDDAAELIRRRRALEHWLRLDGWIRPGRITPTHPFRTERTRKTDVPMQ*
Ga0075366_100918983	3300006195	Populus Endosphere	MIWFFERPGERLQCEIRQAASGPGYELVWTASDGRIHIELSDDPTELIRRRRALEQWLKLDGWIRPGRVTPNRPLGHERTRKTDTRAY*
Ga0079220_109277762	3300006806	Agricultural Soil	MIWFFERPGERLQCEIRQAASGEKYELVWTSSDGRAHIETSDDPSELLRRRRALEHWLRLDGWVRPGRLTPPRPPRHLRTRKTDPPQS*
Ga0075428_1000000854	3300006844	Populus Rhizosphere	MIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHVELSDDAAELIRRRRALEHWLRLDGWVRPGRVTPIHPPRTERTRKTDVPLH*
Ga0075425_1001012576	3300006854	Populus Rhizosphere	MIWFFERPGERLRCEIRRTVVGSAYELVWTAGDGRTHVEQSQNPEELMLRRRALEHWLKLDGWVRPGRVTPPRRTRPQSEWQQRKSEPFH*
Ga0079217_103611042	3300006876	Agricultural Soil	MIWFFERPGERLQCEIRQAASGPGYELVWTSSDGRIHVESSDDASELMRRRQALEHWLTLDGWIRPGRDAPSRQLRTQRTRKTDARPH*
Ga0079217_109849352	3300006876	Agricultural Soil	MIWFFERPGERLQCEIRQAASGPGYELVWTSNDGRIHIELSNDASELIRRRRALEHWLKLDGWIRPGRVTPVRPGRIQRTRKTDALMH*
Ga0079215_102552252	3300006894	Agricultural Soil	MIWFFQRPGERLQCEIRQAASGPGYELVWTSSDGRMHVELSDDASELIRRRRALEHWLKLDGWIRPGRVTPVRPNRNQRTRKTDVQLH*
Ga0079215_106783402	3300006894	Agricultural Soil	MIWFFERPGERLQCEIRQAASGPGFELVWTSSDGRIHVELSNDATELIRRRRALEHWLKLDGWIRPGRVTPVRPFRNERTRKTDLLLH*
Ga0075424_1002860331	3300006904	Populus Rhizosphere	PGERLRCEIRRTVVGSAYELVWTAGDGRTHVEQSQNPEELMLRRRALEHWLKLDGWVRPGRVTPPRRTRPQSEWQQRKSEPLH*
Ga0079216_100613721	3300006918	Agricultural Soil	VERMIWFFERPGERLQCEIRQAASGLGFELVWTSSDGRIHVELSDDASELIRRRRALEHWLKLDGWIRPGRVTPVRPLRTLRTRKTDARPN*
Ga0079216_105705952	3300006918	Agricultural Soil	IWFFKRPGERLQCEIRQVASGTGYELVWTSSDGRIHVELSDDASELMRRRRALEHWLKLDGWIRPGHDTPSRPFRTERTRKTDARLL*
Ga0079218_104005921	3300007004	Agricultural Soil	LQCEIRQAASGPGYELVWTSSDGRIHVELSDDASELIRRRPALEHWLKLDGWIRPGRVTPIRPPRHQRTRKTDTQLH*
Ga0079218_117196072	3300007004	Agricultural Soil	MIWFFERPGERLQCEIRQSASGPGFELVWTTSDGRVHVELSDDASELIRRRRALEQWLVLDGWVRPGRVTPDHPFRDERKRTPDVRMH*
Ga0079218_121740521	3300007004	Agricultural Soil	MIWFFERPGERLQCEIRQAASGLGFELVWTSSDGRIHVELSDDASELIRRRRALEHWLKLDGWIRPGRVTPVRPLRTLRTRKTDARTN*
Ga0066710_1005087284	3300009012	Grasslands Soil	MIWFFERPGERLQCEIRRSASGHGYELIWSAGDGRMHMEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRQNTKPRSEWKPRKSELH
Ga0105106_101909532	3300009078	Freshwater Sediment	MIWFFERPGERLQCEIRQTASGSGYELVWTASDGRIQIETSHDPSELIRRRRALEHWLRLDGWVRPGRITPTRPPRHLRTRKTDLRPQ*
Ga0105107_100539614	3300009087	Freshwater Sediment	MIWFFERPGERLQCEIRQTASGSGYELVWTTSDGRIHIETSHDSSELIRRRRALEHWLRLDGWVRPGRITPTRPPRHLCTRKTDLRPQ*
Ga0105107_104024602	3300009087	Freshwater Sediment	MIWFFERPGERLQCEIRQAASGPGYELVWTSNDGRIHVELSNDASELIRRRRALEHWLKLDGWIRPGRVTPIRPSRQQRTRKTDAWMH*
Ga0099830_112428661	3300009088	Vadose Zone Soil	MIWFFERPGERLQCEIRPSALGRGYELVWSAGDGRTHVEHSGDPEELTERRRALENWLKRDGWVRHGRITPPRNSKPRQDWKARKAEIH*
Ga0105249_111854981	3300009553	Switchgrass Rhizosphere	MIWFFERPGERLRCEIRRSLQAGYELVWTAGDGRTHIEHSEDPEELLRRRRALENWLKLDGWIRPGRVTPPRNTRPRSEWQPRQTEIH*
Ga0105347_10089275	3300009609	Soil	MIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHIELSDDASELIRRRRALEHWLRLDGWIRPGRVTPTHPPRTDRTRKTDVPMH*
Ga0105340_10092552	3300009610	Soil	MIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHVELSDDASELIRRRRALEHWLRLDGWIRPGRVTPTHPPRTERTRKTDVPMH*
Ga0126313_115877462	3300009840	Serpentine Soil	MIWFFERPGERMQCEIRQASSGIGYELVWTSNDGRVHVELSDDPAELLRRRRILEHWLKLDGWVRPGRMTPVPPCRSARTRKTDVRLH*
Ga0105030_1265401	3300009987	Switchgrass Rhizosphere	CEIRQAASGKGYELVWTSNDGRAHIETSDDPSELLRRRRALEHWLRLDGWVRPGRITPPRPERHLRTRKTDPPQS*
Ga0126304_101245382	3300010037	Serpentine Soil	MIWFFERPGERMQCEIRQASSGIGYELVWTSNDGRVHVELSDDPAELLRRRRVLEHWLRLDGWVRPGRMTPVPPFRSARTRKTDVRLH*
Ga0126311_112392032	3300010045	Serpentine Soil	LLLLCEIRPAASGPGFALVRTANDGRIHVELSNDASELIRRRRALEHWLKLDGWIRPGRITPVRPFRAERTRKTDPLLH*
Ga0099796_104913752	3300010159	Vadose Zone Soil	MIWFFERPGERLRCEIRRSVMGTEYELVWTAGDGRTHVEQSQNPEELMSRRRALEHWLKLDGWVRPGRVTPPRKTRPQSEWQQRKSEPPTRSEIH*
Ga0134127_101878141	3300010399	Terrestrial Soil	MIWFFERPGERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRTTPTRPPRHLRTRKTDKRPH*
Ga0137443_10090074	3300011433	Soil	MIWFLERPGERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRITPTRPPRHLRTRKTDKRAH*
Ga0137432_10051464	3300011439	Soil	MIWFFERPGEHLQCEIRHAESGNGFELVWTASDGRIHVERSHDPSELLRRRRALEHWLKLDGWIRPGRVTPVRVPPRTLRTRKTDAFTH*
Ga0136631_100456422	3300012043	Polar Desert Sand	MIWFFERPGERLQCEIRQSASGTGYELVWTSSDGRIHVEASEDSSELLRRRRALEHWLKLDGWIRPGRITPVRPDRNVRTRKTDVRLH*
Ga0136632_105258221	3300012093	Polar Desert Sand	MIWFFERPGERLQCEIRQAASGSGYELVWTSTDGRIHVELSDDPSELMRRRRALEHWLKLDGWIRPDRVTPIRPLRNQRTRKTDLRPH*
Ga0137376_111369481	3300012208	Vadose Zone Soil	MIWFFERPGEHLRCEIRRSVMGTEYELVWTAGDGRTHVEQSQNPEELMSRRRALEHWLKLDGWVRPGRVTPPRKTRPQSEWRQRKSEPPTRSEIH*
Ga0136635_100953432	3300012530	Polar Desert Sand	MIWFFERPGERLQCEIRQSASGTGYELVWTSSDGRILVEASEDSSELLRRRRALEHWLKLDGWIRPGRITPVRPDRNVRTRKTDVRLH*
Ga0137407_102006892	3300012930	Vadose Zone Soil	YRYAIQMIWFFQRIGERLECELRPSPHGSGYELAWSAGDGRTHVEHSADPEELLQRLRALENWLKLDGWIRHGGITPVPSFTRRSQWTPRKFEVNSRD*
Ga0180093_11398841	3300015258	Soil	MIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHVELSDDAAELIRRRRALEHWLRLDGWTRPGRVTPTHPL
Ga0137403_115471232	3300015264	Vadose Zone Soil	MIWFFERPGERLRCEIRRAGLGDGYELVWTSHDGQSHVEVSENPDELMRRRRALELWLKLDGWVRPGRVTPPRKTRPRSEWHTRKTEVH*
Ga0163144_101131585	3300015360	Freshwater Microbial Mat	MIWFFERPGERLQCEIRQASSGPGYELVWTSNDGRIHVELSNDPSELLRRRRALEHWLRLDGWVRPGRVTPARPSRNARTRKSDLRLH*
Ga0180121_100835802	3300017695	Polar Desert Sand	MIWFFERPGERLQCEIRQSASGTGYELVWTSSDGRILVEASEDSSELLRRRRALEHWLKLDGWIRPGRITPVRPDRNVRTRKTDVRLH
Ga0136617_100819015	3300017789	Polar Desert Sand	MIWFFERPGERLQCEIRQSASGTAYELVWTSSDGRIHVEASEDSSELLRRRRALEHWLKLDGWIRPGRITPVRPDRNVRTRKTDVRLH
Ga0163161_108327603	3300017792	Switchgrass Rhizosphere	MIWFFERPGERLRCEIRRAVIGNGYELVWTANDGRVHVEQSQNPEELMSRRRALEHWLKLDGWVRPGRITPPRKTR
Ga0190266_105580162	3300017965	Soil	MIWFFERPGERLQCEIRQAASGPGFELVWTSSDGRVHVELSDDATELIRRRRALEQWLKLDGWVRPGGRVTPDHPFRTERTRKTDVQMH
Ga0184605_102590812	3300018027	Groundwater Sediment	MIWFFERPGERLRCEIRRSVMGTEYELVWTAGDGRTHVEHSQNPEELMSRRRALEHWLKLDGWVRPGRVTPPRKTRPQSEWQHRKSEPPSPSDMY
Ga0184635_100008704	3300018072	Groundwater Sediment	MIWFFERLGERLQCEIRQAASGAGYELVWTSNDGRIHVELSDDASELIRRRRALEHWLRLDGWVRPGRITPTHPLRTERTRKTDVPMH
Ga0190265_118516352	3300018422	Soil	MIWFFKRPGERLQCEIRQAASGSGYELVWTSSDGRIHVELSDDASELMRRRRALEHWLKLDGWIRPGDTPSRPFRTERTRKTDARLH
Ga0190272_101488692	3300018429	Soil	MIWFFKRPGERLQCEIRQAASDSGYELVWTSSDGRIHVELSDDASELMRRRRALEHWLKLDGWIRPGDTPSRPFRTERTRKTDARLH
Ga0190272_108494912	3300018429	Soil	MIWFFERPGERLQCEIRQAASGHGFELVWTSSDGRIHVELSNDASELIRRRRALEHWLTLDGWIRPGRVTPIRPFRQQYSRTTDPLVH
Ga0190272_113410032	3300018429	Soil	MIWFFERPGERLQCEIRQAASGPGYELVWTSNDGRIHVELSNDASELIRRRRALEHWLKLDGWIRPGCVTPMRPSRNQRTRKTDARMH
Ga0190275_100410214	3300018432	Soil	VIWFFERPGERLQCEIRQTASGPGFELVWTSSDGRIHVELSNDASELMRRRRALEDWLKLDGWIRPGRVTPVRPFRNERTRKTDLRLH
Ga0190268_120926962	3300018466	Soil	MIWFFERPGERLQCEIRQSASGSGFELVWTSSDGRIHVEVSNDASELIRRRRALEHWLKLDGWIRPGRVTPVRPPRPQRTRKTDAQLH
Ga0190270_103747132	3300018469	Soil	MIWFFERPGERLQCEIRQSASGSGFELVWTSSDGRIHVEVSNDASELIRRRRALEHWLKLDGWIRPGRVTPVRPPRTQRTRKTDAHFH
Ga0190270_104980332	3300018469	Soil	MIWFFERPGERLQCEIRQAASGSGYELVWTSSDGRIHVELSDDASELMRRRRALEHWLKLDGWIRPVDTPSRPFRTERTRKTDARLH
Ga0190270_114380591	3300018469	Soil	MIWFFERPGERLQCEIRLASSGPGYELVWTTSDGRMHVELSPDPAELLRRRRALEHWLKLDGWVRPGRVTPTPPPRSQRTRKTDVQLH
Ga0190274_121181421	3300018476	Soil	MIWFLERPGERLQCEIRRASAGTGYELIWTSSDGRTHVEMSDDAEELLSRRRALENWLRRDGWVRPGRITPQRIF
Ga0190271_102502332	3300018481	Soil	MIWFFERPGERLQCEIRLASSGPGYELVWTTSDGRMHVELSPDPAELLRRRRALEHWLKLDGWVRPGRVTPTPPTRSERTRKTDVQLH
Ga0190264_110292632	3300019377	Soil	MIWFFERPGERLQCEIRHAASGPGFELVWTSSDGRIHVELSNDASELMRRRRALEHWLKLDGWIRPGRITPVGPFRAERTRKTDALLH
Ga0190264_123185782	3300019377	Soil	MIWFFERPGERLQCEIRQVASGSGYELVWTSSDGRIHVELSDDASELMRRRRALEHWLKLDGWVRPSRDTPSHPFRTERTRKTDARLH
Ga0193741_10347814	3300019884	Soil	MIWFFERPGERLQCEIRQTASGTGFELVWTSNDGRVHMEQSDDPSELLRRRRALEHWLKLDGWIRPGGRVTPTRPPRLLRTRKTDVGLR
Ga0193741_10486624	3300019884	Soil	MIGFFERPGERLQCEIRQAASDSGYELVWTSSDGRIHVELSDDASELMRRRRALEHWLKLDGWVRPGRDTPSHPFRT
Ga0163151_102629532	3300020057	Freshwater Microbial Mat	MIWFFERPGERLQCEIRQASSGPGYELVWTSNDGRIHVELSNDPSELLRRRRALEHWLRLDGWVRPGRVTPARPSRNARTRKSDLRLH
Ga0210382_104335742	3300021080	Groundwater Sediment	MIWFFERPGERLQCEIRRSLNAGYELVWTSSDGQVHVEQSNDPEELMLRRRALENWLRLDGWVRPGRITPPRNTRPRSEWRVRKTEVREEIH
Ga0247793_10122181	3300023066	Soil	MIWFFERPGERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRTTPTRPPRHL
Ga0247799_10867012	3300023072	Soil	MIWFFERPGERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRTTPTRPP
Ga0207646_103200372	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIWFFERPGERLRCEIRRSVMGTDYELVWTAGDGRTLVEQSPNPEELMFRRRALEHWLKLDGWVQPGLRVTPPRRTRPQSEWQQRKSEPPIH
Ga0207650_109414152	3300025925	Switchgrass Rhizosphere	MIWFLERPGERLQCEIRRSAAGPGYELIWSSSDGRVHVEASDDPEELLRRRRALENWLRRDGWVRPGRVTPLHVVRPLPRGPAERRETT
Ga0207701_101475093	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MIWFFERLGERLQCEIRQAASGAGYELVWTSNDGRVHIELSDDAAELIKRRHALEHWLRLDGWIRPGRITPTHPFRTERTRKTDVPMR
Ga0207701_114048602	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MIWFFERPGERLQCEIRQAASGAGYELVWTANNGRVHIEMSDDAAELIRRRRALEHWLRLDGWIRPGRVTPTHPPRTERTRKTDSPMH
Ga0207708_119975081	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MIWFFERPGERLRCEIRRSVMGTDYELVWTAGDGRTLVEQSPNPEELMFRRRALEHLLKLDGWVQPGLRVTPPRRTRPQSEWQQRKSEPPIH
Ga0207675_1012285623	3300026118	Switchgrass Rhizosphere	MIWFFERPGERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRTTPTRPPRH
Ga0207675_1012630452	3300026118	Switchgrass Rhizosphere	MIWFFERPGERLRCEIRRAVIGNGYELVWTANDGRVHVEQSQNPEELMSRRRALEHWLKLDGWVRPGRITPPRKTRPQSEWQTRKSELH
Ga0209153_12110542	3300026312	Soil	MIWFFERPGERLQCEIRRSAAGHGYELIWSAGDGRMHVEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRQNTKPRSEWKQRKSDMH
Ga0209152_103267971	3300026325	Soil	SRRTLRYQGGMIWFFERPGERLQCEIRRSAAGHGYELIWSAGDGRMHVEQSEDPEELIQRRRALENWLKLDGWVRHGRITPPRQNTKPRSEWKQRKSDMH
Ga0208185_11328852	3300027533	Soil	MIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHVELSDDASELIRRRRALEHWLRLDGWIRPGRVTPTHPPRTERTRKTDVPMH
Ga0209387_10302712	3300027639	Agricultural Soil	MIWFFERPGERLQCEIRQAASGPGYELVWTSSDGRIHVELSDDASELIRRRRALEHWLKLDGWIRPGRVTPIRPPRHQRTRKTDTQLH
Ga0209387_11236012	3300027639	Agricultural Soil	MIWFFERPGERLQCEIRQAASGPGYELVWTSNDGRIHIELSNDASELIRRRRALEHWLKLDGWIRPGRVTPVRPGRIQRTRKTDALMH
Ga0209387_12506372	3300027639	Agricultural Soil	MIWFFERPGERLQCEIRQAASGPGFELVWTSSDGRIHVELSNDATELIRRRRALEHWLKLDGWIRPGRVTPVRPFRNERTRKTDLLLH
Ga0209485_11102051	3300027691	Agricultural Soil	MIWFFERPGERLQCEIRQAASGLGFELVWTSSDGRIHVELSDDASELIRRRRALEHWLKLDGWIRPGRVTPVRPL
Ga0209706_100329483	3300027818	Freshwater Sediment	MIWFFERLGERLQCEIRQTASGSGYELVWTTSDGRIHIETSHDSSELIRRRRALEHWLRLDGWVRPGRITPTRPPRHLRTRKTDLRPQ
Ga0209706_104294251	3300027818	Freshwater Sediment	MIWFFERPGERLQCEIRQAASGPGYELVWTSNDGRIHVELSNDASELIRRRRALEHWLKLDGWIRPGRVTPIRPSRQQRTRKTDAWMH
Ga0209486_106803112	3300027886	Agricultural Soil	MIWFFERPGERLQCEIRQSASGPGFELVWTTSDGRVHVELSDDASELIRRRRALEQWLVLDGWVRPGRVTPDHPFRDERKRTPDVRMH
Ga0207428_1000019555	3300027907	Populus Rhizosphere	MIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHVELSDDAAELIRRRRALEHWLRLDGWVRPGRVTPIHPPRTERTRKTDVPLH
Ga0209705_103103822	3300027979	Freshwater Sediment	MIWFFERPGERLQCEIRQTASGSGYELVWTASDGRIQIETSHDPSELIRRRRALEHWLRLDGWVRPGRITPTRPPRHLRTRKTDLRPQ
Ga0307284_100691572	3300028799	Soil	MIWFFERPGERLRCEIRRSVMGTEYELVWTAGDGRTHVEQSQNPEELMSRRRALELWLKLDGWVRPGRVTPPRKTRPQSEWRHRKSEPPSPSEIH
Ga0307310_105900792	3300028824	Soil	LRTIEFHRRPRYLGRMIWFFERPGERLRCEIRRATIGSGYELVWTANDGRTHVEQSQNPEDLMTRRRALEHWLKLDGWVRPGRVTPPRKTRPQSEWQRRKSEQPPRSEIH
Ga0299906_100465453	3300030606	Soil	MIWFFERPGERLQCEIRQAASGPGFEIVWTSSDGRIHVELSNDASELIRRRRALEHWLKLDGWIRPGRVTPVRPSRNQRTRRTDIRLH
Ga0299913_117403212	3300031229	Soil	MIWFFERPGERLQCEIRQSASGAGFELVWTSSDGRIHVELSDDPSELLRRRRALEHWLKLDGWIRPGRVTPVRPPRDARTRKTDVRLH
Ga0307505_103407662	3300031455	Soil	ALQDGGVHTDMQGAMIWFFERPGERLQCEIRQAASGHGYELVWTSSDGRIHVELSNDASELIRRRRALEHWLELDGWVRPGGVTPTHPIRSQRTRKTDARLH
Ga0310886_105755931	3300031562	Soil	ERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRTTPTRPPRHLRTRKTDKRLH
Ga0307413_109247912	3300031824	Rhizosphere	MIWFFERPGERLQCEIRQASSGAGYELVWTSSDGRVHVELSNDATELIRRRRALEHWLKLDGWICPGRITPTRPFAGRRLH
Ga0307413_111238842	3300031824	Rhizosphere	ERLQCEIRQSASGPGFELVWTTSDGRVHVELSDDASELIRRRRALEQWLVLDGWVRPGRVTPDHPFRDERKRTPDVRMH
Ga0310893_101261622	3300031892	Soil	GWRMIWFFERPGERLQCEIRQAASGQGYELVWTSSDGRVHVELANDASELMRRRRALEQWLKLDGWVRPDRTTPTRPPRHLRTRKTDKRLH
Ga0310897_101460062	3300032003	Soil	MIWFLERPGERLQCEIRRSSVGTGYELVWTSNDGRTHVEISDDAEELLSRRRALENWLRRDGWVRPGRATPHRIFRPRTKAVGGVPASPEPPKPI
Ga0316616_1020042171	3300033521	Soil	MIWFFERRGERLRCEIRRNGAGGDYELVWTASDGRTHVVRSDDPADLVRRRRSLVVWLGVDGWVRIGRPTPPRPHRPSA
Ga0370490_0008572_2626_2892	3300034128	Untreated Peat Soil	MIWFFERPGERLRCEIRQAASGAGYELVWTSSDGRIHVELSNDPSELIRRRRALEHWLKLDGWVQPGRVTPTHPIRSEGTRKTDARLD
Ga0364927_0008322_931_1197	3300034148	Sediment	MIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHIELSDDASELIRRRRALEHWLRLDGWIRPGRVTPTHPPRTERTRKTDVPMH
Ga0364935_0031811_232_498	3300034151	Sediment	MIWFFERPGERLQCEIRQAASGAGYELVWTSNDGRVHIELSDDASELIRRRRALEHWLRLDGWIRPGRVTPTHPPRTDRTRKTDVPMH
Ga0334948_050526_97_363	3300034760	Sub-Biocrust Soil	MIWFFERPGERLQCEIRQAASGPGFELVWTSNDGRIHVELSNDASELIRRRRALEHWLKLDGWIRPGRITPVHPFRAQRTRKTDALLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060113

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences