Metagenome / Metatranscriptome Family F060076

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060076
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	68 residues
Representative Sequence	MKKIGAIMAIVFFAACNNAGNSTNKTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGIKK
Number of Associated Samples	114
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.28 %
% of genes near scaffold ends (potentially truncated)	23.31 %
% of genes from short scaffolds (< 2000 bps)	81.20 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.722 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.271 % of family members)
Environment Ontology (ENVO)	Unclassified (51.128 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.165 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.56% β-sheet: 0.00% Coil/Unstructured: 81.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00082	Peptidase_S8	25.56
PF01625	PMSR	24.06
PF01641	SelR	6.77
PF05922	Inhibitor_I9	3.01
PF02927	CelD_N	1.50
PF00795	CN_hydrolase	0.75
PF09674	DUF2400	0.75
PF00459	Inositol_P	0.75
PF13361	UvrD_C	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	24.06
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	6.77
COG1404	Serine protease, subtilisin family	Posttranslational modification, protein turnover, chaperones [O]	3.01

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.72 %
Unclassified	root	N/A	11.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.72 %
Unclassified	root	N/A	11.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.72 %
Unclassified	root	N/A	11.28 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	75.94 %
Unclassified	root	N/A	11.28 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	75.94 %
Unclassified	root	N/A	11.28 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	75.94 %
Unclassified	root	N/A	11.28 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	27.82 %
Unclassified	root	N/A	11.28 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	6.02 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.50 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	27.82 %
Unclassified	root	N/A	11.28 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	6.02 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.50 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	27.82 %
Unclassified	root	N/A	11.28 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	6.02 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	27.82 %
Unclassified	root	N/A	11.28 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	0.75 %
Terrimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas	0.75 %
Chryseosolibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Chryseosolibacter	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	27.82 %
Unclassified	root	N/A	11.28 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	0.75 %
Terrimonas ferruginea	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	0.75 %
Chryseosolibacter histidini	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Chryseosolibacter → Chryseosolibacter histidini	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_131894	Not Available	559	Open in IMG/M
2228664022\|INPgaii200_c0845200	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	963	Open in IMG/M
3300000156\|NODE_c0540589	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1202	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101371198	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	579	Open in IMG/M
3300000559\|F14TC_104171842	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1328	Open in IMG/M
3300000789\|JGI1027J11758_12738038	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300000955\|JGI1027J12803_100430334	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	638	Open in IMG/M
3300002100\|JGI24809J26612_1000493	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	13377	Open in IMG/M
3300003579\|Ga0007429J51699_1077994	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	799	Open in IMG/M
3300003735\|Ga0006780_1037881	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	706	Open in IMG/M
3300004156\|Ga0062589_100768432	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	867	Open in IMG/M
3300004157\|Ga0062590_101590285	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300004463\|Ga0063356_100001675	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	17454	Open in IMG/M
3300004480\|Ga0062592_100418240	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1074	Open in IMG/M
3300004480\|Ga0062592_101812672	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	597	Open in IMG/M
3300005175\|Ga0066673_10159938	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1260	Open in IMG/M
3300005290\|Ga0065712_10153690	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1350	Open in IMG/M
3300005328\|Ga0070676_10008335	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	5586	Open in IMG/M
3300005329\|Ga0070683_101226454	Not Available	721	Open in IMG/M
3300005332\|Ga0066388_108803138	Not Available	501	Open in IMG/M
3300005338\|Ga0068868_100122720	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2120	Open in IMG/M
3300005339\|Ga0070660_100230156	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300005340\|Ga0070689_100523466	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300005340\|Ga0070689_101657247	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	581	Open in IMG/M
3300005344\|Ga0070661_100006946	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	7814	Open in IMG/M
3300005344\|Ga0070661_100244386	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1383	Open in IMG/M
3300005344\|Ga0070661_100271402	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1314	Open in IMG/M
3300005353\|Ga0070669_100289792	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1314	Open in IMG/M
3300005354\|Ga0070675_100428087	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300005356\|Ga0070674_101636488	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	581	Open in IMG/M
3300005365\|Ga0070688_101484721	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	551	Open in IMG/M
3300005366\|Ga0070659_100389887	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1174	Open in IMG/M
3300005367\|Ga0070667_100037810	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4046	Open in IMG/M
3300005367\|Ga0070667_101964379	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	551	Open in IMG/M
3300005438\|Ga0070701_10383376	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005439\|Ga0070711_101876335	Not Available	526	Open in IMG/M
3300005457\|Ga0070662_100456037	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1062	Open in IMG/M
3300005459\|Ga0068867_101431720	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	642	Open in IMG/M
3300005526\|Ga0073909_10265303	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	768	Open in IMG/M
3300005535\|Ga0070684_100411474	Not Available	1248	Open in IMG/M
3300005543\|Ga0070672_101227473	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	668	Open in IMG/M
3300005563\|Ga0068855_100159646	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2560	Open in IMG/M
3300005564\|Ga0070664_101494970	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	639	Open in IMG/M
3300005578\|Ga0068854_101003248	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	739	Open in IMG/M
3300005598\|Ga0066706_10311070	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300005614\|Ga0068856_101402027	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	713	Open in IMG/M
3300005618\|Ga0068864_102466009	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	526	Open in IMG/M
3300005840\|Ga0068870_10213253	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1177	Open in IMG/M
3300005841\|Ga0068863_100219198	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1833	Open in IMG/M
3300005844\|Ga0068862_100080731	All Organisms → cellular organisms → Bacteria	2821	Open in IMG/M
3300006031\|Ga0066651_10817102	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	506	Open in IMG/M
3300006046\|Ga0066652_100105184	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2285	Open in IMG/M
3300006237\|Ga0097621_100363332	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1290	Open in IMG/M
3300006237\|Ga0097621_100650727	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	967	Open in IMG/M
3300006755\|Ga0079222_12224378	Not Available	546	Open in IMG/M
3300006871\|Ga0075434_102347430	Not Available	536	Open in IMG/M
3300006903\|Ga0075426_11130736	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300009174\|Ga0105241_10304339	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1369	Open in IMG/M
3300009176\|Ga0105242_12190369	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	598	Open in IMG/M
3300010048\|Ga0126373_10344690	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1500	Open in IMG/M
3300010358\|Ga0126370_12179243	Not Available	546	Open in IMG/M
3300010397\|Ga0134124_10806600	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	938	Open in IMG/M
3300010398\|Ga0126383_12359774	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	617	Open in IMG/M
3300010400\|Ga0134122_10094612	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2356	Open in IMG/M
3300010400\|Ga0134122_10877323	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	865	Open in IMG/M
3300011332\|Ga0126317_10981348	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Chryseosolibacter → Chryseosolibacter histidini	872	Open in IMG/M
3300012201\|Ga0137365_10010525	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	7319	Open in IMG/M
3300012207\|Ga0137381_10827050	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300012208\|Ga0137376_11569691	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012212\|Ga0150985_104520450	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2271	Open in IMG/M
3300012212\|Ga0150985_107336302	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	955	Open in IMG/M
3300012212\|Ga0150985_112335161	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1022	Open in IMG/M
3300012212\|Ga0150985_113331521	Not Available	782	Open in IMG/M
3300012353\|Ga0137367_10780426	Not Available	664	Open in IMG/M
3300012355\|Ga0137369_11035852	Not Available	541	Open in IMG/M
3300012469\|Ga0150984_106405133	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1824	Open in IMG/M
3300012469\|Ga0150984_123488404	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	988	Open in IMG/M
3300012485\|Ga0157325_1018892	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012951\|Ga0164300_11123374	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	515	Open in IMG/M
3300012957\|Ga0164303_10755823	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	663	Open in IMG/M
3300012984\|Ga0164309_11739620	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	535	Open in IMG/M
3300012987\|Ga0164307_10398182	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1014	Open in IMG/M
3300012989\|Ga0164305_10468854	Not Available	983	Open in IMG/M
3300012989\|Ga0164305_10632971	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	864	Open in IMG/M
3300012989\|Ga0164305_11079857	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	688	Open in IMG/M
3300013100\|Ga0157373_10345082	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1061	Open in IMG/M
3300013296\|Ga0157374_11872879	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	625	Open in IMG/M
3300013297\|Ga0157378_12150909	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	609	Open in IMG/M
3300014968\|Ga0157379_10023021	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	5522	Open in IMG/M
3300014968\|Ga0157379_11475495	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	661	Open in IMG/M
3300014969\|Ga0157376_10804506	Not Available	953	Open in IMG/M
3300015085\|Ga0167632_1037396	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	628	Open in IMG/M
3300015371\|Ga0132258_10014423	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	16806	Open in IMG/M
3300015371\|Ga0132258_10127377	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6064	Open in IMG/M
3300015371\|Ga0132258_10758010	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2445	Open in IMG/M
3300015372\|Ga0132256_100015563	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6665	Open in IMG/M
3300015373\|Ga0132257_100116725	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3094	Open in IMG/M
3300015373\|Ga0132257_104246201	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	521	Open in IMG/M
3300015374\|Ga0132255_100119089	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3625	Open in IMG/M
3300015374\|Ga0132255_104828034	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	571	Open in IMG/M
3300017654\|Ga0134069_1362361	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	522	Open in IMG/M
3300017792\|Ga0163161_11751455	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	551	Open in IMG/M
3300017927\|Ga0187824_10264802	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300018482\|Ga0066669_10746457	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	864	Open in IMG/M
3300019361\|Ga0173482_10591459	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300020021\|Ga0193726_1001278	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	20505	Open in IMG/M
3300020077\|Ga0206351_10266030	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	517	Open in IMG/M
3300020080\|Ga0206350_10874451	Not Available	582	Open in IMG/M
3300024055\|Ga0247794_10033376	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1344	Open in IMG/M
3300025901\|Ga0207688_10172815	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300025904\|Ga0207647_10018454	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4716	Open in IMG/M
3300025904\|Ga0207647_10604348	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	605	Open in IMG/M
3300025913\|Ga0207695_10555167	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1030	Open in IMG/M
3300025917\|Ga0207660_10405890	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1098	Open in IMG/M
3300025926\|Ga0207659_11707621	Not Available	536	Open in IMG/M
3300025931\|Ga0207644_10096131	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2217	Open in IMG/M
3300025933\|Ga0207706_10630550	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	919	Open in IMG/M
3300025934\|Ga0207686_11648230	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	530	Open in IMG/M
3300025938\|Ga0207704_10718625	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300025940\|Ga0207691_11010981	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	694	Open in IMG/M
3300025945\|Ga0207679_10163710	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1824	Open in IMG/M
3300025949\|Ga0207667_10454642	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1301	Open in IMG/M
3300025986\|Ga0207658_10016260	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5117	Open in IMG/M
3300026078\|Ga0207702_10730391	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	977	Open in IMG/M
3300026088\|Ga0207641_10257336	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1633	Open in IMG/M
3300026089\|Ga0207648_10088556	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2703	Open in IMG/M
3300026095\|Ga0207676_11321150	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	716	Open in IMG/M
3300028380\|Ga0268265_11502389	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	677	Open in IMG/M
3300031231\|Ga0170824_100011170	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	871	Open in IMG/M
3300031716\|Ga0310813_10566974	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1000	Open in IMG/M
3300031740\|Ga0307468_100383264	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1065	Open in IMG/M
3300032205\|Ga0307472_100835109	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300033475\|Ga0310811_10134830	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	3136	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.89%
Environmental	Environmental	44.36%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.89%
Terrestrial	Environmental → Terrestrial	42.86%
Aquatic	Environmental → Aquatic	1.50%
Solid Waste	Engineered → Solid Waste	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	26.32%
Freshwater	Environmental → Aquatic → Freshwater	1.50%
Roots	Host-Associated → Plants → Roots	1.50%
Grass	Engineered → Solid Waste → Grass	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.02%
Loam	Environmental → Terrestrial → Soil → Loam	8.27%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.01%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.26%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.26%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003735	Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012485	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02130850	2199352025	Soil	MNKLGMIMLIAFFAACNNAGNGTNKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTSIKK
INPgaii200_08452003	2228664022	Soil	MLIAIFAACNNSATETNKTDSSAVKDNTNMYDTGAGSSITDTAQHRDTSLIPNKMQDTVIKK
NODE_05405891	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MKKIGIVMLIAFFAACNNAGNSTNKTDSSATKDNTNMYDTGVGSSATDTAQRRDTSLIPNKMQDTGMKK
INPhiseqgaiiFebDRAFT_1013711982	3300000364	Soil	MKXLGMIMLXAXFXACNNSXTXTNKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK*
F14TC_1041718422	3300000559	Soil	MKKIGIIALVTFFAACNNAGKSTNTTDSSVTKDNTNMYDTGVGSSMTDTAQHRDTSAIPNKMQDTGTKK*
JGI1027J11758_127380383	3300000789	Soil	MLIAIFAACNNSATETNKTDSSAVKDNTNMYDTGAGSSITDTAQHRDTSLIPNKMQDTXXKK*
JGI1027J12803_1004303341	3300000955	Soil	MLIAIFAACNNSATETNKTDSSAVKDNTNMYDTGAGSSITDTAQHRDTSLIPNKMQDTVIKK*
JGI24809J26612_10004937	3300002100	Soil	MKKLGLIIAVAFFAACNNAGNDSAKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSSMIPNKMPDTTMKK*
Ga0007429J51699_10779941	3300003579	Avena Fatua Rhizosphere	MRKIGMVMLIAFFAACNNAGTGTDKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGAKK*
Ga0006780_10378811	3300003735	Avena Fatua Rhizosphere	MLIAFFAACNNAGTGTDKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGAKK*
Ga0062589_1007684322	3300004156	Soil	MKKIGLIAVVAFFVACNNAGNSTKQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK*
Ga0062590_1015902852	3300004157	Soil	MKKVGIVMVIAFFAACNSAGNSSNKTDSSVTKDNTNMYDTGVGSSMTDTAQHRDTSLLPNKMQDTGMKK*
Ga0063356_10000167515	3300004463	Arabidopsis Thaliana Rhizosphere	MRTIGIVILIAFFAACNNAGNSTKQTDSSAAKDNTNMYDTGVGSSMTDTAQRLDTSLIPNKMQDTGIKK*
Ga0062592_1004182402	3300004480	Soil	MVIAFFAACNSAGNSSNKTDSSVTKDNTNMYDTGVGSSMTDTAQHRDTSLLPNKMQDTGMKK*
Ga0062592_1018126721	3300004480	Soil	MRKIAIIGLVAFFAACNNAGNSTNQTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGIKK*
Ga0066673_101599384	3300005175	Soil	VFAGFFAAACNNAGNSTKTTDSSAVKDNTNMYDTGVGSSMTDTSRRMDTSLLPNKMRDTGIKK*
Ga0065712_101536903	3300005290	Miscanthus Rhizosphere	GLIAVVAFFVACNNAGNSTKQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK*
Ga0070676_100083355	3300005328	Miscanthus Rhizosphere	MLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK*
Ga0070683_1012264541	3300005329	Corn Rhizosphere	LIAFFTACNNAGTGANKTDSSAVKDNTNMYDTGVSSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0066388_1088031381	3300005332	Tropical Forest Soil	MKKIGLIMVVAFFVACNNAGNSTNQTDSSATKDSAKDNTNMYDTGLGSSMTDTAQRRDTSLIPNKMQDTATKK*
Ga0068868_1001227202	3300005338	Miscanthus Rhizosphere	MKKLGMIMLIAFFTACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0070660_1002301563	3300005339	Corn Rhizosphere	MKKIGIIMLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK*
Ga0070689_1005234664	3300005340	Switchgrass Rhizosphere	MKKIGLIAVVAFFVACNNTGNSTNQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMHDTGTKK*
Ga0070689_1016572471	3300005340	Switchgrass Rhizosphere	FTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK*
Ga0070661_1000069461	3300005344	Corn Rhizosphere	MKKIGLIAVVAFFVACNNAGNSTKQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMHDTGTKK*
Ga0070661_1002443861	3300005344	Corn Rhizosphere	KQCMKKIGIIMLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK*
Ga0070661_1002714021	3300005344	Corn Rhizosphere	MLIAFFTACNNAGTGANKTDSSAVKDNTNMYDTGVSSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0070669_1002897924	3300005353	Switchgrass Rhizosphere	MAIAFFVACNNAGNSTKQTDSSASKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGIKK*
Ga0070675_1004280872	3300005354	Miscanthus Rhizosphere	MKKIGIIMLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSVKK*
Ga0070674_1016364881	3300005356	Miscanthus Rhizosphere	MLIAFFTACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0070688_1014847212	3300005365	Switchgrass Rhizosphere	MLIAFFTACNNSGYDSTKTDSAASKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK*
Ga0070659_1003898872	3300005366	Corn Rhizosphere	MKKIGLIAVVAFFAACNNTGNSTNQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK*
Ga0070667_1000378104	3300005367	Switchgrass Rhizosphere	MKKLGMIMLIAFFAACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0070667_1019643792	3300005367	Switchgrass Rhizosphere	KKQCMKKIGIIMLIAFFTACNNSGYDSTKTDSAASKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK*
Ga0070701_103833764	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLGMIILIAFFTACNNAGTGANKTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0070711_1018763352	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKKMGFIVVIAFFAACNSAGNSTNKTDSSAVKDNTNMYDTGVGSSATDTARRGDTSLIPNKMQDTGMKK*
Ga0070662_1004560374	3300005457	Corn Rhizosphere	MKKIGLIAVVAFFVACNNAGNSTKQTDSSATNDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK*
Ga0068867_1014317202	3300005459	Miscanthus Rhizosphere	MKKIGLIAVVAFFVACNNTGNSTNQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK*
Ga0073909_102653034	3300005526	Surface Soil	MKKFGLITLMPFFAACNNSGTGTNNTDSSAEKDNTNMYDTGVGSSMTDTAQRRDTSLIPNKIQDTSIKK*
Ga0070684_1004114742	3300005535	Corn Rhizosphere	MKKIGVIVAIAFFASCNNAGNSTNKTDSSATKDNTNMYDTGMGSSMTDTAQHRDTSLIPNKMQDTGIKK*
Ga0070672_1012274731	3300005543	Miscanthus Rhizosphere	KIGVIVAIAFFASCNNAGNSTNKTDSSATKDNTNMYDTGMGSSMTDTAQHRDTSLIPNKMQDTGIKK*
Ga0068855_1001596466	3300005563	Corn Rhizosphere	MKKIGVIMAIAFFASCNNAGNSTNKTDSSATKDNTNMYDTGMGSSMTDTAQHRDTSLIPNKMQDTGIKK*
Ga0070664_1014949702	3300005564	Corn Rhizosphere	MKKIGMIMLIAFFAACNNAGKSTNKTDSSAVKDNTNMYDTGVGSSMTDTAQRRDTALIPNKMQDTGIKK*
Ga0068854_1010032482	3300005578	Corn Rhizosphere	MKKVGIVMVIAFFAACNSAGNSSNTTDSSVTKDNTNMYDTGVGSSMTDTAQHRDTSLLPNKMQDTGMKK*
Ga0066706_103110702	3300005598	Soil	MKKIVLIACVTFFMAACNNSANESSVTDSTAKKDNTNMYDTGAGSSMTDTAHRMKDTSLLPNKMQDTGVKK*
Ga0068856_1014020271	3300005614	Corn Rhizosphere	MKKIGAIMAIVFFAACNNAGNSTNKTDSSATKDNTNMYDTGVGSSMTDTAQHRDTS
Ga0068864_1024660092	3300005618	Switchgrass Rhizosphere	KKIGMIMLIAFFAACNNAGKSTNKTDSSAVKDNTNMYDTGVGSSMTDTAQRRDTVLIPNKMQDTGIKK*
Ga0068870_102132534	3300005840	Miscanthus Rhizosphere	IAFFTACNNAGTGANKTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK
Ga0068863_1002191982	3300005841	Switchgrass Rhizosphere	MKKIGMIMLIAFFAACNNAGKSTNKTDSSAVKDNTNMYDTGVGSSMTDTAQRRDTVLIPNKMQDTGIKK*
Ga0068862_1000807312	3300005844	Switchgrass Rhizosphere	MKKIGLIMAIAFFVACNNAGNSTKQTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGIKK*
Ga0066651_108171021	3300006031	Soil	MKTIRLIVFAGFFAAACNNAGNSTKTTDSSAVKDNTNMYDTGVGSSMTDTSRRMDTSLLPNKMRDTGIKK*
Ga0066652_1001051843	3300006046	Soil	MKKVGMIMLIAFFAACNNAGTSTDTNKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTSVKK*
Ga0097621_1003633322	3300006237	Miscanthus Rhizosphere	MKKIGVIVAIAFFASCNNAGNSTNKTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGIKK*
Ga0097621_1006507272	3300006237	Miscanthus Rhizosphere	MRKIGIIMLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK*
Ga0079222_122243781	3300006755	Agricultural Soil	KQNMKKIGFIALIAFIAACNNAGNSTSKTDSSAVKDNTNMYDTGVGGSATDTARRGDTSLIPNKMQDTGMKK*
Ga0075434_1023474301	3300006871	Populus Rhizosphere	MKKLGMIILIAFFTACNNAGTGANKTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTLLMPNKMQDTSIKK*
Ga0075426_111307361	3300006903	Populus Rhizosphere	MKKLGMIILIAFFTACNSAGTGANKTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0105241_103043393	3300009174	Corn Rhizosphere	MKKFGMIMLIAFFTACNNAGTGANKTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0105242_121903692	3300009176	Miscanthus Rhizosphere	MKKLGMAMLIAFFAACNNSATDTNKTDSSAIKDNTNMYDTGVGRSMTDTAQHRDTSLIPNKMQDTGNKK*
Ga0126373_103446901	3300010048	Tropical Forest Soil	MKKIGLIVSAALFIAACNNAGNGTKTSDSPAVKDKTNMYDTGVGSSATDTGRRDTSLIPNKMQDTGMKK*
Ga0126370_121792431	3300010358	Tropical Forest Soil	MKKIGFVLCVTLIAAACNNAGNSTKTTDSVALKDKTNMYDTGVGSSATDTNRHDTSLIPNKMQDTGMKK*
Ga0134124_108066001	3300010397	Terrestrial Soil	IMLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK*
Ga0126383_123597742	3300010398	Tropical Forest Soil	MKKIGLIMVVGFFIACNNAGNSTYKTDSSATKDNTNMYDTGVGSSATDTAQHRDTSLIPNKMQDTGMKK*
Ga0134122_100946123	3300010400	Terrestrial Soil	MKKIGLFVVVAAFFAACNNTGNSTNKTDSSAIKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGIKK*
Ga0134122_108773231	3300010400	Terrestrial Soil	KTQHMKKLGMIMLIAFFTACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0126317_109813481	3300011332	Soil	AIVALIAFFACNNSANETGKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDTSLLLNKMPDTSIKK*
Ga0137365_100105254	3300012201	Vadose Zone Soil	MKTIGFIVLAGFFVAACNNAGKSTNTADSSAAKDNTNMYDTGVGSSMTDTTRRMDTSLLPNKSIKK*
Ga0137381_108270502	3300012207	Vadose Zone Soil	MKTIGFIVLAGFFVAACNNAGKSTNTADSSAAKDNTNMYDTGVGSSMTNTTRRMDTSLLPNKSIKK*
Ga0137376_115696912	3300012208	Vadose Zone Soil	MKTIGLIVFAVFFAIACNNAGNSTKTTDSSAVKDNTNMYDTGVGSSMTDTSRRMDTSSLPNKMRDTG
Ga0150985_1045204503	3300012212	Avena Fatua Rhizosphere	MKKIGMIMLIAFFAACNNSGTEASKTDSSAVKDNTNMYDTGVGSSMTDTAQHLDTSLIPNKMQDTGIKK*
Ga0150985_1073363024	3300012212	Avena Fatua Rhizosphere	GMIMLIAFFTACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0150985_1123351613	3300012212	Avena Fatua Rhizosphere	KKLGMIMLIAFFAACNNSGTGTNKTDSSAVKDNTNMYDTGAGSSMTDTAHHLDTSLIPNKMQDTGIKK*
Ga0150985_1133315212	3300012212	Avena Fatua Rhizosphere	MKKIGIAALVVWFAACNNSANDTGKTDSTGAKDNTNMYDTGVGSSMTDTSQRRDTSLLLNKQDTGIKK*
Ga0137367_107804262	3300012353	Vadose Zone Soil	MGLTLLAAFFAAACNNSGKNTNITDSTSTKDNTNMYDTGAGRSIIDTSHRTDTSLLPNKMPDTSIKK*
Ga0137369_110358522	3300012355	Vadose Zone Soil	MKTMGLTLLAAFFAAACNNSGKNTNITDSTSTKDNTNMYDTGAGRSIIDTSHRTDTSLLPNKMPDTSIKK*
Ga0150984_1064051333	3300012469	Avena Fatua Rhizosphere	MVMLIAFFAACNNAGTGTDKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGAKK*
Ga0150984_1234884041	3300012469	Avena Fatua Rhizosphere	KKLGMIMLIVFFAACNNSGTGTNKTDSSAVKDNTNMYDTGAGSSMTDTAHHLDTSLIPNKMQDTGIKK*
Ga0157325_10188921	3300012485	Arabidopsis Rhizosphere	MKKIGLIAVVAFFVACNNAGNSTKQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTTLIPNKMQDTGTKK*
Ga0164300_111233741	3300012951	Soil	MKKIGLIAVVAFFMACNNTGNSTNQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK*
Ga0164303_107558232	3300012957	Soil	MKKIGLIAVVAFIVACNNAGDSTNQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK
Ga0164309_117396202	3300012984	Soil	MKGLGMIMFVAIFAACNNSATDTNQTDSSAIKDNTNMYDTGIGSSMTDTAQHRDTSLIPNKMQDTGIKK*
Ga0164307_103981822	3300012987	Soil	MKKLGMIMLIAFFAACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMIDTAQHRDTSLMPNKMQDTSIKK*
Ga0164305_104688542	3300012989	Soil	MKKSGMVMLIAFFAACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0164305_106329713	3300012989	Soil	MKKLGMIMFVAIFAACNNSATDTNKTDSSAIKDNTNMYDTGVGSSMTDTAQHQDTSLIPNKMQDTGIKKYNYEYYNYCIWISIAVLL*
Ga0164305_110798571	3300012989	Soil	MKKIGLIAVVAFFVACNNTRNSTNQTDSSATKDNTNMYDTGMGSSMTDTAQHRDTSLIPNKMQDTGTKK*
Ga0157373_103450823	3300013100	Corn Rhizosphere	MKKIGLIAVVAFFVACNNTGNSTNQTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK*
Ga0157374_118728791	3300013296	Miscanthus Rhizosphere	MKKIGIIMLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTS
Ga0157378_121509093	3300013297	Miscanthus Rhizosphere	VVAFFVACNNTGNSTNQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMHDTGTKK*
Ga0157379_100230217	3300014968	Switchgrass Rhizosphere	MKKLGMIILIAFFTACNNAGTGAYKTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK*
Ga0157379_114754951	3300014968	Switchgrass Rhizosphere	VFITVAFIINLKKQCMKKIGIIMLIAFFTACNNSGYDSTKTDSAASKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK*
Ga0157376_108045061	3300014969	Miscanthus Rhizosphere	MKKIGLIAVVAFFVACNNTGNSTNQTDSSATKDNTNMYETGVGSSKTDTAQHRDTSLIPNKMQDTGTKK*
Ga0167632_10373962	3300015085	Glacier Forefield Soil	MKTIGFIVFAGFFAVACNNAGNSTKTADSSAAKDNTNMYDTGVGSSMTDTSRRMDTSLFT
Ga0132258_100144236	3300015371	Arabidopsis Rhizosphere	MVVLIAFFAACNSTGNGTNQTDSSATKDNTNMYDTGIGSSMTDTAQHLDTSSLQNKMQDTGIKK*
Ga0132258_101273773	3300015371	Arabidopsis Rhizosphere	MKKIGMVMLIAFFAACNNAGSGTNKTDSSATKDNTNMYDTGAGSSMTDTAQQRDTSLMPNKMQDTGMKK*
Ga0132258_107580106	3300015371	Arabidopsis Rhizosphere	MKKIGLIAVVAFFVACNNAGTSTNQTDSSATKDNTNMYDTGMGSSMTDTGQHRDTSLIPNKMQDTGTKK*
Ga0132256_1000155633	3300015372	Arabidopsis Rhizosphere	MKKVGIIALIAFFAACNNSGTGTNKTDSSAVKDNTNMYDTGVGSSMTDTTQNRDTTSLQNKKQDTSAKKY*
Ga0132257_1001167254	3300015373	Arabidopsis Rhizosphere	MKKVGIIALIAFFAACNNSGTGTNKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTTSLQNKKQDTSAKKY*
Ga0132257_1042462011	3300015373	Arabidopsis Rhizosphere	MKKMGIIALIAFFAACNNAGKSTNTTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSAIPNKVDTGTKK*
Ga0132255_1001190896	3300015374	Arabidopsis Rhizosphere	MKKIGIIALIAFFAACNNSGTGTNKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTTSFQDKKQDTSAKKY*
Ga0132255_1048280341	3300015374	Arabidopsis Rhizosphere	MKKIGLIMAIAFFVACNNAGNSTKQTDSSAAKDNTNMYDTGVGSSLTDTAQHRDTSLIPNKMQDTGIKK*
Ga0134069_13623611	3300017654	Grasslands Soil	CNNSANESSVSDSTAKKDNTNMYDTGAGSSMTDTAHRMKDTSLLPNKMQDTGVKK
Ga0163161_117514551	3300017792	Switchgrass Rhizosphere	MKKIGIIMLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK
Ga0187824_102648022	3300017927	Freshwater Sediment	MKKLGFFMLVGLIAVSCNNAGNSTKTTDSTAAKDNTNMYDTGVGSSATDTSHPKDTSLLPNKNQDTGMKH
Ga0066669_107464572	3300018482	Grasslands Soil	MKTIGLIVFAGFFTAACNNAGNSTKTTDSSAVKDNTNMYDTGVGSSMTDTSRRMDTSLLPNKMRDTGIKK
Ga0173482_105914592	3300019361	Soil	MKKVGIVMVIAFFAACNSAGNSSNTTDSSVTKDNTNMYDTGVGSSMTDTAQHRDTSLLTNKMQDTGMKK
Ga0193726_100127817	3300020021	Soil	VKPIVLLVAAAFFTTACNNAGNSTKTVESNATKDNTNMYDTGVGSSATDTSHRIDTSLIPNKMQDTAIKK
Ga0206351_102660301	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	KIGLIAVVAFFVACNNAGNSTKQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK
Ga0206350_108744513	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLGMIMLVAFFTACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK
Ga0247794_100333761	3300024055	Soil	MKKVGIVMVIAFFAACNSAGNSSNKTDSSVTKDNTNMYDTGVGSSMTDTAQHRDTSLLPNKMQDTGMKK
Ga0207688_101728152	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKKIGIIMLIAFFTACNNSGYDSTKTDSAASKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIKK
Ga0207647_100184546	3300025904	Corn Rhizosphere	MKKIGLIAVVAFFVACNNAGNSTKQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK
Ga0207647_106043483	3300025904	Corn Rhizosphere	MKKIGLIAVVAFFAACNNTGNSTNQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK
Ga0207695_105551674	3300025913	Corn Rhizosphere	MKKLGMIMLIAFFTACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK
Ga0207660_104058902	3300025917	Corn Rhizosphere	MKKVGIVMVIAFFAACNSAGNSSNKTDSSVTKDNTNMYDTGVGSSMTDTAQHRDTSLLTNKMQDTGMKK
Ga0207659_117076211	3300025926	Miscanthus Rhizosphere	KIGIIMLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSVKK
Ga0207644_100961311	3300025931	Switchgrass Rhizosphere	MKKIGMIMLIAFFAACNNAGTGANKTDSSAVKDNTNMHDTGVGSSMTDTAQHRDTSLMPNKMQ
Ga0207706_106305504	3300025933	Corn Rhizosphere	MKKIGLIAVVAFFVACNNAGNSTKQTDSSATNDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK
Ga0207686_116482302	3300025934	Miscanthus Rhizosphere	MLIAFFTACNNSGYDSTKTDSAAAKDNTNMYDTGVGSSMTDTAQRRDSVIPNRMQDTSIK
Ga0207704_107186252	3300025938	Miscanthus Rhizosphere	MKKLGMIILIAFFTACNNAGNGANKTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK
Ga0207691_110109811	3300025940	Miscanthus Rhizosphere	KIGVIVAIAFFASCNNAGNSTNKTDSSATKDNTNMYDTGMGSSMTDTAQHRDTSLIPNRMQDTGIKK
Ga0207679_101637102	3300025945	Corn Rhizosphere	MKKIGVIVAIAFFASCNNAGNSTNKTDSSATKDNTNMYDTGMGSSMTDTAQHRDTSLIPNKMQDTGIKK
Ga0207667_104546424	3300025949	Corn Rhizosphere	MKKIGVIMAIAFFASCNNAGNSTNKTDSSATKDNTNMYDTGMGSSMTDTAQHRDTSLIPNKMQDTGIKK
Ga0207658_100162604	3300025986	Switchgrass Rhizosphere	MKKLGMIMLIAFFTACNNAGTGANKTDSSAAKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK
Ga0207702_107303911	3300026078	Corn Rhizosphere	MKKIGAIMAIVFFAACNNAGNSTNKTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGIKK
Ga0207641_102573361	3300026088	Switchgrass Rhizosphere	MKKIGLIAVVAFFVACNNAGNSTKQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTG
Ga0207648_100885562	3300026089	Miscanthus Rhizosphere	MKKLGMIMLIAFFAACNNAGTGANKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLMPNKMQDTSIKK
Ga0207676_113211501	3300026095	Switchgrass Rhizosphere	TYYMKKIGMIMLIAFFAACNNAGKSTNKTDSSAVKDNTNMYDTGVGSSMTDTAQRRDTVLIPNKMQDTGIKK
Ga0268265_115023892	3300028380	Switchgrass Rhizosphere	MKKIGLIAVVAFFVACNNTGNSTNQTDSSATKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGTKK
Ga0170824_1000111703	3300031231	Forest Soil	MIMLIAFFAACNNSGTNTNKTDSSAVKDNTNMYDTGVGSSMTDTAQQRDTSLIPNKMQDTSVKK
Ga0310813_105669743	3300031716	Soil	MKKIGFIALIAFLAACNNAGTGTNKTDSSAAKDNTNVYDTGVGSSATDTARRGDTSLMPNKMQDTGMKK
Ga0307468_1003832643	3300031740	Hardwood Forest Soil	MKKLGMIMLVAFFAACNNSGTDTTKTDSSAVKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTAIKK
Ga0307472_1008351092	3300032205	Hardwood Forest Soil	MKKIGLFVVVAAFFAACNNTGNSTNKTDSSAIKDNTNMYDTGVGSSMTDTAQHRDTSLIPNKMQDTGIKK
Ga0310811_101348304	3300033475	Soil	MKKIGFIALIAFLAACNNAGTGTNKTDSSAAKDNTNMYDTGVGSSATDTARRGDTSLMPNKMQDTGMKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060076

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences