NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F060067

Metagenome / Metatranscriptome Family F060067

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F060067
Family Type Metagenome / Metatranscriptome
Number of Sequences 133
Average Sequence Length 51 residues
Representative Sequence LDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGAL
Number of Associated Samples 123
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.96 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 92.48 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(24.812 % of family members)
Environment Ontology (ENVO) Unclassified
(32.331 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.128 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.90%    β-sheet: 0.00%    Coil/Unstructured: 64.10%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF11946DUF3463 87.97
PF13243SQHop_cyclase_C 5.26
PF13249SQHop_cyclase_N 2.26
PF01593Amino_oxidase 1.50
PF00582Usp 0.75
PF00884Sulfatase 0.75
PF02653BPD_transp_2 0.75


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2070309009|GPKNP_GG3DY5401EVGXOAll Organisms → cellular organisms → Bacteria → Terrabacteria group523Open in IMG/M
2088090014|GPIPI_16488623All Organisms → cellular organisms → Bacteria1494Open in IMG/M
2124908016|OU_2316All Organisms → cellular organisms → Bacteria → Terrabacteria group672Open in IMG/M
3300001686|C688J18823_10001423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia14717Open in IMG/M
3300002568|C688J35102_118853436All Organisms → cellular organisms → Bacteria → Terrabacteria group605Open in IMG/M
3300002568|C688J35102_119148243All Organisms → cellular organisms → Bacteria → Terrabacteria group645Open in IMG/M
3300004081|Ga0063454_101005799All Organisms → cellular organisms → Bacteria → Terrabacteria group671Open in IMG/M
3300004081|Ga0063454_101278322All Organisms → cellular organisms → Bacteria → Terrabacteria group613Open in IMG/M
3300004114|Ga0062593_101814050All Organisms → cellular organisms → Bacteria → Terrabacteria group671Open in IMG/M
3300004157|Ga0062590_102830065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9519Open in IMG/M
3300004480|Ga0062592_102194509All Organisms → cellular organisms → Bacteria → Terrabacteria group550Open in IMG/M
3300004800|Ga0058861_11620568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9572Open in IMG/M
3300005166|Ga0066674_10489306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9556Open in IMG/M
3300005167|Ga0066672_10860623All Organisms → cellular organisms → Bacteria → Proteobacteria565Open in IMG/M
3300005177|Ga0066690_10453391All Organisms → cellular organisms → Bacteria → Terrabacteria group868Open in IMG/M
3300005294|Ga0065705_10986320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9551Open in IMG/M
3300005337|Ga0070682_100125591All Organisms → cellular organisms → Bacteria1728Open in IMG/M
3300005341|Ga0070691_10322837All Organisms → cellular organisms → Bacteria → Terrabacteria group850Open in IMG/M
3300005406|Ga0070703_10313795All Organisms → cellular organisms → Bacteria → Proteobacteria658Open in IMG/M
3300005436|Ga0070713_101850388All Organisms → cellular organisms → Bacteria → Terrabacteria group586Open in IMG/M
3300005450|Ga0066682_10418486All Organisms → cellular organisms → Bacteria → Terrabacteria group856Open in IMG/M
3300005468|Ga0070707_100833050All Organisms → cellular organisms → Bacteria → Terrabacteria group886Open in IMG/M
3300005526|Ga0073909_10237388All Organisms → cellular organisms → Bacteria → Proteobacteria805Open in IMG/M
3300005540|Ga0066697_10445625All Organisms → cellular organisms → Bacteria → Terrabacteria group746Open in IMG/M
3300005547|Ga0070693_101488993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9529Open in IMG/M
3300005557|Ga0066704_10574634All Organisms → cellular organisms → Bacteria → Terrabacteria group730Open in IMG/M
3300005558|Ga0066698_10531541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium799Open in IMG/M
3300005559|Ga0066700_10231701All Organisms → cellular organisms → Bacteria1286Open in IMG/M
3300005574|Ga0066694_10589038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9518Open in IMG/M
3300005575|Ga0066702_10738982All Organisms → cellular organisms → Bacteria → Terrabacteria group586Open in IMG/M
3300005764|Ga0066903_106729751All Organisms → cellular organisms → Bacteria → Terrabacteria group598Open in IMG/M
3300006046|Ga0066652_101593492All Organisms → cellular organisms → Bacteria → Terrabacteria group601Open in IMG/M
3300006237|Ga0097621_101106679All Organisms → cellular organisms → Bacteria → Terrabacteria group744Open in IMG/M
3300006796|Ga0066665_11604069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9512Open in IMG/M
3300006854|Ga0075425_100053063All Organisms → cellular organisms → Bacteria4539Open in IMG/M
3300006880|Ga0075429_100879859All Organisms → cellular organisms → Bacteria → Terrabacteria group784Open in IMG/M
3300007076|Ga0075435_101838448All Organisms → cellular organisms → Bacteria → Terrabacteria group532Open in IMG/M
3300007258|Ga0099793_10049023All Organisms → cellular organisms → Bacteria1856Open in IMG/M
3300009012|Ga0066710_100147223All Organisms → cellular organisms → Bacteria3267Open in IMG/M
3300009012|Ga0066710_103842417All Organisms → cellular organisms → Bacteria → Terrabacteria group563Open in IMG/M
3300009012|Ga0066710_103971331All Organisms → cellular organisms → Bacteria → Terrabacteria group554Open in IMG/M
3300009092|Ga0105250_10247790All Organisms → cellular organisms → Bacteria → Terrabacteria group761Open in IMG/M
3300009093|Ga0105240_11848208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9629Open in IMG/M
3300010029|Ga0105074_1045821All Organisms → cellular organisms → Bacteria → Terrabacteria group767Open in IMG/M
3300010039|Ga0126309_11168927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9527Open in IMG/M
3300010114|Ga0127460_1054786All Organisms → cellular organisms → Bacteria → Terrabacteria group514Open in IMG/M
3300010152|Ga0126318_10380783All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300010326|Ga0134065_10123933All Organisms → cellular organisms → Bacteria → Terrabacteria group880Open in IMG/M
3300012198|Ga0137364_10401782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1025Open in IMG/M
3300012198|Ga0137364_11221363All Organisms → cellular organisms → Bacteria → Terrabacteria group562Open in IMG/M
3300012212|Ga0150985_104196318All Organisms → cellular organisms → Bacteria → Terrabacteria group1200Open in IMG/M
3300012212|Ga0150985_112653370All Organisms → cellular organisms → Bacteria → Terrabacteria group711Open in IMG/M
3300012353|Ga0137367_10110628All Organisms → cellular organisms → Bacteria2021Open in IMG/M
3300012354|Ga0137366_10397822All Organisms → cellular organisms → Bacteria → Terrabacteria group1003Open in IMG/M
3300012356|Ga0137371_10941024All Organisms → cellular organisms → Bacteria → Terrabacteria group656Open in IMG/M
3300012378|Ga0134025_1102850All Organisms → cellular organisms → Bacteria → Terrabacteria group500Open in IMG/M
3300012397|Ga0134056_1211939All Organisms → cellular organisms → Bacteria → Terrabacteria group1127Open in IMG/M
3300012403|Ga0134049_1169438All Organisms → cellular organisms → Bacteria → Terrabacteria group690Open in IMG/M
3300012404|Ga0134024_1024423All Organisms → cellular organisms → Bacteria → Terrabacteria group651Open in IMG/M
3300012405|Ga0134041_1123471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9640Open in IMG/M
3300012469|Ga0150984_108759843All Organisms → cellular organisms → Bacteria → Terrabacteria group1250Open in IMG/M
3300012582|Ga0137358_10341128All Organisms → cellular organisms → Bacteria → Terrabacteria group1015Open in IMG/M
3300012917|Ga0137395_10561423All Organisms → cellular organisms → Bacteria → Terrabacteria group824Open in IMG/M
3300012929|Ga0137404_10375481All Organisms → cellular organisms → Bacteria1249Open in IMG/M
3300015077|Ga0173483_10818510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9539Open in IMG/M
3300015356|Ga0134073_10387213All Organisms → cellular organisms → Bacteria → Terrabacteria group523Open in IMG/M
3300015358|Ga0134089_10505627All Organisms → cellular organisms → Bacteria → Terrabacteria group530Open in IMG/M
3300015372|Ga0132256_100143239All Organisms → cellular organisms → Bacteria2388Open in IMG/M
3300018000|Ga0184604_10186521All Organisms → cellular organisms → Bacteria → Terrabacteria group704Open in IMG/M
3300018027|Ga0184605_10042838All Organisms → cellular organisms → Bacteria1906Open in IMG/M
3300018054|Ga0184621_10375673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9500Open in IMG/M
3300018066|Ga0184617_1056048All Organisms → cellular organisms → Bacteria → Terrabacteria group1015Open in IMG/M
3300018066|Ga0184617_1080961All Organisms → cellular organisms → Bacteria → Terrabacteria group880Open in IMG/M
3300018071|Ga0184618_10213697All Organisms → cellular organisms → Bacteria → Terrabacteria group809Open in IMG/M
3300018072|Ga0184635_10165867All Organisms → cellular organisms → Bacteria → Terrabacteria group882Open in IMG/M
3300018431|Ga0066655_11033364All Organisms → cellular organisms → Bacteria → Terrabacteria group570Open in IMG/M
3300018433|Ga0066667_11303689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9635Open in IMG/M
3300019279|Ga0184642_1588124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9506Open in IMG/M
3300019867|Ga0193704_1013010All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300020004|Ga0193755_1167051All Organisms → cellular organisms → Bacteria → Terrabacteria group656Open in IMG/M
3300020006|Ga0193735_1061125All Organisms → cellular organisms → Bacteria → Terrabacteria group1103Open in IMG/M
3300020022|Ga0193733_1025178All Organisms → cellular organisms → Bacteria1680Open in IMG/M
3300020022|Ga0193733_1184330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9545Open in IMG/M
3300021078|Ga0210381_10247532All Organisms → cellular organisms → Bacteria → Terrabacteria group633Open in IMG/M
3300022756|Ga0222622_10037723All Organisms → cellular organisms → Bacteria2634Open in IMG/M
3300025903|Ga0207680_10312593All Organisms → cellular organisms → Bacteria → Terrabacteria group1097Open in IMG/M
3300025942|Ga0207689_10181341All Organisms → cellular organisms → Bacteria1736Open in IMG/M
3300025960|Ga0207651_10114301All Organisms → cellular organisms → Bacteria2033Open in IMG/M
3300026023|Ga0207677_12302880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9501Open in IMG/M
3300026297|Ga0209237_1230151All Organisms → cellular organisms → Bacteria → Terrabacteria group573Open in IMG/M
3300026300|Ga0209027_1197901All Organisms → cellular organisms → Bacteria → Terrabacteria group649Open in IMG/M
3300026301|Ga0209238_1246502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9531Open in IMG/M
3300026305|Ga0209688_1067321All Organisms → cellular organisms → Bacteria → Terrabacteria group646Open in IMG/M
3300026327|Ga0209266_1148048All Organisms → cellular organisms → Bacteria → Terrabacteria group954Open in IMG/M
3300026331|Ga0209267_1314819All Organisms → cellular organisms → Bacteria → Terrabacteria group519Open in IMG/M
3300026334|Ga0209377_1164288All Organisms → cellular organisms → Bacteria → Terrabacteria group818Open in IMG/M
3300026528|Ga0209378_1256589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9555Open in IMG/M
3300026550|Ga0209474_10047057All Organisms → cellular organisms → Bacteria3108Open in IMG/M
3300026552|Ga0209577_10156444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1787Open in IMG/M
3300026552|Ga0209577_10827141All Organisms → cellular organisms → Bacteria → Terrabacteria group518Open in IMG/M
3300026929|Ga0207461_1001774All Organisms → cellular organisms → Bacteria → Terrabacteria group862Open in IMG/M
3300027560|Ga0207981_1061435All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300028381|Ga0268264_11514781All Organisms → cellular organisms → Bacteria → Terrabacteria group681Open in IMG/M
3300028719|Ga0307301_10169465All Organisms → cellular organisms → Bacteria → Terrabacteria group705Open in IMG/M
3300028721|Ga0307315_10133198All Organisms → cellular organisms → Bacteria → Terrabacteria group747Open in IMG/M
3300028744|Ga0307318_10344339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9525Open in IMG/M
3300028771|Ga0307320_10285434All Organisms → cellular organisms → Bacteria → Terrabacteria group654Open in IMG/M
3300028784|Ga0307282_10183934All Organisms → cellular organisms → Bacteria → Terrabacteria group996Open in IMG/M
3300028787|Ga0307323_10129369All Organisms → cellular organisms → Bacteria → Terrabacteria group909Open in IMG/M
3300028799|Ga0307284_10297873All Organisms → cellular organisms → Bacteria → Terrabacteria group647Open in IMG/M
3300028819|Ga0307296_10174101All Organisms → cellular organisms → Bacteria → Terrabacteria group1166Open in IMG/M
3300028824|Ga0307310_10047998All Organisms → cellular organisms → Bacteria1775Open in IMG/M
3300028828|Ga0307312_10053105All Organisms → cellular organisms → Bacteria2426Open in IMG/M
3300028872|Ga0307314_10125552All Organisms → cellular organisms → Bacteria → Terrabacteria group722Open in IMG/M
3300028878|Ga0307278_10492992All Organisms → cellular organisms → Bacteria → Terrabacteria group535Open in IMG/M
3300028884|Ga0307308_10166557All Organisms → cellular organisms → Bacteria → Terrabacteria group1055Open in IMG/M
3300028885|Ga0307304_10000095All Organisms → cellular organisms → Bacteria16365Open in IMG/M
3300030902|Ga0308202_1157065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9510Open in IMG/M
3300030904|Ga0308198_1091112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9524Open in IMG/M
3300030905|Ga0308200_1164629All Organisms → cellular organisms → Bacteria → Terrabacteria group521Open in IMG/M
3300030993|Ga0308190_1117932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9600Open in IMG/M
3300031058|Ga0308189_10050179All Organisms → cellular organisms → Bacteria → Terrabacteria group1155Open in IMG/M
3300031058|Ga0308189_10328528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9608Open in IMG/M
3300031082|Ga0308192_1054933All Organisms → cellular organisms → Bacteria → Terrabacteria group605Open in IMG/M
3300031091|Ga0308201_10033151All Organisms → cellular organisms → Bacteria → Terrabacteria group1189Open in IMG/M
3300031097|Ga0308188_1010735All Organisms → cellular organisms → Bacteria → Terrabacteria group786Open in IMG/M
3300031170|Ga0307498_10054822All Organisms → cellular organisms → Bacteria → Terrabacteria group1093Open in IMG/M
3300031366|Ga0307506_10285813All Organisms → cellular organisms → Bacteria → Terrabacteria group640Open in IMG/M
3300031424|Ga0308179_1003531All Organisms → cellular organisms → Bacteria → Terrabacteria group1252Open in IMG/M
3300031740|Ga0307468_102365948All Organisms → cellular organisms → Bacteria → Terrabacteria group517Open in IMG/M
3300031938|Ga0308175_101057596All Organisms → cellular organisms → Bacteria → Terrabacteria group899Open in IMG/M
3300032180|Ga0307471_101818604All Organisms → cellular organisms → Bacteria → Terrabacteria group760Open in IMG/M
3300034680|Ga0370541_037022All Organisms → cellular organisms → Bacteria → Terrabacteria group605Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil24.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.54%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.02%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.26%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.01%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.26%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.50%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.50%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.50%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.50%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.75%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.75%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.75%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.75%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.75%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.75%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.75%
Environmental → Unclassified → Unclassified → Unclassified → Unclassified → 0.75%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.75%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2070309009Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2124908016Sample 642EnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004800Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010114Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012378Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012404Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012405Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026929Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3w-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031082Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031097Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031424Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300034680Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPKNP_048776502070309009SoilVVADGLIFACAMTVEERIARRLGPTALVGLGVANGVPEGRLVSFG
GPIPI_015471202088090014SoilMSVEERIARRLGPTVRIGLGAANGIPREGRLVSFGIAGALRPGLEIGTVIDATRV
OU_006140402124908016VDAVGLTFCTAMTVEERIARRLGATARVGLGASNGVPSDGRLV
C688J18823_10001423133300001686SoilVDAHGLTFACAMTVEERIARRLGPTALVGLGASRGVPEGRLVSFGIAGA
C688J35102_11885343623300002568SoilVDLDGLTFACAMTAEQRAARRLGPTVLVGLAVANGVPEGRLVSFGVAGALRPGL
C688J35102_11914824323300002568SoilLDLDGLTFAVAMTAEEKIARKLGPTARVGLAVSNGVPDGKLVSFGIAGSLRRDLAIGTVIDATR
Ga0063454_10100579923300004081SoilVDAVGLTFCAAMAVEERIARRLGPTALVGLGAANGVPTDDRLVSFGIAGAL
Ga0063454_10127832213300004081SoilLDADGLEGEALTFACAMSVEERIARRLGPTVRIGLGAANGLPPEGRFV
Ga0062593_10181405023300004114SoilLDADGLIFACAMSVEERIARRLGPTARLGLGATNGIPSEGRLVSFGIAGALRPGL
Ga0062590_10283006523300004157SoilLDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGALAP
Ga0062592_10219450913300004480SoilLDADGLAGEGLTFACAMSVEERIARRLGPTVRVGLGAANGIPP
Ga0058861_1162056813300004800Host-AssociatedLDADGLTFACAMTVEERIARRLGWTAVVGLGASKGVPEGRLVSFGIAGALSGELAVGTV
Ga0066674_1048930623300005166SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELP
Ga0066672_1086062323300005167SoilMSVEERIARRLGPTVRIGLGAANGIPPEGRFVSFGIAGALAPGLEIGTVIDATRV
Ga0066690_1045339123300005177SoilLDADVLTFACAMSVEQRIARRLGATVRVGLGAANGIPGEGRFVSF
Ga0065705_1098632023300005294Switchgrass RhizosphereLDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGR
Ga0070682_10012559113300005337Corn RhizosphereLDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGAL
Ga0070691_1032283713300005341Corn, Switchgrass And Miscanthus RhizosphereMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSRELAVGTVIDAT
Ga0070703_1031379523300005406Corn, Switchgrass And Miscanthus RhizosphereMSVEERIARRLGPTVRIGLGAANGIPPEGRLVSFGIAGALRPGLEVGTVIDATR
Ga0070713_10185038823300005436Corn, Switchgrass And Miscanthus RhizosphereLDADGLTFACAMTAEERIARRLGPAVRVGLAVSRPAPEGRLVSFGIAGSLRSDLPI
Ga0066682_1041848613300005450SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPDGRLVSFGIA
Ga0070707_10083305023300005468Corn, Switchgrass And Miscanthus RhizosphereLDADGLAGEGLTFACAMSVEERIARRLGPTVRIGLGAANGIP
Ga0073909_1023738813300005526Surface SoilLDADGLIFACAMSVEERIARRLGPTARLGLGAANGIPSEGRLVSFGIAGALRPGLEVGTV
Ga0066697_1044562513300005540SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGAAKGVPEGRLVSFGIAGALDAE
Ga0070693_10148899323300005547Corn, Switchgrass And Miscanthus RhizosphereLDADGLTFACAMTVEERIARRLGQTAVVGLGASKGVPEGR
Ga0066704_1057463423300005557SoilLDAHGLTFACAMGAEERIARRLGPTVRVGLAAANGVPEGRLVS
Ga0066698_1053154113300005558SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGQLVSFGIAGALSGELPVGTVIDA
Ga0066700_1023170113300005559SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPDGRLVSFG
Ga0066694_1058903813300005574SoilVDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIA
Ga0066702_1073898223300005575SoilVDVDGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGALAAYLPIGTVIDA
Ga0066903_10672975113300005764Tropical Forest SoilLDADGLIFACAMTAEERIARRLGPATRIGLAAARGIPEGRLVSFGIAG
Ga0066652_10159349223300006046SoilVDADGLTFACAMTVEERIARRLGHTAIVGLGASKGVPEGQ
Ga0097621_10110667923300006237Miscanthus RhizosphereLDADGLTFACAMTVEERIARRFGQTAVVGLGASKGVPEGRLVSFGIA
Ga0066665_1160406923300006796SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGAAKGVPEGRLVSFGIAGALDAELPVG
Ga0075425_10005306353300006854Populus RhizosphereLDADGLTFACAMTVEERIARRLGRTALVGLAASRGVPE
Ga0075429_10087985913300006880Populus RhizosphereLDPDGLIFGCAMGVEERIARRLGPTVRLGLGASSGIPTEGRFVSFGIAGALRPGLEIGTVIDA
Ga0075435_10183844823300007076Populus RhizosphereVDAVGLTFACAMTVEERIARRLGRTALVGLAVANGVPDGRLVSFGVAGAL
Ga0099793_1004902343300007258Vadose Zone SoilMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELPVGTVIDATR
Ga0066710_10014722313300009012Grasslands SoilVDTDRLTFACAMTVEERIARRFGPTTLVGLGVSRGVPAGERLVSFGIAGSLGPDLPVGTLIDATR
Ga0066710_10384241713300009012Grasslands SoilVDVDGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAG
Ga0066710_10397133113300009012Grasslands SoilLVADGLTFACAMTVEERIARRLGKTALVGLAVSNGVPEGGRLVS
Ga0105250_1024779013300009092Switchgrass RhizosphereMTVEERIARRLGRTAVVGLGASKGVPEGRLASFGIAGALSRELAVGTVIDATR
Ga0105240_1184820813300009093Corn RhizosphereMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSRELAVGTVIDA
Ga0105074_104582113300010029Groundwater SandVDADGLTFACAMTVEERIARRFGRTALVGLGAANGVPEGRLVSFGIAGALSG
Ga0126309_1116892723300010039Serpentine SoilVDAVGLTFCCAMTVEERLARRLGPTALVGLGASNGVPAEGRLVSFGIAGALHGDLPIGTV
Ga0127460_105478623300010114Grasslands SoilVDADGLTFACAMTVEERIARRLGRTALVGLGASKGVPEGRLVSFGIAGALADDL
Ga0126318_1038078313300010152SoilLDADGLTFACAITAEERIARRLGATARVGLAAANGVPEGRLVSFGIAGSLRGDLPVGTVIDAT
Ga0134065_1012393323300010326Grasslands SoilMTVEERIARRLGRTALVGLGASRGVPDGRLVSFGIAGALSADLPIGTVIDAT
Ga0137364_1040178213300012198Vadose Zone SoilVVADGLIFACAMTVEERIARRLGPTVRVGLGVAKGVPGGRLISFGIAGAL
Ga0137364_1122136313300012198Vadose Zone SoilLDADGLTFACAMGVEERIARRLGRTAVVGLAASRGVPEGRLVSFGIA
Ga0150985_10419631813300012212Avena Fatua RhizosphereLDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGALAPDLPV
Ga0150985_11265337013300012212Avena Fatua RhizosphereLDADGLTFACAMTAEERIARRLGPAVRVGLAMSRPAPEGRLVSFGIAGSLRSD
Ga0137367_1011062833300012353Vadose Zone SoilLDADGLTFACAMTVEERIARRLGRTALVGLGASKGVPEGRLVSFGIAGALSPDLPVGTVIDATRIVD
Ga0137366_1039782223300012354Vadose Zone SoilMTVEERIARRLGRTALVGLGASNGVPAGRLVSFGIAGALADDLPVGTVI
Ga0137371_1094102423300012356Vadose Zone SoilVDAVGLTFACAMTVEERIARRLGTTALVGLGAANGVPEGRLVSFGIAGALRGDLPVG
Ga0134025_110285013300012378Grasslands SoilMGVEERIARRLGPTVRLGLGAANGLPTDGRLVSFGIAGALRPGLEIGTVIDATR
Ga0134056_121193923300012397Grasslands SoilMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELPVGTVIDAT
Ga0134049_116943823300012403Grasslands SoilVVADGLIFACAMTVEERIARRLGPTVRVGLGVTKGVPDGRLVS
Ga0134024_102442323300012404Grasslands SoilMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGALAPDLPIGTVIDATRIVD
Ga0134041_112347123300012405Grasslands SoilVDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGALSSDLPIGTVIDA
Ga0150984_10875984313300012469Avena Fatua RhizosphereVDAHGLTFACAMTVEERIARRLGPTALVGLGASRGVPEGRLVSFGIAGALAPALPVGAPLGAPRVGDGPGAGVR
Ga0137358_1034112823300012582Vadose Zone SoilLIFACAMSVEERIARRLGPTVRLGLGAANGIPSEGRLVSFGIAGALRAGLEVGTVIDA
Ga0137395_1056142313300012917Vadose Zone SoilMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELPVGTVID
Ga0137404_1037548113300012929Vadose Zone SoilMDADGLTFACALTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGA
Ga0173483_1081851013300015077SoilMTVEERIARRLGQTAVVGLGASKGVPEGRLVSFGIAGALSGELPVGTVIDATR
Ga0134073_1038721313300015356Grasslands SoilMGVEERIARRLGPTVRLGLGASRGIPSEGRLVSFGVAGALRAGLEIGTVIDATR
Ga0134089_1050562723300015358Grasslands SoilMTVEERIARRLGHTAIVGLGASKGVPEGQLVSFGIAGALSRELPIGTVIDAT
Ga0132256_10014323913300015372Arabidopsis RhizosphereLDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSF
Ga0184604_1018652123300018000Groundwater SedimentLDADGLTFACAMTVEERIARRLGQTAVVGLGASKGVPEGRLVSFGIAGAL
Ga0184605_1004283833300018027Groundwater SedimentLDADGLTFACAMGVEERIARRLGRTAVVGLGASRGVPEGRLVSFGIAG
Ga0184621_1037567313300018054Groundwater SedimentLDADGLTFACAMTVEERIARRLGRTAVVGLGVSKGVPEGRLVSFGIAGALSGDLPVGTVI
Ga0184617_105604813300018066Groundwater SedimentLDADGLTFACAMTVEERIARRLGQTAVVGLGASKGVPEGRLVSFGIAGALSG
Ga0184617_108096113300018066Groundwater SedimentLDVDGLTFVCAMTVEERIARRLGRTAIVGLGASKGVPEGRLVSFGIA
Ga0184618_1021369723300018071Groundwater SedimentLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVP
Ga0184635_1016586713300018072Groundwater SedimentLDADGLTFVCAMTVEERIARRLGRTAIVGLGASKGVPEGRLVS
Ga0066655_1103336423300018431Grasslands SoilVDAVGLIFACAMSVEERAARRLGPTVRVGLGASNGVPEVDRLVSFGIAGALRGDLPVGTVIDA
Ga0066667_1130368913300018433Grasslands SoilVDVDGLTFACALTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGALTADLPIGTVI
Ga0184642_158812413300019279Groundwater SedimentLDVDGLTFACAMTVQERIARRLGRTAVVGLGASKGVPEGRL
Ga0193704_101301013300019867SoilLDADGLTFACAMGVEERIARRLGRTAVVGLGASRGVPEGRLVSFGIAGALAPDLPVGT
Ga0193755_116705123300020004SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPE
Ga0193735_106112523300020006SoilLDADGLTFACAMTVEERIARRLGQTAVVGLGASKGVPEGRL
Ga0193733_102517813300020022SoilLDADRLIYACAMSVEERIAKRLGPTLRVGLGASRGIPAEGRRLVSFGIAGALRPGLEI
Ga0193733_118433023300020022SoilLDVDGLTFVCAMTVEERIARRLGRTAIVGLGASKGVPEGRLVS
Ga0210381_1024753213300021078Groundwater SedimentLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRL
Ga0222622_1003772313300022756Groundwater SedimentLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELAVGTVIDATRV
Ga0207680_1031259323300025903Switchgrass RhizosphereLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELAV
Ga0207689_1018134113300025942Miscanthus RhizosphereLDADGLTFACAMTVEERIARRFGQTAVVGLGASKGV
Ga0207651_1011430133300025960Switchgrass RhizosphereLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSF
Ga0207677_1230288023300026023Miscanthus RhizosphereLDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGALAPDLPVGTVIDATR
Ga0209237_123015123300026297Grasslands SoilVDAVGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGALSRE
Ga0209027_119790113300026300Grasslands SoilLVADGLTFACAMTVEERIARRLGKTALVGLAVSNGVPEGGRLVSFGIA
Ga0209238_124650213300026301Grasslands SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELPVGTVIDAT
Ga0209688_106732123300026305SoilLDAHGLSLVYACAMGVEERIARRLGPTVRLGLGAANG
Ga0209266_114804813300026327SoilVDADGLTFACAMTVEERIARRLGHTAIVGLGASKGVPEGQLVSFGIAGALSRELPIGT
Ga0209267_131481913300026331SoilVDVDGLTFACALTVEERIARRLGRTALVGLGASRGV
Ga0209377_116428813300026334SoilVDAVGLTFACAMTVEERIARRLGRTALVGLGVANGVPDGDRLVSFGIAGALRGDLPVGTV
Ga0209378_125658923300026528SoilVDADGLTFACAMTVEERIARRLGHTAIVGLGASKGVPEGQLVSFGIAGALSRELPIGTVI
Ga0209474_1004705713300026550SoilLDADGLTFACAMSVEERIARRLGPTVRVGLGAANGIPGEGRVVSFGI
Ga0209577_1015644413300026552SoilVDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPEGRLVSFGIAGALSADLPIGTVIDATRV
Ga0209577_1082714113300026552SoilMSVEERIARRLGPTVRIGLGAANGLPPEGRFVSFGIAGALAPGLEIGTVIDATR
Ga0207461_100177413300026929SoilLDADGLTFACAMTVEERIARRLGQTAVVGLGAAKGVPEGRLVSFGIAGALSGE
Ga0207981_106143513300027560SoilLDTDGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALS
Ga0268264_1151478123300028381Switchgrass RhizosphereLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGAL
Ga0307301_1016946523300028719SoilLDADGLTFACAMTVEERIARRFGQTAVVGLGASKGVPEGRLVSFGIAGALSGE
Ga0307315_1013319813300028721SoilLDADGLTFACAMGVEERIARRLGRTAVVGLGASRGVPEGRLV
Ga0307318_1034433913300028744SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELAVGTVIDA
Ga0307320_1028543413300028771SoilVDADGLTFACAMTVEERIARRLGRTALVGLGASRGVPAEGRLVSFGIAGAL
Ga0307282_1018393423300028784SoilLDADGLTFACAMTVEERIARRLGQTAVVGLGASKGVPEGRLVSFGIAGALSGELPVGTVIDAT
Ga0307323_1012936923300028787SoilLDADGLTFACAMTVEERIARRLGQTAVVGLGASKGVPEGRLVSFGIAGALSGELPVGT
Ga0307284_1029787313300028799SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELPV
Ga0307296_1017410113300028819SoilVDADGLTFACAMTVEERIARRLGRTALVGLGATRGVPEGKLVSFGIAGALSGDMP
Ga0307310_1004799813300028824SoilLDADGLTFACAMTVEERIARRLGPTALVGLGASKGVPEGR
Ga0307312_1005310533300028828SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGE
Ga0307314_1012555223300028872SoilLDADGLTFACAMTVEERIARRLGPTALVGLGASKGVPEGRLVSFGIA
Ga0307278_1049299223300028878SoilVDADGLTFACAMTVEERIARRFGRTALVGLGAAKG
Ga0307308_1016655723300028884SoilMSVEERIARRLGPTVRIGLGAANGIPPEGRLVSFGIAGALRPGLEIGTVIDATR
Ga0307304_10000095183300028885SoilLDVDGLTFVCAMTVEERIARRLGRTAIVGLGASKGVPEGRLVSFGIAGALPGEL
Ga0308202_115706523300030902SoilLDADGLTFACAMTVEERIARRLGQTAVGGLGASKGVPEGRLVSFGIAGALSGELP
Ga0308198_109111223300030904SoilLDADGLTFACAMTVEERIARRLGRTAIVGLGASKGVPEGRLVSFGIAGALSGELAVGTVIDATCVVDESGAVLWEG
Ga0308200_116462913300030905SoilLDADGLIFACAMGVEERIAKRLGPTVRVGLGAAGGIPSEERLVSFGIAGALRPGLEI
Ga0308190_111793223300030993SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGA
Ga0308189_1005017913300031058SoilLDADGLIFACAMGVEERIAKRLGPTLRVGLGASRGIPAEGRRLVSFGIAGALRPGL
Ga0308189_1032852823300031058SoilLDADGLTFACAMTVEERIARRLGPTALVGLGASKGVPEGRLVSFAIAGALSPDL
Ga0308192_105493323300031082SoilLDVDGLTFVCAMTVEERIARRLGRTAIVGLGASKGVPEG
Ga0308201_1003315113300031091SoilLDADGLTFACAMTVEERIARRLGRTAIVGLGASKGVPEGRLVSFGIAGALSGE
Ga0308188_101073513300031097SoilLDADGLTFACAMTVEERIARRLGRTAVVGLGASKGVPEGRLV
Ga0307498_1005482213300031170SoilMTVEERIARRLGRTAVVGLGASKGVPEGRLVSFGIAGALSGELAVGTVIDATR
Ga0307506_1028581323300031366SoilLDADGLTFACAMTVEERIARRFGQTAVVGLGASKGVPEGRLV
Ga0308179_100353113300031424SoilMTVEERIARRLGRTAIVGLGASKGVPEGRLVSFGIAGALSGELAVGTVIDATCVVDESGAVL
Ga0307468_10236594823300031740Hardwood Forest SoilLDADGLIYVCAMSVEERIAKRLGPTVRVGLGASRGIPAEGRRL
Ga0308175_10105759623300031938SoilVSGRFADGVTFACAMGVEERIARRLGPTVRLGLGAAN
Ga0307471_10181860423300032180Hardwood Forest SoilVDPDGLTFACAMSVEERVARRLGPTVRVGLGVANGVPDGERLVSFGIAG
Ga0370541_037022_3_1253300034680SoilMDADGLIFACAMGVEERIARRLGPTVRVGLGAANGIPGEGL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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