Metagenome / Metatranscriptome Family F060016

Overview

Basic Information

• Family ID: F060016
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 133
• Average Sequence Length: 38 residues
• Representative Sequence: MPHRCLLYYITDRSQFPGDERARRRALLAKIAEAARAGVD
• Number of Associated Samples: 125
• Number of Associated Scaffolds: 133

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 56.39 %
• % of genes near scaffold ends (potentially truncated): 100.00 %
• % of genes from short scaffolds (< 2000 bps): 92.48 %
• Associated GOLD sequencing projects: 123
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (96.992 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.278 % of family members)
• Environment Ontology (ENVO): Unclassified (30.075 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (43.609 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 42.65%
  β-sheet: 0.00%
  Coil/Unstructured: 57.35%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF03641	Lysine_decarbox	61.65
PF01435	Peptidase_M48	12.03
PF00837	T4_deiodinase	3.01
PF02517	Rce1-like	2.26
PF16491	Peptidase_M48_N	2.26
PF13181	TPR_8	1.50
PF00535	Glycos_transf_2	0.75
PF00152	tRNA-synt_2	0.75
PF00285	Citrate_synt	0.75
PF15780	ASH	0.75
PF00216	Bac_DNA_binding	0.75
PF00155	Aminotran_1_2	0.75
PF00466	Ribosomal_L10	0.75
PF13646	HEAT_2	0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	61.65
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	2.26
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	2.26
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.75
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.75
COG0244	Ribosomal protein L10	Translation, ribosomal structure and biogenesis [J]	0.75
COG0372	Citrate synthase	Energy production and conversion [C]	0.75
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.75
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.75
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.75

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.99 %
Unclassified	root	N/A	3.01 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.99 %
Unclassified	root	N/A	3.01 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.99 %
Unclassified	root	N/A	3.01 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.44 %
Unclassified	root	N/A	3.01 %

Level 5

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.29 %
Unclassified	root	N/A	3.01 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.50 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.29 %
Unclassified	root	N/A	3.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.54 %
Unclassified	root	N/A	3.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.75 %

Level 8

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.01 %
Unclassified	root	N/A	3.01 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Acidobacteriales bacterium 13_2_20CM_2_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5	0.75 %

Level 9

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.01 %
Unclassified	root	N/A	3.01 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Acidobacteriales bacterium 13_2_20CM_2_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5	0.75 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2170459017|G14TP7Y01CBOLF	Not Available	682
3300000567|JGI12270J11330_10155934	All Organisms → cellular organisms → Bacteria → Acidobacteria	849
3300001154|JGI12636J13339_1048425	All Organisms → cellular organisms → Bacteria	528
3300001593|JGI12635J15846_10866854	All Organisms → cellular organisms → Bacteria → Acidobacteria	516
3300005436|Ga0070713_100473224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1179
3300005591|Ga0070761_10021381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3605
3300005607|Ga0070740_10317256	All Organisms → cellular organisms → Bacteria → Acidobacteria	620
3300005616|Ga0068852_102597425	All Organisms → cellular organisms → Bacteria → Acidobacteria	526
3300006028|Ga0070717_11761802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	560
3300006086|Ga0075019_11106063	All Organisms → cellular organisms → Bacteria → Acidobacteria	514
3300006354|Ga0075021_10606233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	699
3300006914|Ga0075436_101315521	All Organisms → cellular organisms → Bacteria → Acidobacteria	547
3300007258|Ga0099793_10382972	All Organisms → cellular organisms → Bacteria	690
3300007788|Ga0099795_10447723	All Organisms → cellular organisms → Bacteria → Acidobacteria	594
3300009011|Ga0105251_10604728	All Organisms → cellular organisms → Bacteria → Acidobacteria	521
3300009093|Ga0105240_10135440	All Organisms → cellular organisms → Bacteria → Acidobacteria	2950
3300009521|Ga0116222_1500651	All Organisms → cellular organisms → Bacteria	532
3300009521|Ga0116222_1521642	All Organisms → cellular organisms → Bacteria → Acidobacteria	521
3300009524|Ga0116225_1501722	All Organisms → cellular organisms → Bacteria → Acidobacteria	539
3300009552|Ga0116138_1048570	All Organisms → cellular organisms → Bacteria → Acidobacteria	1221
3300009624|Ga0116105_1051024	All Organisms → cellular organisms → Bacteria → Acidobacteria	950
3300009640|Ga0116126_1130952	All Organisms → cellular organisms → Bacteria → Acidobacteria	859
3300009644|Ga0116121_1220722	All Organisms → cellular organisms → Bacteria → Acidobacteria	604
3300009646|Ga0116132_1117610	All Organisms → cellular organisms → Bacteria → Acidobacteria	814
3300010343|Ga0074044_10869422	Not Available	589
3300010361|Ga0126378_10523334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1301
3300010361|Ga0126378_10884590	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000
3300010366|Ga0126379_10374884	All Organisms → cellular organisms → Bacteria	1462
3300010373|Ga0134128_11862781	All Organisms → cellular organisms → Bacteria → Acidobacteria	662
3300010379|Ga0136449_102293662	All Organisms → cellular organisms → Bacteria	783
3300010397|Ga0134124_10546513	All Organisms → cellular organisms → Bacteria → Acidobacteria	1127
3300010398|Ga0126383_10418503	All Organisms → cellular organisms → Bacteria → Acidobacteria	1381
3300010862|Ga0126348_1219571	Not Available	668
3300011085|Ga0138581_1038363	All Organisms → cellular organisms → Bacteria → Acidobacteria	561
3300012096|Ga0137389_11813362	All Organisms → cellular organisms → Bacteria	506
3300012189|Ga0137388_11211804	All Organisms → cellular organisms → Bacteria → Acidobacteria	693
3300012359|Ga0137385_11156561	All Organisms → cellular organisms → Bacteria → Acidobacteria	635
3300012927|Ga0137416_10713633	All Organisms → cellular organisms → Bacteria → Acidobacteria	882
3300012929|Ga0137404_11043431	All Organisms → cellular organisms → Bacteria → Acidobacteria	749
3300014156|Ga0181518_10314820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	775
3300014156|Ga0181518_10386762	All Organisms → cellular organisms → Bacteria → Acidobacteria	679
3300014167|Ga0181528_10560221	All Organisms → cellular organisms → Bacteria	631
3300014167|Ga0181528_10607729	All Organisms → cellular organisms → Bacteria	606
3300014169|Ga0181531_10441416	All Organisms → cellular organisms → Bacteria → Acidobacteria	801
3300014201|Ga0181537_10383301	All Organisms → cellular organisms → Bacteria → Acidobacteria	965
3300014654|Ga0181525_10045336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2534
3300014654|Ga0181525_10320075	All Organisms → cellular organisms → Bacteria → Acidobacteria	848
3300014838|Ga0182030_10458099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1295
3300015357|Ga0134072_10436772	All Organisms → cellular organisms → Bacteria	524
3300017822|Ga0187802_10435186	All Organisms → cellular organisms → Bacteria	521
3300017823|Ga0187818_10038323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2057
3300017823|Ga0187818_10372945	All Organisms → cellular organisms → Bacteria → Acidobacteria	632
3300017925|Ga0187856_1157770	All Organisms → cellular organisms → Bacteria → Acidobacteria	850
3300017940|Ga0187853_10254598	All Organisms → cellular organisms → Bacteria → Acidobacteria	805
3300017941|Ga0187850_10037743	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2579
3300017943|Ga0187819_10091293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1818
3300017943|Ga0187819_10380185	Not Available	813
3300017948|Ga0187847_10007722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7423
3300017955|Ga0187817_10065643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	2252
3300017998|Ga0187870_1038434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2143
3300018007|Ga0187805_10184521	All Organisms → cellular organisms → Bacteria → Acidobacteria	952
3300018007|Ga0187805_10426584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5	617
3300018017|Ga0187872_10234403	All Organisms → cellular organisms → Bacteria → Acidobacteria	830
3300018023|Ga0187889_10472832	All Organisms → cellular organisms → Bacteria	536
3300018042|Ga0187871_10103215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1642
3300018047|Ga0187859_10556591	All Organisms → cellular organisms → Bacteria → Acidobacteria	643
3300018090|Ga0187770_11353014	All Organisms → cellular organisms → Bacteria	578
3300020170|Ga0179594_10173622	All Organisms → cellular organisms → Bacteria → Acidobacteria	803
3300020579|Ga0210407_10277723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1307
3300021170|Ga0210400_10712729	All Organisms → cellular organisms → Bacteria	825
3300021181|Ga0210388_10230118	All Organisms → cellular organisms → Bacteria → Acidobacteria	1625
3300021401|Ga0210393_11625330	All Organisms → cellular organisms → Bacteria → Acidobacteria	512
3300021405|Ga0210387_10179320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1829
3300021406|Ga0210386_11067477	All Organisms → cellular organisms → Bacteria	687
3300021407|Ga0210383_11482063	All Organisms → cellular organisms → Bacteria	562
3300021477|Ga0210398_10283585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1351
3300021478|Ga0210402_12026709	All Organisms → cellular organisms → Bacteria → Acidobacteria	501
3300021559|Ga0210409_10619768	All Organisms → cellular organisms → Bacteria → Acidobacteria	951
3300022717|Ga0242661_1050785	All Organisms → cellular organisms → Bacteria → Acidobacteria	774
3300025427|Ga0208077_1028888	All Organisms → cellular organisms → Bacteria → Acidobacteria	789
3300025480|Ga0208688_1086298	All Organisms → cellular organisms → Bacteria	618
3300025576|Ga0208820_1074749	All Organisms → cellular organisms → Bacteria → Acidobacteria	879
3300025581|Ga0208355_1050409	All Organisms → cellular organisms → Bacteria	1022
3300025906|Ga0207699_11399309	All Organisms → cellular organisms → Bacteria → Acidobacteria	517
3300025972|Ga0207668_10191376	All Organisms → cellular organisms → Bacteria → Acidobacteria	1621
3300026291|Ga0209890_10010284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3819
3300026294|Ga0209839_10115280	All Organisms → cellular organisms → Bacteria → Acidobacteria	908
3300026309|Ga0209055_1158209	All Organisms → cellular organisms → Bacteria → Acidobacteria	746
3300026371|Ga0257179_1033539	All Organisms → cellular organisms → Bacteria → Acidobacteria	634
3300026824|Ga0207723_112050	All Organisms → cellular organisms → Bacteria → Acidobacteria	675
3300027604|Ga0208324_1051457	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199
3300027680|Ga0207826_1137610	All Organisms → cellular organisms → Bacteria → Acidobacteria	668
3300027696|Ga0208696_1085164	All Organisms → cellular organisms → Bacteria → Acidobacteria	1062
3300027737|Ga0209038_10072653	All Organisms → cellular organisms → Bacteria	1032
3300027765|Ga0209073_10208686	All Organisms → cellular organisms → Bacteria	745
3300027773|Ga0209810_1187067	All Organisms → cellular organisms → Bacteria → Acidobacteria	833
3300027842|Ga0209580_10532753	All Organisms → cellular organisms → Bacteria → Acidobacteria	584
3300027867|Ga0209167_10656293	All Organisms → cellular organisms → Bacteria → Acidobacteria	574
3300027889|Ga0209380_10420390	All Organisms → cellular organisms → Bacteria → Acidobacteria	783
3300027894|Ga0209068_10453031	All Organisms → cellular organisms → Bacteria → Acidobacteria	736
3300027986|Ga0209168_10638962	All Organisms → cellular organisms → Bacteria → Acidobacteria	507
3300028023|Ga0265357_1006520	All Organisms → cellular organisms → Bacteria → Acidobacteria	1106
3300028792|Ga0307504_10150523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789
3300028795|Ga0302227_10131665	All Organisms → cellular organisms → Bacteria	1003
3300028873|Ga0302197_10488425	All Organisms → cellular organisms → Bacteria → Acidobacteria	538
3300029914|Ga0311359_11035912	All Organisms → cellular organisms → Bacteria	550
3300029917|Ga0311326_10352298	All Organisms → cellular organisms → Bacteria → Acidobacteria	738
3300029945|Ga0311330_10792195	All Organisms → cellular organisms → Bacteria	719
3300030020|Ga0311344_10397791	All Organisms → cellular organisms → Bacteria → Acidobacteria	1268
3300030054|Ga0302182_10247450	All Organisms → cellular organisms → Bacteria	757
3300030057|Ga0302176_10036118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1883
3300030503|Ga0311370_11015984	All Organisms → cellular organisms → Bacteria → Acidobacteria	923
3300030509|Ga0302183_10042372	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1822
3300030617|Ga0311356_10664330	All Organisms → cellular organisms → Bacteria → Acidobacteria	1002
3300030706|Ga0310039_10272412	All Organisms → cellular organisms → Bacteria → Acidobacteria	647
3300030878|Ga0265770_1159087	All Organisms → cellular organisms → Bacteria	501
3300030991|Ga0073994_12416115	All Organisms → cellular organisms → Bacteria	803
3300031040|Ga0265754_1029574	All Organisms → cellular organisms → Bacteria	557
3300031122|Ga0170822_10446110	All Organisms → cellular organisms → Bacteria → Acidobacteria	626
3300031234|Ga0302325_12340979	All Organisms → cellular organisms → Bacteria	644
3300031236|Ga0302324_103420257	All Organisms → cellular organisms → Bacteria → Acidobacteria	517
3300031239|Ga0265328_10077638	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223
3300031344|Ga0265316_10000552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	42074
3300031754|Ga0307475_10373109	All Organisms → cellular organisms → Bacteria → Acidobacteria	1146
3300031820|Ga0307473_10278021	All Organisms → cellular organisms → Bacteria	1042
3300031833|Ga0310917_10237763	All Organisms → cellular organisms → Bacteria → Acidobacteria	1224
3300031902|Ga0302322_103590517	All Organisms → cellular organisms → Bacteria → Acidobacteria	531
3300031942|Ga0310916_11696639	All Organisms → cellular organisms → Bacteria → Acidobacteria	511
3300032180|Ga0307471_100209010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1962
3300032805|Ga0335078_11761377	All Organisms → cellular organisms → Bacteria → Acidobacteria	676
3300033402|Ga0326728_10438033	All Organisms → cellular organisms → Bacteria	1094
3300033561|Ga0371490_1077717	All Organisms → cellular organisms → Bacteria	917
3300034124|Ga0370483_0068670	All Organisms → cellular organisms → Bacteria → Acidobacteria	1139

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.23%
Host-Associated	Host-Associated	6.02%
Engineered	Engineered	0.75%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.17%
Aquatic	Environmental → Aquatic	27.07%
Plants	Host-Associated → Plants	6.02%
Solid Waste	Engineered → Solid Waste	0.75%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.14%
Freshwater	Environmental → Aquatic → Freshwater	24.81%
Peat	Environmental → Terrestrial → Peat	12.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Sediment	Environmental → Aquatic → Sediment	2.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%
Grass	Engineered → Solid Waste → Grass	0.75%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.03%
Loam	Environmental → Terrestrial → Soil → Loam	6.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.02%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.26%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.26%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.75%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.75%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.28%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.02%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.02%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.02%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.01%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.50%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.50%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.75%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.75%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459017	Litter degradation ZMR4	Engineered
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300011085	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental
3300029914	III_Bog_E2 coassembly	Environmental
3300029917	I_Bog_E1 coassembly	Environmental
3300029945	I_Bog_N2 coassembly	Environmental
3300030020	II_Bog_N1 coassembly	Environmental
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental
3300030503	III_Palsa_E3 coassembly	Environmental
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental
3300030617	II_Palsa_N2 coassembly	Environmental
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_03691150	2170459017	Switchgrass, Maize And Mischanthus Litter	MLLCYITDRRAFPGTDTDQRHALLRKIAEAARAGIDYIQ
JGI12270J11330_101559342	3300000567	Peatlands Soil	MAESCLLYYITDRSAFPGDEATRRRHLLEKIAEAAR
JGI12636J13339_10484251	3300001154	Forest Soil	MADRCLLYYITDRSQFRGDEHARRHALLAKVAEAARA
JGI12635J15846_108668542	3300001593	Forest Soil	MADSSLLYYITDRKAFPGGERARRLRLLDKIAEAAR
Ga0070713_1004732241	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAESRLLYYITDRTAFSGDELERRRRLLEKISEAARAGVDY
Ga0070761_100213811	3300005591	Soil	MAGRCLLCYITDRSQFGGDDRSRRRSLLAKIAEAARAGIDY
Ga0070740_103172561	3300005607	Surface Soil	MAKSCVLYYITDRTAFAASEATRRKLLLEKIAEAV
Ga0068852_1025974251	3300005616	Corn Rhizosphere	VGTGLLLLYYITDRKQFPGSAAEQRERLLAKVAEA
Ga0070717_117618021	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MASCLLYYITDRSAFPGDESSRRHQLLAKISEAAQAGVDY
Ga0075019_111060631	3300006086	Watersheds	MPGTLLYYITDRKAYGVDERTRHRRLLEKIEEAASHN
Ga0075021_106062331	3300006354	Watersheds	MAAGCRLYYITDRNAFPGDEFAKRRRLLEKVAEAARAGVD
Ga0075436_1013155211	3300006914	Populus Rhizosphere	MAESCLLYYITDRTAFPGDELARRRRLLEKISEAA
Ga0099793_103829722	3300007258	Vadose Zone Soil	MASRCLLYYITDRSQFRGDERARRHALLAKVADAARASVD
Ga0099795_104477231	3300007788	Vadose Zone Soil	MAAACLFYYITDRTQFQGDEPARRRALLSKIAEAARAGV
Ga0105251_106047281	3300009011	Switchgrass Rhizosphere	MLLYYITDRSQFSGDADSRRAQLLATVSHAARCGVD
Ga0105240_101354404	3300009093	Corn Rhizosphere	MLLYYITDRSQFSGDADSRRAQLLATVSHAARCGVDYI
Ga0116222_15006511	3300009521	Peatlands Soil	MAGRCLLYYITDRSQFRGDEHARRRALLAKIVEAAC
Ga0116222_15216422	3300009521	Peatlands Soil	LLLFYITDRTQFLGDENARQRALLAKIAEATRCGVELVQLR
Ga0116225_15017221	3300009524	Peatlands Soil	MAERSLLYYITDRAAFPGDARTRRLRLLDKISEAASHGVDYIQ
Ga0116138_10485701	3300009552	Peatland	MADRCLLYYITDRSQFPGDERTRRRVLLATVAEAARARVDYIQ
Ga0116105_10510241	3300009624	Peatland	MADRCLLYYITDRTQFPGDAKIRRRSLLAKVTDAVNAGVD
Ga0116126_11309522	3300009640	Peatland	MAGSCFLYYITDRAVFPGDESARRRRLLEKIAEAARAG
Ga0116121_12207221	3300009644	Peatland	MADGYLLYYITDRKAFPGNERARRFRLLDKIAEAANAGV
Ga0116132_11176102	3300009646	Peatland	MADRCLLYYITDRSQFPGDERTRRRVLLATVAEAARA
Ga0074044_108694222	3300010343	Bog Forest Soil	MAQGCLLYYITDRSAFPGDESSRRRRLLEKIAEAAR
Ga0126378_105233343	3300010361	Tropical Forest Soil	MAEGCLLYYITDRTAFGTDETTRRRRLLEKISESARAGV
Ga0126378_108845903	3300010361	Tropical Forest Soil	MANDERLASSRCILYYITDRAAFASDEPTRRRRLLEKIAE
Ga0126379_103748841	3300010366	Tropical Forest Soil	MGDRCLLYYITDRTHFPGGETERRRALLARIAEAAQAGVD
Ga0134128_118627811	3300010373	Terrestrial Soil	LLLYYITDRAHFSGTESQRQDRLLKKISEAANAGV
Ga0136449_1022936622	3300010379	Peatlands Soil	MAARCLLYYITDRSQFPGDEPARRRALLDKIAEAANAGV
Ga0134124_105465132	3300010397	Terrestrial Soil	MSVLLYYITDRSQFPGDESARRAALLAKIAEAGSADVDY
Ga0126383_104185031	3300010398	Tropical Forest Soil	MPRRQLLYYITDRTVFATDEPTRYRRLLDKIAEAV
Ga0126348_12195711	3300010862	Boreal Forest Soil	LILYYITDRKQFRGNADEQQRRLLAKIAEAAYAGVTY
Ga0138581_10383631	3300011085	Peatlands Soil	LLLFYITDRTQFLGGENARQRALLAKIAEATRCGVELIQ
Ga0137389_118133621	3300012096	Vadose Zone Soil	MADRCLLYYITDRSQFPGDESARRHALLAKVAEAA
Ga0137388_112118042	3300012189	Vadose Zone Soil	MADSCLLYYITDRRAFSGNEPTRRQRLLDKIAEAASHGV
Ga0137385_111565612	3300012359	Vadose Zone Soil	MADGCLLYYITDRSQFHGDEAARRRGLLAKIAEAAQAG
Ga0137416_107136331	3300012927	Vadose Zone Soil	MLLYYITDRTQFSGGEIARRSALLAKVRECARAGV
Ga0137404_110434312	3300012929	Vadose Zone Soil	MLLYYITDCTQFPGNESARRSALLAKVRECALAGVDY
Ga0181518_103148202	3300014156	Bog	MADRCLLYYITDRSQFRGDERARRRDLLAKVAEAARARVDCIQ
Ga0181518_103867622	3300014156	Bog	MAESCLLCYITDRAAFPGDESARGRRLLEKIAEAARAGVD
Ga0181528_105602212	3300014167	Bog	MTNRCQLYYITDRTQFRGDEHERRRALLEKITEAAHSRV
Ga0181528_106077291	3300014167	Bog	MASGCLLYYITDRSQFRGGDHERRKLLIAKVGEAARAQVD
Ga0181531_104414163	3300014169	Bog	MADRCLLYYITDRTQFPGDAKTRRRSLLAKVTDAVNAGVDYIQLRE
Ga0181537_103833012	3300014201	Bog	MAKRCFLYYITDRSPFAPDEPTRRRRLIEKISEAARA
Ga0181525_100453361	3300014654	Bog	MADRCLLYYINDRTQFPGDESARRRALLAKIDEAAHAGVDYI
Ga0181525_103200752	3300014654	Bog	MADSLVLYYITDRKAFPGDERTRRLRLLDKIAEAA
Ga0182030_104580991	3300014838	Bog	MADRCLLYYITDRSQFHGDEDTRRRALLAKVAEAARAGVDYIQ
Ga0134072_104367722	3300015357	Grasslands Soil	MLLYYITDRTQFPGPPTRQRERLLSTAVAAARAGVDLIQVREK
Ga0187802_104351861	3300017822	Freshwater Sediment	MPQSCLLYYITDRTAFRVEESARRRRLLDKIAEAA
Ga0187818_100383231	3300017823	Freshwater Sediment	MADRCLLYYITDRWQFRGDESARRRALLAKVAEAAH
Ga0187818_103729452	3300017823	Freshwater Sediment	LLLYYITDRTQFPGDENARQRALLAKIAEATRGGVDLIQLR
Ga0187856_11577703	3300017925	Peatland	MADRCLLYYITDRSQFPGDERTRRRVLLATVAEAARARVDYI
Ga0187853_102545982	3300017940	Peatland	MPEPTLLYYITDRTAFPGDERARRLRLLDKIAEPASAGVNYI
Ga0187850_100377431	3300017941	Peatland	MADRCLLYYITGRRQFSGDEHERRRALLAKIAEATRAG
Ga0187819_100912933	3300017943	Freshwater Sediment	MADRCLLYYITDRSQFRGDERTRRRDLLAKVAEAAR
Ga0187819_103801852	3300017943	Freshwater Sediment	MNFDSTLERMPDRCRLYYITDRSAFPGAEDARRRRLLEKIAEAARAGV
Ga0187847_100077227	3300017948	Peatland	MADRCLLYYITDRTQFRGDAETRRRSLLAKVADAVNAGVDYIQL
Ga0187817_100656431	3300017955	Freshwater Sediment	MADRCLLYYITDRSQFRGDERTRRRDLLAKVAEAARAC
Ga0187870_10384341	3300017998	Peatland	MADRCLLYYITDRSQFPGDERTRRRVLLATVAEAAR
Ga0187805_101845212	3300018007	Freshwater Sediment	MSERCLLYYITDRTAFAPDEPTRRKRLLEKIAEAA
Ga0187805_104265842	3300018007	Freshwater Sediment	MSTCLLNYITDRCAFPGDEPARRRALLGKIAEAASCGVHYIQL
Ga0187872_102344032	3300018017	Peatland	MPESTLLYYITDRTGFPGDERARRLRLLDKIAEAA
Ga0187889_104728322	3300018023	Peatland	MLLYYITDRTQFRGDEPTRRRLLLAKIAEAASAGVDYI
Ga0187871_101032151	3300018042	Peatland	MADRCLLYYITDRSQFRGDEQTRRRDLLAKGADAARAGVNYI
Ga0187859_105565911	3300018047	Peatland	MPARCLLYYITDRTAFPGDELSRRRHLLEKISGAARAG
Ga0187770_113530141	3300018090	Tropical Peatland	MPRCLLYCITDRTAFPGDDPARRRRLLEKIAEAARAGVD
Ga0179594_101736221	3300020170	Vadose Zone Soil	MQLYYITDRSGFPGDETARRRQLLKKIIEAARAGID
Ga0210407_102777233	3300020579	Soil	MGKRPLLYYITDRNAFPGNELERRRRLLHKITEAAKAGVDYIQ
Ga0210400_107127291	3300021170	Soil	MPHRCLLYYITDRSQFPGDERARRRALLAKIAGAARAGVDY
Ga0210388_102301181	3300021181	Soil	MADRCLLYYITDRSQFRGDESTRRRDLLAKVSEAAR
Ga0210393_116253301	3300021401	Soil	MAKSCLLYYITDRTAFPGDELSRRRRLLKKISEAARASV
Ga0210387_101793203	3300021405	Soil	MANRCLLYYITERTQFRGDEAQRQRALLSKIADAARAGV
Ga0210386_110674772	3300021406	Soil	MAQRCLLYYITDRTQFPGDEHARRRALLAKIAEAAHAG
Ga0210383_114820632	3300021407	Soil	MPHRCLLYYRTDRSQFPGEERARRRALLAKIAEAA
Ga0210398_102835851	3300021477	Soil	MATRCLLYYITDRTAFPGDEPCRRRRLLEKITEAASAEVDYIQL
Ga0210402_120267091	3300021478	Soil	MPRVLLYYITDRAAFSGDELARRQTLLAKISEAARAG
Ga0210409_106197682	3300021559	Soil	LLLLYITNRVQFTGDESARQGALLAKIAEAARCGVDLIQ
Ga0242661_10507852	3300022717	Soil	MAEGCLLYYITDRTAFAADEPTRRRRLLDKIAEAA
Ga0208077_10288881	3300025427	Arctic Peat Soil	MPRCLLYYITDRTAFPGDEPTRRLRLLEKIQEAARAGVD
Ga0208688_10862981	3300025480	Peatland	MAGSCFLYYITDRAVFPGDESARRRRLLEKIAEAARAGVDY
Ga0208820_10747492	3300025576	Peatland	MAGSCFLYYITDRSQFRGDEYARRRALLARIAEAASVGIDYIQL
Ga0208355_10504092	3300025581	Arctic Peat Soil	MANRCLLYYITDRNQFRGDEPARRRTLLAKVAEAA
Ga0207699_113993092	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAESCLLYYITDRTAFPGDELARRRQLLEKISEAAYA
Ga0207668_101913764	3300025972	Switchgrass Rhizosphere	MLLYYITDRSQFSGDADSRRAQLLATVSHAARCGVDYIQ
Ga0209890_100102841	3300026291	Soil	MSSRCLLYYLTDRTAFPGDEPSRRRRLLEKIREASRAGVD
Ga0209839_101152801	3300026294	Soil	MAMPDRCLLYYITDRSQFHGDESSRRSELLAKVAEAA
Ga0209055_11582091	3300026309	Soil	LLLCYITDRSQFPGNESARRGRLLERITEAACYGVDFI
Ga0257179_10335391	3300026371	Soil	LLLCYITDRSQFSGDESARRRRLLEKIAEAARCGV
Ga0207723_1120502	3300026824	Tropical Forest Soil	MAESCLLYYITNRTAFAADEPSRRRRLLEKIREAVCAEIDYI
Ga0208324_10514571	3300027604	Peatlands Soil	LILLYITDRIQFPGDESARHGALLAKIAEATRCGVDLIQL
Ga0207826_11376102	3300027680	Tropical Forest Soil	MPAPLLYYITDRSAFAGDEAARRRAVIDRIVQAAKAGIEYI
Ga0208696_10851641	3300027696	Peatlands Soil	VLLYYITDRKQFPGPEPRRRELLLARIAEAARAGVDYIQ
Ga0209038_100726532	3300027737	Bog Forest Soil	MADRCLLYYITDRTQFRGDEAVRRRALLSKIADAARAG
Ga0209073_102086861	3300027765	Agricultural Soil	MISYYITDRKQFPGTAAEQRARLLAKIAEASRAGVD
Ga0209810_11870671	3300027773	Surface Soil	MAESCLLYYITDRTQFAGDELSRRRHLLDKINEAARAG
Ga0209580_105327531	3300027842	Surface Soil	LLLFYITDRTQFPGDEDSRQRALLSKIAEATRCGVDL
Ga0209167_106562931	3300027867	Surface Soil	MSARCLLYYITDRTAFHGDERTRRRRLLEKITEAARAGV
Ga0209380_104203902	3300027889	Soil	MPTRGLLYYITDRTAFADDEPTRRRRLLEKIAEAAR
Ga0209068_104530311	3300027894	Watersheds	MPRCLLYYITDRSAFPGDEPARRRCLLERIREAALAGIDYIQL
Ga0209168_106389621	3300027986	Surface Soil	MAASLLYYITDRTAFPGDELSRRRRLLEKIGEAARANIDYI
Ga0265357_10065202	3300028023	Rhizosphere	LILFYITDRVQFAGDESARQGALLAKIAEAARCGVDLI
Ga0307504_101505231	3300028792	Soil	MADRCLLYYITDRSQFPGGEPARRSALLAKIAEATCC
Ga0302227_101316651	3300028795	Palsa	MAARCLLCYITDRTQFRGDEPTRRRELLLKIAEAA
Ga0302197_104884252	3300028873	Bog	MAETCLLYYITDRTAFPGDEAMRCRRLLEKIAEAARH
Ga0311359_110359121	3300029914	Bog	MANRCQLYYVTDRTQFRGDEQERRRALLQKITEAAHAGVD
Ga0311326_103522981	3300029917	Bog	MAARCLLYYVTDRAAFPGDESARRQRLLEKISEAASAG
Ga0311330_107921951	3300029945	Bog	MANRCQLYYVTDRTQFRGDEQERRRALLQKITEAAHA
Ga0311344_103977911	3300030020	Bog	MADSSLLYYITDRKAFPCDERARRLRLLEKIAEAASCG
Ga0302182_102474501	3300030054	Palsa	MAARCLLCYITDRTQFRGDEPTRRRELLLKIAEAAKAGVD
Ga0302176_100361184	3300030057	Palsa	MAQNCLLYYITSLAGFPGDERARRFRLLDKIEEAAVCGVDCI
Ga0311370_110159841	3300030503	Palsa	LGLLLYYITDRKSFAADEPTRRRRLLEKIAEATAA
Ga0302183_100423721	3300030509	Palsa	MAQNCLLYYITSLAGFPGDERARRFRLLDKIEEAA
Ga0311356_106643301	3300030617	Palsa	MADRALLYYITDRAAFRGDERTRRLRLLDKIAEAASE
Ga0310039_102724121	3300030706	Peatlands Soil	LLLFYITDRTQFLGDENARQRALLAKIAEATRCGVELVQL
Ga0265770_11590871	3300030878	Soil	LLLYYITDRAAFPGDESTRRRRLLEKIAEAATEGVHYIQ
Ga0073994_124161152	3300030991	Soil	MPHRCLLYYITDRSQFPGDERARRRALLAKIAEAARAGVD
Ga0265754_10295741	3300031040	Soil	MAQSCLLYYITDRTQFPGDERARRRALLDKIAEAARA
Ga0170822_104461102	3300031122	Forest Soil	MAHSCLLYYITDRTAFSGDELSRRRRLLKKIAEAA
Ga0302325_123409791	3300031234	Palsa	MADRCLLYYITDRSQFRGDEQARRRALLAKIAEAAAA
Ga0302324_1034202571	3300031236	Palsa	MADSCILYYITDRTVFPGDERTRRDRLLDKIAEAASAGIDYI
Ga0265328_100776381	3300031239	Rhizosphere	MPPRCFLYYITNRTYLPGDERTRRRRLLQKIQEAAR
Ga0265316_100005521	3300031344	Rhizosphere	MADRCLLYYITDRSQFRGDESDRRRALLAKVSDAAS
Ga0307475_103731091	3300031754	Hardwood Forest Soil	MAEGCLLYYITDRTAFAADEPTRRRRLLDKIAEAAGAGV
Ga0307473_102780211	3300031820	Hardwood Forest Soil	MADRCLLYYITDRSQFLGDERARRRALLAKVAEAARAGLDY
Ga0310917_102377632	3300031833	Soil	MPPLLYYITDRTAFPGDELSRRRQLLAKIREAAEAGIDYIQ
Ga0302322_1035905172	3300031902	Fen	MVMGGGCLLYYITDRAQFPGDESSRRTALLGKIAEVARAGVDY
Ga0310916_116966391	3300031942	Soil	LLLYYITDRTQFAEDENTRRQVLLAKIADAARWGVDFIQL
Ga0307471_1002090104	3300032180	Hardwood Forest Soil	MAESCLLYYITDRKALAEDEPSRHRRLLDKIAEAACAEVD
Ga0335078_117613771	3300032805	Soil	MPLICYITDRSAFPGDEAARLKMLLEKIRAAARAGVDFIQ
Ga0326728_104380331	3300033402	Peat Soil	MLMADRCLLYYVTDRSQFPGDEHARRRALLAKIAEAASVGVNYLQLR
Ga0371490_10777171	3300033561	Peat Soil	MAEGCQLYYITNRAEFPGDELTCRRALLAKIAEAARAEVDYIQL
Ga0370483_0068670_3_116	3300034124	Untreated Peat Soil	MAESCLLYYITDRKAFAGDERTRCLRLLDKVAEAASCG