Metagenome Family F060006

Basic Information
Family ID	F060006
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	87 residues
Representative Sequence	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDM
Number of Associated Samples	112
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.73 %
% of genes near scaffold ends (potentially truncated)	94.74 %
% of genes from short scaffolds (< 2000 bps)	91.73 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (54.887 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (8.271 % of family members)
Environment Ontology (ENVO)	Unclassified (43.609 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.165 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.59% β-sheet: 19.54% Coil/Unstructured: 52.87%
Feature Viewer

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Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF02325	YGGT	3.76
PF00072	Response_reg	2.26
PF11066	DUF2867	2.26
PF04542	Sigma70_r2	1.50
PF13545	HTH_Crp_2	1.50
PF13620	CarboxypepD_reg	1.50
PF00115	COX1	1.50
PF10282	Lactonase	1.50
PF13946	DUF4214	1.50
PF00561	Abhydrolase_1	1.50
PF13148	DUF3987	0.75
PF07883	Cupin_2	0.75
PF02082	Rrf2	0.75
PF14534	DUF4440	0.75
PF13460	NAD_binding_10	0.75
PF13360	PQQ_2	0.75
PF13090	PP_kinase_C	0.75
PF02698	DUF218	0.75
PF01223	Endonuclease_NS	0.75
PF00534	Glycos_transf_1	0.75
PF13561	adh_short_C2	0.75
PF00106	adh_short	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	3.76
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.50
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.50
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.50
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.50
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.75
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.75
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.75
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.75
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	0.75
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.75
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.75
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.75
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.75
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.75
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
All Organisms	root	All Organisms	45.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
cellular organisms	root	All Organisms → cellular organisms	45.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.01 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	5.26 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.50 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.75 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	3.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.26 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.50 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.75 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.75 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.26 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.50 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.75 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.75 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.75 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.75 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.26 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.50 %
Pseudogulbenkiania	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania	0.75 %
Asticcacaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis	0.75 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.75 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.75 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.26 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.50 %
Pseudogulbenkiania ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → Pseudogulbenkiania ferrooxidans	0.75 %
unclassified Asticcacaulis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → unclassified Asticcacaulis	0.75 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.75 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.75 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.26 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.50 %
Asticcacaulis sp. YBE204	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → unclassified Asticcacaulis → Asticcacaulis sp. YBE204	0.75 %
Pseudogulbenkiania ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → Pseudogulbenkiania ferrooxidans	0.75 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.75 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.75 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725003\|GPWSG_F5G3JLY01AOIOM	Not Available	506	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig106393	Not Available	544	Open in IMG/M
2170459017\|G14TP7Y01APD6G	Not Available	627	Open in IMG/M
3300000559\|F14TC_101039023	Not Available	628	Open in IMG/M
3300000789\|JGI1027J11758_12734139	All Organisms → cellular organisms → Bacteria → Acidobacteria	1238	Open in IMG/M
3300000890\|JGI11643J12802_11397857	Not Available	688	Open in IMG/M
3300004114\|Ga0062593_102301866	Not Available	606	Open in IMG/M
3300004156\|Ga0062589_100566813	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300004643\|Ga0062591_102563185	Not Available	537	Open in IMG/M
3300005289\|Ga0065704_10803431	Not Available	524	Open in IMG/M
3300005290\|Ga0065712_10484661	Not Available	643	Open in IMG/M
3300005294\|Ga0065705_10136598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2257	Open in IMG/M
3300005294\|Ga0065705_10518307	Not Available	763	Open in IMG/M
3300005331\|Ga0070670_100000276	All Organisms → cellular organisms → Bacteria	45006	Open in IMG/M
3300005331\|Ga0070670_100820713	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005331\|Ga0070670_101270713	Not Available	673	Open in IMG/M
3300005331\|Ga0070670_101491259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → unclassified Asticcacaulis → Asticcacaulis sp. YBE204	621	Open in IMG/M
3300005333\|Ga0070677_10937494	Not Available	502	Open in IMG/M
3300005336\|Ga0070680_100244335	Not Available	1517	Open in IMG/M
3300005353\|Ga0070669_100601591	Not Available	921	Open in IMG/M
3300005364\|Ga0070673_101110911	Not Available	739	Open in IMG/M
3300005364\|Ga0070673_102187555	Not Available	526	Open in IMG/M
3300005366\|Ga0070659_100320580	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300005440\|Ga0070705_101064353	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300005444\|Ga0070694_101358290	Not Available	599	Open in IMG/M
3300005444\|Ga0070694_101394538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	591	Open in IMG/M
3300005457\|Ga0070662_101103760	Not Available	681	Open in IMG/M
3300005467\|Ga0070706_101339142	Not Available	656	Open in IMG/M
3300005518\|Ga0070699_100744863	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005539\|Ga0068853_100961297	Not Available	821	Open in IMG/M
3300005543\|Ga0070672_100205388	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300005544\|Ga0070686_101511466	Not Available	566	Open in IMG/M
3300005544\|Ga0070686_101584998	Not Available	554	Open in IMG/M
3300005545\|Ga0070695_100263005	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300005545\|Ga0070695_101758840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → Pseudogulbenkiania ferrooxidans	519	Open in IMG/M
3300005545\|Ga0070695_101844622	Not Available	508	Open in IMG/M
3300005546\|Ga0070696_100039784	All Organisms → cellular organisms → Bacteria	3247	Open in IMG/M
3300005547\|Ga0070693_100407732	Not Available	944	Open in IMG/M
3300005549\|Ga0070704_101583805	Not Available	604	Open in IMG/M
3300005578\|Ga0068854_101411077	Not Available	630	Open in IMG/M
3300005617\|Ga0068859_103080880	Not Available	508	Open in IMG/M
3300005718\|Ga0068866_10381262	Not Available	904	Open in IMG/M
3300005840\|Ga0068870_10891263	Not Available	628	Open in IMG/M
3300005841\|Ga0068863_101679847	Not Available	644	Open in IMG/M
3300005843\|Ga0068860_101896886	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300006358\|Ga0068871_100689550	Not Available	935	Open in IMG/M
3300006806\|Ga0079220_11977739	Not Available	519	Open in IMG/M
3300006852\|Ga0075433_11174447	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300006871\|Ga0075434_100479045	All Organisms → cellular organisms → Bacteria → Acidobacteria	1266	Open in IMG/M
3300006871\|Ga0075434_102600557	Not Available	507	Open in IMG/M
3300006903\|Ga0075426_11305887	Not Available	551	Open in IMG/M
3300007004\|Ga0079218_10166674	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300009092\|Ga0105250_10511726	Not Available	546	Open in IMG/M
3300009092\|Ga0105250_10617895	Not Available	504	Open in IMG/M
3300009100\|Ga0075418_11117601	Not Available	853	Open in IMG/M
3300009148\|Ga0105243_12007001	Not Available	613	Open in IMG/M
3300009162\|Ga0075423_10237379	All Organisms → cellular organisms → Bacteria → Acidobacteria	1910	Open in IMG/M
3300009174\|Ga0105241_11460585	Not Available	657	Open in IMG/M
3300009177\|Ga0105248_10510799	All Organisms → cellular organisms → Bacteria → Acidobacteria	1355	Open in IMG/M
3300009553\|Ga0105249_10041374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4189	Open in IMG/M
3300009553\|Ga0105249_13446022	Not Available	509	Open in IMG/M
3300010039\|Ga0126309_10290880	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300010039\|Ga0126309_10792592	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300010041\|Ga0126312_10294257	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300010166\|Ga0126306_10265165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300010373\|Ga0134128_10705402	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300010399\|Ga0134127_12200350	Not Available	630	Open in IMG/M
3300010401\|Ga0134121_10361857	All Organisms → cellular organisms → Bacteria → Acidobacteria	1301	Open in IMG/M
3300010403\|Ga0134123_13018766	Not Available	539	Open in IMG/M
3300010403\|Ga0134123_13552176	Not Available	505	Open in IMG/M
3300011119\|Ga0105246_11836692	Not Available	580	Open in IMG/M
3300011269\|Ga0137392_10446881	All Organisms → cellular organisms → Bacteria → Acidobacteria	1074	Open in IMG/M
3300011993\|Ga0120182_1017241	Not Available	613	Open in IMG/M
3300012022\|Ga0120191_10061390	Not Available	685	Open in IMG/M
3300012499\|Ga0157350_1018552	Not Available	675	Open in IMG/M
3300012896\|Ga0157303_10083966	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	737	Open in IMG/M
3300012951\|Ga0164300_10362119	Not Available	783	Open in IMG/M
3300012957\|Ga0164303_11139993	Not Available	566	Open in IMG/M
3300012958\|Ga0164299_11240550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	567	Open in IMG/M
3300013296\|Ga0157374_11141859	Not Available	800	Open in IMG/M
3300013297\|Ga0157378_11130529	Not Available	821	Open in IMG/M
3300013306\|Ga0163162_13405989	Not Available	507	Open in IMG/M
3300013307\|Ga0157372_10009909	All Organisms → cellular organisms → Bacteria	10134	Open in IMG/M
3300013307\|Ga0157372_10234442	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2128	Open in IMG/M
3300013308\|Ga0157375_10097186	All Organisms → cellular organisms → Bacteria → Acidobacteria	3019	Open in IMG/M
3300014325\|Ga0163163_10105404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2845	Open in IMG/M
3300014325\|Ga0163163_12658897	Not Available	558	Open in IMG/M
3300014326\|Ga0157380_10912325	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300014326\|Ga0157380_11339160	Not Available	764	Open in IMG/M
3300014488\|Ga0182001_10506684	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300015372\|Ga0132256_102210443	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300015373\|Ga0132257_101163784	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300018466\|Ga0190268_11636570	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300018468\|Ga0066662_11460439	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300018469\|Ga0190270_11339418	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300018476\|Ga0190274_12962033	Not Available	570	Open in IMG/M
3300021445\|Ga0182009_10266853	Not Available	854	Open in IMG/M
3300025227\|Ga0207638_1000774	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300025904\|Ga0207647_10130984	Not Available	1474	Open in IMG/M
3300025904\|Ga0207647_10558569	Not Available	634	Open in IMG/M
3300025911\|Ga0207654_10688566	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300025917\|Ga0207660_11321780	Not Available	585	Open in IMG/M
3300025919\|Ga0207657_11194798	Not Available	578	Open in IMG/M
3300025926\|Ga0207659_10294799	Not Available	1330	Open in IMG/M
3300025930\|Ga0207701_10253952	Not Available	1534	Open in IMG/M
3300025936\|Ga0207670_11613948	Not Available	552	Open in IMG/M
3300025937\|Ga0207669_10919676	Not Available	732	Open in IMG/M
3300025941\|Ga0207711_11222223	Not Available	693	Open in IMG/M
3300025942\|Ga0207689_10643300	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300025972\|Ga0207668_11388282	Not Available	633	Open in IMG/M
3300025981\|Ga0207640_10736819	Not Available	848	Open in IMG/M
3300026089\|Ga0207648_10374490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1286	Open in IMG/M
3300026095\|Ga0207676_10379592	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300026686\|Ga0208213_103462	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300027886\|Ga0209486_10041674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2262	Open in IMG/M
3300028380\|Ga0268265_10648051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300028381\|Ga0268264_10030613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	4411	Open in IMG/M
3300031740\|Ga0307468_100907654	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031847\|Ga0310907_10087337	Not Available	1314	Open in IMG/M
3300032075\|Ga0310890_10133495	Not Available	1616	Open in IMG/M
3300032075\|Ga0310890_11358147	Not Available	582	Open in IMG/M
3300032122\|Ga0310895_10528496	Not Available	596	Open in IMG/M
3300032211\|Ga0310896_10627085	Not Available	602	Open in IMG/M
3300032421\|Ga0310812_10077229	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300034002\|Ga0334920_024044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1076	Open in IMG/M
3300034007\|Ga0334936_040356	All Organisms → cellular organisms → Bacteria → Acidobacteria	969	Open in IMG/M
3300034009\|Ga0334944_018574	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300034009\|Ga0334944_111808	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300034026\|Ga0334946_015356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300034137\|Ga0334943_045477	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300034174\|Ga0334932_042897	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300034221\|Ga0334937_084448	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.88%
Host-Associated	Host-Associated	47.37%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.88%
Plants	Host-Associated → Plants	47.37%
Solid Waste	Engineered → Solid Waste	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.79%
Roots	Host-Associated → Plants → Roots	2.26%
Grass	Engineered → Solid Waste → Grass	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.29%
Loam	Environmental → Terrestrial → Soil → Loam	13.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.03%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.26%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.26%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.51%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.76%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.01%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.26%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.02%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.02%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.51%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.01%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	3.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.26%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	2.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.75%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725003	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011993	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep1	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025227	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in- M7 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026686	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1097 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300034002	Biocrust microbial communities from Mojave Desert, California, United States - 16HMC	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034137	Biocrust microbial communities from Mojave Desert, California, United States - 39SMC	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWSG_00305620	2067725003	Soil	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERMLR
KansclcFeb2_05545700	2124908045	Soil	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDI
4ZMR_01661090	2170459017	Switchgrass, Maize And Mischanthus Litter	VSIDFHDITIIANPEQAQVRDGSRRHSKKFPFQLSAAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLANNLEADMKVANEQYRERLLVQKAKDSKRVTRGRNGSVRMIMPR
F14TC_1010390231	3300000559	Soil	MSIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVARFNREWAMRTVSNRAASIHGDILVLECAIEELPLLAENLEVDMIAANQQYRERLLRQK
JGI1027J11758_127341394	3300000789	Soil	MPIDFQAITIIANPEQAQVRXGSRPHSXKFPXRLSAAPTPEWVALFNREWSMRTVPDRAASVHGDILLLECAIEELPLLAENLEV
JGI11643J12802_113978572	3300000890	Soil	MPIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILV
Ga0062593_1023018661	3300004114	Soil	VSIDFHDITIIANPEQAQVRDGSRRHSKKFPFQLSAAPTPEWVALFNREWAMRTVSNRAASVHGDSLVLECAIEELPLLAENLEVDM
Ga0062589_1005668132	3300004156	Soil	MPTDFQAITIIANPEPAQVRDGSRPHSKKFPFQLSAAPTPEWVALFNREWSMRDVPNRAASVHGDILLLECAIEELPILAENLEVDMTTANDQYRERLLRQEV
Ga0062591_1025631851	3300004643	Soil	MPIDFQAITIVANPERGQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILVLECDIEELPLLAENLEVDMTAANQQYRERLL
Ga0065704_108034311	3300005289	Switchgrass Rhizosphere	MPADFQAITIIANPEPAQVRDGSRPHSKKFPFQLSAAPTPEWVALFNREWSMRDIPNRAASVHGDILVLECDIDELPLLAENLEVDMTAANEQYRERLLRQQ
Ga0065712_104846611	3300005290	Miscanthus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILLLECAIEELPLLAENLEVDMRAANQ
Ga0065705_101365985	3300005294	Switchgrass Rhizosphere	MPIDFQAITIVANPERGQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILVLECDIEELPLLAENLEVDMTAA
Ga0065705_105183073	3300005294	Switchgrass Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERMLRQKV
Ga0070670_10000027633	3300005331	Switchgrass Rhizosphere	MSIDFQDITIIANPEEAQVRDGSRRHSKKFPFQLSDAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEE
Ga0070670_1008207131	3300005331	Switchgrass Rhizosphere	MPIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEE
Ga0070670_1012707131	3300005331	Switchgrass Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILV
Ga0070670_1014912592	3300005331	Switchgrass Rhizosphere	MQIDFQAITIVANPEPAQVRDGSRAHSKKFPFRLSAPPTPEWVALFNREWSMRTVPNRAASVHGD
Ga0070677_109374942	3300005333	Miscanthus Rhizosphere	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMIAANQQYRERLLRQKVKGQQ
Ga0070680_1002443351	3300005336	Corn Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFRLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENL
Ga0070669_1006015912	3300005353	Switchgrass Rhizosphere	MTSAFRDITIIANPDQSEVRDGSRRHSKKFPFRLSAAPTPEWVALFNREWSMRDVPNRAASVHGDILLLECAIEELPLLAENLE
Ga0070673_1011109112	3300005364	Switchgrass Rhizosphere	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDM
Ga0070673_1021875551	3300005364	Switchgrass Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSDAPTPEWVALFNREWAMRTVSNRAASVHGDI
Ga0070659_1003205801	3300005366	Corn Rhizosphere	MSIDFQDITIVANPEQAQVRDGTRRHSKKFPFQLSSAPTPEWVALFNRQWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERM
Ga0070705_1010643532	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDVLLLECDIEELPLLAENLEVDMT
Ga0070694_1013582901	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILLLECAIEELPLLAENLEVDM
Ga0070694_1013945382	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSSNFQDITIVSNPEPAQVRDGSRRHAKKFPFRLSAAPTPEWVALFNREWSMRSVPNRAASVHGDILVL
Ga0070662_1011037602	3300005457	Corn Rhizosphere	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDI
Ga0070706_1013391422	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILLLECAIEEL
Ga0070699_1007448631	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSTDFQDITIIANPEKTQVRDGSRRHAKKFPFRLSAAPTPEWVALFNREWSMRSVPNRAASVHGDILVLECAIEELPLLAE
Ga0068853_1009612971	3300005539	Corn Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSAAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYR
Ga0070672_1002053883	3300005543	Miscanthus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILVLECDIEELPVLATNLEVDMAAANQQYRERLLRQ
Ga0070686_1015114661	3300005544	Switchgrass Rhizosphere	MPTDFQAITIIANPQPAQVRDGSRAHSKKFPFQLSAAPTPEWVALFNREWSMREVPNRAASVHGDILLLECAIEELPLLA
Ga0070686_1015849981	3300005544	Switchgrass Rhizosphere	MPIDFEAITILANPEQAQVRDGSRPHSKKFPFRLSVAPTPEWVALFNREWSMRTVPNNAASVHGDILLLECAIEELPLLAENVE
Ga0070695_1002630051	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDVLLLECDIEELPLLAENLEVDMTAANQQYRERLLR
Ga0070695_1017588401	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDFQAIRIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERLLRQE
Ga0070695_1018446222	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMIAANQQYRERLLRQKVKGQQ
Ga0070696_1000397843	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILLLECAIEELPLLAENLEVDMTAANQQYRERLLRQEVKEHQ
Ga0070693_1004077321	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSTDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERLSRQKVK
Ga0070704_1015838051	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSIDFKDITILANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEV
Ga0068854_1010835122	3300005578	Corn Rhizosphere	MPIDFQSIAIIANPEQSQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRA
Ga0068854_1014110771	3300005578	Corn Rhizosphere	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERL
Ga0068859_1030808802	3300005617	Switchgrass Rhizosphere	MSIDFHDITIIANPEQAHVRDGSRRHSKKFPFQLSAAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERMLRQKVK
Ga0068866_103812622	3300005718	Miscanthus Rhizosphere	MSIDFKDITIIDNPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDI
Ga0068870_108912631	3300005840	Miscanthus Rhizosphere	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVH
Ga0068863_1016798473	3300005841	Switchgrass Rhizosphere	MPIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAAGVHGDILVLECAIEELPLLAENLEVDMIAANQQYRERLLR
Ga0068860_1018968862	3300005843	Switchgrass Rhizosphere	MPIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAAGVHGDILVLECAIEELPLLAENLEVDMIAANQQYRERLLRQKVKGQQ
Ga0068871_1006895502	3300006358	Miscanthus Rhizosphere	MSIDFEDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDVLVLECAIEELPLLAENLEVDMTA
Ga0079220_119777391	3300006806	Agricultural Soil	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILVLECAIEEL
Ga0075433_111744472	3300006852	Populus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDIL
Ga0075434_1004790453	3300006871	Populus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDVLLLECDIEELPLLAENLEVDMTAANQQY
Ga0075434_1026005571	3300006871	Populus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVAVFNREWSMRTVPNRAASVHGNILLLECDIEELPLLAENLEVDMT
Ga0075426_113058871	3300006903	Populus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILLLECAIEELPLLAENLEVDMT
Ga0079218_101666741	3300007004	Agricultural Soil	EQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMIAANQQYRRAAVTSESKGTASK*
Ga0105250_105117261	3300009092	Switchgrass Rhizosphere	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAEN
Ga0105250_106178951	3300009092	Switchgrass Rhizosphere	MSIDFEDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDVLVLECAIE
Ga0075418_111176013	3300009100	Populus Rhizosphere	MSINFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDSLVLECAIEELPL
Ga0105243_120070012	3300009148	Miscanthus Rhizosphere	MTSAFRDITIIANPDQSEVRDGSRRHSKKFPFRLSAAPTPEWVALFNREWSMRDVPNRAASVHGDILL
Ga0075423_102373793	3300009162	Populus Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILLLECAIEELPLLAENLEVDMTAANQQYR
Ga0105241_114605851	3300009174	Corn Rhizosphere	LRKKAIAKGAILMSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSDAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELP
Ga0105248_105107991	3300009177	Switchgrass Rhizosphere	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRER
Ga0105249_100413747	3300009553	Switchgrass Rhizosphere	MPIDFQAIRIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQHYRERLLRQEVKEHQ
Ga0105249_134460222	3300009553	Switchgrass Rhizosphere	MSIDFEDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERLS
Ga0126309_102908803	3300010039	Serpentine Soil	MSTDFQDITIIANPEQAEVRDGSRSHAKKFPFRLSAAPAPEWVAIFNREWSTRSAPNRAASVHGDILILECAIEELPLLAESLEDDLTAA
Ga0126309_107925922	3300010039	Serpentine Soil	MSNDFQDIAVIANPEQAQVRDGSRRHAKKFPFRLSAPPTPEWVAIFNREWSTMSVPNRAAGVHGDILILECAIEELPLLAENLEDDLTAANL
Ga0126312_102942571	3300010041	Serpentine Soil	MSDDFQNITVIANPEQAQVRDGSRRHAKKFPFRLSAAPTPEWVAIFNREWATRSAPNRAAGVHGDILILECAIEELPLL
Ga0126306_102651651	3300010166	Serpentine Soil	MSDDFQNITVIANPEQAQVRDGSRRHAKKFPFRLSAAPTPEWVAIFNREWSTRSSPNQAAGIHGDI
Ga0134128_107054021	3300010373	Terrestrial Soil	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPSPEWVALFNREWAMRTVSNRAASVHGDILVLE
Ga0134127_122003502	3300010399	Terrestrial Soil	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQ
Ga0134121_103618571	3300010401	Terrestrial Soil	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILVLECA
Ga0134123_130187662	3300010403	Terrestrial Soil	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSAAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQ
Ga0134123_135521761	3300010403	Terrestrial Soil	MPIECQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPAPEWVALFNREWAMRTVSNRAASVHGDIIVLECAIEELPLLAENLEVDMIAANQQYRERMLRQKVK
Ga0105246_118366921	3300011119	Miscanthus Rhizosphere	MPTDFQAITIIANPQPAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRDVPNRAASVHGDILLLECAIEELPLLAENLEVDMTTANEQ
Ga0137392_104468813	3300011269	Vadose Zone Soil	MSTDFQDIAIIANPEPAQVRDGSRRHAKKFPFLLSAAPTPEWVALFNREWSMRSVPHRAASVHGDILVLECAIEELHLLAENLEVDMTTANRQY
Ga0120182_10172411	3300011993	Terrestrial	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTTANQQYRKRLVRQEV
Ga0120191_100613902	3300012022	Terrestrial	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASIHGDILVLECAIEELPLL
Ga0157350_10185521	3300012499	Unplanted Soil	MAIDFHDITIIANPEQAQVRDGSRRHSKKFPFQLSAAPTPEWVAIFNREWGMRTVSNRAASVHGDILVLECAIEELPLLAENLEFDMTAANQQYRERLSRQKVKEHRY
Ga0157303_100839662	3300012896	Soil	MPIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLL
Ga0164300_103621191	3300012951	Soil	MKVLKATVKLKENLMSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAA
Ga0164303_111399932	3300012957	Soil	MSIDFHDITIIANPEQAQVRDGSRRHSKKFPFQLSAAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLANNLEVDMIAANEQYRERL*
Ga0164299_112405501	3300012958	Soil	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILVLECAIEELPVLAENLEVDMTA
Ga0157374_111418592	3300013296	Miscanthus Rhizosphere	MSIDFKDITILANPEQAQVRDGSRRHSKKFPFQLSEAPTHEWVAIFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAA
Ga0157378_111305291	3300013297	Miscanthus Rhizosphere	MPTDFQAITIIANPQPAQVRDGSRAHSKKFPFQLSAAPTPEWVALFNREWSMREVPNRAASVHGDILLLECAIEELPLLAENLEVDMTTANEQYRERLLR*
Ga0163162_134059891	3300013306	Switchgrass Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERMLRQKVKEQES
Ga0157372_100099091	3300013307	Corn Rhizosphere	MSIDFQDITIIANPEPAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERM
Ga0157372_102344421	3300013307	Corn Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPCQLSDAPTPEWVALFNREWAMRTVSNRAASVHGDILV
Ga0157375_100971861	3300013308	Miscanthus Rhizosphere	VSTDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQ
Ga0163163_101054041	3300014325	Switchgrass Rhizosphere	MSIDFQDITIIANPEEAQVRDGSRRHSKKFPFQLSDAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEEL
Ga0163163_126588972	3300014325	Switchgrass Rhizosphere	MPIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEEL
Ga0157380_109123251	3300014326	Switchgrass Rhizosphere	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEPPTPEWVALFNREWAMRTVSNRAASVHGDILVL
Ga0157380_113391602	3300014326	Switchgrass Rhizosphere	MSTDFKDITIIANPEPAQVRDGSRRHSKKFPFQLSEAPTPEWVALLNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEIDMATANQQ
Ga0182001_105066841	3300014488	Soil	MSTDFQDITIIANPEQTQVRDGSRSHAKKFPFRLSAAPTPEWVAIFNREWSTRSTPNRAAGVHGDILILECAIEELPLLAENLEDDLNAANQQYRERLLRQGAHD
Ga0132256_1022104431	3300015372	Arabidopsis Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSEAPTPEWVALFNREWSMRTVPNRAASVHGDI
Ga0132257_1011637842	3300015373	Arabidopsis Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILVLECDIEELPLLAENLEVDMTAANQQ
Ga0190268_116365701	3300018466	Soil	MSKDFQDIAVVANPEPAQVRDGSRRHSKKFPFRLSAAPTPEWVAVFNREWSTRSAPNQAASVHGDILILECAIEELPLLAENLEEDLTAANQQYRERLQREG
Ga0066662_114604391	3300018468	Grasslands Soil	MSTDFQDITVIANPEQAQVRDGSRRHAKKFPFRLSAAPTPEWVAIFNREWSMRSVPNRAASVHGDVLVLECAIEELP
Ga0190270_113394182	3300018469	Soil	MSDDFQDITIIANPEPAQVRDGSRRHSKKFPFRLSAAPTPEWVAIFNREWATRSEPNRAASVHGDILILECDIEDLPLLAENVEEELTAANRQYRERLL
Ga0190274_129620333	3300018476	Soil	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSDAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLANDL
Ga0182009_102668533	3300021445	Soil	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILLLECAIEELP
Ga0207638_10007742	3300025227	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHG
Ga0207647_101309842	3300025904	Corn Rhizosphere	QAQVRDGSRPHSKKFPFRLSVAPTPEWVALFNRQWSMRTVPNNAASVHGDILLLECAIEELPLLAENVEVDMIAANQ
Ga0207647_105585691	3300025904	Corn Rhizosphere	MSIDFKDITIIANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYREGCHVRK
Ga0207654_106885662	3300025911	Corn Rhizosphere	MPIDFQAITIIANPEQAQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILLLECAI
Ga0207660_113217802	3300025917	Corn Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQY
Ga0207657_111947981	3300025919	Corn Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQ
Ga0207659_102947994	3300025926	Miscanthus Rhizosphere	MSIDFKDITILANPEQAQVRDGSRRHSKKFPFQLSEAPTPEWVAIFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENL
Ga0207701_102539521	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDM
Ga0207670_116139481	3300025936	Switchgrass Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWSMRTVSNRAASVHGDILVLECA
Ga0207669_109196762	3300025937	Miscanthus Rhizosphere	MSIDFQDITIIANPEQGQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMTAANQQYRERMLRQKVKEQE
Ga0207711_112222232	3300025941	Switchgrass Rhizosphere	MQIDFQAITIVANPEPAQVRDGSRAHSKKFPFRLSAPPTPEWVALFNREWSMRTVPNRAASVHGDVLLLECAIDELPLLAENLEVDMRAANQQYRERLLRQEVK
Ga0207689_106433001	3300025942	Miscanthus Rhizosphere	MPIDFQAITIIANPEQSQVRDGSRAHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNNAASVHGDVLLLECAIEELPLL
Ga0207668_113882821	3300025972	Switchgrass Rhizosphere	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFRLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMKAANQQYRE
Ga0207640_107368192	3300025981	Corn Rhizosphere	MPTDFQAITIIANPQPAQVRDGSRAHSKKFPFQLSAAPTPEWVALFNREWSMREVPNRAASVHGDILLLECAIEELPLLAENLEVDMTTANEQYRE
Ga0207648_103744901	3300026089	Miscanthus Rhizosphere	MTSAFRDITIIANPDQSEVRDGSRRHSKKFPFRLSAAPTPEWVALFNREWSMRDVPNRAASVHGDILLLEC
Ga0207676_103795921	3300026095	Switchgrass Rhizosphere	VSIDFHDITIIANPEQAQVRDGSRRHSKKFPFQLSAAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLANNLEAD
Ga0208213_1034622	3300026686	Soil	MSDEFQDIAVIANPEPAEVRDGSRSHAKKFPFRLSAAPTPEWVAIFNREWSTRSAPNRAAGVHGDILI
Ga0209486_100416743	3300027886	Agricultural Soil	MSIDFQDITIIANPEQVQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMIAANQQYRRAAVTSESKGTASK
Ga0268265_106480511	3300028380	Switchgrass Rhizosphere	MPIDFQAITILANPEQAQVRDGSRPHSKKFPFRLSAAPTPEWVALFNRQWSMRTVPNNAASVHGDILLLECAIEELPLLAENVEVDMIAANQQYR
Ga0268264_100306137	3300028381	Switchgrass Rhizosphere	MSIDFQDITIIANPEEAQVRDGSRRHSKKFPFQLSDAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAEN
Ga0307468_1009076541	3300031740	Hardwood Forest Soil	MSTDFKDITVIANPEQAEVRDGSRRHAKKFPFRLSAAPSPEWVAIFNREWSTRSAPNRAAGVHGDILILECAIE
Ga0310907_100873372	3300031847	Soil	MSIDFRDITIIANPEQSQVRDGSRRHSKKFPFQLSAAPTPEWVALFNREWSMREVPNRAASVHGDILLLECAIEELPLLAENLEVDMATANQQYRER
Ga0310890_101334951	3300032075	Soil	MPTDFQAITIIANPQPAQVRDGSRAHSKKFPFQLSAAPTPEWVALFNREWSMRNVPNRAASVHGDILLLECAIEELPLLAENLEVDMTTANEQYRE
Ga0310890_113581471	3300032075	Soil	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAIEELPLLAENLEVDMIAANQQYRERML
Ga0310895_105284961	3300032122	Soil	MSIDFRDITIIANPEQSQVRDGSRRHSKKFPFQLSAAPTPEWVALFNREWSMREVPNRAASVHGDILLLECAIEELPLLAENLEVDMATANQQYRERLLGQEEKEQH
Ga0310896_106270852	3300032211	Soil	MPIDFQAIRIIANPEQAQVRDGSRTHSKKFPFRLSAAPTPEWVALFNREWSMRTVPNRAASVHGDILLLECAIEELPLLAENLE
Ga0310812_100772293	3300032421	Soil	MSIDFQDITIIANPEQAQVRDGSRRHSKKFPFQLSGAPTPEWVALFNREWAMRTVSNRAASVHGDILVLECAI
Ga0334920_024044_3_242	3300034002	Hypolithic Biocrust	MSTDFQDIAIIANPEQAEVRDGSRRHAKKFPFRLSAAPTPEWVALFNREWSMRSVPNRAASVHGDSLVLECAIEELPLLA
Ga0334936_040356_744_968	3300034007	Biocrust	MSHEFQDIAVIANPEKAEVRDGSRSHAKKFPFRLSAAPAPEWVAIFNREWSTRSSPNRAASVHGDILILECAIDE
Ga0334944_018574_1128_1316	3300034009	Sub-Biocrust Soil	MSTDFQDITIIANPEQAEVRDGSRSHAKKFPFRLSAAPAPEWVAIFNREWSTRSAPNRAAGVH
Ga0334944_111808_1_318	3300034009	Sub-Biocrust Soil	MSDEFQDIAVIANPEQAEVRDGSRSHAKKFPFRLSAAPAPEWVAIFNREWSTRSVPNRAASVHGDILILECAIEELPLLAEGLEDDLTTANQQYRERLQRQGVNDR
Ga0334946_015356_2_208	3300034026	Sub-Biocrust Soil	MSDEFHDIAVIANPEQAQVRDGSRSHAKKFPFRLSAAPAPEWVAIFNREWSTRSAPNRAAGVHGDILIL
Ga0334943_045477_590_832	3300034137	Biocrust	VSTDFQDISIIANPEQAQVRDGSRSHAKKFPFRLSAAPAPEWVAIFNREWSTRSEPNRAAGVHGDILILECAIEELPLLAE
Ga0334932_042897_3_278	3300034174	Sub-Biocrust Soil	MSKPKEQIVSDDFQDITVIANPEQAQVRDGSRRHAKKFPFRLSAAPTPEWVAIFNREWSTRSAPNRAAGVHGDILILECAIEELPLLAEGLE
Ga0334937_084448_639_875	3300034221	Biocrust	MSDEFQEIAVIANPEQAEVRDGSRSHAKKFPFRLSAAPAPEWVAIFNREWSTRSAPNRAASVHGDILILECAIDELPLL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060006

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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