NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F059918

Metagenome / Metatranscriptome Family F059918

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F059918
Family Type Metagenome / Metatranscriptome
Number of Sequences 133
Average Sequence Length 84 residues
Representative Sequence VIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEK
Number of Associated Samples 97
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.75 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 93.23 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (54.135 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(55.639 % of family members)
Environment Ontology (ENVO) Unclassified
(69.173 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.481 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 76.54%    β-sheet: 0.00%    Coil/Unstructured: 23.46%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF07484Collar 0.75
PF17212Tube 0.75
PF13884Peptidase_S74 0.75
PF00534Glycos_transf_1 0.75



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.64 %
UnclassifiedrootN/A44.36 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001347|JGI20156J14371_10067139Not Available1354Open in IMG/M
3300005512|Ga0074648_1123576All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300006026|Ga0075478_10122893All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300006027|Ga0075462_10055029Not Available1261Open in IMG/M
3300006027|Ga0075462_10068895All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300006029|Ga0075466_1070013All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300006637|Ga0075461_10076097Not Available1069Open in IMG/M
3300006802|Ga0070749_10130692All Organisms → cellular organisms → Bacteria → Proteobacteria1470Open in IMG/M
3300006802|Ga0070749_10768628Not Available512Open in IMG/M
3300006810|Ga0070754_10417411All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300006810|Ga0070754_10479782Not Available537Open in IMG/M
3300006810|Ga0070754_10497393Not Available525Open in IMG/M
3300006867|Ga0075476_10360099All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300006868|Ga0075481_10117673All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300006868|Ga0075481_10356705Not Available504Open in IMG/M
3300006869|Ga0075477_10409929Not Available526Open in IMG/M
3300006870|Ga0075479_10156851All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300006870|Ga0075479_10302240All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300006916|Ga0070750_10373767Not Available598Open in IMG/M
3300006919|Ga0070746_10335393Not Available688Open in IMG/M
3300006919|Ga0070746_10419261Not Available598Open in IMG/M
3300006919|Ga0070746_10478572Not Available550Open in IMG/M
3300006919|Ga0070746_10536643Not Available509Open in IMG/M
3300006919|Ga0070746_10536646Not Available509Open in IMG/M
3300006919|Ga0070746_10550953Not Available500Open in IMG/M
3300006920|Ga0070748_1030033All Organisms → cellular organisms → Bacteria2234Open in IMG/M
3300006920|Ga0070748_1282844All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300007229|Ga0075468_10237117Not Available521Open in IMG/M
3300007236|Ga0075463_10180655All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300007236|Ga0075463_10224954Not Available604Open in IMG/M
3300007236|Ga0075463_10301673Not Available513Open in IMG/M
3300007276|Ga0070747_1311930All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300007276|Ga0070747_1311956Not Available540Open in IMG/M
3300007344|Ga0070745_1342684Not Available526Open in IMG/M
3300007345|Ga0070752_1009040All Organisms → cellular organisms → Bacteria5477Open in IMG/M
3300007345|Ga0070752_1253904All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300007345|Ga0070752_1339718Not Available565Open in IMG/M
3300007345|Ga0070752_1391061Not Available515Open in IMG/M
3300007346|Ga0070753_1114232All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300007346|Ga0070753_1367352Not Available505Open in IMG/M
3300007539|Ga0099849_1030244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.2319Open in IMG/M
3300007540|Ga0099847_1050580All Organisms → cellular organisms → Bacteria1309Open in IMG/M
3300007540|Ga0099847_1183704Not Available614Open in IMG/M
3300007541|Ga0099848_1208662All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300007640|Ga0070751_1369625Not Available522Open in IMG/M
3300007640|Ga0070751_1393693Not Available500Open in IMG/M
3300008012|Ga0075480_10228846All Organisms → cellular organisms → Bacteria970Open in IMG/M
3300008012|Ga0075480_10314933Not Available790Open in IMG/M
3300009027|Ga0102957_1030413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.1843Open in IMG/M
3300009054|Ga0102826_1174745All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300009440|Ga0115561_1015722Not Available3905Open in IMG/M
3300009537|Ga0129283_10435951Not Available565Open in IMG/M
3300010296|Ga0129348_1004447All Organisms → cellular organisms → Bacteria5131Open in IMG/M
3300010318|Ga0136656_1187727All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300013010|Ga0129327_10125749All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300013181|Ga0116836_1027715Not Available603Open in IMG/M
3300016740|Ga0182096_1012658All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300016745|Ga0182093_1706945All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300017697|Ga0180120_10369244All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300017720|Ga0181383_1161264All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300017756|Ga0181382_1112962All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300017768|Ga0187220_1200097All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300017782|Ga0181380_1221603All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300017951|Ga0181577_10246376All Organisms → cellular organisms → Bacteria1177Open in IMG/M
3300017951|Ga0181577_10941943Not Available512Open in IMG/M
3300017956|Ga0181580_10201003All Organisms → cellular organisms → Bacteria1399Open in IMG/M
3300017957|Ga0181571_10893267Not Available523Open in IMG/M
3300018049|Ga0181572_10077814All Organisms → cellular organisms → Bacteria2190Open in IMG/M
3300018049|Ga0181572_10506601All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300018416|Ga0181553_10535336Not Available623Open in IMG/M
3300018418|Ga0181567_10206499Not Available1343Open in IMG/M
3300018418|Ga0181567_10762863All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300018421|Ga0181592_10716191Not Available667Open in IMG/M
3300018421|Ga0181592_11023584Not Available531Open in IMG/M
3300018424|Ga0181591_10417654Not Available995Open in IMG/M
3300018424|Ga0181591_10630691All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300018424|Ga0181591_10776165Not Available668Open in IMG/M
3300018876|Ga0181564_10696104Not Available535Open in IMG/M
3300019459|Ga0181562_10574900All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300019708|Ga0194016_1016029All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300019738|Ga0193994_1062377Not Available538Open in IMG/M
3300019765|Ga0194024_1069616All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300019765|Ga0194024_1154786Not Available539Open in IMG/M
3300020174|Ga0181603_10179120All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300020177|Ga0181596_10142272All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300020185|Ga0206131_10261916Not Available798Open in IMG/M
3300020185|Ga0206131_10416206Not Available555Open in IMG/M
3300020595|Ga0206126_10525709All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300020601|Ga0181557_1202623All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300021375|Ga0213869_10357741All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300021378|Ga0213861_10493932Not Available582Open in IMG/M
3300021961|Ga0222714_10046986All Organisms → Viruses → Predicted Viral3030Open in IMG/M
3300021964|Ga0222719_10457422All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300022050|Ga0196883_1045775All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300022057|Ga0212025_1070254Not Available604Open in IMG/M
3300022068|Ga0212021_1121696Not Available534Open in IMG/M
3300022069|Ga0212026_1010635All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300022069|Ga0212026_1031559Not Available779Open in IMG/M
3300022168|Ga0212027_1003951All Organisms → Viruses → Predicted Viral1932Open in IMG/M
3300022183|Ga0196891_1053643All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300022187|Ga0196899_1048080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.1411Open in IMG/M
3300022187|Ga0196899_1083738All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300022187|Ga0196899_1211276Not Available509Open in IMG/M
3300022308|Ga0224504_10224636All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300022909|Ga0255755_1040981All Organisms → cellular organisms → Bacteria2372Open in IMG/M
3300022934|Ga0255781_10367219All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300023105|Ga0255782_10071171All Organisms → cellular organisms → Bacteria1892Open in IMG/M
(restricted) 3300023109|Ga0233432_10261785All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300023173|Ga0255776_10568836Not Available559Open in IMG/M
3300023176|Ga0255772_10393431Not Available701Open in IMG/M
3300025508|Ga0208148_1067857Not Available835Open in IMG/M
3300025610|Ga0208149_1081437All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300025630|Ga0208004_1145326Not Available517Open in IMG/M
3300025653|Ga0208428_1181986Not Available547Open in IMG/M
3300025671|Ga0208898_1067544All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300025674|Ga0208162_1172119Not Available574Open in IMG/M
3300025751|Ga0208150_1187760All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300025759|Ga0208899_1233804All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300025759|Ga0208899_1247456Not Available532Open in IMG/M
3300025759|Ga0208899_1264523Not Available503Open in IMG/M
3300025769|Ga0208767_1104511Not Available1125Open in IMG/M
3300025769|Ga0208767_1244510All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300025771|Ga0208427_1145292All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300025803|Ga0208425_1016386All Organisms → cellular organisms → Bacteria1997Open in IMG/M
3300025840|Ga0208917_1201808All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300025853|Ga0208645_1263808All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300025889|Ga0208644_1005352All Organisms → cellular organisms → Bacteria9489Open in IMG/M
3300026138|Ga0209951_1014020All Organisms → cellular organisms → Bacteria1774Open in IMG/M
3300029293|Ga0135211_1020230Not Available735Open in IMG/M
3300029318|Ga0185543_1036168All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300029632|Ga0135266_109330All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300032274|Ga0316203_1045662All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300034418|Ga0348337_046432Not Available1798Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous55.64%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh19.55%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.01%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.01%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.26%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.50%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.50%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.50%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.50%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor1.50%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.50%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.75%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.75%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.75%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.75%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.75%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.75%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.75%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.75%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.75%
Beach Aquifer PorewaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater0.75%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001347Pelagic Microbial community sample from North Sea - COGITO 998_met_06EnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009054Estuarine microbial communities from the Columbia River estuary - metaG S.737EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009537Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - D-2WEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300013181Marine hypoxic microbial communities from the Gulf of Mexico, USA - 9m_Station6_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300016740Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413YT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016745Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018418Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018876Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019708Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MGEnvironmentalOpen in IMG/M
3300019738Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_0-1_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020177Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300020601Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022069Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)EnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022308Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_24EnvironmentalOpen in IMG/M
3300022909Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaGEnvironmentalOpen in IMG/M
3300022934Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaGEnvironmentalOpen in IMG/M
3300023105Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300029293Marine harbor viral communities from the Indian Ocean - SCH2EnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300029632Marine harbor viral communities from the Pacific Ocean - SMB3EnvironmentalOpen in IMG/M
3300032274Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI20156J14371_1006713943300001347Pelagic MarineIVGTCVWGYSVVWNKLATLDNGLDRVQHEGTLLGDLSARMMHIEKFAEQAKKDLDHLVEMQDAPITSDFQQFERLKYLEKELDRLRSITENHLMKGQ*
Ga0074648_112357613300005512Saline Water And SedimentVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKELDRLRDKLENHLMKGQ*
Ga0075478_1012289313300006026AqueousVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERIRYLEKELDRMRDKLENHLTK*
Ga0075462_1005502953300006027AqueousVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEK*
Ga0075462_1006889543300006027AqueousVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDRVEE*
Ga0075466_107001313300006029AqueousVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDRVEE*
Ga0075461_1007609743300006637AqueousWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEK*
Ga0070749_1013069233300006802AqueousWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKEVDRLRAKFDNLMYIAR*
Ga0070749_1076862823300006802AqueousNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKGDLDHLMSLQDAPITSDYQQFERIKYLEKELDILRGKFDYFIYGVK*
Ga0070754_1041741113300006810AqueousYSVIWNKINELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEE*
Ga0070754_1047978223300006810AqueousWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDAPITSDYQQFERIKYLEKELDRLRSKMENHLMKGQ*
Ga0070754_1049739313300006810AqueousINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK*
Ga0075476_1036009913300006867AqueousVIWNKINELDNGLGRVQHEGTMLGDLSARMMHIEKFAEQAKADLDSLVAKQDEPITSDYQQFERIKYLEKELDRIRDKVEGHSDFIEQ*
Ga0075481_1011767313300006868AqueousSVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERIKYLEKELDILRGKFDYFIYGVK*
Ga0075481_1035670513300006868AqueousVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKGDLDHLMSLQDAPITSDHQQFERIKYLEKELDILRGKFDYFIYGVK*
Ga0075477_1040992913300006869AqueousWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKELDRLRDKLENHLTKGQ*
Ga0075479_1015685113300006870AqueousAVVGSVVWGYSVVWNKIIALDSGLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLDHLLEMQDKPITSDFQQFERLRYLEKELDRLRSKMESHLTESR*
Ga0075479_1030224023300006870AqueousWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERIKYLEKELDILRGKFDYFIYGAR*
Ga0070750_1037376723300006916AqueousCVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMMHLEKFAEQAKADLDHLVAMQDKPITSDYQQFERLKYLEKELDRLRDSVGK*
Ga0070746_1033539313300006919AqueousTCVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK*
Ga0070746_1041926133300006919AqueousVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK*
Ga0070746_1047857213300006919AqueousELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEE*
Ga0070746_1053664323300006919AqueousSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDRVEE*
Ga0070746_1053664623300006919AqueousSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDKVEE*
Ga0070746_1055095323300006919AqueousVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKGDLDHLMSLQDAPITSDYQQFERIKYLEKELDILRGKFDYFIYGVK*
Ga0070748_103003353300006920AqueousGTCVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK*
Ga0070748_128284413300006920AqueousIVGTCVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK*
Ga0075468_1023711713300007229AqueousIAIVGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKADLDHLLEMQDSPITSDYQQFERLRYLEKELDRLRVKMDDYD*
Ga0075463_1018065523300007236AqueousVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKEVDRLRAKFDNMMYIAR*
Ga0075463_1022495423300007236AqueousLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEK*
Ga0075463_1030167323300007236AqueousLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLNHLLEMQDAPITSDYQQFERLKYLEKELDRLRNKVEGTK*
Ga0070747_131193013300007276AqueousELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK*
Ga0070747_131195623300007276AqueousCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKADLNHLLEMQDSPITSDYQQFERLRYLEKELDRLRIKMDDYD*
Ga0070745_134268423300007344AqueousVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDAPITSDYQQFERIKYLEKELDRLRSKMENHLMKGQ*
Ga0070752_100904013300007345AqueousSVIWNKINELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEE*
Ga0070752_125390413300007345AqueousVGSVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERLKYLEKELDILRGKFDYFIYGVK*
Ga0070752_133971823300007345AqueousVGTAVWGYSVIWNKLSTLDNGLDRVQHEGTLLGDLSARMMHIEKFAEQAKTDLDHLVEMQDAPITSDHQQFERIKYLEKELDRLRDKMENHLTK*
Ga0070752_139106123300007345AqueousNELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKGDLDHLMSLQDAPITSDHQQFERIKYLEKELDILRGKFDYFIYGVK*
Ga0070753_111423213300007346AqueousNKINELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEE*
Ga0070753_136735223300007346AqueousNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDAPITSDYQQFERIKYLEKELDRLRSKMENHLMKGQ*
Ga0099849_103024413300007539AqueousNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLEHLVNMQDAPITSDYQQFERLNYLEKELDRLRDKVEK*
Ga0099847_105058033300007540AqueousSLDRVQHEGTLLGDLSARMMHLEKFAEQSKADLDHLLEMQDSPITSDHQQFERLKYLEKELDRLRDKVEGIK*
Ga0099847_118370423300007540AqueousIWNKINELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEK*
Ga0099848_120866223300007541AqueousLGRVQHEGTILGDLSARMMHIEKFAEQAKADLDSLVAKQDEPITSDYQQFERIKYLEKELDRLRDKVEGHSDFIE*
Ga0070751_136962523300007640AqueousAIVGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKELDRLRDKLENHLTKGQ*
Ga0070751_139369323300007640AqueousVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKEVDRLRAKFDNLMYIAR*
Ga0075480_1022884623300008012AqueousAVVGSVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERIKYLEKELDILRGKFDYFIYGVK*
Ga0075480_1031493313300008012AqueousYSVIWNKINELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEK*
Ga0102957_103041343300009027Pond WaterWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLLKMQDAPITSDYQQFERLKYIEKELDRLRDRVEK*
Ga0102826_117474513300009054EstuarineTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLHHLLEMQDAPITSDHQQFERLKYLEKELDRLRDKVEGIK*
Ga0115561_1015722113300009440Pelagic MarineVVWNKLATLDNGLDRVQHEGTLLGDLSARMMHIEKFAEQAKKDLDHLVEMQDAPITSDFQQFERLKYLEKELDRLRSITENHLMKGQ*
Ga0129283_1043595113300009537Beach Aquifer PorewaterSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKELDRMRDKLENHLTK*
Ga0129348_100444713300010296Freshwater To Marine Saline GradientKINELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDKVEK*
Ga0136656_118772723300010318Freshwater To Marine Saline GradientVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLNHLLEMQDAPITSDYQQFERLKYLEKELDRLRNKVEGTK*
Ga0129327_1012574953300013010Freshwater To Marine Saline GradientCVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHIEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK*
Ga0116836_102771513300013181MarineIWNKLTTLDNGLDRVQHEGTMLGDLSARMMHIEKFAEQAKSDLDHLVEMQDMPITSDHQQFERLKYLEKELDRLRDMMDEIRAQR*
Ga0182096_101265813300016740Salt MarshLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRDRLENHLMKGQ
Ga0182093_170694523300016745Salt MarshNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRDKLENHLMKGQ
Ga0180120_1036924413300017697Freshwater To Marine Saline GradientKINELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLEHLVNMQDAPITSDYQQFERLKYIEKELDRLRDKVEE
Ga0181383_116126413300017720SeawaterWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDRVEK
Ga0181382_111296233300017756SeawaterYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDRVEK
Ga0187220_120009713300017768SeawaterWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDKVEE
Ga0181380_122160323300017782SeawaterIAIVGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLHHLLEMQDAPITSDHQQFERLKYLEKELDRLRDKVEGIK
Ga0181577_1024637633300017951Salt MarshTLDNGLDRVQHEGTLLGDLSARMMHIEKFAEQAKTDLDHLVEMQDAPITSDHQQFERIKYLEKELDILRAKVDQMRLGAW
Ga0181577_1094194323300017951Salt MarshWNKINELDNGLGRVQHEGTMLGDLSARMLHLEKFAEQSKGDLDHLMSLQDAPITSDYQQFERIKYLEKELDILRGKFDYFIYGVK
Ga0181580_1020100323300017956Salt MarshLIARLNTLDMQLERVTHESTLLGDLSARMMHIEKFAEQAKTDLQNLVGKQDDPITSDYQQFERIKYLEKELDRLRSKMETHLTK
Ga0181571_1089326723300017957Salt MarshGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLNHLLEMQDAPITSDYQQFERIKYLEKELDRLRSKMENHLTKGQ
Ga0181572_1007781443300018049Salt MarshYSVVWNKLNALDSGLDRVQHEGTLLGDLSARMMHIEKFAEQSKSDLEHLMTLQDAPITSDYQQFERIKYLEKELDRLRYVVDQMSPFFQVAR
Ga0181572_1050660113300018049Salt MarshMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRDKLENHLMKGQ
Ga0181553_1053533613300018416Salt MarshKINELDNGLGRVQHEGTMLGDLSARMMHIEKFAEQAKADLDSLVAKQDEPITSDYQQFERIKYLEKELDRLRTISENHLMKGQ
Ga0181567_1020649943300018418Salt MarshSVIWNKITTLHNGLNRVQHEGTLLGDLSARMMHIEKFAEQAKADLDNLVGKQDEPITSDHQQFERLKYLEKELDRLRDKMENHLTK
Ga0181567_1076286323300018418Salt MarshVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLNHLLEMQDAPITSDYQQFERLKYLEKELDRLRNKVEGTK
Ga0181592_1071619123300018421Salt MarshNELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRDKVEDG
Ga0181592_1102358413300018421Salt MarshTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKELDRMRDKLENHLTK
Ga0181591_1041765433300018424Salt MarshTLDNGLDRVQHEGSLLGDLSARMMHIEKFAEQAKADLDNLVEKQDEPITSDYQQFERLKYLEKELDRLRNKIENHLTK
Ga0181591_1063069113300018424Salt MarshTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRDKLENHLTKGQ
Ga0181591_1077616513300018424Salt MarshSVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHFLEMQDMPITSDHQQFERLKYLEKELDRLRDKVEK
Ga0181564_1069610423300018876Salt MarshWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDKVEK
Ga0181562_1057490023300019459Salt MarshVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRSKMENHLTKGQ
Ga0194016_101602913300019708SedimentWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKEVDRLRAKFDNLMYIAR
Ga0193994_106237713300019738SedimentNELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERIKYLEKELDILRGKFDYFIYGVK
Ga0194024_106961613300019765FreshwaterLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLDHLLEMQDQPITSDHQQFERLKYLEKELDRLRDKVEGTK
Ga0194024_115478623300019765FreshwaterWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKELDRMRDKLENHLTK
Ga0181603_1017912023300020174Salt MarshIVGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRMRDKLENHLMKGQ
Ga0181596_1014227213300020177Salt MarshSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRDRLENHLMKGQ
Ga0206131_1026191613300020185SeawaterGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIERFAEQSKADLNHLLEMQDAPITSDYQQFERLRYLEKELDRLRVKMDDYD
Ga0206131_1041620623300020185SeawaterGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDYQQFERLRYLEKELDRLRIKMDNHLTKGQ
Ga0206126_1052570923300020595SeawaterIVGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLLEMQDAPITSDHQQFERLKYLEKELDRLRDKVEGTK
Ga0181557_120262323300020601Salt MarshSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRDKLENHLMKGQ
Ga0213869_1035774113300021375SeawaterGTCVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK
Ga0213861_1049393213300021378SeawaterVGTCVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK
Ga0222714_1004698653300021961Estuarine WaterIVGTCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRDKLENHLMKGQ
Ga0222719_1045742213300021964Estuarine WaterELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRDKVEK
Ga0196883_104577513300022050AqueousNNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEE
Ga0212025_107025423300022057AqueousVVGSVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMMHIEKFAEQSKADLDHLLEMQDAPITSDHQQFERLKYLEKELDILRMKV
Ga0212021_112169613300022068AqueousSVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERLKYLEKELDILRGKFDYFIYGVK
Ga0212026_101063513300022069AqueousELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERIRYLEKELDRMRDKLENHLTK
Ga0212026_103155933300022069AqueousWNKINELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLEHLVNMQDAPITSDYQQFERLKYIEKELDRLRDKVEK
Ga0212027_100395133300022168AqueousIWNKINELDNGLGRVQHEGTMLGDLSARMLHLEKFAEQSKADLDHLLEMQDMPITSDHQQFERLKYLEKELDILRGKFDYFIYGVK
Ga0196891_105364313300022183AqueousVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLEHLVNMQDAPITSDYQQFERLKYIEKELDRLRDRVEE
Ga0196899_104808013300022187AqueousNELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEE
Ga0196899_108373813300022187AqueousVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERIKYLEKELDILRGKFDYFIYGAR
Ga0196899_121127623300022187AqueousVVGSVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERLKYLEKEVDILRLKMDRIVYGAR
Ga0224504_1022463613300022308SedimentIIALDSGLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLDHLLEMQDKPITSDFQQFERLRYLEKELDRMRAKLESHLTESR
Ga0255755_104098113300022909Salt MarshVIWNKISTLDNGLDRVQHEGTLLGDLSARMMHIEKFAEQAKTDLDHLVEMQDAPITSDHQQFERIKYLEKELNIVRSKLDWLTMGAR
Ga0255781_1036721933300022934Salt MarshYSVIWNKINELDNSLGRVQHESTLLGDLSARMMHLEKFAEQAKADLDHLVKMQDAPITSDYQQFERLKYIEKELDRLRDRVEE
Ga0255782_1007117143300023105Salt MarshLDSGLDRVQHEGTLLGDLSARMMHIEKFAEQSKSDLEHLMTLQDAPITSDYQQFERIKYLEKELDRLRYVVDQMSPFFQVAR
(restricted) Ga0233432_1026178523300023109SeawaterVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHIEKFAEQSKADLNHLIEMQDAPITSDHQQFERLRYLEKELDRLRDKVEGIK
Ga0255776_1056883623300023173Salt MarshGLDRVQHEGTLLGDLSARMMHIEKFAEQAKADLDNLVEKQDEPITSDYQQFERLKYLEKELDRLRNKIENHLTK
Ga0255772_1039343113300023176Salt MarshDNGLDRVQHEGSLLGDLSARMMHIEKFAEQAKADLDNLVEKQDEPITSDYQQFERLKYLEKELDRLRNKIENHLTK
Ga0208148_106785733300025508AqueousLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK
Ga0208149_108143713300025610AqueousVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERIRYLEKELDRMRDKLENHLTK
Ga0208004_114532623300025630AqueousVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDRVEE
Ga0208428_118198613300025653AqueousVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKGDLDHLMSLQDAPITSDHQQFERIKYLEKELDILRGKFDYFIYGVK
Ga0208898_106754413300025671AqueousGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRDRVEK
Ga0208162_117211923300025674AqueousVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERLKYLEKELDILRGKFDYFIYGVK
Ga0208150_118776013300025751AqueousVIWNKINELDNGLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELDRLRDKVEE
Ga0208899_123380413300025759AqueousNELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDKVEE
Ga0208899_124745613300025759AqueousCVWGYSVVWNKLMVLDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKEVDRLRAKFDNMMYIAR
Ga0208899_126452313300025759AqueousNKINELDNGLGRVQHEGTMLGDLSARMMHLEKFAEQAKADLDHLVAMQDKPITSDYQQFERLKYLEKELDRLRDSVGK
Ga0208767_110451133300025769AqueousDSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKADLNHLLEMQDAPITSDHQQFERIRYLEKEVDRLRAKFDNLMYIAR
Ga0208767_124451013300025769AqueousIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDKVEK
Ga0208427_114529213300025771AqueousLERVQHEGTLLGDLSARMMHLEKFAEQSKVDLNHLLEMQDAPITSDYQQFERLKYLEKELDRLRNKVEGTK
Ga0208425_101638613300025803AqueousVQHEGTLLGDLSARMMHLEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRDKLENHLMKGQ
Ga0208917_120180823300025840AqueousSVVWGYSVIWNKINELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKADLDHLLEMQDMPITSDHQQFERIKYLEKELDILRGKFDYFIYGVK
Ga0208645_126380823300025853AqueousELDNGLGRVQHEGTMLGDLSARMLHIEKFAEQSKGDLDHLMSLQDAPITSDHQQFERIKYLEKELDILRGKFDYFIYGVK
Ga0208644_100535213300025889AqueousWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHIEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRDKVEK
Ga0209951_101402033300026138Pond WaterSSLDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLNHLLEMQDSPITSDYQQFERIKYLEKELDRLRSKMENHLTKGQ
Ga0135211_102023013300029293Marine HarborFPVTIGVDRVQHEGTLLGDLSARMMHIEKFAEQAKSDLDHLVDMQDAPITSDYQQFERIKYLEKELDRLRDKVENHLTK
Ga0185543_103616813300029318MarineGTAVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDYQQFERLKYIEKELDRLRDKVE
Ga0135266_10933013300029632Marine HarborKIRFSQSRSVWGYSVIWNKINELDNSLGRVQHEGTLLGDLSARMMHIEKFAEQAKADLDHLVEMQDAPITSDYQQFERLNYLEKELERLRDKVEK
Ga0316203_104566213300032274Microbial MatELDNSLGRVQHEGTLLGDLSARMMHLEKFAEQAKADLDHLVEMQDAPITSDFQQFERLNYLEKELDRLRNRVEK
Ga0348337_046432_1_2253300034418AqueousDRVQHEGTLLGDLSARMMHLEKFAEQSKVDLDHLLEMQDSPITSDFQQFERIKYLEKELDRLRDKLENHLMKGQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.