Metagenome Family F059858

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059858
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	45 residues
Representative Sequence	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGA
Number of Associated Samples	110
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.64 %
% of genes near scaffold ends (potentially truncated)	94.74 %
% of genes from short scaffolds (< 2000 bps)	78.95 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.489 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.308 % of family members)
Environment Ontology (ENVO)	Unclassified (45.865 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.880 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.94% β-sheet: 0.00% Coil/Unstructured: 43.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01103	Omp85	74.44
PF07244	POTRA	18.80
PF00496	SBP_bac_5	3.01
PF01923	Cob_adeno_trans	0.75
PF13738	Pyr_redox_3	0.75
PF01761	DHQ_synthase	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.49 %
Unclassified	root	N/A	4.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.49 %
Unclassified	root	N/A	4.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.49 %
Unclassified	root	N/A	4.51 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	73.68 %
Unclassified	root	N/A	4.51 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	73.68 %
Unclassified	root	N/A	4.51 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	57.89 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.26 %
Unclassified	root	N/A	4.51 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	57.89 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.26 %
Unclassified	root	N/A	4.51 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.75 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	57.89 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5.26 %
Unclassified	root	N/A	4.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	57.89 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	5.26 %
Unclassified	root	N/A	4.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	57.89 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5.26 %
Unclassified	root	N/A	4.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1053559	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	655	Open in IMG/M
3300002916\|JGI25389J43894_1071848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	598	Open in IMG/M
3300005174\|Ga0066680_10062573	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
3300005178\|Ga0066688_10608364	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	702	Open in IMG/M
3300005187\|Ga0066675_10465466	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	941	Open in IMG/M
3300005294\|Ga0065705_10923018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	566	Open in IMG/M
3300005436\|Ga0070713_100893463	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300005440\|Ga0070705_101624281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300005450\|Ga0066682_10029694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3189	Open in IMG/M
3300005468\|Ga0070707_100235716	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1781	Open in IMG/M
3300005518\|Ga0070699_100507970	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1095	Open in IMG/M
3300005518\|Ga0070699_101770976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300005549\|Ga0070704_100173434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1718	Open in IMG/M
3300005554\|Ga0066661_10533134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	705	Open in IMG/M
3300005556\|Ga0066707_10940762	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300005557\|Ga0066704_10017899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4116	Open in IMG/M
3300005557\|Ga0066704_10745277	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300005560\|Ga0066670_10295395	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	985	Open in IMG/M
3300005576\|Ga0066708_10972872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300005586\|Ga0066691_10432358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	785	Open in IMG/M
3300005598\|Ga0066706_10077697	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2344	Open in IMG/M
3300005880\|Ga0075298_1025833	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006031\|Ga0066651_10174251	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1134	Open in IMG/M
3300006031\|Ga0066651_10498823	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	645	Open in IMG/M
3300006034\|Ga0066656_10069556	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300006755\|Ga0079222_10117301	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300006797\|Ga0066659_10263916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1296	Open in IMG/M
3300006797\|Ga0066659_10711930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	822	Open in IMG/M
3300006804\|Ga0079221_10179617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1139	Open in IMG/M
3300006804\|Ga0079221_11680581	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	517	Open in IMG/M
3300006854\|Ga0075425_101613078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	731	Open in IMG/M
3300006904\|Ga0075424_102328786	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300006914\|Ga0075436_100118481	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300006914\|Ga0075436_100244398	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300007265\|Ga0099794_10642048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	563	Open in IMG/M
3300009012\|Ga0066710_102060669	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	841	Open in IMG/M
3300009089\|Ga0099828_11164687	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	684	Open in IMG/M
3300009089\|Ga0099828_11584728	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	577	Open in IMG/M
3300009090\|Ga0099827_10105801	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2244	Open in IMG/M
3300009090\|Ga0099827_10293908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1373	Open in IMG/M
3300009090\|Ga0099827_11739568	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M
3300009137\|Ga0066709_102508577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	695	Open in IMG/M
3300009137\|Ga0066709_104702162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300009162\|Ga0075423_12036930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	622	Open in IMG/M
3300009162\|Ga0075423_13169736	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009610\|Ga0105340_1003819	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6271	Open in IMG/M
3300009821\|Ga0105064_1140073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300010303\|Ga0134082_10001040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9794	Open in IMG/M
3300010304\|Ga0134088_10029025	All Organisms → cellular organisms → Bacteria	2486	Open in IMG/M
3300010322\|Ga0134084_10028287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1554	Open in IMG/M
3300010322\|Ga0134084_10252995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300010325\|Ga0134064_10392067	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300010326\|Ga0134065_10170425	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	772	Open in IMG/M
3300010326\|Ga0134065_10258948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	652	Open in IMG/M
3300010335\|Ga0134063_10687171	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300010336\|Ga0134071_10147596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1142	Open in IMG/M
3300010336\|Ga0134071_10520192	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300010337\|Ga0134062_10018768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2624	Open in IMG/M
3300010337\|Ga0134062_10055638	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1621	Open in IMG/M
3300010337\|Ga0134062_10275836	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	789	Open in IMG/M
3300011438\|Ga0137451_1154490	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300012198\|Ga0137364_10743007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	741	Open in IMG/M
3300012199\|Ga0137383_10522613	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	869	Open in IMG/M
3300012207\|Ga0137381_11485209	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300012208\|Ga0137376_10113947	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300012211\|Ga0137377_10220839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1820	Open in IMG/M
3300012211\|Ga0137377_11031745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	753	Open in IMG/M
3300012349\|Ga0137387_10582457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	812	Open in IMG/M
3300012351\|Ga0137386_10148869	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300012355\|Ga0137369_10730909	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300012360\|Ga0137375_10321985	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1387	Open in IMG/M
3300012532\|Ga0137373_11119001	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012922\|Ga0137394_11602409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300012927\|Ga0137416_10107663	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300012972\|Ga0134077_10122035	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1023	Open in IMG/M
3300012976\|Ga0134076_10040940	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1723	Open in IMG/M
3300014150\|Ga0134081_10220285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	652	Open in IMG/M
3300014157\|Ga0134078_10047982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1467	Open in IMG/M
3300017654\|Ga0134069_1216100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300017657\|Ga0134074_1230725	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	662	Open in IMG/M
3300018072\|Ga0184635_10351924	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300018084\|Ga0184629_10719724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300018433\|Ga0066667_10783089	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	809	Open in IMG/M
3300018482\|Ga0066669_10233469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1439	Open in IMG/M
3300018482\|Ga0066669_11080630	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	724	Open in IMG/M
3300019882\|Ga0193713_1007523	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3362	Open in IMG/M
3300020022\|Ga0193733_1119263	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	730	Open in IMG/M
3300021081\|Ga0210379_10045046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1741	Open in IMG/M
3300021086\|Ga0179596_10039376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1890	Open in IMG/M
3300024330\|Ga0137417_1021775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3046	Open in IMG/M
3300024330\|Ga0137417_1021776	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3166	Open in IMG/M
3300025318\|Ga0209519_10184102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1233	Open in IMG/M
3300025326\|Ga0209342_10060746	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3556	Open in IMG/M
3300025885\|Ga0207653_10049071	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1400	Open in IMG/M
3300025917\|Ga0207660_10005169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8483	Open in IMG/M
3300025929\|Ga0207664_10717810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	899	Open in IMG/M
3300026005\|Ga0208285_1017799	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300026075\|Ga0207708_11012268	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300026305\|Ga0209688_1049809	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300026306\|Ga0209468_1130381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	722	Open in IMG/M
3300026307\|Ga0209469_1095604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	840	Open in IMG/M
3300026313\|Ga0209761_1285285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	587	Open in IMG/M
3300026324\|Ga0209470_1078500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1517	Open in IMG/M
3300026326\|Ga0209801_1005156	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7242	Open in IMG/M
3300026326\|Ga0209801_1236546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	705	Open in IMG/M
3300026327\|Ga0209266_1075161	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1557	Open in IMG/M
3300026329\|Ga0209375_1215419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	703	Open in IMG/M
3300026331\|Ga0209267_1024813	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2946	Open in IMG/M
3300026334\|Ga0209377_1228274	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300026335\|Ga0209804_1048187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2089	Open in IMG/M
3300026527\|Ga0209059_1099905	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1182	Open in IMG/M
3300026538\|Ga0209056_10098892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2387	Open in IMG/M
3300027738\|Ga0208989_10197365	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	667	Open in IMG/M
3300028536\|Ga0137415_10174304	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1978	Open in IMG/M
3300028719\|Ga0307301_10163983	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300028811\|Ga0307292_10090536	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1193	Open in IMG/M
3300028884\|Ga0307308_10255032	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300031720\|Ga0307469_10209756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1529	Open in IMG/M
3300031720\|Ga0307469_10539605	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300031962\|Ga0307479_10229934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1829	Open in IMG/M
3300031962\|Ga0307479_10256303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1728	Open in IMG/M
3300032174\|Ga0307470_10031942	All Organisms → cellular organisms → Bacteria	2514	Open in IMG/M
3300032180\|Ga0307471_100640351	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1224	Open in IMG/M
3300033407\|Ga0214472_10812484	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	840	Open in IMG/M
3300033811\|Ga0364924_099524	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300033815\|Ga0364946_140432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	555	Open in IMG/M
3300034178\|Ga0364934_0404904	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.49%
Host-Associated	Host-Associated	4.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.98%
Aquatic	Environmental → Aquatic	4.51%
Plants	Host-Associated → Plants	4.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.51%
Sediment	Environmental → Aquatic → Sediment	3.76%
Floodplain	Environmental → Terrestrial → Floodplain	2.26%
Freshwater	Environmental → Aquatic → Freshwater	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.69%
Loam	Environmental → Terrestrial → Soil → Loam	9.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Sand	Environmental → Terrestrial → Soil → Sand	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.26%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.02%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.76%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.26%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.50%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.75%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005880	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011424	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026005	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10535592	3300002557	Grasslands Soil	MVXRSLGVALWSLVGLLACXLGALDALVGTHAGRTLLARVGSAAIQ
JGI25389J43894_10718482	3300002916	Grasslands Soil	MVRRSLGVALWTLAGLLACFLGALASLVGTDAGRALLTRVTAAALHQVFTGTVEIGDVG
Ga0066680_100625731	3300005174	Soil	MVRRSLGVALWMIVGLLACFLGALSALVGTGAGRALLARVMESALA
Ga0066680_106101261	3300005174	Soil	MRRSLGVALWSLVGLLACFLGALNALVGTHAGRTLLALVASTVVEGAVN
Ga0066688_106083641	3300005178	Soil	MVRRSLGVALWMLAGLLACFLGALGSLVGTDAGRALLTRVTAGALHQVFTG
Ga0066675_104654661	3300005187	Soil	MVRRSLGVALWMLAGLLACFLGALASLVGTDAGRALLTRVT
Ga0065705_109230181	3300005294	Switchgrass Rhizosphere	MVRRSLGVALWSLVGLLACFLGALNGLVGTRAGRSLLARIA
Ga0070713_1008934631	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRSLGAALWTLVGLLAGFLGALSSLVGTEAGRDLLTRVTEGGLRQVFTGTVEIG
Ga0070705_1016242812	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEGALRQVFTGTVEIG
Ga0066682_100296941	3300005450	Soil	LWTLVGLLAGFLGALSSLVGTGAGRSLLARVSEGALQHVF
Ga0070707_1002357162	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEGALRQV
Ga0070699_1005079701	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRRSLGAALWTLVGLLACFLGALNALVGTHAGRTLLARVASSVVEGA
Ga0070699_1017709761	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEGALRQ
Ga0070704_1001734342	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTLLARVASS
Ga0066661_105331341	3300005554	Soil	MVRRSLGVALWGVVGLLAVSLGALSALIGTGAGRTLVARAAEGALRQVFTG
Ga0066707_109407622	3300005556	Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGALHQVFTGTMEI
Ga0066704_100178991	3300005557	Soil	MVRRSLGVALWMIVGLLACFLGALSALVGTGAGRGLLARVMESALA
Ga0066704_107452771	3300005557	Soil	MRRSLGVALWTLVGLVACVFGALSALVGTHRGRALLARAAEAGLKRVF
Ga0066670_102953952	3300005560	Soil	MVRRSLGVALWMIVGLLACFLGALSALVGTGAGRALL
Ga0066708_109728722	3300005576	Soil	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTL
Ga0066691_104323582	3300005586	Soil	MVRRSLGVALWMLAGLLACFLGALASLVGTDAGRALLTRVTA
Ga0066706_100776971	3300005598	Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTL
Ga0075298_10258332	3300005880	Rice Paddy Soil	LIRRSLGAALWFLAGLLACFLGALASLTGTGAGRTLLARSATRALA
Ga0066651_101742512	3300006031	Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEG
Ga0066651_104988231	3300006031	Soil	MRRSLGVALWTLVGLLACFLGALNALVGTRAGRTLLARVAST
Ga0066656_100695561	3300006034	Soil	MVRRSLGVALWMIVGLLACFLGALSALVGTGAGRALLARVTESALARVFTGSI
Ga0079222_101173012	3300006755	Agricultural Soil	MVRRSLGAALWMLVGLVACFLGALSSLVGTGAGRTLLARVSEGALRRCSLAQ*
Ga0066659_102639161	3300006797	Soil	MVRRSLGVALWMLAGLLASFLGALASLVGTDAGRALLTRVTAGALHQVFTGTIEI
Ga0066659_107119301	3300006797	Soil	MIRRSLGAALWTLVALLAGFLGALSSLVGTGAGRALLARVSEGALRQAFTGTVEI
Ga0079221_101796171	3300006804	Agricultural Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLAR
Ga0079221_116805811	3300006804	Agricultural Soil	VRRSLAVLLWIIAGLLACFLGTLSGLVNTAAGRALLGA
Ga0075425_1016130781	3300006854	Populus Rhizosphere	MIRRSLGVALWSLVGLLACLLGALNALVGTRAGRT
Ga0075424_1023287862	3300006904	Populus Rhizosphere	MIRRSLGVALWSLVGLLACLLGALNGLVATRAGRALLARVGSAAVA
Ga0075436_1001184812	3300006914	Populus Rhizosphere	MRRSLGVALWSLVGLLACFLGALNALVGTHAGRTM
Ga0075436_1002443981	3300006914	Populus Rhizosphere	MVRRSLGVALWTIVGLLACFLGALSALVGTGAGRSLLARVAESSL
Ga0099794_106420482	3300007265	Vadose Zone Soil	MVRRSLGVALWILAGLLACFLGALASLVGTGAGRALL
Ga0066710_1020606691	3300009012	Grasslands Soil	MVRRSLGVALWMIVGLLACFLGALSALVGTGAGRALLARVMESALARVFTG
Ga0099828_111646871	3300009089	Vadose Zone Soil	MVRRSLGVALWSVVGLLACFLGALSALVGTEAGRTLLARTAEGALQQVF
Ga0099828_115847281	3300009089	Vadose Zone Soil	MVRRSLGVALWTVVGLLACLLGALSALVGTGAGRTLLARVTENALGRVFTGSVEVG
Ga0099827_101058012	3300009090	Vadose Zone Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALL
Ga0099827_102939082	3300009090	Vadose Zone Soil	MRRSLGVALWSLVGLLACFLGALNALVGTRAGRTLLARVASSVV
Ga0099827_117395682	3300009090	Vadose Zone Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEGA
Ga0066709_1025085772	3300009137	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGALHQVFTGTMEIG
Ga0066709_1047021622	3300009137	Grasslands Soil	VRRSLGVALWTLVGLVACVFGALSALVGTHRGRALLARA
Ga0075423_120369301	3300009162	Populus Rhizosphere	MVRRSLGAALWSLVGLFACFLGGLSALVGTGSGRALLARIASRVVAGAI
Ga0075423_131697361	3300009162	Populus Rhizosphere	MVRRSLGVALWSLVGLLACFLGALNGLVGTRAGRALLS
Ga0105340_10038196	3300009610	Soil	MVRHSLAAALWLVVGLLASFLGALSALVGTGAGRQLVTRVATGALRQ
Ga0105064_11400732	3300009821	Groundwater Sand	MIRRSLGVALWSLVGLLACFLGALNALVGTRAGRTMLARVASAAVE
Ga0134082_1000104010	3300010303	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGA
Ga0134088_100290251	3300010304	Grasslands Soil	MVRRSLGVALWMIVGLLACFLGALSALVGTGAGRGLLARVMESALAQVFTG
Ga0134084_100282872	3300010322	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGALHQVF
Ga0134084_102529951	3300010322	Grasslands Soil	MVRRSLGVALWMLAGLLACFLGALASLVGTDAGRALLTRVTAGALHQ
Ga0134064_103920671	3300010325	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSE
Ga0134065_101704251	3300010326	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRAL
Ga0134065_102589482	3300010326	Grasslands Soil	MRRSLGVALWTLVGLVACVLGALSALVGTHRGRALLARAA
Ga0134111_101540801	3300010329	Grasslands Soil	MRRSLGVALWSLVGLLACFLGALNALVGTHAGRTLLARVASAAVESAV
Ga0134063_106871712	3300010335	Grasslands Soil	MVRRSLGVALWMLAGLLACFLGALASLVGTDAGRALLTRVTAGALHQVF
Ga0134071_101475962	3300010336	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEGALRQVF
Ga0134071_105201922	3300010336	Grasslands Soil	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTLLAR
Ga0134062_100187683	3300010337	Grasslands Soil	MVRRSLGVALWMLAGLLACFLGALASLVGTDAGRALLTRVTVGALHQVFTGTIEVGDVGG
Ga0134062_100556382	3300010337	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGALRQVFTGRAE
Ga0134062_102758361	3300010337	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGALHQV
Ga0137439_11357371	3300011424	Soil	MRRSLGVALWSLVGLLACFLGALNALVGTRAGRTLLARLGSAAIESAVA
Ga0137451_11544901	3300011438	Soil	MVRRSLGVALWSLVGLLACFLGALNGLVGTRAGRALLARIASNAVERSIS
Ga0137364_107430072	3300012198	Vadose Zone Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVS
Ga0137383_105226131	3300012199	Vadose Zone Soil	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTLLARVASTVVEGA
Ga0137382_100624412	3300012200	Vadose Zone Soil	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTLLARVASTVVEGAVD
Ga0137381_114852092	3300012207	Vadose Zone Soil	MRRSLGVALWSLVGLLACFLGALNGLVGTRAGRTLLARVAS
Ga0137376_101139472	3300012208	Vadose Zone Soil	MRRSLGVALWTLVGLLACFLGALNALVGTRAGRTMLARVASTVVE
Ga0137377_102208392	3300012211	Vadose Zone Soil	MIRRSLGVALWSLVGLLACFLGALNALVGTHAGRSLLA
Ga0137377_110317452	3300012211	Vadose Zone Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLA
Ga0137387_105824571	3300012349	Vadose Zone Soil	MIRRSLGAALWTLVGLRAGFLGALSSLVGTGAGRALLAR
Ga0137386_101488692	3300012351	Vadose Zone Soil	MRRSLGVALWSLVGLLACFLGALNALVGTRAGRTLLARVASSVVESG
Ga0137369_107309091	3300012355	Vadose Zone Soil	MRRSLGVALWTLVGLLACFLGALNALVGTRAGRTLLARVASTVVEGA
Ga0137375_103219851	3300012360	Vadose Zone Soil	MFRRSLGVALWSLVGLLACFLGALNGLVGTRAGRSL
Ga0137373_111190012	3300012532	Vadose Zone Soil	MVRRSLGAALWSLVGLLACFLGALNGLVGTHAGRSLLARVASSVA
Ga0137394_116024091	3300012922	Vadose Zone Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSE
Ga0137416_101076632	3300012927	Vadose Zone Soil	MRRSLGVALWSLVGLLACFLGALNALVGTEAGRTLLA
Ga0134077_101220352	3300012972	Grasslands Soil	MRRSLGVALWTLVGLVACVFGALSALVGTHRGRALLARAAE
Ga0134076_100409401	3300012976	Grasslands Soil	VRRSLGVALWTLAGLVACVFGALSALVGTHRGRALLA
Ga0134081_102202851	3300014150	Grasslands Soil	MVRRSLGVALWMIVGLLACFLGALSALVGTGAGRALLARVMENALAQV
Ga0134078_100479821	3300014157	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEGALRQVFTG
Ga0134069_12161002	3300017654	Grasslands Soil	MRRSLGVALWSLVGLLACFLGALNALVGTHAGRTLLARV
Ga0134074_12307251	3300017657	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGALHQVFTGT
Ga0184635_103519242	3300018072	Groundwater Sediment	MFRRSLGVALWSLVGLLACFLGALNGLVGTRAGRSLLARIASNAI
Ga0184629_107197241	3300018084	Groundwater Sediment	MRRSLGVALWSLVGLLACFLGALNALVGTRAGRTMLARV
Ga0066667_107830892	3300018433	Grasslands Soil	MVRRSLGVALWMLAGLLACFLGALASLVGTDAGRAL
Ga0066669_102334691	3300018482	Grasslands Soil	MVRRSLGVALWMLAGLLACFLGALASLVGTDAGRALLTRVTAGG
Ga0066669_110806302	3300018482	Grasslands Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGALRQAFTG
Ga0193713_10075233	3300019882	Soil	MVRRSLGVALWSLVGLLACFLGALNGLVGTRAGRSLLA
Ga0193733_11192632	3300020022	Soil	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTLLARVASTVV
Ga0210379_100450461	3300021081	Groundwater Sediment	MVRRSLGVFLWSLVGLLAVFLGALSSLVGTGAGRALLARLSAAALETVVAGK
Ga0179596_100393762	3300021086	Vadose Zone Soil	MFRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARV
Ga0137417_10217753	3300024330	Vadose Zone Soil	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTLLARVASTVVEG
Ga0137417_10217761	3300024330	Vadose Zone Soil	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTLLARVAST
Ga0209519_101841021	3300025318	Soil	MVRRSLGVALWSLVGLLACFLGALNGLVGTRAGRSLL
Ga0209342_100607463	3300025326	Soil	MVRRSLGVALWSIAGLLACFLGALSALVGTGAGRQLLARVAESSLGHVF
Ga0207653_100490711	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTLL
Ga0207660_100051698	3300025917	Corn Rhizosphere	MRRSLGVALWSMVGLLACFLGALNALVGTRAGRTMMARIASG
Ga0207664_107178101	3300025929	Agricultural Soil	MVRRSLGAALWTLVGLLAGFLGALSSLVGTEAGRDLLTRVTEGGLR
Ga0208285_10177991	3300026005	Rice Paddy Soil	LIRRSLGAALWFLAGLLACFLGALASLTGTGAGRTLLARSATRALANV
Ga0207708_110122682	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRRSLGVALWSMVGLLACFLGALNALVGTRAGRTMMARIASGAV
Ga0209235_12477781	3300026296	Grasslands Soil	MIRRSLGVALWSLVGLLACFLGALNALVGTQAGRTLLARIASAAVQNA
Ga0209688_10498091	3300026305	Soil	MRRSLGVALWTLVGLLACFLGALNALVATHAGRTLLARL
Ga0209468_11303811	3300026306	Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEGALHQVFTGTA
Ga0209469_10956042	3300026307	Soil	MVRRSLGVALWMIVGLLACFLGALSALVGTGAGRALLARVMENALAQVFTG
Ga0209761_12852851	3300026313	Grasslands Soil	MRRSLGVALWTLVGLVACVFGALSALVGTHRGRALLARAA
Ga0209686_12142141	3300026315	Soil	MRRSLGVALWTLVGLLACFLGALNALVGTHAGRTLLARVASTVVEGAVHGS
Ga0209470_10785001	3300026324	Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEG
Ga0209801_10051561	3300026326	Soil	MVRRSLGVALWMLAGLLASFLGALASLVGTDAGRALLTRVTAGALHQVFTGT
Ga0209801_12365462	3300026326	Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGAL
Ga0209266_10751612	3300026327	Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLA
Ga0209375_12154192	3300026329	Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGALHQVFTGTMEIGD
Ga0209267_10248133	3300026331	Soil	MVRRSLGAALWTLVGLLAVFLGALSSLVGTEAGRQLLARVTERGLRQ
Ga0209377_12282741	3300026334	Soil	MRRSLGVALWSLVGLLACFLGALNGLVGTHAGRTLLARVASTVVQSA
Ga0209804_10481871	3300026335	Soil	MVRRSLGVALWMLAGLLACFLGALGSLVGTDAGRALLTRVTAGALHQVFTGTIEIGDV
Ga0209059_10999052	3300026527	Soil	MVRRSLGVALWMLAGLLACFLGALGSLVGTDAGRALLTRVTAGALHQVFTGTIEIGDVGG
Ga0209056_100988921	3300026538	Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRALLARVSEGALH
Ga0208989_101973652	3300027738	Forest Soil	MIRRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEGALR
Ga0137415_101743041	3300028536	Vadose Zone Soil	MISRSLGAALWTLVGLLAGFLGALSSLVGTGAGRTLLARVSEG
Ga0307301_101639831	3300028719	Soil	MRRSLGVALWTLVGLLACFLGALNALVGTRAGRTMLARVAGT
Ga0307292_100905361	3300028811	Soil	MRRSLGVALWTLVGLLACFLGAMNALVGTHAGRTLLA
Ga0307308_102550321	3300028884	Soil	MRRSLGVALWTLVGLLACFLGALNALVGTRAGRTMLARVASTVVEGA
Ga0307469_102097561	3300031720	Hardwood Forest Soil	MIRRSLGVALWSLVGLLACLLGALNALVGTRAGRTLLAQVASAAAEGVVS
Ga0307469_105396051	3300031720	Hardwood Forest Soil	MMRRSLSVALWSLVGLLACFLGALNALVGTRAGRTLLARIASSAVNS
Ga0307479_102299342	3300031962	Hardwood Forest Soil	MVRRSLGVALWSLAGLLACFLGALASLVGTSAGRAL
Ga0307479_102563031	3300031962	Hardwood Forest Soil	MVRRSLGVALWMLAGLLASFLGALASLVGTDAGRALLTRVTAGALHQVFT
Ga0307470_100319421	3300032174	Hardwood Forest Soil	MVRRSLGAALWTLVGLLAGFLGALSSLVGTEAGRDLLARVTEGGLRQ
Ga0307471_1006403512	3300032180	Hardwood Forest Soil	MIRRSLGVALWSLVGLLACLLGALNALVGTRAGRTLL
Ga0214472_108124841	3300033407	Soil	MVRRSLGVALWSLAGLLACFLGALNGLVGTRAGRSLLAR
Ga0364924_099524_3_140	3300033811	Sediment	MVRRSLGAALWTLVGVLACFLGGLSALVGTPAGRALVARVLQATLE
Ga0364946_140432_422_553	3300033815	Sediment	MVRRSLGAALWTLVGVLACFLGGLSALVGTPAGRALVARVLQAT
Ga0364934_0404904_364_516	3300034178	Sediment	MVRRSLGAMLWFLAGLLACFLGVLAGLTGTGAGRRLLANAASAALEGVIDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059858

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences