Metagenome Family F059802

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059802
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	58 residues
Representative Sequence	LVVTDQVDKNFIADLLVLLVILVVVVGGFALLHTPSILLGGGLALVVAVAAEFAWSR
Number of Associated Samples	90
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	58.65 %
% of genes near scaffold ends (potentially truncated)	20.30 %
% of genes from short scaffolds (< 2000 bps)	65.41 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (92.481 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (33.083 % of family members)
Environment Ontology (ENVO)	Unclassified (65.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.173 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 78.95% β-sheet: 0.00% Coil/Unstructured: 21.05%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01619	Pro_dh	45.11
PF03745	DUF309	11.28
PF00248	Aldo_ket_red	8.27
PF00465	Fe-ADH	7.52
PF04209	HgmA_C	3.01
PF01557	FAA_hydrolase	1.50
PF14696	Glyoxalase_5	1.50
PF01061	ABC2_membrane	0.75
PF00416	Ribosomal_S13	0.75
PF09861	Lar_N	0.75
PF14528	LAGLIDADG_3	0.75
PF00127	Copper-bind	0.75
PF01791	DeoC	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0506	Proline dehydrogenase	Amino acid transport and metabolism [E]	45.11
COG1547	Predicted metal-dependent hydrolase	Function unknown [S]	11.28
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	7.52
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	7.52
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	7.52
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	7.52
COG3508	Homogentisate 1,2-dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.01
COG0099	Ribosomal protein S13	Translation, ribosomal structure and biogenesis [J]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	92.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.52 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10027001	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300002558\|JGI25385J37094_10037699	All Organisms → cellular organisms → Archaea	1677	Open in IMG/M
3300002558\|JGI25385J37094_10058678	All Organisms → cellular organisms → Archaea	1264	Open in IMG/M
3300002558\|JGI25385J37094_10111882	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	791	Open in IMG/M
3300002560\|JGI25383J37093_10060422	All Organisms → cellular organisms → Archaea	1201	Open in IMG/M
3300002561\|JGI25384J37096_10000144	All Organisms → cellular organisms → Archaea	17106	Open in IMG/M
3300002561\|JGI25384J37096_10027199	All Organisms → cellular organisms → Archaea	2231	Open in IMG/M
3300002562\|JGI25382J37095_10030595	All Organisms → cellular organisms → Archaea	2111	Open in IMG/M
3300002562\|JGI25382J37095_10080637	All Organisms → cellular organisms → Archaea	1196	Open in IMG/M
3300002908\|JGI25382J43887_10029189	All Organisms → cellular organisms → Archaea	2974	Open in IMG/M
3300002908\|JGI25382J43887_10086992	All Organisms → cellular organisms → Archaea	1670	Open in IMG/M
3300002912\|JGI25386J43895_10016484	All Organisms → cellular organisms → Archaea	2154	Open in IMG/M
3300002912\|JGI25386J43895_10180289	All Organisms → cellular organisms → Archaea	530	Open in IMG/M
3300002916\|JGI25389J43894_1010419	All Organisms → cellular organisms → Archaea	1549	Open in IMG/M
3300005167\|Ga0066672_10069096	All Organisms → cellular organisms → Archaea	2082	Open in IMG/M
3300005167\|Ga0066672_10331296	All Organisms → cellular organisms → Archaea	992	Open in IMG/M
3300005167\|Ga0066672_10361434	All Organisms → cellular organisms → Archaea	948	Open in IMG/M
3300005167\|Ga0066672_10459639	All Organisms → cellular organisms → Archaea	830	Open in IMG/M
3300005174\|Ga0066680_10028642	All Organisms → cellular organisms → Archaea	3128	Open in IMG/M
3300005174\|Ga0066680_10561045	All Organisms → cellular organisms → Archaea	717	Open in IMG/M
3300005176\|Ga0066679_10241715	All Organisms → cellular organisms → Archaea	1161	Open in IMG/M
3300005176\|Ga0066679_10795012	All Organisms → cellular organisms → Archaea	604	Open in IMG/M
3300005177\|Ga0066690_10038952	All Organisms → cellular organisms → Archaea	2833	Open in IMG/M
3300005177\|Ga0066690_10351231	All Organisms → cellular organisms → Archaea	1000	Open in IMG/M
3300005178\|Ga0066688_10105405	All Organisms → cellular organisms → Archaea	1728	Open in IMG/M
3300005179\|Ga0066684_10125965	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1600	Open in IMG/M
3300005179\|Ga0066684_10235956	All Organisms → cellular organisms → Archaea	1195	Open in IMG/M
3300005180\|Ga0066685_10559424	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	788	Open in IMG/M
3300005186\|Ga0066676_10364413	All Organisms → cellular organisms → Archaea	969	Open in IMG/M
3300005187\|Ga0066675_10408348	All Organisms → cellular organisms → Archaea	1004	Open in IMG/M
3300005468\|Ga0070707_100003956	All Organisms → cellular organisms → Bacteria	13953	Open in IMG/M
3300005518\|Ga0070699_100585123	All Organisms → cellular organisms → Archaea	1017	Open in IMG/M
3300005552\|Ga0066701_10037534	All Organisms → cellular organisms → Archaea	2576	Open in IMG/M
3300005554\|Ga0066661_10202606	All Organisms → cellular organisms → Archaea	1228	Open in IMG/M
3300005555\|Ga0066692_10063484	All Organisms → cellular organisms → Archaea	2094	Open in IMG/M
3300005555\|Ga0066692_10557799	All Organisms → cellular organisms → Archaea	723	Open in IMG/M
3300005557\|Ga0066704_10001786	All Organisms → cellular organisms → Bacteria	9580	Open in IMG/M
3300005557\|Ga0066704_10008121	All Organisms → cellular organisms → Bacteria	5628	Open in IMG/M
3300005557\|Ga0066704_10600802	All Organisms → cellular organisms → Archaea	708	Open in IMG/M
3300005559\|Ga0066700_10651859	All Organisms → cellular organisms → Archaea	729	Open in IMG/M
3300005568\|Ga0066703_10537546	All Organisms → cellular organisms → Archaea	689	Open in IMG/M
3300005569\|Ga0066705_10313472	All Organisms → cellular organisms → Archaea	993	Open in IMG/M
3300005575\|Ga0066702_10089109	All Organisms → cellular organisms → Archaea	1741	Open in IMG/M
3300005598\|Ga0066706_10000109	All Organisms → cellular organisms → Archaea	18598	Open in IMG/M
3300006796\|Ga0066665_11068573	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	616	Open in IMG/M
3300006800\|Ga0066660_10124516	All Organisms → cellular organisms → Archaea	1869	Open in IMG/M
3300007258\|Ga0099793_10001873	All Organisms → cellular organisms → Bacteria	6853	Open in IMG/M
3300007258\|Ga0099793_10707508	All Organisms → cellular organisms → Archaea	508	Open in IMG/M
3300007265\|Ga0099794_10281584	All Organisms → cellular organisms → Archaea	860	Open in IMG/M
3300009012\|Ga0066710_102236537	All Organisms → cellular organisms → Archaea	797	Open in IMG/M
3300009038\|Ga0099829_10111409	All Organisms → cellular organisms → Archaea	2143	Open in IMG/M
3300009038\|Ga0099829_10453713	All Organisms → cellular organisms → Archaea	1062	Open in IMG/M
3300009038\|Ga0099829_11735899	All Organisms → cellular organisms → Archaea	512	Open in IMG/M
3300009088\|Ga0099830_10277213	All Organisms → cellular organisms → Archaea	1333	Open in IMG/M
3300009088\|Ga0099830_10323468	All Organisms → cellular organisms → Archaea	1235	Open in IMG/M
3300009090\|Ga0099827_11072814	All Organisms → cellular organisms → Archaea	699	Open in IMG/M
3300010303\|Ga0134082_10201747	All Organisms → cellular organisms → Archaea	814	Open in IMG/M
3300010304\|Ga0134088_10071340	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1615	Open in IMG/M
3300010304\|Ga0134088_10423308	All Organisms → cellular organisms → Archaea	651	Open in IMG/M
3300010323\|Ga0134086_10259886	All Organisms → cellular organisms → Archaea	663	Open in IMG/M
3300010333\|Ga0134080_10527543	All Organisms → cellular organisms → Archaea	565	Open in IMG/M
3300010335\|Ga0134063_10050731	All Organisms → cellular organisms → Archaea	1811	Open in IMG/M
3300010337\|Ga0134062_10477025	All Organisms → cellular organisms → Archaea	623	Open in IMG/M
3300011271\|Ga0137393_11437614	All Organisms → cellular organisms → Archaea	579	Open in IMG/M
3300012096\|Ga0137389_10866776	All Organisms → cellular organisms → Archaea	775	Open in IMG/M
3300012199\|Ga0137383_10039896	All Organisms → cellular organisms → Archaea	3330	Open in IMG/M
3300012199\|Ga0137383_10373629	All Organisms → cellular organisms → Archaea	1044	Open in IMG/M
3300012201\|Ga0137365_10140293	All Organisms → cellular organisms → Archaea	1817	Open in IMG/M
3300012203\|Ga0137399_10187500	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1673	Open in IMG/M
3300012203\|Ga0137399_10213706	All Organisms → cellular organisms → Archaea	1570	Open in IMG/M
3300012207\|Ga0137381_10127919	All Organisms → cellular organisms → Archaea	2174	Open in IMG/M
3300012349\|Ga0137387_10552149	All Organisms → cellular organisms → Archaea	836	Open in IMG/M
3300012349\|Ga0137387_10556767	All Organisms → cellular organisms → Archaea	832	Open in IMG/M
3300012355\|Ga0137369_10368752	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1044	Open in IMG/M
3300012356\|Ga0137371_10000295	All Organisms → cellular organisms → Archaea	35037	Open in IMG/M
3300012357\|Ga0137384_11399452	All Organisms → cellular organisms → Archaea	548	Open in IMG/M
3300012358\|Ga0137368_10319427	All Organisms → cellular organisms → Archaea	1043	Open in IMG/M
3300012359\|Ga0137385_10090412	All Organisms → cellular organisms → Archaea	2715	Open in IMG/M
3300012360\|Ga0137375_10253715	All Organisms → cellular organisms → Archaea	1622	Open in IMG/M
3300012927\|Ga0137416_10012403	All Organisms → cellular organisms → Bacteria	5170	Open in IMG/M
3300012972\|Ga0134077_10311880	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	663	Open in IMG/M
3300012977\|Ga0134087_10218067	All Organisms → cellular organisms → Archaea	861	Open in IMG/M
3300015241\|Ga0137418_10543185	All Organisms → cellular organisms → Archaea	922	Open in IMG/M
3300015358\|Ga0134089_10392497	All Organisms → cellular organisms → Archaea	591	Open in IMG/M
3300017656\|Ga0134112_10343445	All Organisms → cellular organisms → Archaea	607	Open in IMG/M
3300018431\|Ga0066655_10033500	All Organisms → cellular organisms → Archaea	2524	Open in IMG/M
3300018431\|Ga0066655_10413625	All Organisms → cellular organisms → Archaea	890	Open in IMG/M
3300018431\|Ga0066655_10563886	All Organisms → cellular organisms → Archaea	763	Open in IMG/M
3300018431\|Ga0066655_11003963	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	577	Open in IMG/M
3300018433\|Ga0066667_10524667	All Organisms → cellular organisms → Archaea	979	Open in IMG/M
3300018468\|Ga0066662_10027415	All Organisms → cellular organisms → Archaea	3322	Open in IMG/M
3300018468\|Ga0066662_10572049	All Organisms → cellular organisms → Archaea	1050	Open in IMG/M
3300021046\|Ga0215015_10337069	All Organisms → cellular organisms → Archaea	1305	Open in IMG/M
3300021046\|Ga0215015_10741182	All Organisms → cellular organisms → Archaea	3132	Open in IMG/M
3300021088\|Ga0210404_10003005	All Organisms → cellular organisms → Bacteria	6883	Open in IMG/M
3300024330\|Ga0137417_1236104	All Organisms → cellular organisms → Archaea	716	Open in IMG/M
3300025922\|Ga0207646_10084437	All Organisms → cellular organisms → Archaea	2841	Open in IMG/M
3300026295\|Ga0209234_1014634	All Organisms → cellular organisms → Archaea	2969	Open in IMG/M
3300026296\|Ga0209235_1014993	All Organisms → cellular organisms → Archaea	4234	Open in IMG/M
3300026296\|Ga0209235_1030822	All Organisms → cellular organisms → Archaea	2766	Open in IMG/M
3300026296\|Ga0209235_1045105	All Organisms → cellular organisms → Archaea	2162	Open in IMG/M
3300026297\|Ga0209237_1045139	All Organisms → cellular organisms → Archaea	2264	Open in IMG/M
3300026297\|Ga0209237_1054794	All Organisms → cellular organisms → Archaea	1978	Open in IMG/M
3300026297\|Ga0209237_1213649	All Organisms → cellular organisms → Archaea	606	Open in IMG/M
3300026298\|Ga0209236_1000991	All Organisms → cellular organisms → Archaea	16940	Open in IMG/M
3300026298\|Ga0209236_1090121	All Organisms → cellular organisms → Archaea	1401	Open in IMG/M
3300026309\|Ga0209055_1054104	All Organisms → cellular organisms → Archaea	1720	Open in IMG/M
3300026313\|Ga0209761_1023534	All Organisms → cellular organisms → Archaea	3805	Open in IMG/M
3300026325\|Ga0209152_10000576	All Organisms → cellular organisms → Archaea	16273	Open in IMG/M
3300026326\|Ga0209801_1012506	All Organisms → cellular organisms → Archaea	4348	Open in IMG/M
3300026326\|Ga0209801_1027390	All Organisms → cellular organisms → Archaea	2727	Open in IMG/M
3300026328\|Ga0209802_1000212	All Organisms → cellular organisms → Archaea	43724	Open in IMG/M
3300026328\|Ga0209802_1165772	All Organisms → cellular organisms → Archaea	910	Open in IMG/M
3300026331\|Ga0209267_1014970	All Organisms → cellular organisms → Bacteria	4042	Open in IMG/M
3300026371\|Ga0257179_1013203	All Organisms → cellular organisms → Archaea	891	Open in IMG/M
3300026530\|Ga0209807_1330826	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	518	Open in IMG/M
3300026536\|Ga0209058_1224598	All Organisms → cellular organisms → Archaea	705	Open in IMG/M
3300026552\|Ga0209577_10039925	All Organisms → cellular organisms → Archaea	4028	Open in IMG/M
3300027671\|Ga0209588_1045388	All Organisms → cellular organisms → Archaea	1421	Open in IMG/M
3300027671\|Ga0209588_1167863	All Organisms → cellular organisms → Archaea	691	Open in IMG/M
3300027748\|Ga0209689_1055741	All Organisms → cellular organisms → Archaea	2191	Open in IMG/M
3300027748\|Ga0209689_1096327	All Organisms → cellular organisms → Archaea	1536	Open in IMG/M
3300027748\|Ga0209689_1359391	All Organisms → cellular organisms → Archaea	557	Open in IMG/M
3300027748\|Ga0209689_1437701	All Organisms → cellular organisms → Archaea	501	Open in IMG/M
3300027846\|Ga0209180_10066097	All Organisms → cellular organisms → Archaea	2019	Open in IMG/M
3300027862\|Ga0209701_10057535	All Organisms → cellular organisms → Archaea	2481	Open in IMG/M
3300027875\|Ga0209283_10009518	All Organisms → cellular organisms → Bacteria	5721	Open in IMG/M
3300027875\|Ga0209283_10129398	All Organisms → cellular organisms → Archaea	1667	Open in IMG/M
3300028536\|Ga0137415_10011644	All Organisms → cellular organisms → Archaea	8730	Open in IMG/M
3300028536\|Ga0137415_10027558	All Organisms → cellular organisms → Bacteria	5603	Open in IMG/M
3300028673\|Ga0257175_1126388	All Organisms → cellular organisms → Archaea	511	Open in IMG/M
3300031820\|Ga0307473_10195582	All Organisms → cellular organisms → Archaea	1196	Open in IMG/M
3300032180\|Ga0307471_103690031	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.74%
Loam	Environmental → Terrestrial → Soil → Loam	2.26%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	57.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	33.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	24.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.50%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100270011	3300002558	Grasslands Soil	MSLRDGGLLVTDQVDKNFIADLLVLLVILVVVVGGFALLHAPSILLGGGLALVVAVAAEFAWSR*
JGI25385J37094_100376992	3300002558	Grasslands Soil	MDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVIAVAAEFVWSR*
JGI25385J37094_100586783	3300002558	Grasslands Soil	MKLRDGGLVVTDQVDKNFIADLLVLLVILVVVVGGFAFLHSPSILLGGGLALVVAVAAEFAWSR*
JGI25385J37094_101118822	3300002558	Grasslands Soil	VDKNFIADLLVLLVILIVVVGGFTLLHTTAILLGGGLALVVAVAAEFVWSR*
JGI25383J37093_100604222	3300002560	Grasslands Soil	MVATDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR*
JGI25384J37096_100001442	3300002561	Grasslands Soil	VVVTDQVDRNFIADLLVLLVILVVVVGGFALLHTTAILLGGGLALVVAAAAEFVWSR*
JGI25384J37096_100271992	3300002561	Grasslands Soil	MKLRXGGLVVTDQVDKNFIADLLVLLVILVVVVGGFAFLHSPSILLGGGLALVVAVAAEFAWSR*
JGI25382J37095_100305951	3300002562	Grasslands Soil	MNLENEGLVVTDQVDKNFIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR*
JGI25382J37095_100806371	3300002562	Grasslands Soil	VDKNFIADLLVLLVILVVVVGGFTLLHTTAILLGGGLALVVAVAAEFVWSR*
JGI25382J43887_100291895	3300002908	Grasslands Soil	MKLRAGGLVVTDQVDKNFIADLLVLLVILVVVVGGFAFLHSPSILLGGGLALVVAVAAEFAWSR*
JGI25382J43887_100869921	3300002908	Grasslands Soil	ILKNGEMVATDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR*
JGI25386J43895_100164844	3300002912	Grasslands Soil	MDQVDRNFIADLLVLLVILVVVVGGFALLHTTAILLGGGLALVVAAAAEFVWSR*
JGI25386J43895_101802892	3300002912	Grasslands Soil	GEVVTMDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVIAVAAEFVWSR*
JGI25389J43894_10104191	3300002916	Grasslands Soil	MDQVDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0066672_100690964	3300005167	Soil	MKLRDGGLVVTDQVDKNFIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR*
Ga0066672_103312961	3300005167	Soil	MRLRDGGLVVTDQVDRNFIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR*
Ga0066672_103614342	3300005167	Soil	LVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTSATLLGGGLALVVAVAAEFAWSR*
Ga0066672_104596392	3300005167	Soil	MRLGNEGVVVTDQVDKNFIADLLVLIVILVVVVGGFALLHSPSILLGGGLALVVAVAAEFAWSR*
Ga0066680_100286423	3300005174	Soil	MSLGDGGLVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR*
Ga0066680_105610451	3300005174	Soil	DQVDKNFIADLLVLLVILVVVVGGFTLLHTTAILLGGGLALVVAVAAEFVWSR*
Ga0066679_102417151	3300005176	Soil	MRLKENGKVVVTDQVDKNLIADLLVLVVILIVVVGGFAFLHTTSILLGGGLALVVAVAAEFVWSR*
Ga0066679_107950121	3300005176	Soil	MKLRDGGLVVTDQVDKNFIADLLVLIVILVVVVGGFALLHSPSILLGGVLALVVAVAAEFAWSR*
Ga0066690_100389524	3300005177	Soil	MDQTDKNFIADLLVLFVILVVVVGGFTLLRTPSILLGGGLALVVAVAAEFVWSR*
Ga0066690_103512312	3300005177	Soil	MDQVDKNFIADLLVLFVLLVVVVGGFALLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0066688_101054052	3300005178	Soil	MDQVDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVVAEFVWSR*
Ga0066684_101259651	3300005179	Soil	VVATDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0066684_102359561	3300005179	Soil	MVVLDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0066685_105594241	3300005180	Soil	MDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0066676_103644131	3300005186	Soil	DQVDKNFIADRLVLFVILVVVVGGFALLHTPSILLGGGLALVIAVAAEFAWSR*
Ga0066675_104083482	3300005187	Soil	VVATDQTDKNFIADLLVLFVILVVVVGGFTILHTPSILLGGGLALVVAVAAEFVWSR*
Ga0070707_1000039566	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDKNFIADLLVLLVILIVVIGSFALLHATAILLGGGLALVVAVAAEFAWSR*
Ga0070699_1005851232	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LIVTDQMDKNFIADLLVLLVILIVVIGSFALLHATAILLGGGLALVVAVAAEFAWSR*
Ga0066701_100375344	3300005552	Soil	DKNFIADLLVLLVILVVVVGGFAFLHSPSILLGGGLALVVAVAAEFAWSR*
Ga0066661_102026062	3300005554	Soil	MVAMDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0066692_100634841	3300005555	Soil	LLVTDQVDKNFIADLLVLLVILVVVVGGFALLHAPSILLGGGLALVVAVAAEFAWSR*
Ga0066692_105577992	3300005555	Soil	MRIRNRGLVVTDQVDKNFIADLLVLLVILMVVVGGFAFLHATAILVGGGLALVVAVAAEFAWSR*
Ga0066704_100017867	3300005557	Soil	LVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR*
Ga0066704_100081215	3300005557	Soil	LVVTDQVDKNFIADLLVLLVILVVVVGGFAFLHSPSILLGGGLALVVAVAAEFAWSR*
Ga0066704_106008022	3300005557	Soil	LVVTDQVDRNFIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR*
Ga0066700_106518592	3300005559	Soil	LVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTSAILLGGGLALVVAVAAEFAWSR*
Ga0066703_105375462	3300005568	Soil	MRLKENGKVVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR*
Ga0066705_103134722	3300005569	Soil	MDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWS
Ga0066702_100891094	3300005575	Soil	MVAMDQTDKNFIADLLVLFVILVVVVGGFTLLRTPSILLGGGLALVVAVAAEFVWSR*
Ga0066706_100001094	3300005598	Soil	LVVTDQVDKNFIADLLVLLVILMVVVGGFAFLHATAILVGGGLALVVAVAAEFAWSR*
Ga0066665_110685731	3300006796	Soil	MLSMDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGVGLALVVA
Ga0066660_101245163	3300006800	Soil	MVAMDQADKNFIADLLVLFVILVVVVGGFTLLRTPSILLGGGLALVVAVAAEFVWSR*
Ga0099793_100018736	3300007258	Vadose Zone Soil	MFREMLGNGGVVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTTSILLGGGLALIVAVAAEFVWSR*
Ga0099793_107075082	3300007258	Vadose Zone Soil	VVVTDQVDRNFIADLLVLLVILVVVVGGFALLHITAILLGGGLALVVAAAAEFVWSR*
Ga0099794_102815842	3300007265	Vadose Zone Soil	MRLRNGGVDVTDQVDKNFIADLLVLLVILVVVVGGFALLHTSAILLGGGLALVVAVAAEFAWSR*
Ga0066710_1022365371	3300009012	Grasslands Soil	VVATDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR
Ga0099829_101114093	3300009038	Vadose Zone Soil	LDKDFIADLLVLFIILIVVIGGFALLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0099829_104537131	3300009038	Vadose Zone Soil	MRLRDRGVVVTDQVDKNFIADLLVLLVILVVVVGGFAFLHATAILLGGGLALVVAVAAEFAWSR*
Ga0099829_117358992	3300009038	Vadose Zone Soil	VDKNFIADLLVLLVILVVVVGGFALLHTPSILLGGGLALVVA
Ga0099830_102772132	3300009088	Vadose Zone Soil	MVATDQTDKNFIADLLVLFVILIVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0099830_103234682	3300009088	Vadose Zone Soil	LRNGGLVVTDQLDKNLIADLLLMLVILVVVVGGFALLHAPAILLGGGLALVIVAVAEFVWSR*
Ga0099827_110728142	3300009090	Vadose Zone Soil	MNLGNRGLVVTDQVDKNFIADLLVLLVILVVVVGGFALLHTSAILLGGGLALVVAVAAEFAWSR*
Ga0134082_102017471	3300010303	Grasslands Soil	VVATDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEF
Ga0134088_100713401	3300010304	Grasslands Soil	VVATDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVW
Ga0134088_104233081	3300010304	Grasslands Soil	LPAEHSTSWAENGEVVASDQVDKNFIADLLVLFVILVVVVGGFALLHTPSILLGGGLALVIAVAAEFAWSR*
Ga0134086_102598862	3300010323	Grasslands Soil	MVVLDQTDKNFIADLLVLFVILVVVVGGFALLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0134080_105275431	3300010333	Grasslands Soil	MKLKNGEVVASDQVDKNLIADLLLLFVILVVVMGGFALLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0134063_100507311	3300010335	Grasslands Soil	VVATDQTDKNFIADLLVLLVILVVVVGGFTILHTPSILLGGGLALVVAVAAEF
Ga0134062_104770252	3300010337	Grasslands Soil	MVVLDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAE
Ga0137393_114376141	3300011271	Vadose Zone Soil	MDKNFIADLLVLLVILVVVVGGFALLHTSAILLGGGLALVVAVAAEFAWSR*
Ga0137389_108667761	3300012096	Vadose Zone Soil	VIATDQVDKNFIADLLVLLVILIVVVGGFAFLHVTAILLGGGLALVVAVAAEFAWSR*
Ga0137383_100398961	3300012199	Vadose Zone Soil	MRLRNRGVVVMDQVDKNFIADLLVLLVILVVVVAGFAFLHTTAILLGGGLALVVAVAAEFAWSR*
Ga0137383_103736291	3300012199	Vadose Zone Soil	MRIRNRGLVVTDQVDKNFIADLLVLLVILIVVVGGFAFLHATAILVGGGLALVVAVAAEFAWSR
Ga0137365_101402932	3300012201	Vadose Zone Soil	VVASDQVDKNLIADLLLLFVILVVVVGGFALLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0137399_101875002	3300012203	Vadose Zone Soil	MDQVDKNLIADLLVLLVILIVVVGGFALLHTTSILLGGGLALVVAVAAEYAWSR*
Ga0137399_102137063	3300012203	Vadose Zone Soil	MRLRNGGVVVTDQVDKNFIADLLVLLVILVVVVGGFALLHTSAILLGGGLALVVAVAAEFAWSR*
Ga0137381_101279191	3300012207	Vadose Zone Soil	VVASDQVDKNLIADLLLLFVILVVVVGGFAILHTPSILLGGGLALVVAVAAEFVWSR*
Ga0137387_105521492	3300012349	Vadose Zone Soil	ETFREMRLRNRGVVVMDQVDKNFIADLLVLLVILMVVVGGFAFLRATAILVGGGLALVVAVAAEFAWSR*
Ga0137387_105567671	3300012349	Vadose Zone Soil	AETFREMRLRNRGVVVTDQVDKNFIADLLVLLVILVVVVAGFAFLHATAILLGGGLALVVAVATEFAWSR*
Ga0137369_103687521	3300012355	Vadose Zone Soil	VVASDQVDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0137371_1000029541	3300012356	Vadose Zone Soil	MRIRNRGLVVTDQVDKNFIADLLVLLVILIVVVGGFAFLHATAILVGGGLALVVAVAAEFAWSR*
Ga0137384_113994522	3300012357	Vadose Zone Soil	MKLRDGGLVVTDQVDKNFIADLLVLLVILVVVVAGFAFLHATAILLGGGLALVV
Ga0137368_103194273	3300012358	Vadose Zone Soil	ENGEVVASDQVDKNLIADLLLLFVILVVVVGGFALLHTPSILLGGGLALVVAVAAEFVWSR*
Ga0137385_100904124	3300012359	Vadose Zone Soil	MKLRDGGLVVTDQVDKNFIADLLVLLVILVVVVGGFAFLHTPSILLGGGLALVVAVAAEFAWSR*
Ga0137375_102537152	3300012360	Vadose Zone Soil	VVASDQVDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLAIVVAVAAEFVWSR*
Ga0137416_100124036	3300012927	Vadose Zone Soil	MKLRNVRVAVTDQVDKNFIGDLLVLLVILVVVVGGFALLHTSAILLGGGLALVVAVAAEFAWSR*
Ga0134077_103118801	3300012972	Grasslands Soil	MDQVDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVVAEFVWS
Ga0134087_102180673	3300012977	Grasslands Soil	MVVLDQTDKNFIADLLVLLVILVVVVGGFTILHTPSILLGGGLALVVAVAAEFVWSR*
Ga0137418_105431852	3300015241	Vadose Zone Soil	MFREILGNGGVVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTTSILLGGGLALIVAVAAEFVWSR*
Ga0134089_103924971	3300015358	Grasslands Soil	LPAEHSTSWAENGEVVASDQVDKNLIADLLLLFVILVVVVGGFALLHTPSILLGGGVALVVAVAAEFVWSR*
Ga0134112_103434451	3300017656	Grasslands Soil	EHSTSWAENGEVVASDQVDKNFIADLLVLFVILVVVVGGFALLHTPSILLGGGLALVIAVAAEFAWSR
Ga0066655_100335004	3300018431	Grasslands Soil	MVVLDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR
Ga0066655_104136252	3300018431	Grasslands Soil	VVATDQTDKNFIADLLVLFVILVVVVGGFTILHTPSILLGGGLALVVAVAAEFVWSR
Ga0066655_105638862	3300018431	Grasslands Soil	VVAVDQVDKNFIADLLVLFVILAVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR
Ga0066655_110039632	3300018431	Grasslands Soil	LPAEHSTSWAENGEVVASDQVDKNFIADLLVLFVILVVVVGGFALLHTPSILLGGGLALVIAVAAEFAWSR
Ga0066667_105246671	3300018433	Grasslands Soil	MVAMDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR
Ga0066662_100274154	3300018468	Grasslands Soil	LVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR
Ga0066662_105720491	3300018468	Grasslands Soil	LVVTDQVDKNFIADLLVLLVILMVVVGGFAFLHATAILVGGGLALVV
Ga0215015_103370692	3300021046	Soil	VVVTDQTDKNFIADLLVLLVILIVVVGGFALLHTTAILLGGGLALVVAVAAEFVWSQ
Ga0215015_107411825	3300021046	Soil	MKLRNLEVVVTDQVDKNFIADLLVLLVLLVVVVGGFAVLHSPAILLGGGLALVVAVAAEFAWSR
Ga0210404_100030054	3300021088	Soil	LVVTDQVDKNFIADLLVLLVILVVVVGGFALLHTTAILLGGGLALVVAVAAEFVWSR
Ga0137417_12361042	3300024330	Vadose Zone Soil	MFREMLGNGGVVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTTSILLGGGLALIVAVAAEFVWSR
Ga0207646_100844374	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LIVTDQMDKNFIADLLVLLVILIVVIGSFALLHATAILLGGGLALVVAVAAEFAWSR
Ga0209234_10146345	3300026295	Grasslands Soil	MDQVDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR
Ga0209235_10149931	3300026296	Grasslands Soil	MSLRDGGLLVTDQVDKNFIADLLVLLVILVVVVGGFALLHAPSILLGGGLALVVAVAAEFAWSR
Ga0209235_10308224	3300026296	Grasslands Soil	VVVTDQVDRNFIADLLVLLVILVVVVGGFALLHITAILLGGGLALVVAAAAEFVWSR
Ga0209235_10451051	3300026296	Grasslands Soil	MDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVIAVAAEFVWSR
Ga0209237_10451391	3300026297	Grasslands Soil	LLVTDQVDKNFIADLLVLLVILVVVVGGFALLHAPSILLGGGLALVVAVAAEFAWSR
Ga0209237_10547943	3300026297	Grasslands Soil	MDQVDRNFIADLLVLLVILVVVVGGFALLHTTAILLGGGLALVVAAAAEFVWSR
Ga0209237_12136491	3300026297	Grasslands Soil	MNLENEGLVVTDQVDKNFIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR
Ga0209236_10009911	3300026298	Grasslands Soil	MVATDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR
Ga0209236_10901212	3300026298	Grasslands Soil	MDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR
Ga0209055_10541043	3300026309	Soil	MVAMDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVVAEFVWSR
Ga0209761_10235345	3300026313	Grasslands Soil	VVVTDQVDRNFIADLLVLLVILVVVVGGFALLHTTAILLGGGLALVVAAAAEFVWSR
Ga0209152_100005768	3300026325	Soil	MDQVDKNFIADLLVLFVLLVVVVGGFALLHTPSILLGGGLALVVAVAAEFVWSR
Ga0209801_10125063	3300026326	Soil	LVVTDQVDKNFIADLLVLLVILVVVVGGFAFLHSPSILLGGGLALVVAVAAEFAWSR
Ga0209801_10273901	3300026326	Soil	DAAENGEVVAMDQVDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVVAEFVWSR
Ga0209802_100021214	3300026328	Soil	MSLGDGGLVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVAVAAEFAWSR
Ga0209802_11657722	3300026328	Soil	LVVTDQVDKNFIADLLVLLVILVVVVGGFAFLHTPSILLGGGLALVVAVAAEFAWSR
Ga0209267_10149702	3300026331	Soil	MDQVDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVVAEFVWSR
Ga0257179_10132031	3300026371	Soil	FIADLLVLFVILVVVVGGFILLHTPSILLGGGLALVVAVAAEFVWSR
Ga0209807_13308261	3300026530	Soil	MLSMDQTDKNFIADLLVLFVILVVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR
Ga0209058_12245982	3300026536	Soil	VVATDQTDKNFIADLLVLLVILVVVVGGFTILHTPSILLGGGLALVVAVAAEFVWSR
Ga0209577_100399256	3300026552	Soil	MDQTDKNFIADLLVLFVILVVVVGGFTLLRTPSILLGGGLALVVAVAAEFVWSR
Ga0209588_10453881	3300027671	Vadose Zone Soil	MRLRNGGVDVTDQVDKNFIADLLVLLVILVVVVGGFALLHTSAILLGGGLALVVAVAAEFAWSR
Ga0209588_11678631	3300027671	Vadose Zone Soil	MRLRNGRVVVTDQLDKNFIADLLVLLVILVVVVGGFAFLHTASILLGGGLALVVAVAAEFAWSR
Ga0209689_10557413	3300027748	Soil	MKLRDGGLVVTDQVDKNFIADLLVLLVILVVVVGGFAFLHSPSILLGGGLALVVAVAAEFAWSR
Ga0209689_10963271	3300027748	Soil	MRIRNRGLVVTDQVDKNFIADLLVLLVILMVVVGGFAFLHATAILVGGGLALVVAVAAEFAWSR
Ga0209689_13593911	3300027748	Soil	LVVTDQVDRNFIADLLVLLVILVVVVGGFALLHTPAILLGGGLALVVA
Ga0209689_14377012	3300027748	Soil	LVVTDQVDKNLIADLLVLLVILVVVVGGFALLHTSAILLGGGLALVVAVAAEFAWSR
Ga0209180_100660973	3300027846	Vadose Zone Soil	LDKDFIADLLVLFIILIVVIGGFALLHTPSILLGGGLALVVAVAAEFVWSR
Ga0209701_100575353	3300027862	Vadose Zone Soil	LVVTDQLDKNFIADLLVLLVILVVVVGGFALLHTPSILLGGGLALVVAAAAEFAWSR
Ga0209283_100095184	3300027875	Vadose Zone Soil	MVATDQTDKNFIADLLVLFVILIVVVGGFTLLHTPSILLGGGLALVVAVAAEFVWSR
Ga0209283_101293983	3300027875	Vadose Zone Soil	LVVTDQVDKNFIADLLVLLVILVVVVGGFALLHTPSILLGGGLALVVAVAAEFAWSR
Ga0137415_100116442	3300028536	Vadose Zone Soil	MRLRNGGVVVTDQVDKNFIADLLVLLVILVVVVGGFALLHTSAILLGGGLALVVAVAAEFAWSR
Ga0137415_100275585	3300028536	Vadose Zone Soil	LLVTDQVDKNFIADLLVLLVILVVVVGGFAFLHTPSILLGGGLALVVAVAAEFAWSR
Ga0257175_11263881	3300028673	Soil	MRQRNEGVVVTDQMDKNFIADLLVLLVILVVVIGGFALLHTSAILLGGGLALVVAVAAEFAWSR
Ga0307473_101955822	3300031820	Hardwood Forest Soil	VVATDQVDKNLIADLLVLLVILVVVVGGFALLHTTFILLGGGLALVVAVAAEFVWSR
Ga0307471_1036900311	3300032180	Hardwood Forest Soil	VVVTDQTDKNFIADLLVLFVILIVVVGGFALLHTTAILLGGGLALVVAVAAEFVWSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059802

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences