Metagenome / Metatranscriptome Family F059792

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F059792
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	96 residues
Representative Sequence	MMAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA
Number of Associated Samples	106
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.10 %
% of genes near scaffold ends (potentially truncated)	27.82 %
% of genes from short scaffolds (< 2000 bps)	75.94 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.316 % of family members)
Environment Ontology (ENVO)	Unclassified (36.090 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (36.842 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.44% β-sheet: 0.00% Coil/Unstructured: 56.56%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00873	ACR_tran	31.58
PF01545	Cation_efflux	20.30
PF13545	HTH_Crp_2	3.01
PF16983	MFS_MOT1	3.01
PF01434	Peptidase_M41	1.50
PF16916	ZT_dimer	1.50
PF00916	Sulfate_transp	1.50
PF00702	Hydrolase	1.50
PF13411	MerR_1	0.75
PF13365	Trypsin_2	0.75
PF09948	DUF2182	0.75
PF00376	MerR	0.75
PF07690	MFS_1	0.75
PF12679	ABC2_membrane_2	0.75
PF11799	IMS_C	0.75
PF16576	HlyD_D23	0.75
PF00034	Cytochrom_C	0.75
PF00196	GerE	0.75
PF04392	ABC_sub_bind	0.75
PF00072	Response_reg	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	20.30
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	20.30
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	20.30
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	1.50
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	1.50
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	1.50
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	1.50
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	66.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	66.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	66.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	66.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	66.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101820709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	906	Open in IMG/M
3300002561\|JGI25384J37096_10209236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300002562\|JGI25382J37095_10214934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300002908\|JGI25382J43887_10233192	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	859	Open in IMG/M
3300005174\|Ga0066680_10074431	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300005186\|Ga0066676_10116928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1639	Open in IMG/M
3300005186\|Ga0066676_10720405	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	679	Open in IMG/M
3300005186\|Ga0066676_11001352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300005446\|Ga0066686_10037398	All Organisms → cellular organisms → Bacteria → Proteobacteria	2886	Open in IMG/M
3300005446\|Ga0066686_10983376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300005447\|Ga0066689_10092151	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300005450\|Ga0066682_10205313	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300005552\|Ga0066701_10075920	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300005558\|Ga0066698_10065352	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300005558\|Ga0066698_10638909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	712	Open in IMG/M
3300005558\|Ga0066698_10821331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	600	Open in IMG/M
3300005586\|Ga0066691_10218975	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1113	Open in IMG/M
3300005598\|Ga0066706_10680683	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	817	Open in IMG/M
3300006034\|Ga0066656_10156098	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300006797\|Ga0066659_11033685	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	687	Open in IMG/M
3300006844\|Ga0075428_100007196	All Organisms → cellular organisms → Bacteria	12324	Open in IMG/M
3300006852\|Ga0075433_10971970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	740	Open in IMG/M
3300006871\|Ga0075434_100147855	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300007255\|Ga0099791_10075836	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300007265\|Ga0099794_10006552	All Organisms → cellular organisms → Bacteria	4727	Open in IMG/M
3300009012\|Ga0066710_100371282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2122	Open in IMG/M
3300009012\|Ga0066710_103451879	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300009038\|Ga0099829_10248938	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300009088\|Ga0099830_10057491	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2768	Open in IMG/M
3300009089\|Ga0099828_11175146	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	681	Open in IMG/M
3300009090\|Ga0099827_10073722	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2644	Open in IMG/M
3300009143\|Ga0099792_11068802	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300009147\|Ga0114129_10447416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1695	Open in IMG/M
3300009808\|Ga0105071_1088184	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	550	Open in IMG/M
3300009810\|Ga0105088_1063230	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	641	Open in IMG/M
3300009813\|Ga0105057_1030140	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	830	Open in IMG/M
3300009813\|Ga0105057_1077814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300009815\|Ga0105070_1034069	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	918	Open in IMG/M
3300009817\|Ga0105062_1026561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	997	Open in IMG/M
3300009818\|Ga0105072_1064264	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	709	Open in IMG/M
3300009820\|Ga0105085_1080090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300009821\|Ga0105064_1017203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1317	Open in IMG/M
3300009837\|Ga0105058_1034567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1101	Open in IMG/M
3300009837\|Ga0105058_1131653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	600	Open in IMG/M
3300010304\|Ga0134088_10130233	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300010333\|Ga0134080_10603785	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300010336\|Ga0134071_10111555	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1307	Open in IMG/M
3300011271\|Ga0137393_10986190	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	718	Open in IMG/M
3300012096\|Ga0137389_10139140	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300012202\|Ga0137363_10397106	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300012203\|Ga0137399_10970598	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300012206\|Ga0137380_10377602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1261	Open in IMG/M
3300012206\|Ga0137380_10658851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	911	Open in IMG/M
3300012207\|Ga0137381_11163849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300012362\|Ga0137361_10041003	All Organisms → cellular organisms → Bacteria	3755	Open in IMG/M
3300012362\|Ga0137361_10169122	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1965	Open in IMG/M
3300012363\|Ga0137390_10011133	All Organisms → cellular organisms → Bacteria	7985	Open in IMG/M
3300012685\|Ga0137397_10072539	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300012685\|Ga0137397_10104116	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300012685\|Ga0137397_10182804	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300012685\|Ga0137397_10966860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300012918\|Ga0137396_10432578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	976	Open in IMG/M
3300012918\|Ga0137396_10720779	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	735	Open in IMG/M
3300012922\|Ga0137394_10085733	All Organisms → cellular organisms → Bacteria	2640	Open in IMG/M
3300012922\|Ga0137394_10117800	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300012929\|Ga0137404_11701943	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300012930\|Ga0137407_10199328	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300012930\|Ga0137407_11089815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	757	Open in IMG/M
3300012944\|Ga0137410_10165549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1694	Open in IMG/M
3300012976\|Ga0134076_10029670	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300015245\|Ga0137409_10015030	All Organisms → cellular organisms → Bacteria	7722	Open in IMG/M
3300015245\|Ga0137409_10223783	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300017997\|Ga0184610_1000161	All Organisms → cellular organisms → Bacteria	17245	Open in IMG/M
3300017997\|Ga0184610_1084958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	986	Open in IMG/M
3300018027\|Ga0184605_10073103	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1487	Open in IMG/M
3300018028\|Ga0184608_10091755	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1258	Open in IMG/M
3300018028\|Ga0184608_10267872	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300018031\|Ga0184634_10430438	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300018056\|Ga0184623_10272894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	769	Open in IMG/M
3300018059\|Ga0184615_10190112	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1156	Open in IMG/M
3300018059\|Ga0184615_10245848	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1003	Open in IMG/M
3300018061\|Ga0184619_10222414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	868	Open in IMG/M
3300018063\|Ga0184637_10282624	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1007	Open in IMG/M
3300018074\|Ga0184640_10022900	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300018075\|Ga0184632_10240738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	792	Open in IMG/M
3300018075\|Ga0184632_10342103	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300018076\|Ga0184609_10021925	All Organisms → cellular organisms → Bacteria	2540	Open in IMG/M
3300018077\|Ga0184633_10045771	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300018468\|Ga0066662_10468317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1135	Open in IMG/M
3300019249\|Ga0184648_1338238	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300019259\|Ga0184646_1361764	All Organisms → cellular organisms → Bacteria	2486	Open in IMG/M
3300020068\|Ga0184649_1020757	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300020068\|Ga0184649_1584108	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1138	Open in IMG/M
3300021073\|Ga0210378_10177266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	818	Open in IMG/M
3300021073\|Ga0210378_10252670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	667	Open in IMG/M
3300025325\|Ga0209341_10248504	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1476	Open in IMG/M
3300026285\|Ga0209438_1143408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300026295\|Ga0209234_1083030	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1215	Open in IMG/M
3300026313\|Ga0209761_1029174	All Organisms → cellular organisms → Bacteria → Acidobacteria	3336	Open in IMG/M
3300026324\|Ga0209470_1118284	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300026328\|Ga0209802_1141725	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1028	Open in IMG/M
3300026334\|Ga0209377_1098187	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1219	Open in IMG/M
3300026480\|Ga0257177_1050801	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300026524\|Ga0209690_1076808	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1414	Open in IMG/M
3300026528\|Ga0209378_1012677	All Organisms → cellular organisms → Bacteria → Acidobacteria	4998	Open in IMG/M
3300026536\|Ga0209058_1041479	All Organisms → cellular organisms → Bacteria	2711	Open in IMG/M
3300026537\|Ga0209157_1040653	All Organisms → cellular organisms → Bacteria → Acidobacteria	2570	Open in IMG/M
3300026538\|Ga0209056_10000602	All Organisms → cellular organisms → Bacteria	39578	Open in IMG/M
3300027068\|Ga0209898_1016017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	922	Open in IMG/M
3300027169\|Ga0209897_1004149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1824	Open in IMG/M
3300027169\|Ga0209897_1024602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	850	Open in IMG/M
3300027273\|Ga0209886_1020364	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	990	Open in IMG/M
3300027277\|Ga0209846_1047371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300027384\|Ga0209854_1028002	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	932	Open in IMG/M
3300027490\|Ga0209899_1015437	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1732	Open in IMG/M
3300027561\|Ga0209887_1024063	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300027561\|Ga0209887_1056664	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	835	Open in IMG/M
3300027577\|Ga0209874_1012916	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300027577\|Ga0209874_1046497	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1137	Open in IMG/M
3300027846\|Ga0209180_10059201	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2128	Open in IMG/M
3300027862\|Ga0209701_10004642	All Organisms → cellular organisms → Bacteria	9045	Open in IMG/M
3300027875\|Ga0209283_10174901	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300027882\|Ga0209590_10211756	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1228	Open in IMG/M
3300027952\|Ga0209889_1016304	All Organisms → cellular organisms → Bacteria → Acidobacteria	1735	Open in IMG/M
3300027954\|Ga0209859_1028723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	941	Open in IMG/M
3300027954\|Ga0209859_1079908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300027961\|Ga0209853_1018542	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300028587\|Ga0247828_10036852	All Organisms → cellular organisms → Bacteria	2042	Open in IMG/M
3300028711\|Ga0307293_10224193	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300028878\|Ga0307278_10154192	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1028	Open in IMG/M
3300031949\|Ga0214473_10191596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2369	Open in IMG/M
3300032012\|Ga0310902_10456532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	825	Open in IMG/M
3300032179\|Ga0310889_10620092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.99%
Host-Associated	Host-Associated	3.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.45%
Aquatic	Environmental → Aquatic	16.54%
Plants	Host-Associated → Plants	3.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.45%
Sediment	Environmental → Aquatic → Sediment	12.03%
Freshwater	Environmental → Aquatic → Freshwater	4.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.01%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.15%
Sand	Environmental → Terrestrial → Soil → Sand	19.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.01%
Loam	Environmental → Terrestrial → Soil → Loam	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.56%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	19.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.03%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.01%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.75%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.32%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	19.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	12.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027068	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018207092	3300000364	Soil	MVVVKLGRFQWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSLAPPTSLTIAVVSRSEWFTPVPRSGLEPPPKFVRLSA*
JGI25384J37096_102092361	3300002561	Grasslands Soil	MMAMTLGRFRWLALALLTAWVSLGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGXPMPGTIIVVSRLDQFTPVPRSA
JGI25382J37095_102149341	3300002562	Grasslands Soil	MTAMTLGRFRWLTLALLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTVIVVSWLDQFTPVPRSALEPPPKFGRLSA*
JGI25382J43887_102331922	3300002908	Grasslands Soil	MMAMTLGRFWWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGXPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA*
Ga0066680_100744313	3300005174	Soil	VLFGLTLEVPTAARVTMTAMTLGRFRWLTLALLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTVIVVSWLDQFTPVPRSALEPPPKFGRLSA*
Ga0066676_101169281	3300005186	Soil	MVAVKRGRVQWLTLVLLTAWVIFGPVGMAFDACAAMMALCGDGGPCGAVSAVTDAAPSLAPPTSLTVALVSRSKQFTPVPRSALEPPPKFVRLSP*
Ga0066676_107204052	3300005186	Soil	MTLGRFRWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTGASPSFGPPMPGTVIVVSLLNQFPPVPR
Ga0066676_110013521	3300005186	Soil	RESRSGTWERVILRVSCFTTRSGEELFDCERPPSIRSDVLSGLTPEGPTATRVTMVTVKCGRVQWLTLALLTAWMILGPVGMAFDACAAMMALCDGGPCSVVSAVTDAAPALAPPTSLTVAMASRSEQFTPVPRSALEPPPKFVRLSP*
Ga0066686_100373984	3300005446	Soil	MVSVKSGRFQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPAFGPPMPGTNILVSWLDRFTPVSRSALEPPPKFGRLSA*
Ga0066686_109833761	3300005446	Soil	LTAWVILGPVGVAFDACAAMMALCDGGPCGAVSAVTDAAPSLAPPTSLTVALVSRSKQFTPVPRSALEPPPKFVRLSP*
Ga0066689_100921513	3300005447	Soil	MGGPGSSTGSDVLLGLTPEVPTAARVTMTAMTLGRFRWLTLALLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTVIVVPWLDQFTPVPRSALEPPPKFGRLSA*
Ga0066682_102053131	3300005450	Soil	MVAVKRGRVQWLTLVLLTAWVIFGPVGMAFDACAAMMALCGDGGPCGAVSAVTDAAPSLAPPTSLTVALVSRSKQFTPVP
Ga0066701_100759202	3300005552	Soil	MTAMTLGRFPWLTLALLMAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0066698_100653523	3300005558	Soil	MVAVKRGRVQWLTLVLLTAWVILGPVGMAFDACAAMMALCGDGGPCGAVSAVTDAAPSLAPPTSLTVALVSRSKQFTPVPRSALEPPPKFVRLSP*
Ga0066698_106389091	3300005558	Soil	MMAMTLGRFPWLALALLTAWLILGPVGMAFDSCATMMALCDGGPCGVVSAVTDASPSFGPPMPGTIIVVSRLDQF
Ga0066698_108213312	3300005558	Soil	AWLILGPVGMAFDSCAAMMALCDGGPCGVVSAVTEASPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA*
Ga0066691_102189752	3300005586	Soil	MFGLTPEVPTAARVTMTAMTLGRFRWLTLALLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTVIVVSWLDQFTPVPRSALEPPPKFGRLSA*
Ga0066706_106806832	3300005598	Soil	VLPGLTPEGAAVARVTMVSVKSGRFQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTNILVSWLDQFTPVPRSALEP
Ga0066656_101560982	3300006034	Soil	MSVRRLHGRTCFPGLTPEGPTAARVTMVAVKRRRVQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPAFGPPMPGTNILVSWLDRFTPVSRSALEPPPKFGRLSA
Ga0066659_110336852	3300006797	Soil	MVAVKRGRVQWLTLVLLTVWVILGPVGMAFDACAAMMALCGDGGPCGAVSAVTDAAPSLAPPTSLTVAPVSRSKQFTPVPRSALEPPPKFVRLSP*
Ga0075428_1000071967	3300006844	Populus Rhizosphere	MVLARSRWLILVVLAAWVILGPVGMAFDSCVAIMALCDGGPCGAVSAVTDATPSLAPLALTAAVMSPPNQFTLLPRSTLKPPPKFARLSA*
Ga0075433_109719701	3300006852	Populus Rhizosphere	MAAMSRRPYRWLTLVLLVAWVILGPVGMAFDSCVAVMALCDGGPCGAVSAITDATPTLAPPMLLTLAVVSPPALLTPLAPSALEPPPKSVRLAA*
Ga0075434_1001478553	3300006871	Populus Rhizosphere	MAAMSRRPYRWLTLVLLVAWVILGPVGMAFDSCVAMMALCDGGPCGAVSAITDATPTLAPPMLLTLAVVSPTALLTPLAPSALEPPPKSVRLAA*
Ga0099791_100758363	3300007255	Vadose Zone Soil	MAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGAPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0099794_100065523	3300007265	Vadose Zone Soil	MAMTLGRFRWLALALLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGAPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0066710_1003712823	3300009012	Grasslands Soil	MGGPGSSTGSDVLFGLTPEVPTAARVTMTAMTLGRFRWLTLALLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTVIVVSWLDQFTPVPRSALEPPPKFGRLS
Ga0066710_1034518792	3300009012	Grasslands Soil	VIVKRGRFQWLTLVLLTAWVILGPVGMAFDACAAMMALCGDGGPCGAVSAVTDAAPSLAPPTSLTVALVSRSKQFTPVPRSALEPPPKFVRLSP
Ga0099829_102489383	3300009038	Vadose Zone Soil	MMAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGAPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0099830_100574913	3300009088	Vadose Zone Soil	MMAMTLGRFRWLALAFLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0099828_111751461	3300009089	Vadose Zone Soil	MAMTFGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPK
Ga0099827_100737224	3300009090	Vadose Zone Soil	MMAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA*
Ga0099792_110688021	3300009143	Vadose Zone Soil	MLAMTLGRFRWLALALLTAWVSLGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0114129_104474161	3300009147	Populus Rhizosphere	MVAVKSGRFQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSLAPPTSLPIAVVARSEWFTPVPRSGLEPPPKFVRLSS*
Ga0105071_10881841	3300009808	Groundwater Sand	LILIFLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDTAPSFAPPLSLTIVVVSRLEQFTPISLSTLEPPPKFVRLSA*
Ga0105088_10632301	3300009810	Groundwater Sand	PGRSTGSDVLFGLTLEAPTAARVTMTAMTLGRFRWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDSSPSFGPPMPRTIIVVSRLEQFTPVPRSALEPPPKFGRLSA*
Ga0105057_10301402	3300009813	Groundwater Sand	VARVTMVSVKVGRFQWLAVVLLAAWVILGPVGMAFDSCAAMMALCDGSPCGAVSAVTDASPSLAPPTSLTVAAVSGSEQFTPVPRSALEPPPKFVRLP*
Ga0105057_10778143	3300009813	Groundwater Sand	FLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDTAPSFAPPLSLTIVVVSRLEQFTPISLSTLEPPPKFVRLSA*
Ga0105070_10340692	3300009815	Groundwater Sand	LNEPPAGSRRRDTAPEVPTVARVTMVSVKVGRFQWLAVVLLAAWVILGPVGMAFDSCAAMMALCDGSPCGAVSAVTDASPSLAPPTSLTVAAVSGSEQFTPVPRSALEPPPKFVRLP*
Ga0105062_10265611	3300009817	Groundwater Sand	MLARATIVAVKVGRFQWLILVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSLAPPTSLTVAVVSRSEQFTLVHRSALEPPPKFVRLP*
Ga0105072_10642641	3300009818	Groundwater Sand	MVAVKVGRVQWLTLVLLAAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSLAPPTSLTVAVVSRSEQFTLVHRSALEPPPKFVRLP*
Ga0105085_10800901	3300009820	Groundwater Sand	MVAVKRGRVQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSLTPPTSLTIAVVSRSEWFTPVPRTGLEP
Ga0105064_10172032	3300009821	Groundwater Sand	MTAMTLGRCRWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDSSPAFGPPMPGTIIVVSRLEQFTPVPRSALEPPPKFGRLSA*
Ga0105058_10345671	3300009837	Groundwater Sand	MVAVKVGRVQWLTLVLLAAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSLAPPTSLTVAVVSRSEQFTPVPRSALEPPPKFVRLSS*
Ga0105058_11316531	3300009837	Groundwater Sand	MTLGRFRWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPSFGPPMPATIIVVSRLEQFTPVPRSALEPPPKFGRLSA*
Ga0134088_101302333	3300010304	Grasslands Soil	MIAVKRGRVQWLTLVLLTAWVILGPVGMAFDACAAMMALCGDGGPCGAVSAVTDAAPSLAPPTSLTVALVSRSKQFTPVPRSALEPPPKFVRLSP*
Ga0134080_106037851	3300010333	Grasslands Soil	MVAVKRGRVQWLTLVLLTAWVILGPVGMAFDACAAMMALCDSGPCGAVSAVTDATPALAPPTSLTIAMVSRSEQFTPVPRSALEPPPKFVRLSP*
Ga0134071_101115552	3300010336	Grasslands Soil	MMVMTLGRFRWLTLVLLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTEASPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA*
Ga0137393_109861901	3300011271	Vadose Zone Soil	STRLDVLLRLTPEVPTAARVTMMAMTLGRFRWLALAFLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0137389_101391403	3300012096	Vadose Zone Soil	MAMTFGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGAPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0137363_103971063	3300012202	Vadose Zone Soil	MAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA*
Ga0137399_109705982	3300012203	Vadose Zone Soil	MVSVKSGRFQWLTLVLLTAWVILGPAGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTNILVSWLDQFTPVPRSALEPPPKFGRLSA*
Ga0137380_103776023	3300012206	Vadose Zone Soil	MLHMVGRASRTNAPDAPTVARVTMVAVKRGRVQWLTLVLLTAWVILGPVGMAFDACAAMMALCDGGPCSVVSAVTDAAPALAPPTSLTIAMVSRSEQFTPVPRSALEPPPKFVRLSP*
Ga0137380_106588513	3300012206	Vadose Zone Soil	MVSVKSGRFQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTNILVSWLDQFTPVSRSALEPPPKFGRLSP*
Ga0137381_111638491	3300012207	Vadose Zone Soil	MVAVKRGRVQWLTLVLLTAWVILGPVGMAFDACAAMMALCDGGPCGAVSAVTDATPALAPPTSLTIAMVSRSEQFTPVPRSALEPPPKFVRLSP*
Ga0137361_100410032	3300012362	Vadose Zone Soil	MLAMTLGRFRWLALALLTAWVSLGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGAPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA*
Ga0137361_101691224	3300012362	Vadose Zone Soil	MAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLS
Ga0137390_100111331	3300012363	Vadose Zone Soil	RSDVLLRLTPEVPTAARVTMLAMTLGRFRWLALALLTAWVSLGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0137397_100725392	3300012685	Vadose Zone Soil	MIVMSRGPYRWLTLLLLVAWVILGPAGMAFESCAAMMLLCDGGPCGAVSAVTDATPTLAPPMPLTAAVIMTLVLSTPLAPSSHEPPPKPVRLAA*
Ga0137397_101041163	3300012685	Vadose Zone Soil	LFDCERPPSIRSDVLSGLTPEGPTATRVTMVAVKRGRVQWLTLALLTAWMILGPVGMAFDACAAMMALCDGGPCGVVSAVTDAAPALAPPTSLTVAMVSRSEQFAPVPRSALEPPPKFVRLSP*
Ga0137397_101828042	3300012685	Vadose Zone Soil	MIAMRGSRSRWLILVVLTAWVILGPVGMAFDSCAAMMTLCDGGPCGAVSAVTDSAPSFAPPIALTTALVSPPKQFTPIPRSTLEPPPKFVRLSA*
Ga0137397_109668601	3300012685	Vadose Zone Soil	QWLILVLLTAWVILGPVGMAFDACAAMMALCDGGPCGAVSAVTDAAPALAPPTSLTVALVSRSKQFAPVPRSALEPPPKFVRLSP*
Ga0137396_104325783	3300012918	Vadose Zone Soil	LTSEVPTAARVTMTAMTLGRFRWPTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTNILVSWLDQFTPVPRSALEPPPKFGRLSA*
Ga0137396_107207792	3300012918	Vadose Zone Soil	MVAVKRGRVQWLTLALLTAWMILGPVGMAFDACAAMMVLCDGGPCGAVSAVTDAAPALAPPTSLTVAMVSRSEQFTPVPRSALEPPPKFVRLSP*
Ga0137394_100857332	3300012922	Vadose Zone Soil	MIVMSRGPYRWLTLLLLVAWVILGPVGMAFESCAAMMLLCDGGPCGAVSAVTDATPTLAPPMPLTAAVIMTLVLSTPLAPSSHEPPPKPVRLAA*
Ga0137394_101178003	3300012922	Vadose Zone Soil	MVAVKSRRFQWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVAAVTDAAPSLAPPSSLTIAVVSRSEWFTPVSRSGLEPPPKFVRLSA*
Ga0137404_117019431	3300012929	Vadose Zone Soil	RASCFTTRSGEESFGCERPPSIRSDVLSGLTPDGPTATRVTMVAVKRGRVQWLTLALLTAWMILGPVGMAFDACAAMMALCDGGPCGVVSAVTDAAPALAPPTSLTVAMVSRSEQFAPVPRSALEPPPKFVRLSP*
Ga0137407_101993284	3300012930	Vadose Zone Soil	MMAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA*
Ga0137407_110898151	3300012930	Vadose Zone Soil	LFDCERPPSIRSDVLSGLTPEGPTATRVTMVTVKCGRVQWLTLALLTAWMILGPVGMAFDACAAMMALCDGGPCSMVSAVTDAAPALAPPTSLTVAMASRSEQFTPVPRSALEPPPKFVRLSP*
Ga0137410_101655491	3300012944	Vadose Zone Soil	MTAMSRRPYRWLTFLVLVAWVILGPVGMAFESCAAMMLLCDGGPCGAVSAVTDATPTLAPPMPLTAAVIMTLVLSTPLAPSSHEPPPKPVRLAA*
Ga0134076_100296701	3300012976	Grasslands Soil	MTAMTLGRFRWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPSFGPPMPGTIIVVSRLDQFTPVPRSAL
Ga0137409_100150303	3300015245	Vadose Zone Soil	MVAVKRGRFQWLTLVLLTAWVILGPVGMAFDACAAMMALCDGGPCGAVSAVTDAAPSLAPPTPLTVAVVSGSEQFTPVPRSALEPPPKFVRLSA*
Ga0137409_102237832	3300015245	Vadose Zone Soil	MVAVKSRRFQWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPALAPPTSLTVAMVSRSEQFAPVPRSALEPPPKFVRLSP*
Ga0184610_10001612	3300017997	Groundwater Sediment	MMAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPVPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA
Ga0184610_10849582	3300017997	Groundwater Sediment	MITMIIGRSRWLILAVLTAWVVLGPIGMAFDSCAAMMALCDGSPCGAVSAVTDSAPSFAPPIALTVAVMSLPMQFTPIPRSTIEPPPKSVRLSD
Ga0184605_100731033	3300018027	Groundwater Sediment	MLAMTVGRSRWLVLVVLTAWVILGPIGMAFDSCAAMMTLCDGGPCGAVSAVTDAAPSFAPPAAVTVTVMSPPKQFTPIPGSTLEPPPKFVRLS
Ga0184608_100917552	3300018028	Groundwater Sediment	MLGRSRWLILVVLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSFAPPTALTAAVMSPPKQFTPIPRSALEPPPKSVRLSV
Ga0184608_102678722	3300018028	Groundwater Sediment	MVSRSRWLILAVLMAWVILGPVGMAFDSCAAMMTLCDGGPCGAVSAVTDAAPSFAPPAALTIAVIAAPKQFTPIPRSTLEPPPKFVRLSA
Ga0184634_104304381	3300018031	Groundwater Sediment	MVGRSRWLVLAVLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSFAPPMALTIAVISAPKQFTLLPRSALEPPPKFVRLSA
Ga0184623_102728942	3300018056	Groundwater Sediment	MMLGRSRWLILAVLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAMPSFAPPVALTMAVMSPPKQFTPIPRSALEPPPKSVRLSA
Ga0184615_101901122	3300018059	Groundwater Sediment	MTLGRSRWLMLAVLTAWVILGPIGMAFDSCAAMMALCDGGPCGAVSAVTDVAPSFAPPVALTMAVMSPLKPFTPISLSALEPPPKFVRLSA
Ga0184615_102458481	3300018059	Groundwater Sediment	MTLGRSRRLILIVLAAWVILGPVGMAFDTCAAMMTLCDGGPCGAVSAVTDAAPSFAPPVALTMAVMSPPKPFTPISRSALEPPPKFVRLSA
Ga0184619_102224141	3300018061	Groundwater Sediment	MIAMTPGRPRWLILAVLTAWVILGPIGMAFDSCAAMMTLCDGGPCGAVSAVTDAAPSFAPPAALTVAVIAAPKPFTPIPRSTLDPPPKFVRLSA
Ga0184637_102826241	3300018063	Groundwater Sediment	MTLGRSRWLMLAVLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAMPSFAPPVALTMAVMSPPKQFT
Ga0184640_100229004	3300018074	Groundwater Sediment	MMVGRSRWLVLAVLTAWVILGPVGMAFDSCAAMMALCDGAPCGAVSAVTDAAPSFAPPMALTIAVISAPKQFTLLPRSALEPPPKSVRLSA
Ga0184632_102407382	3300018075	Groundwater Sediment	LGWMATLENGLARLLTPVSPTARRVTMTDMELRRSRWLMLAVLTAWVILGPVGMAFDSCAAMMTLCDGGPCGAVSAVTDAAPSFAPPIAVMIAEISPPREFTPVPRSTLEPPPKFVRLSP
Ga0184632_103421032	3300018075	Groundwater Sediment	MMLGRSRWLILVVLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSFAPPTALTAAVMSPPKQFTPIPRSALEPPPKFVRLSA
Ga0184609_100219252	3300018076	Groundwater Sediment	MVLGCSRWLILVVLTAWVILGPVGMAFDSCTAMMMLCDGGPCGAVSAVTNTAPSFAPPVALTIAVVSPPKQFTPIPRSALEPPPKSVRFSA
Ga0184633_100457714	3300018077	Groundwater Sediment	MNTMMVGRSRWLMLTVLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSFAPPVALTIAVVSPPKQFTPIPRSALEPPPKSVRLSA
Ga0066662_104683172	3300018468	Grasslands Soil	VLLGLTPEVPTAARVTMTAMTLGRFRWLTLALLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTVIVVSWLDQFTPVPRSALEPPPKFGRLSA
Ga0184648_13382381	3300019249	Groundwater Sediment	AAWVILGPVGMAFDSCAAMMTLCDGGPCGAVSAVTDAAPSFAPPVALTIAVLSPPKQFTPVPRSTLEPPPKSVRLSA
Ga0184646_13617644	3300019259	Groundwater Sediment	MMAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSVVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA
Ga0184649_10207572	3300020068	Groundwater Sediment	GRSRRLILIVLAAWVILGPVGMAFDTCAAMMTLCDGGPCGAVSAVTDAAPSFAPPVALTMAVMSPPKPFTPISRSALEPPPKFVRLSA
Ga0184649_15841081	3300020068	Groundwater Sediment	MTLGRPRWLMLAVLTAWVILGPIGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSFAPPIAVMIAEISPPKEFTPVPRSTLEPPPKSVRLSA
Ga0210378_101772661	3300021073	Groundwater Sediment	MVLGCSRWLILVVLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSFAPPTALTAAVMSPPKQFTPIPRSALE
Ga0210378_102526701	3300021073	Groundwater Sediment	MTFGRSRWLIWVVLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSFAPPIAVMIAEISPPREFTPVPRSTLEPPPKFVRLSP
Ga0209341_102485042	3300025325	Soil	MWVGDKPHANMAAMAFRCSPWLTLAVLAAWLILGPVGVAFDSCAAMMTLCDGGPCGVVSAVTDAALAFAPPTALAIAVTSPPKEFAPVPRSTIEPPPKFVRLSA
Ga0209438_11434081	3300026285	Grasslands Soil	MAAMSRPSYRWLTLVVLVAWVILGPVGMAFESCAAMMLLCDGGPCGAVSAVTDATPTLAPPMALTAAVIPTLTPFTPVAPSSLEPPPKSVRLSA
Ga0209234_10830303	3300026295	Grasslands Soil	MLRGRHRWLTLVLLAAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVVDAVPTFAPPTLLPVALVSAPQPFTPVAPAALEPPPKFVRLSS
Ga0209761_10291745	3300026313	Grasslands Soil	MLMTLGRFRWLTLVLLTAWMILGPVGMAFDSCATMMALCDGGPCGVVSAVTDASPSFGPPMPGTIIVVSRLDQFILVPRSALEPPPKSGRLSA
Ga0209470_11182842	3300026324	Soil	MVAVKRGRVQWLTLVLLTAWVIFGPVGMAFDACAAMMALCGDGGPCGAVSAVTDAAPSLAPPTSLTVALVSRSKQFTPVPRSALEPPPKFVRLSP
Ga0209802_11417251	3300026328	Soil	VLFGLTLEVPTAARVTMTAMTLGRFRWLTLALLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTVIVVSWLDQFTPVPRSALEPPPKFG
Ga0209377_10981871	3300026334	Soil	VLFGLTPKVPTAARVTMTAMTLGRFRWLTLALLTAWMILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPTFGPPMPGTVIVVSWLDQFTPVPRSALEPPPKFGRLSA
Ga0257177_10508012	3300026480	Soil	MMAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSVVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSG
Ga0209690_10768081	3300026524	Soil	MTAMTLGRFPWLTLALLMAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA
Ga0209378_10126773	3300026528	Soil	MVSVKSGRFQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPAFGPPMPGTNILVSWLDRFTPVSRSALEPPPKFGRLSA
Ga0209058_10414792	3300026536	Soil	MMAMTLGRFPWLALALLTAWLILGPVGMAFDSCATMMALCDGGPCGVVSAVTDASPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA
Ga0209157_10406532	3300026537	Soil	MTLGRFRWLTLALLTAWLILGPVGMAFDSCAAMMALCDGGPCGVVSAVTEASPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA
Ga0209056_1000060241	3300026538	Soil	MVSVKSGRFQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPAFGPPMPGTNIVVSWLDRFTPVSRSALEPPPKFGRLSA
Ga0209898_10160173	3300027068	Groundwater Sand	PAGSRRRDTAPEVPTVARVTMVSVKVGRFQWLAVVLLAAWVILGPVGMAFDSCAAMMALCDGSPCGAVSAVTDASPSLAPPTSLTVAAVSGSEQFTPVPRSALEPPPKFVRLP
Ga0209897_10041493	3300027169	Groundwater Sand	MVSVKVGRFQWLAVVLLAAWVILGPVGMAFDSCAAMMALCDGSPCGAVSAVTDASPSLAPPTSLTVAAVSGSEQFTPVPRSALEPPPKFVRLP
Ga0209897_10246022	3300027169	Groundwater Sand	LILIFLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDTAPSFAPPLSLTIVVVSRLEQFTPISLSTLEPPPKFVRLSA
Ga0209886_10203643	3300027273	Groundwater Sand	MVAVKSGRFQWLILVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDATPSLAPPTSLTVAAVSPSEQFTPVPRSALEPPPKFVRLP
Ga0209846_10473711	3300027277	Groundwater Sand	EVPTVAHVTMVAVKVGRVQWLTLVLLAAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDSSPSFGPPMPRTIIVVSRLEQFTPVPRSALEPPPKFGRLSA
Ga0209854_10280023	3300027384	Groundwater Sand	MAVTRVRIFGVKLRRFQWLTLVLLAAWVILGPVGMAFDSCAAMMALCDGSPCGAVSAVTDASPSLAPPTSLTVAAVSGSEQFTPVPRSALEPPPKFVRLP
Ga0209899_10154373	3300027490	Groundwater Sand	MGGPGRSTGSDVLFGLTLEAPTAARVTMTAMTLGRFRWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDSSPSFGPPMPRTIIVVSRLEQFTPVPRSALEPPPKFGRLS
Ga0209887_10240633	3300027561	Groundwater Sand	MVAVKVGRFQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGTVSAVTDAAPSLAAPTPLTVAVVSRSVQFTPVPRSALEPPP
Ga0209887_10566641	3300027561	Groundwater Sand	LTLALLMAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDSSPAFGPPMPGTIIVVSRLEQFTPVPRSALEPPPKFGRLSA
Ga0209874_10129161	3300027577	Groundwater Sand	MVAVKVGRFQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGTVSAVTDAAPSLAAPTPLTVAVVSRSVQFTP
Ga0209874_10464971	3300027577	Groundwater Sand	MTLGRFRWLTLALLMAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDASPSFGPPMPATIIVVSRLEQFTPVPRSALEPPPKFGRLSA
Ga0209180_100592013	3300027846	Vadose Zone Soil	MMAMTLGRFRWLALAFLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGAPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA
Ga0209701_100046429	3300027862	Vadose Zone Soil	VLLRLAPEVLTAARVTMMAMTLGRFRWLALAFLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA
Ga0209283_101749013	3300027875	Vadose Zone Soil	MMAMTFGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGAPMPGTIIVVSRLDQFTPVPRSALEPPPKFGRLSA
Ga0209590_102117562	3300027882	Vadose Zone Soil	MMAMTLGRFRWLALALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDAAPSFGPPMPGTIIVVSRLDQFTPVPRSALEPPPKSGRLSA
Ga0209889_10163042	3300027952	Groundwater Sand	MGGPGRSTGSDVLFGLTLEAPTAARVTMTAMTLGRFRWLTLALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDSSPAFGPPMPGTIIVVSRLEQFTPVPRSALEPPPKFGRLS
Ga0209859_10287233	3300027954	Groundwater Sand	SGPTPEGPTVVRVTMVAVKRGRVQWLTLVLLTAWVILGPVGMAFDSCAAMMALCDGGPCGAVSAVTDAAPSLAPPTSLTVAVVSHSKQFTPVPRSALEPPPKFVRLSP
Ga0209859_10799081	3300027954	Groundwater Sand	MVAVTLERSRWLILILLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTAAASSFAPPMPLTIAVVSWSEQFTPVPRST
Ga0209853_10185423	3300027961	Groundwater Sand	LALLTAWVILGPVGMAFDSCAAMMALCDGGPCGVVSAVTDSSPAFGPPMPGTIIVVSRLEQFTPVPRSALEPPPKFGRLSA
Ga0247828_100368522	3300028587	Soil	MVLARSRWLILVVLAAWVILGPVGMAFDSCVAITALCDGGPCGAVSAVTDATPSLAPLALTAAVMSPPNQFTLLPRSTLKPPPKFARLSA
Ga0307293_102241931	3300028711	Soil	MIAMTPGRPRWLILAVLTAWVILGPIGMAFDSCAAMMTLCDGGPCGAVSAVTDAAPSFAPPAALTIAVIAPPKQFTPVPRSTLEPPPKFVRLSA
Ga0307278_101541921	3300028878	Soil	MIAMTRGRSRWLILAVLTAWVILGPIGMAFDSCAAMMTLCDGGPCGAVSAVTDAAPSFAPPVALTAAVIASPKQFAPIPRPTLEPPPKFVRLSA
Ga0214473_101915962	3300031949	Soil	MTLGRSRRLILIVLAAWVILGPVGMAFDTCAAMMTLCDGGPCGAVSAVTDAAPSFAPPVALTMAAMSPPKPFTPISRSALEPPPKFVRLSA
Ga0310902_104565322	3300032012	Soil	MVLARSRWLILVVLAAWVILGPVGMAFDSCVAIMALCDGGPCGAVSAVTDATPSLAPLALTAAVMSPPNQFTLLPRSTLKPPPKFARLSA
Ga0310889_106200921	3300032179	Soil	MVLARSRWLILVVLAAWVILGPVGMAFDSCVAIMALCDGGPCGAVSAVTDATPSLAPLALTAAVMSPPNQFTLLPRSTLKPPPKFAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059792

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences