NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F059786

Metagenome / Metatranscriptome Family F059786

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059786
Family Type Metagenome / Metatranscriptome
Number of Sequences 133
Average Sequence Length 59 residues
Representative Sequence MKSILWAVCLLVLVRPATDLGAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFVRLAE
Number of Associated Samples 110
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 97.37 %
% of genes near scaffold ends (potentially truncated) 82.71 %
% of genes from short scaffolds (< 2000 bps) 78.20 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (75.188 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(18.045 % of family members)
Environment Ontology (ENVO) Unclassified
(20.301 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.105 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 48.24%    β-sheet: 0.00%    Coil/Unstructured: 51.76%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF00230MIP 9.77
PF06800Sugar_transport 8.27
PF01850PIN 6.02
PF01425Amidase 6.02
PF12867DinB_2 3.01
PF07857TMEM144 2.26
PF00120Gln-synt_C 1.50
PF05119Terminase_4 1.50
PF04945YHS 1.50
PF09994DUF2235 1.50
PF01380SIS 0.75
PF00216Bac_DNA_binding 0.75
PF01865PhoU_div 0.75
PF01875Memo 0.75
PF00857Isochorismatase 0.75
PF10137TIR-like 0.75
PF12728HTH_17 0.75
PF01842ACT 0.75
PF02163Peptidase_M50 0.75
PF00892EamA 0.75
PF05977MFS_3 0.75
PF01475FUR 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 9.77
COG4975Glucose uptake protein GlcUCarbohydrate transport and metabolism [G] 8.27
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 6.02
COG3747Phage terminase, small subunitMobilome: prophages, transposons [X] 1.50
COG0735Fe2+ or Zn2+ uptake regulation protein Fur/ZurInorganic ion transport and metabolism [P] 0.75
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 0.75
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 0.75
COG1355Predicted class III extradiol dioxygenase, MEMO1 familyGeneral function prediction only [R] 0.75
COG1392Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 familyInorganic ion transport and metabolism [P] 0.75
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.75
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.75

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.19 %
UnclassifiedrootN/A24.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_121590578All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300001593|JGI12635J15846_10640976All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300001593|JGI12635J15846_10815636All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300002914|JGI25617J43924_10242737All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300004152|Ga0062386_101316865All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300005434|Ga0070709_10179924Not Available1484Open in IMG/M
3300005439|Ga0070711_100207443All Organisms → cellular organisms → Bacteria1516Open in IMG/M
3300005542|Ga0070732_10552198All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300005555|Ga0066692_10169363All Organisms → cellular organisms → Bacteria1352Open in IMG/M
3300005587|Ga0066654_10062578Not Available1686Open in IMG/M
3300006052|Ga0075029_100245408All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1129Open in IMG/M
3300006059|Ga0075017_100216654All Organisms → cellular organisms → Bacteria1390Open in IMG/M
3300006086|Ga0075019_10198370Not Available1187Open in IMG/M
3300006086|Ga0075019_10465897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium780Open in IMG/M
3300006086|Ga0075019_10598596All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium691Open in IMG/M
3300006102|Ga0075015_100390703All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300006800|Ga0066660_10337694All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300006893|Ga0073928_10011319All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium10420Open in IMG/M
3300006893|Ga0073928_10110934All Organisms → cellular organisms → Bacteria2280Open in IMG/M
3300006893|Ga0073928_10217643All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300006893|Ga0073928_10860563All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300007265|Ga0099794_10332975All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300009038|Ga0099829_10049511All Organisms → cellular organisms → Bacteria3106Open in IMG/M
3300009038|Ga0099829_10285815All Organisms → cellular organisms → Bacteria1350Open in IMG/M
3300009088|Ga0099830_11359319All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300009088|Ga0099830_11451653All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300009089|Ga0099828_11655593All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300009137|Ga0066709_102686269All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300009143|Ga0099792_10150015All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1283Open in IMG/M
3300009524|Ga0116225_1122158All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1198Open in IMG/M
3300009698|Ga0116216_10608685All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300009824|Ga0116219_10329758All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300010341|Ga0074045_10912611Not Available554Open in IMG/M
3300010366|Ga0126379_13307114All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300010379|Ga0136449_103026198All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300011064|Ga0138525_1138041All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium977Open in IMG/M
3300011270|Ga0137391_10690326Not Available849Open in IMG/M
3300011271|Ga0137393_10364242All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300012189|Ga0137388_10624535All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300012202|Ga0137363_11348958All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300012206|Ga0137380_10320655Not Available1386Open in IMG/M
3300012349|Ga0137387_11321386All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300012362|Ga0137361_10499677All Organisms → cellular organisms → Bacteria → Acidobacteria1117Open in IMG/M
3300012683|Ga0137398_10035497All Organisms → cellular organisms → Bacteria2863Open in IMG/M
3300012685|Ga0137397_10506165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium899Open in IMG/M
3300012917|Ga0137395_11230178All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300012923|Ga0137359_10377362All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300012923|Ga0137359_11582115All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300012972|Ga0134077_10539958All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300012984|Ga0164309_10456593All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300017822|Ga0187802_10042194Not Available1653Open in IMG/M
3300017823|Ga0187818_10020776All Organisms → cellular organisms → Bacteria2810Open in IMG/M
3300017934|Ga0187803_10365809Not Available581Open in IMG/M
3300017936|Ga0187821_10333803All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300017942|Ga0187808_10070737All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae1496Open in IMG/M
3300017943|Ga0187819_10873319All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300017995|Ga0187816_10015018All Organisms → cellular organisms → Bacteria2950Open in IMG/M
3300017995|Ga0187816_10062260Not Available1572Open in IMG/M
3300017995|Ga0187816_10412368All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300017999|Ga0187767_10293274All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300018007|Ga0187805_10450788All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium600Open in IMG/M
3300018012|Ga0187810_10350806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300018034|Ga0187863_10006502All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7990Open in IMG/M
3300018085|Ga0187772_10238298Not Available1232Open in IMG/M
3300018468|Ga0066662_12912452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300019888|Ga0193751_1217159All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium624Open in IMG/M
3300020199|Ga0179592_10082594Not Available1474Open in IMG/M
3300020579|Ga0210407_10396716All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300020580|Ga0210403_10424116All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1085Open in IMG/M
3300020580|Ga0210403_10509226All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium977Open in IMG/M
3300021168|Ga0210406_10227328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1539Open in IMG/M
3300021171|Ga0210405_10652367All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium816Open in IMG/M
3300021403|Ga0210397_10286896All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300021403|Ga0210397_10613115Not Available832Open in IMG/M
3300021432|Ga0210384_11207142All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium661Open in IMG/M
3300021476|Ga0187846_10213634All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300021559|Ga0210409_10720758All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium869Open in IMG/M
3300022557|Ga0212123_10134963All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1933Open in IMG/M
3300025320|Ga0209171_10009589All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium9228Open in IMG/M
3300025320|Ga0209171_10090289All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1899Open in IMG/M
3300025905|Ga0207685_10808084All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300025916|Ga0207663_11011039All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300025922|Ga0207646_10284928All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1493Open in IMG/M
3300025922|Ga0207646_10733653All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium882Open in IMG/M
3300025939|Ga0207665_11515184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300025988|Ga0208141_1017024All Organisms → cellular organisms → Bacteria → Acidobacteria662Open in IMG/M
3300026334|Ga0209377_1074021All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1459Open in IMG/M
3300026551|Ga0209648_10503328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium701Open in IMG/M
3300027381|Ga0208983_1045940All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium848Open in IMG/M
3300027575|Ga0209525_1067236All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium864Open in IMG/M
3300027591|Ga0209733_1020682Not Available1775Open in IMG/M
3300027591|Ga0209733_1138016All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300027605|Ga0209329_1145355All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300027625|Ga0208044_1153929All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium636Open in IMG/M
3300027635|Ga0209625_1027323All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1268Open in IMG/M
3300027667|Ga0209009_1107972All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium706Open in IMG/M
3300027684|Ga0209626_1172061All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300027898|Ga0209067_10551976All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300027908|Ga0209006_10336747All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300028906|Ga0308309_10494648Not Available1057Open in IMG/M
3300030646|Ga0302316_10173175All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium892Open in IMG/M
3300030862|Ga0265753_1024364All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium932Open in IMG/M
3300030991|Ga0073994_12383794All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300031231|Ga0170824_108504437All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1236Open in IMG/M
3300031720|Ga0307469_10728974All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300031753|Ga0307477_10213367All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300031753|Ga0307477_10313941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1081Open in IMG/M
3300031754|Ga0307475_11021475All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium649Open in IMG/M
3300031823|Ga0307478_11822158All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300031890|Ga0306925_10615729All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300031962|Ga0307479_10001986All Organisms → cellular organisms → Bacteria → Acidobacteria18690Open in IMG/M
3300032160|Ga0311301_11974890All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300032205|Ga0307472_100693735All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium914Open in IMG/M
3300032954|Ga0335083_10142638All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2276Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.77%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil9.77%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment8.27%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds8.27%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.27%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring5.26%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.01%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.01%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.50%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.50%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.75%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.75%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.75%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.75%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.75%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.75%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004603Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011064Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025320Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025988Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030646Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_12159057823300000956SoilMKFICPVLCAVAFAAIALPTSAQVNPYKDGTPGITGYRSEVLSEVIVQESKFIRLAEAIPAEKYSW
JGI12635J15846_1064097613300001593Forest SoilMKSILWAVFLLALVRPGIDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKF
JGI12635J15846_1081563613300001593Forest SoilMKRIVSALCLFVLAIGALRLTAQVNPYKEGTPGVAGYRSEVLAEVMIQEDKFTRLAEAIPADK
JGI12053J15887_1019489633300001661Forest SoilMKSILWAVCVLALVLPAIDLSAQVNPYKDGTPGVSGYRSEVLAEVM
JGI25617J43924_1024273713300002914Grasslands SoilMKSILWAVCLLALVRPGTDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFVRLAEAVPADKYSWRPAP
Ga0062386_10131686523300004152Bog Forest SoilMKSILWAACLLALLRPATDVSAQVNPYKDGTLGVSGYRSEALAEVMIQEDK
Ga0068918_128820613300004603Peatlands SoilMKGILWVLCLLALVLPVSDLNAQVNPYKDGTPGVSGYRSEVLA
Ga0070709_1017992413300005434Corn, Switchgrass And Miscanthus RhizosphereMKRTLMAFCLLLTASAMQLAAQGVNPYKDGTPGVTGYRSEVLAEVMIQEDKFTRLAEAVPADKYRW
Ga0070711_10020744333300005439Corn, Switchgrass And Miscanthus RhizosphereMKLILSILCLLPLAVAAVPAAAQVNPYKDGTPGVTGYRSEVLAEVMVQEDKFARLAA
Ga0070732_1055219823300005542Surface SoilMNRFFAAVCLLVLASSAVRVQAQINPYKEGTPGVTGYRSEVLSEVIVQGDKFTRLAEAI
Ga0066692_1016936323300005555SoilMSRIRWSLCAVALAAAIVPAAAQVNPYKDGTPGVTGYRSEVLAEVIVQESKFTRLAE
Ga0066654_1006257813300005587SoilMKFSVSVLCWFVLTAGAVQLVAQGVNPYKDGTPGVTGYRSEVLAEVMVQEDKFTRLAEAIPADKYTW
Ga0075029_10024540843300006052WatershedsMKNILWFLCLLALVGAAVNLNAQVNPYKDGTPGVSGYRSEVLAEVM
Ga0075017_10003583413300006059WatershedsMKSILWSMCLLALVGAAVNLNAQVNPYKDGTPGVSGYRSEVLAEVMIQED
Ga0075017_10021665443300006059WatershedsMKSILWAVCLLALVPATDLNAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAIPADKYT
Ga0075017_10104947623300006059WatershedsMKNILWFLCLVALVGAAVNLNAQVNPYKDGTPGVSGYRSEVLAEVMIQED
Ga0075019_1019837013300006086WatershedsMKQLLCAACLLVLGAVAVRAQVNPYKEGTPGLTGYRSEVMAEVMIQEDKFTRLAE
Ga0075019_1046589713300006086WatershedsMKRIFSAFCLLVFAVGAFRVAAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFMRLAEAIPAEKY
Ga0075019_1059859623300006086WatershedsVRFVITTVCLLALAAGGVGAAAQVNPYKDGTPGITGYRSEVMAEVMVQEDKFTRLA
Ga0075015_10039070323300006102WatershedsMRNTVLVFSLFAVCAGTLQVAAQVNPYKEGTPGVTGYRSEVMAEVMVQEDKLIRLAEAIPAEK
Ga0066660_1033769413300006800SoilMRAILPAVCLFVLAVTGLRASAQVNPYKEGTPGVTGYRSEVMAEVMVQEEKFTRLAEAIPAEKYT
Ga0073928_1001131913300006893Iron-Sulfur Acid SpringMKSILWAKSILWAVCLLALVRPAIDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEA
Ga0073928_1011093433300006893Iron-Sulfur Acid SpringMRRISTVLFLFVLTVSAVHTTAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFTRLAEAIPAE
Ga0073928_1021764313300006893Iron-Sulfur Acid SpringMKGILWAVCLLALFRPGTDLTARVNPYKDGTPGVSGYRSEVLAEVMIHEDKFLRLAEAVPAEIHLASGT*
Ga0073928_1086056313300006893Iron-Sulfur Acid SpringMKRIFPAICWLLVAAAAVPVSAQVNPYKDGTPGVTGYRSEVLAEAMIQEDKFNRLAEAIPAGKFSWRPSP
Ga0099794_1033297513300007265Vadose Zone SoilMKGILWAVCLMALVLPATDLRAQVNPYKDKDGTPGVSGYRSEVLAEVMIQEDKFVRLAEAVTRG*
Ga0099829_1004951153300009038Vadose Zone SoilVKTILWVVCLLALVRPGTELSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVP
Ga0099829_1028581513300009038Vadose Zone SoilMTRIVSTFGLFVLTFAAVQVTAQVNPYKDGTPGVTGYRSEVLSEVIRQENKFTRLAEAIPAEKYSWRP
Ga0099830_1135931923300009088Vadose Zone SoilLVCLLATTATALSVKAQVNPYKDGTPGLNGYRSEIMAEVMIQEDKFTRLAEA
Ga0099830_1145165323300009088Vadose Zone SoilMKRAFSTLLLCLLSIAAARVSAQVNPYKEGTPGVTGYRSEVLSEVIVQEDKFSRLAEA
Ga0099828_1165559323300009089Vadose Zone SoilMKSILWAFCLLAMVRPATELSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFVRLAEAVPADKYSW
Ga0066709_10268626913300009137Grasslands SoilMRLIRWSLCAVVLAAAIVPATAQVNPYKDGTPGVTGYRSEVLAEVIVQENKFTRLAEAIPAEKY
Ga0099792_1015001533300009143Vadose Zone SoilMKSILWALCLLALVRPGTDLSAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFLRLA
Ga0116225_112215813300009524Peatlands SoilMKNIFWAVCLLAMFRPVTDLNAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFARLAEAVPADKYTW
Ga0116216_1060868523300009698Peatlands SoilMKRAFSAFFLFVAAIAAVRVAAQVNPYKDGTPGITGYRSEVLAEVMIQEDKF
Ga0116219_1032975813300009824Peatlands SoilMKRMLSAFCLFVLTAGALRAAAQINPYKDGTPGVTGYRSEVLAEIMIQEDKFTRLAE
Ga0116223_1028685333300009839Peatlands SoilMKSILWAACLLALLRPATDVSAQVNPYKDGTPGVSGYRSEV
Ga0074045_1091261113300010341Bog Forest SoilVKSSLLAGCLLALVGAATAIHAQVNSYKDGTPRVSGYRSEVLAEVMIQ
Ga0126379_1330711423300010366Tropical Forest SoilMHRILAALCLVLPALCAITVEAQVNPYKEGTPGVSGYRSEILAEVMVQEDKLGRLAE
Ga0136449_10302619823300010379Peatlands SoilMKRAFSTLLLFVTTVAAVRVTAQMNPYKDGTPGVTGYRSEVLAEVMIQEDKF
Ga0138525_113804113300011064Peatlands SoilMKGILWVLCLLALVLPVSDLNAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFARLAEAVPADKYTW
Ga0137391_1069032623300011270Vadose Zone SoilMKRVLPALFLLGVTAVAVRVTAQVNPYKDGTPGVTGYRSEVLSEVIVQQDRLTRLAEAIPAEKY
Ga0137393_1036424223300011271Vadose Zone SoilMKRAFSTLLLCLLSIAAARASAQVNPYKEGTPGVTGYRSEVLSEVIVQEDKFARLAEAIP
Ga0137389_1117407813300012096Vadose Zone SoilMKSILLTACLLALVCSATHLISAQVNPYKDGTPGVS
Ga0137388_1062453513300012189Vadose Zone SoilVPQILFKEISMKRSLALLCVMAALLALPLGAQVNPYKDGTPGVTGFRSEVLAEVMIQEDKFVRLAGAI
Ga0137363_1134895813300012202Vadose Zone SoilMKRILCAVCLVVLVRPAADLRAQVNPYKEGTPGVSGYRSEVLAEVMIQEDKFLRLAE
Ga0137380_1032065523300012206Vadose Zone SoilMKRLFSAFCLFVCTAGAVRVAAQVNPYKDGTPGVTGYRSEILAEVMIQEDKFTRLAEAIPVDKY
Ga0137387_1132138613300012349Vadose Zone SoilMKRLFSAFCLFVCTAGAVRVAAQVNPYKDGTPGVTGYRSEILAEVMIQEDKFTRLAEAIPVD
Ga0137361_1049967723300012362Vadose Zone SoilMKRISSAICLFLLSASVLRVAAQANPYKDGTPGVTGYRSEVMAEVMVQEDKFTRLAEAIP
Ga0137361_1151454033300012362Vadose Zone SoilMKRILCAVCLVVLVRPAADLRAQVNPYKDGTPGVSGYRSEVLAEVMIQE
Ga0137398_1003549743300012683Vadose Zone SoilVCLLATTATALSVKAQVNPYKDGTPGLSGYRSEIMAEVMIQEDKFTRLAEAIPAEKYTWR
Ga0137397_1050616523300012685Vadose Zone SoilMKRILWALSLLALVLPGIDLNAQINPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVRADKYTLASGTRCAFLR*
Ga0137395_1123017813300012917Vadose Zone SoilMKSILWAVCLMALVLPATDLRAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFVRLAEA
Ga0137359_1037736243300012923Vadose Zone SoilMKSILWAVCLMALVLPATDLRAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFVRLAEAVPADKYTW
Ga0137359_1158211523300012923Vadose Zone SoilMKRIFWALSLVTLAVAAIPAAAQVNPYKDGTPGVTGYRSEVMAEVTVQEDKFLRLAESIPAEKYS
Ga0134077_1053995823300012972Grasslands SoilMSRIRWSLCAVALAVAIEPAAGQINPYKDGTPGVTGYRSEVLAEVIVQENKFTRLAEAIPAEKYS
Ga0164309_1045659313300012984SoilMKFLLAILCTAVFVAPAVLTNAQVNPYKDGTPGVTGYRSEVLAEVLVQEDKFVRLAEAIPADKYSWR
Ga0187802_1004219413300017822Freshwater SedimentVKFIPSVLCLLVLAASALRTAAQINPYKDGTPGVTGYRSEVLSEVIIQGDKFTRLAEAIPAETY
Ga0187818_1002077643300017823Freshwater SedimentMKGVVWAVCVLTLLCCTSTLKGQVNPYKEGTPGVSGYRSEVLAEVMIQEDKFLRLAEAIPADKYTW
Ga0187803_1036580913300017934Freshwater SedimentMKRIFWTACLLAVALPLVTAAQVNPYKNPTPGVSGYRGEVSAEVTIQEDKFL
Ga0187821_1033380323300017936Freshwater SedimentVKLIFSVACFLMFVAGAIPAYTQVNPYKDGTPGVTGYRSEVMAEVMVQEDKFTR
Ga0187808_1007073733300017942Freshwater SedimentMPRILSAICLLALASAATDVAAQVNPYKEGTPGVTGYRSEVMAEVMIQEDKFT
Ga0187819_1087331913300017943Freshwater SedimentMKSILWAVCLLVLVRPATDLGAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFVRLAE
Ga0187816_1001501853300017995Freshwater SedimentMKRILSALFLFILAAAAIRLSAQVNPYKEGTPGVTGYRSEVMAEVIVQEDKFTRL
Ga0187816_1006226013300017995Freshwater SedimentVKFIPSVLCLLVLAASALRTAAQINPYKDGTPGVTGYRSEVLSEVIIQGDKFTRLAEAIPAEKY
Ga0187816_1041236813300017995Freshwater SedimentVKSIFSALCLLLLTATAVQAAAQVNPYKDGTPGVTGYRSEVLSEVIIQGDKFTRLAEAIPAEKY
Ga0187767_1029327413300017999Tropical PeatlandMKYVLCAWFLLGMFVSTASLRAQVNPYKEGTPGVTGYRSEVLAEVMIQEDKFQRLAEAIPADKYA
Ga0187805_1045078823300018007Freshwater SedimentVKFIPSVLCLLVLAASALRTAAQINPYKDGAPGVTGYRSEVLSEVIIQGDKF
Ga0187810_1035080613300018012Freshwater SedimentVKSIFSALCLLLLTATAVQAAAQVNPYKDGTPGVTGYRSEVLSEVIIQGDKFTRLAEAIPAEKYSWR
Ga0187863_1000650283300018034PeatlandMKLTFVAPCLVLAMAATIPLVSQVNPDKDGTPGVTGYRSEVLAEVIVQEDKFLRLAEAIP
Ga0187772_1023829813300018085Tropical PeatlandMKSILAFLGLLTLTTGAIPSSAQVNPYKEGTPGVTGYRSEVLAEVMIQEDK
Ga0066662_1291245213300018468Grasslands SoilMKSRLMQCRLVLFSVILTPILLAAPAVPPAAQVNLYQAGTPGVTGYRSEVLASVMSQAAKFTRLAEA
Ga0193751_112628913300019888SoilMKSILWATCLLALVRPAIDLSAQVNPYKDGTPGVS
Ga0193751_121715923300019888SoilMKSILWALCLLALVRLGTDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFVRLA
Ga0179592_1008259413300020199Vadose Zone SoilMKSILWALCLLALVRLGTELSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAIPADK
Ga0210407_1039671613300020579SoilLKSIVWAVCLLALVRSATDVRAQVNPYKVGTPGVSGYRSEVLAEVMIQEDKFLRLAEAV
Ga0210403_1042411613300020580SoilMKRAFSTLFLCLLSIAAVDVSAQVNPYKDGTPGVTGYRSEVLAEVIVQEDKFGRL
Ga0210403_1050922613300020580SoilMKSVLWALCLLVLVRPATDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLA
Ga0210406_1022732813300021168SoilMKSILWAVFLLALVRLGTDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVPADKY
Ga0210405_1065236713300021171SoilMKSILRAVCLLALVRPAIDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVPADKYIWRPAPDVRSFAEVF
Ga0210396_1104233333300021180SoilMKSILSAVCLLLALVRPAIDLNAQVNPYRDGTPGVSGYRSEVLA
Ga0210393_1048168833300021401SoilMKSIWLGLCALSILAPAIVVTAQVNPYKDGTPGVSGYRSEVLAEVM
Ga0210397_1028689613300021403SoilMKRLLPASCLFALVVATVHVIAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFTRLAEAIP
Ga0210397_1061311513300021403SoilMKRIVLALFVFVPMFVTLHLVAQVNPYKEGTPGVSGYRSEVLSEVIVQEDKFTRL
Ga0210384_1120714213300021432SoilMKIPVKHIVEALCLIAITGPATHLTAQVNPYKDGTPGLTGYRSEVLAEVMIQEDKFVRLAEAIPAEKYSWRP
Ga0187846_1021363413300021476BiofilmMQRIVSTFCLLLITAGAVRVAAQVNPYKEGTPGVTGYRSEVMAEVMVQEDKFTRLAEAIPADKYS
Ga0210409_1072075813300021559SoilMKSILWAVCLLALVRPAIDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVPADKYIWRPAPDVRS
Ga0242663_110484023300022523SoilMKSILSAVCLLLALVRPAIDLNAQVNPYRDGTPGVSGYRSEVLAEV
Ga0212123_1013496313300022557Iron-Sulfur Acid SpringMKGILWAVCLLALFRPGTDLSAQVNPYKDGTPGVSGYRSEVLAEVMIHEDKFLRLAEAVPADKYT
Ga0209171_1000958913300025320Iron-Sulfur Acid SpringMKSILWAKSILWAVCLLALVRPAIDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVPADKYIWRPAPDVRSF
Ga0209171_1009028953300025320Iron-Sulfur Acid SpringMKGILWAVCLLALFRPGTDLTARVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLR
Ga0207685_1080808423300025905Corn, Switchgrass And Miscanthus RhizosphereMRRIRWSLCAVVLAAAIVPATGQVNPYKDGTPGVTGYRSEVLAEVVVQESKFTRLAEAIPAEK
Ga0207663_1101103923300025916Corn, Switchgrass And Miscanthus RhizosphereMKLILSILCLLPLAVAAVPAAAQVNPYKDGTPGVTGYRSEVLAEVMVQEDKFARLAAAI
Ga0207646_1028492823300025922Corn, Switchgrass And Miscanthus RhizosphereMKIPAKVIVAGLCVLAIAAHAARLTAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFMRL
Ga0207646_1073365313300025922Corn, Switchgrass And Miscanthus RhizosphereVKTILWVVCLLALVRPGTELSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEA
Ga0207665_1151518423300025939Corn, Switchgrass And Miscanthus RhizosphereMKIPIVAALCLIAITAPATHLTAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFLRLAEVIPAEKYTSRPAPDVRS
Ga0208141_101702423300025988Rice Paddy SoilMKRVIWALVLLIVALPGIGLFGQANPYKDGTPGVTGYRSEILAEAMIQQDKFVRLAEAIPADKY
Ga0209377_107402143300026334SoilMKGILWAVCLMALVLPATDLRAQVNPYKDGTPGVSGYRSEVLAEMMIQEDKFLRLAEAVPADK
Ga0209648_1050332833300026551Grasslands SoilMKSILWAVCLLALVRPGTDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFVRLAEAVPADKYSWRPAPNVL
Ga0179587_1103340713300026557Vadose Zone SoilMQASCRPLARWFVCLLAASATALSVKAQVNPYKDGTPGLSGYRSESMAEVMIQEDKFTRLAE
Ga0208983_104594033300027381Forest SoilMKSIFWAMCLLALVRPGTDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAV
Ga0209525_106723613300027575Forest SoilMKQILSAFCLFFLTAGAVQVAAQANPYKDGTPGVTGYRSEVLAEVTIQEDKFTRL
Ga0209527_107342713300027583Forest SoilMKRILWTLCLLALVRSATDLAAQLNPYKEGTPGVSGYRSEVLA
Ga0209733_102068213300027591Forest SoilMKHILSALCLFVLAIGTLRVTAQVNPYKEGTPGITGYRSEVLAEVMIQEDKFTR
Ga0209733_113801623300027591Forest SoilMKRILSALCWFVLTTGALHVAAQVNPYKEGTPGVTGYRSEVLAEVMIQEDKFTRLAEAIPADKY
Ga0209329_114535523300027605Forest SoilMEIPVKLIVAALCLIAITAPATHLTAQVNPYKDGTPGVTGYRSEVLAEVLIQEDKFLRLAEAIPA
Ga0208044_115392913300027625Peatlands SoilMKNIFWAVCLLAMFRPVTDLNAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFARLAEAVPAD
Ga0209625_102732333300027635Forest SoilMKSILWAVCLLALVRPAIDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVPADKYLW
Ga0209009_110797213300027667Forest SoilMKRALSIFFLFVATITAVRGSAQVNPYKEGTPGVTGYRSEVLAEVMIQEDKFTRLAE
Ga0209626_117206133300027684Forest SoilMKSILWAVCLLALVRPAIDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVPADKYIWRPAPDV
Ga0209579_1079519123300027869Surface SoilMKRATAVLWLLVISAAAVPMCAQVNPYKDGTPGVTGYRSEVMAE
Ga0209283_1088461223300027875Vadose Zone SoilMKSILWAVCLLALVRPGTDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQE
Ga0209067_1055197613300027898WatershedsMKQLLCAACLLVLGAVAVRAQVNPYKEGTPGLTGYRSEVMAEVMIQEDKFTRLAEAVP
Ga0209006_1033674713300027908Forest SoilVKRRFPALSLFVLAVAVLHTEAQVNPYKDGTPGVTGYRSEVLSEVIGQENKFTRLAE
Ga0209698_1006114863300027911WatershedsMKSILWSMCLLALVGAAVNLNAQVNPYKDGTPGVSGYRSE
Ga0209698_1115822023300027911WatershedsMKNILWFLCLLALVGAAVNLNAQVNPYKDGTPGVSGYRSE
Ga0308309_1049464823300028906SoilMKRILSALCFFMLTVGALRVAAQAVNPYKDGTPGVTGYRSEVMAEVMVQEDKFTRL
Ga0310037_1023494533300030494Peatlands SoilMKNIFWAVCLLALFRPATDLNAQVNPYKDGTPGVTGY
Ga0302316_1017317513300030646PalsaMKQIFSTFCWLAVTLAAVRVTAQVHPYRDGTPGVTGYRSEVLAIVMIQGDEFTRLAEAI
Ga0265753_102436423300030862SoilMKQILSAFCLFFLTAGAVQVAAQANPYKDGTPGVTGYRSEVLAEVTIQEDKFTRLAEAIP
Ga0073994_1238379423300030991SoilMTSILWAVCLLALVRPAIDLSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVPADKY
Ga0170824_10850443713300031231Forest SoilMKPILSALCLFVLVAGTVQLVAQGVNPYKDGTPGVAGYRSEVLAEVMIQEDKFSRLAEAIPADKYT
Ga0307469_1072897423300031720Hardwood Forest SoilMKLILSILCLLLLAVAAVPATAQVNPYKDGTPGVTGYRSEVLAEVMVQEDKFARLAA
Ga0307477_1021336713300031753Hardwood Forest SoilMNRIFAALCLLVFAVPPVQISAQVNPYKEGTPGVTGYRSEVLAEVMIQEDKFTRLAE
Ga0307477_1031394123300031753Hardwood Forest SoilMKRIVSALCLFGLAIVAIRVSAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFARLAEAIPAE
Ga0307475_1102147513300031754Hardwood Forest SoilMKHTCSTLVLFVLTLAAVRVPAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFTRLAEAIPAEKFSW
Ga0307478_1182215823300031823Hardwood Forest SoilMKRISTTVCLFVLAVAAVHVSAQVNPYKDGTPGVTGYRSEVLSEVIVQEDKFVRLAEA
Ga0306925_1061572933300031890SoilMKCGFAALCLFTVALGSVRVAAQVNPYKEGTPGVTGYRAEVMAEVMVQEDKLTRLAEAIP
Ga0307479_10001986263300031962Hardwood Forest SoilMKSIFWAVCLLALVRPAIDLNAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLA
Ga0311301_1147800013300032160Peatlands SoilVKPILWTLCLLSLALPRLAAAQVNPYKNPIPGVSGYRSEV
Ga0311301_1197489023300032160Peatlands SoilMKRIFPAICLLLVAATPFRCAAQVNPYKDGTPGVTGYRSEVLAEVMIQEDKFTRLAEAIPAEK
Ga0307472_10069373533300032205Hardwood Forest SoilVKTILWVVCLLALVRPGTELSAQVNPYKDGTPGVSGYRSEVLAEVMIQEDKFLRLAEAVPADKYIWRPAPD
Ga0335083_1014263833300032954SoilMKHMFPALFLLTLMAGAVRTAAQVNPYKDGTPGVTGVRSEVLAMVMIQENEFERLAEAMP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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