Metagenome Family F059727

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059727
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	89 residues
Representative Sequence	MNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Number of Associated Samples	117
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.18 %
% of genes near scaffold ends (potentially truncated)	45.86 %
% of genes from short scaffolds (< 2000 bps)	78.20 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.474 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.023 % of family members)
Environment Ontology (ENVO)	Unclassified (37.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.609 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.86% β-sheet: 3.41% Coil/Unstructured: 47.73%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF11937	DUF3455	44.36
PF07298	NnrU	18.80
PF00486	Trans_reg_C	3.76
PF01565	FAD_binding_4	3.01
PF02913	FAD-oxidase_C	2.26
PF05170	AsmA	1.50
PF04191	PEMT	1.50
PF00072	Response_reg	0.75
PF13502	AsmA_2	0.75
PF09084	NMT1	0.75
PF13561	adh_short_C2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG4094	Uncharacterized membrane protein	Function unknown [S]	18.80
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.26
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	1.50
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.75
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.47 %
Unclassified	root	N/A	10.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.47 %
Unclassified	root	N/A	10.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.47 %
Unclassified	root	N/A	10.53 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.62 %
Unclassified	root	N/A	10.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.35 %
Unclassified	root	N/A	10.53 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39.85 %
Unclassified	root	N/A	10.53 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	15.04 %
Unclassified	root	N/A	10.53 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.26 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.75 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.78 %
Unclassified	root	N/A	10.53 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.26 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.53 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.26 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.50 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.75 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.53 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.50 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.50 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.75 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.75 %
Mycobacterium pseudokansasii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium pseudokansasii	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_6836387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	827	Open in IMG/M
2170459021\|G14TP7Y02G4Z7Q	Not Available	645	Open in IMG/M
2199352025\|deepsgr_contig01459.993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1610	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c019684	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300000156\|NODE_c0723976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6421	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101475440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1334	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1011337	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1022106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1006	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10169547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	520	Open in IMG/M
3300000789\|JGI1027J11758_12193609	Not Available	561	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1069846	Not Available	553	Open in IMG/M
3300004267\|Ga0066396_10044001	Not Available	696	Open in IMG/M
3300004479\|Ga0062595_100772403	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300004633\|Ga0066395_10158931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1152	Open in IMG/M
3300005164\|Ga0066815_10081943	Not Available	582	Open in IMG/M
3300005165\|Ga0066869_10049537	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005165\|Ga0066869_10098587	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005168\|Ga0066809_10216333	Not Available	523	Open in IMG/M
3300005173\|Ga0066822_1016761	Not Available	527	Open in IMG/M
3300005276\|Ga0065717_1005601	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005289\|Ga0065704_10510177	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005328\|Ga0070676_10412599	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300005328\|Ga0070676_11376781	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005329\|Ga0070683_100054816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3697	Open in IMG/M
3300005330\|Ga0070690_100151873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1581	Open in IMG/M
3300005332\|Ga0066388_100342219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2142	Open in IMG/M
3300005332\|Ga0066388_100532038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1807	Open in IMG/M
3300005332\|Ga0066388_100633672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1686	Open in IMG/M
3300005332\|Ga0066388_102388258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	959	Open in IMG/M
3300005347\|Ga0070668_100970511	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005354\|Ga0070675_100981854	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005356\|Ga0070674_100129186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1881	Open in IMG/M
3300005367\|Ga0070667_100453777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1172	Open in IMG/M
3300005367\|Ga0070667_100661752	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005439\|Ga0070711_100031459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3523	Open in IMG/M
3300005455\|Ga0070663_100914694	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005457\|Ga0070662_101105566	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005539\|Ga0068853_101126852	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005543\|Ga0070672_100021286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4743	Open in IMG/M
3300005617\|Ga0068859_100030826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5382	Open in IMG/M
3300005713\|Ga0066905_100904262	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005764\|Ga0066903_100731452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1752	Open in IMG/M
3300005764\|Ga0066903_101348078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1336	Open in IMG/M
3300005764\|Ga0066903_103534268	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005764\|Ga0066903_105999629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	636	Open in IMG/M
3300005842\|Ga0068858_100776143	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300006854\|Ga0075425_100122033	All Organisms → cellular organisms → Bacteria → Proteobacteria	2974	Open in IMG/M
3300006854\|Ga0075425_102632003	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300006871\|Ga0075434_102358400	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300006914\|Ga0075436_100511532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	879	Open in IMG/M
3300009011\|Ga0105251_10163586	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300009092\|Ga0105250_10100347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1181	Open in IMG/M
3300009553\|Ga0105249_10140298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2317	Open in IMG/M
3300010043\|Ga0126380_10391766	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300010047\|Ga0126382_12008469	Not Available	550	Open in IMG/M
3300010360\|Ga0126372_10000343	All Organisms → cellular organisms → Bacteria → Proteobacteria	15793	Open in IMG/M
3300010360\|Ga0126372_10153989	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300010360\|Ga0126372_10370876	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300010360\|Ga0126372_10509450	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300010397\|Ga0134124_11294402	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300012473\|Ga0157340_1005535	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300012476\|Ga0157344_1020161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium pseudokansasii	568	Open in IMG/M
3300012481\|Ga0157320_1008722	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300012485\|Ga0157325_1004583	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012488\|Ga0157343_1038081	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012519\|Ga0157352_1002773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	1453	Open in IMG/M
3300012955\|Ga0164298_11014763	Not Available	614	Open in IMG/M
3300012958\|Ga0164299_10891218	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300012961\|Ga0164302_10287126	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300012971\|Ga0126369_10753208	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300012984\|Ga0164309_10932817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	710	Open in IMG/M
3300012986\|Ga0164304_11543318	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300012987\|Ga0164307_10373652	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300013296\|Ga0157374_10187305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2023	Open in IMG/M
3300013306\|Ga0163162_10447848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1423	Open in IMG/M
3300014326\|Ga0157380_10440543	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300014968\|Ga0157379_11760490	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300015372\|Ga0132256_100424319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1434	Open in IMG/M
3300015374\|Ga0132255_101001279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1253	Open in IMG/M
3300017792\|Ga0163161_10730904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	826	Open in IMG/M
3300017944\|Ga0187786_10098213	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300017947\|Ga0187785_10012039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2958	Open in IMG/M
3300017947\|Ga0187785_10031503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1923	Open in IMG/M
3300017974\|Ga0187777_10197861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1354	Open in IMG/M
3300018000\|Ga0184604_10304910	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300018060\|Ga0187765_10014954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3587	Open in IMG/M
3300018067\|Ga0184611_1089687	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300018072\|Ga0184635_10108650	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300020018\|Ga0193721_1173641	Not Available	504	Open in IMG/M
3300021560\|Ga0126371_11004614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	976	Open in IMG/M
3300021560\|Ga0126371_12325945	Not Available	648	Open in IMG/M
3300025900\|Ga0207710_10387511	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300025901\|Ga0207688_10051853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2298	Open in IMG/M
3300025903\|Ga0207680_10002036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	9466	Open in IMG/M
3300025904\|Ga0207647_10441985	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300025911\|Ga0207654_10033211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2859	Open in IMG/M
3300025919\|Ga0207657_10053571	All Organisms → cellular organisms → Bacteria → Proteobacteria	3494	Open in IMG/M
3300025920\|Ga0207649_10117866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1785	Open in IMG/M
3300025924\|Ga0207694_10354419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1215	Open in IMG/M
3300025925\|Ga0207650_10053527	All Organisms → cellular organisms → Bacteria	2992	Open in IMG/M
3300025927\|Ga0207687_10064800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2593	Open in IMG/M
3300025931\|Ga0207644_10815949	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300025932\|Ga0207690_11662976	Not Available	533	Open in IMG/M
3300025933\|Ga0207706_11222777	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300025935\|Ga0207709_10588995	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300025940\|Ga0207691_10055814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3599	Open in IMG/M
3300025944\|Ga0207661_10529339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1078	Open in IMG/M
3300026041\|Ga0207639_10204085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1697	Open in IMG/M
3300026121\|Ga0207683_10000908	All Organisms → cellular organisms → Bacteria → Proteobacteria	27236	Open in IMG/M
3300027288\|Ga0208525_1005343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1340	Open in IMG/M
3300028711\|Ga0307293_10273482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300028793\|Ga0307299_10195347	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300028809\|Ga0247824_11017661	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031170\|Ga0307498_10103142	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300031184\|Ga0307499_10157849	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031231\|Ga0170824_112199598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8039	Open in IMG/M
3300031446\|Ga0170820_14694343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4663	Open in IMG/M
3300031546\|Ga0318538_10005448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4846	Open in IMG/M
3300031573\|Ga0310915_10000917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14776	Open in IMG/M
3300031682\|Ga0318560_10212672	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300031748\|Ga0318492_10479450	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031768\|Ga0318509_10576474	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031771\|Ga0318546_10048669	All Organisms → cellular organisms → Bacteria → Proteobacteria	2628	Open in IMG/M
3300031858\|Ga0310892_10200018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1201	Open in IMG/M
3300031913\|Ga0310891_10003971	All Organisms → cellular organisms → Bacteria → Proteobacteria	3105	Open in IMG/M
3300031945\|Ga0310913_10025056	All Organisms → cellular organisms → Bacteria → Proteobacteria	3751	Open in IMG/M
3300032091\|Ga0318577_10034264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2212	Open in IMG/M
3300032179\|Ga0310889_10078665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1358	Open in IMG/M
3300032180\|Ga0307471_100735597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1152	Open in IMG/M
3300032205\|Ga0307472_100630851	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300034818\|Ga0373950_0035484	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300034820\|Ga0373959_0215606	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.89%
Host-Associated	Host-Associated	40.60%
Engineered	Engineered	1.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.64%
Plants	Host-Associated → Plants	40.60%
Aquatic	Environmental → Aquatic	2.26%
Solid Waste	Engineered → Solid Waste	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.78%
Sediment	Environmental → Aquatic → Sediment	2.26%
Grass	Engineered → Solid Waste → Grass	1.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.54%
Loam	Environmental → Terrestrial → Soil → Loam	11.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.26%
Composting	Engineered → Solid Waste → Grass → Composting	1.50%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.75%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.51%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.01%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.50%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.75%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012481	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610	Host-Associated	Open in IMG/M
3300012485	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610	Host-Associated	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0607.00005670	2162886013	Switchgrass Rhizosphere	MNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK
4NP_02515400	2170459021	Switchgrass, Maize And Mischanthus Litter	MDTKNQTPYHGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
deepsgr_01529850	2199352025	Soil	MHTGKINRRSNGTIDIDFYRQEAFLLRRQATNKFFRRLGRAGRPLIGVATIIANYALLTPRDPLPPSTNSIFVSANVPLLPTESXXXS
ARSoilOldRDRAFT_0196842	3300000044	Arabidopsis Rhizosphere	MNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVP
NODE_07239765	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MNTEKTKRLSNGTIDVDFYRQEAFLLRREATNKLFRRIRRGSRPLIGVVTIIANYTLLTPREPSPPSINSIFVSAEVPLVPTEPKK*
INPhiseqgaiiFebDRAFT_1014754402	3300000364	Soil	MNIEKIKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKKIIG*
AF_2010_repII_A01DRAFT_10113373	3300000580	Forest Soil	MNSEKIKRRSNGTIDVDFYRQEAFLFRREATNKLFRRIRRASRPLIGTVTIIANYGLLTPREPSPPNANSIFVSAEIPLMPTEPKK*
AF_2010_repII_A01DRAFT_10221062	3300000580	Forest Soil	MNIEKIKRLSNGTIDVDFYRQETFCLRREATNKLFRRIRLASRPLIGAVTIIANYALLTPREPSPPSTNSIFVSAEVPLAPTEPKK*
AF_2010_repII_A1DRAFT_101695472	3300000597	Forest Soil	MNIEKIKRLSNGTIDVDFYRQETFRLRREATNKLFRRIGRASRPLIGAVTIIANYALLTPREPSPPSTYSIFVSAEVPLAPTEPKK*
JGI1027J11758_121936091	3300000789	Soil	LTPPTTFSTEKHPTNRIESVTGEHAMNIEKIKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKKIIG*
AP72_2010_repI_A001DRAFT_10698462	3300000893	Forest Soil	MNTEKTKRLSNGTIDVDFYRQEAFLLRREATNKLFRRIRRGSRPLIGVVTIIANYTLLTPREPSPPSINSIFVSAEVPLVPTEPK
Ga0066396_100440012	3300004267	Tropical Forest Soil	MNIEKIKRRSNGTIDVDFYRQEAFLFRREATNKLFRRIRRASRPLIGTVTIIANYGLLTPREPSPPSANSIFVSAEIPLMPTEPKK*
Ga0062595_1007724031	3300004479	Soil	MNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK*
Ga0066395_101589312	3300004633	Tropical Forest Soil	MNIEKIKRRSNGTIDVDFYRQEAFLFRREATNKLFRRIRRASRPLIGTVTIIANYGLLTPREPSPPNANSIFVSAEIPLMPTEPKK*
Ga0066815_100819432	3300005164	Soil	MNIETIKHRCNGTVDIDFYRQEAFLLRREATNKFFRRIRRASRPLIGVATIIANYALLTPREPSPPSTNSIFVSAEVPLVPTEPKK*
Ga0066869_100495372	3300005165	Soil	LQKNIRSIGTELENRGVMDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0066869_100985872	3300005165	Soil	MMNIETIKHRCNGTVDIDFYRQEAFLLRREATNKFFRRIRRASRPLIGVATIIANYAFLTPREPSPPSTNSIFMSAEVPLVPTEPKK*
Ga0066809_102163332	3300005168	Soil	MNIETIKHRCNGTVDIDFYRQEAFLLRREATNKFFRRIRRASRPFIGVATIIANYALLTPREPSPPSTNSIFVSAEVPLVPTEPKK*
Ga0066822_10167611	3300005173	Soil	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0065717_10056011	3300005276	Arabidopsis Rhizosphere	MNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0065704_105101772	3300005289	Switchgrass Rhizosphere	MNTEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMT
Ga0070676_104125991	3300005328	Miscanthus Rhizosphere	NTEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK*
Ga0070676_113767811	3300005328	Miscanthus Rhizosphere	IRSIGTELENRGVMDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0070683_1000548164	3300005329	Corn Rhizosphere	MDIEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0070690_1001518731	3300005330	Switchgrass Rhizosphere	NRGVMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0066388_1003422193	3300005332	Tropical Forest Soil	MSIEKIKRRSNGTVDVDFYRQEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSTNSIFVSAEVPLVPTQPKIFE*
Ga0066388_1005320381	3300005332	Tropical Forest Soil	KRRTNGTVDVDFYRQEAFFLRREATNKFFRRIRRATRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIE*
Ga0066388_1006336722	3300005332	Tropical Forest Soil	MNIEKIKRLSNGTIYVDFYRQETFCLRREATNKLFRRIRLASRPLIGAVTIIANYALLTPRGPSPPSTNSIFVSAEVPLAPTEPKK*
Ga0066388_1023882582	3300005332	Tropical Forest Soil	MNIEKIKRRCNGTIDVDFYRQEAFFLRREATNKLFRRIKHAGRPLIGVITIIANYALLTPREPSPPSSNSIFVSAEVPLVPTEPRK*
Ga0070668_1009705111	3300005347	Switchgrass Rhizosphere	VMDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIF
Ga0070675_1009818541	3300005354	Miscanthus Rhizosphere	PTNRIESVTGEHAMNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK*
Ga0070674_1001291862	3300005356	Miscanthus Rhizosphere	VMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0070667_1004537771	3300005367	Switchgrass Rhizosphere	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVP
Ga0070667_1006617522	3300005367	Switchgrass Rhizosphere	SKRSIGIELENRGVMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0070711_1000314594	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTNIEKIKRRTNGTVDVDFYRQEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0070663_1009146942	3300005455	Corn Rhizosphere	MNIEKIKRRTNGTVDVDFYREEAFLLRRDATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0070662_1011055662	3300005457	Corn Rhizosphere	ACLTPPTTFSTEKHPTNRIESVTGEHAMNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK*
Ga0068853_1011268521	3300005539	Corn Rhizosphere	EKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0070672_1000212862	3300005543	Miscanthus Rhizosphere	MDIEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKNNQVRA*
Ga0068859_1000308264	3300005617	Switchgrass Rhizosphere	VMDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0066905_1009042621	3300005713	Tropical Forest Soil	GALLSVPYTADYVFYEKHPTNRIESVTGGYAMNMEKIKRRSNGSVDADFYRQEAFPLRREATNKLFRRIRRASRPLIGTVTIVANNALLTPRESSPPSANSIFVSAEVPLMPTKPKK*
Ga0066903_1007314521	3300005764	Tropical Forest Soil	PTTFSTEKHPTNRIESVTGENAMSIEKIKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRACRPLIGTVTIVANYALLTPRESSPPNANSIFVSAEVPLMPTESKK*
Ga0066903_1013480782	3300005764	Tropical Forest Soil	MSIEKIKRLSNGTIDVDFYRQEAFLLRREATNKLFRRIRRASRPLIGVVTIIANYALLTPREPSPPSTNSIFVSAEVPLVPTEPKK*
Ga0066903_1035342681	3300005764	Tropical Forest Soil	DPVRVEDVMNIEKIKRRTNGTVDVDFYRQEAFFLRREATNKFFRRIRRATRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIE*
Ga0066903_1059996292	3300005764	Tropical Forest Soil	MNIEKIKRLSNGTIDVDFYRQETFRLRREATNKLFRRIRRASRPLIGAVTIIANYALLTPREPSTPSTNSIFVSAEIPLAPTEPKK*
Ga0068858_1007761432	3300005842	Switchgrass Rhizosphere	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPK
Ga0075425_1001220334	3300006854	Populus Rhizosphere	MNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIF
Ga0075425_1026320031	3300006854	Populus Rhizosphere	MDIEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSI
Ga0075434_1023584002	3300006871	Populus Rhizosphere	VMDIEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIF
Ga0075436_1005115322	3300006914	Populus Rhizosphere	MNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPCANSIFVSAEVQLMTTEPKK*
Ga0105251_101635862	3300009011	Switchgrass Rhizosphere	LRFLQKNIRSIGTELENRGVMDNEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0105250_101003472	3300009092	Switchgrass Rhizosphere	MDIEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0105249_101402983	3300009553	Switchgrass Rhizosphere	MNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKNNQVRA*
Ga0126380_103917662	3300010043	Tropical Forest Soil	VEDVMNIEKIKRRTNGTIDVDFYRQEAFVLRRDATNKLFRRLRRAGRPLIGVVTIIANYALLTPREPSPPSSNSIFVSAEVPLVPTEPRK*
Ga0126382_120084692	3300010047	Tropical Forest Soil	VEDVMNIEKIKRRTNGTVDVDFYRQEAFFLRREATNKFFRRIRRATRPFIGTVTLIANYALLTPREPSPPGNNSIFVSAEVPLVPKDRKLSSKSIKEKFHGKSYC
Ga0126372_100003434	3300010360	Tropical Forest Soil	MNIEKIKRRSNGTIDVDFYRQEAFLFRREATNKLFRRIRRASRPLIGTVTIIANYGLLTPREPSPPSANSIFVSAEIPLMPTEPKNNWMR*
Ga0126372_101539893	3300010360	Tropical Forest Soil	DVDFYRREAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSTNSIFVSAEVPLVPTQPKIFE*
Ga0126372_103708762	3300010360	Tropical Forest Soil	MNIEKIKRRCTGTIDVDFYRQEAFFLRREATNKLFRRIKHAGRPLIGVITIIANYALLAPREPSPPSSNSIFVSAEVPLVPTEPRK*
Ga0126372_105094502	3300010360	Tropical Forest Soil	MNTEKTKRLSNGTIDVDFYRQEAFLLRREATNKLFRRIRRGSRPLIGVVTIIANYTLLTPREPSPPSINSIFVSAEVPLVPTEPKE*
Ga0134124_112944022	3300010397	Terrestrial Soil	MNIEKIKRRTNGTVDVDFYREEAFLLRRDATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIF
Ga0157340_10055351	3300012473	Arabidopsis Rhizosphere	MDIEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0157344_10201611	3300012476	Arabidopsis Rhizosphere	ELENRGVMDIEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0157320_10087222	3300012481	Arabidopsis Rhizosphere	EKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0157325_10045831	3300012485	Arabidopsis Rhizosphere	KRSIGIELENRGVMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRDSRPFIGTVTLIANYALLTPREPSPPSNNSISVSAEVPLVPTEPKIIK*
Ga0157343_10380811	3300012488	Arabidopsis Rhizosphere	IEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0157352_10027732	3300012519	Unplanted Soil	MDIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0164298_110147632	3300012955	Soil	MNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPRAHSICVSAEVP*
Ga0164299_108912181	3300012958	Soil	EKHPTNRIESVTGEHAMNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK*
Ga0164302_102871262	3300012961	Soil	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVTTEPKIIK*
Ga0126369_107532081	3300012971	Tropical Forest Soil	MNIEKIKRLSNGTIDVDFYRQETFRLRREATNKLFRRIRRASRPLIGAVTIIANYALLTPREPSTPSTNSIFVSAEVPLVPTEPKK*
Ga0164309_109328172	3300012984	Soil	MNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKKIIG*
Ga0164304_115433181	3300012986	Soil	IELENRGVMNIEKIKRRTNGTVDVDFYREEAFLLRRDATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0164307_103736522	3300012987	Soil	HAMNIEKIKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK*
Ga0157374_101873053	3300013296	Miscanthus Rhizosphere	MNIEKVKRRSNGTVDVDFYRQEACRLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK*
Ga0163162_104478481	3300013306	Switchgrass Rhizosphere	TFSTEKHPTNRIESVTGEHAMNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK*
Ga0157380_104405431	3300014326	Switchgrass Rhizosphere	RLRFLQKSKRSIGIELENRGVMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0157379_117604901	3300014968	Switchgrass Rhizosphere	MNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPL
Ga0132256_1004243193	3300015372	Arabidopsis Rhizosphere	MDIEKIKRRTNVTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK*
Ga0132255_1010012791	3300015374	Arabidopsis Rhizosphere	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKI
Ga0163161_107309042	3300017792	Switchgrass Rhizosphere	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0187786_100982132	3300017944	Tropical Peatland	MSIEKIKRRNNGTVDVDFYRQEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSTNSIFVSAEVPLVPTEPKIFE
Ga0187785_100120393	3300017947	Tropical Peatland	MSIEKIKRRNNGTVDVDFYRQEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREASPPSTNSIFVSAEVPLVPTEPKIFE
Ga0187785_100315032	3300017947	Tropical Peatland	MNIEKIKRLSNGTIDVDFYRQEAFLLRREATNRIFRRIRRGSRPLICVVTIIANYALLTPREPSSPGINSIFVSAEVPLVPTEPKK
Ga0187777_101978612	3300017974	Tropical Peatland	MSIEKIKRRNNGTVDVDFYRQEAFLLRREATNKLFRRIRRASRPFIGTVTLIANYALLTPREPSPPSTNSIFVSAEVPLVPTEPKIFE
Ga0184604_103049101	3300018000	Groundwater Sediment	MHMDKIRRRSNGTIDIDFYRDEAFLLRRAATNKFFRRIRRAGRPLIGVATIIANYALLTPREPLPPSTSSIFVSAEVPLLPTEPKK
Ga0187765_100149544	3300018060	Tropical Peatland	MSIEKIKRRDNGTVDVDFYRQEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSTNSIFVSAEVPLVPTEPKIFE
Ga0184611_10896872	3300018067	Groundwater Sediment	MHTGKINRRSNGTIDIDFYRQEAFLLRRQATNKFFRRLGRAGRPLIGVATIIANYALLTPRDPLPPSTNSIFVSANVPLLPTESEKNS
Ga0184635_101086501	3300018072	Groundwater Sediment	MHTGKINRRSNGTIDIDFYRQEAFLLRRQATNKFFRRLGRAGRPLIGVATIIANYTLLTPRDPLPPSTNSIFVSANVPLLPTESEKNS
Ga0193721_11736411	3300020018	Soil	MHIDKIRRRSNGTIDIDFYRDEAFLLRRAATNKFFRRIRRAGRPLIGVATIIANYALLTPREPLPPSTSSIFVSAEVPLLPTEPKK
Ga0126371_110046142	3300021560	Tropical Forest Soil	MNIEKIKRRSNGTIDVDFYRQEAFLFRREATNKLFRRIRRASRPLIGTVTIIANYGLLTPREPSPPNANSIFVSAEIPLMPTEPKK
Ga0126371_123259452	3300021560	Tropical Forest Soil	MNTEKTKRLSNGTIDVDFYRQEAFLLRREATNKLFRRIRRGSRPLIGVVTIIANYTLLTPREPSPPSINSIFVSAEVPLVPTEPKK
Ga0207710_103875112	3300025900	Switchgrass Rhizosphere	FLQRSKRSIGIELENRGVMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207688_100518533	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDNEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207680_100020362	3300025903	Switchgrass Rhizosphere	MNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207647_104419852	3300025904	Corn Rhizosphere	RRLRFLQKSKRSIGIELENRGVMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207654_100332111	3300025911	Corn Rhizosphere	NGTVDVDLYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207657_100535713	3300025919	Corn Rhizosphere	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207649_101178663	3300025920	Corn Rhizosphere	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVALVPTEPKIIK
Ga0207694_103544192	3300025924	Corn Rhizosphere	MNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207650_100535272	3300025925	Switchgrass Rhizosphere	MDIEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207687_100648003	3300025927	Miscanthus Rhizosphere	RLRFLQKNIRSIGTELENRGVMDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207644_108159491	3300025931	Switchgrass Rhizosphere	RSKRSIGIELENRGVMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207690_116629761	3300025932	Corn Rhizosphere	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKNNQVRA
Ga0207706_112227771	3300025933	Corn Rhizosphere	EHAMNIEKVKRRSNGTVDVDFYRQEAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK
Ga0207709_105889952	3300025935	Miscanthus Rhizosphere	VMDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207691_100558144	3300025940	Miscanthus Rhizosphere	MDIEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKNNQVRA
Ga0207661_105293392	3300025944	Corn Rhizosphere	VMDIEKIKRRTNGTVDVDFYRQEAFLHRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207639_102040851	3300026041	Corn Rhizosphere	EKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0207683_1000090829	3300026121	Miscanthus Rhizosphere	MDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNSSIFVSAEVPLVPTEPKIIK
Ga0208525_10053433	3300027288	Soil	LQKNIRSIGTELENRGVMDNEKIKRRTNGTVDVDFYRQEAFLQRREATNKFFRHIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0307293_102734822	3300028711	Soil	MDEVMHTGKINRRSNGTIDIDFYRQEAFLLRRQATNKFFRRLGRAGRPLIGVATIIANYALLTPRDPLPPSTNSIFVSA
Ga0307299_101953471	3300028793	Soil	IDFYRKEAFLLRRQATNKFFRRLGRAGRPLIGVATIIANYALLTPRDPLPPSTNSIFVSANVPLLPTESEKNS
Ga0247824_110176612	3300028809	Soil	AMNTEKVKRRSNGTVDVDFYRQAAFLLRREATNKLFKRIRRASRPLIGTVTIIANYALLTPRESSPPSANSIFVSAEVPLMTTEPKK
Ga0307302_102934701	3300028814	Soil	MHIENVRRRRNGTIDVDFYRREAFLLRRAATNKLFRRVGKLGRPLVRVATIIVTYALLSPRDPLPPSTGSLFVSANVPLLPSEPKT
Ga0307498_101031421	3300031170	Soil	VMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0307499_101578491	3300031184	Soil	HTGKINRRSNGTIDIDFYRQEAFLLRRQATNKFFRRLGRAGRPLIGVATIIANYALLTPRDPLPPSTNSIFVSANVPLLPTESEKNS
Ga0170824_1121995983	3300031231	Forest Soil	MHTGKINRRGNGTIDIDFYRQEAFLLRRQATNKFFRRLGRAGRPLIGVATIIANYALLTPRDPLPPSTNSISVSANVPLMPTESEKNS
Ga0170820_146943434	3300031446	Forest Soil	MHTGKINRRGNGTIDIDFYRQEAFLLRRQATNKFFRRLGRAGRPLIGVATIIANYALLTPRDPLPPSTNSIFVSANVPLMPTESEKNS
Ga0318538_100054482	3300031546	Soil	MNIEKIKRLRNGTIDVDFYRQETFRLRREATNKLFSRIRRASRPLIGAVTIIANYALLTPREPSPPSTNSIFVSAEVPLAPTQPKK
Ga0310915_100009174	3300031573	Soil	MNIEKIKRLRNGTIDVDFYRQETFRLRREATNKLFSRIRRASRPLIGAVTIIANYALLTPREPSPPSTNSIFVSAEVPLAPTEPKK
Ga0318560_102126721	3300031682	Soil	MNIEKIKRLRNGTIDVDFYRQETFRLRREATNKLFGGIGRASRPLIGAVTIIANYALLTPREPSPPRTNSIFV
Ga0318492_104794502	3300031748	Soil	MNIEKIKRLRNGTIDVDFYRQETFRLRREATNKLFSRIRRASRPLIGAVTIIANYALLTPREPSPPSTNSIFVSAEVPVAP
Ga0318509_105764741	3300031768	Soil	MNIEKIKRLRNGTIDVDFYRQETFRLRREATNKLFSRIRWASRPLIGAVTIIANYALLTPREPSPPSTNSIFVSAEVPLAPTEPKK
Ga0318546_100486693	3300031771	Soil	MNIEKIKRLRNGTIDVDFYRQETFRLRREATNKLFSRIRRASRPLIGAVTIIAIYALLTPREPSPPSTNSIFLSA
Ga0310892_102000182	3300031858	Soil	VMNIEKIKRRTNGTVDVDFYREEAFLLRRDATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0310891_100039713	3300031913	Soil	MNIEKIKRRTNGTVDVDFYREEAFLLRRDATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0310913_100250561	3300031945	Soil	MNIEKIKRLRNGTIDVDFYRQETFRLRREATNKLFSRIRRASRPLIGAVTIIANYALLTPREPSPPSTNSIFVSAEVPLAP
Ga0318577_100342642	3300032091	Soil	MNIEKIKRLRNGTIDVDFYRQETFRLRREATNKLFRRIRQASRPLIGAVTIIANYALLTPREPSPPSTNSIFVSAEVPLAPTEPKK
Ga0310889_100786653	3300032179	Soil	IGIELENRGVMNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0307471_1007355972	3300032180	Hardwood Forest Soil	MSIEKTKRRSNGTIDVDFYRQEAFLLRREVTNKLFRRIRRASRPLIGAATIIANYALLTPREPSPPSTNSIFVSAEVPLLPTEPKK
Ga0307472_1006308512	3300032205	Hardwood Forest Soil	NGTVDVDFYREEAFLLRRDATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0373950_0035484_680_937	3300034818	Rhizosphere Soil	EKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTVTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKIIK
Ga0373959_0215606_256_513	3300034820	Rhizosphere Soil	MNIEKIKRRTNGTVDVDFYREEAFLLRREATNKFFRRIRRASRPFIGTLTLIANYALLTPREPSPPSNNSIFVSAEVPLVPTEPKI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059727

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences