Metagenome / Metatranscriptome Family F059723

Basic Information
Family ID	F059723
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	106 residues
Representative Sequence	PYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Number of Associated Samples	115
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.25 %
% of genes from short scaffolds (< 2000 bps)	95.49 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (90.226 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (20.301 % of family members)
Environment Ontology (ENVO)	Unclassified (35.338 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.383 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.00% β-sheet: 36.00% Coil/Unstructured: 58.00%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00528	BPD_transp_1	20.30
PF00496	SBP_bac_5	5.26
PF00005	ABC_tran	3.01
PF08352	oligo_HPY	1.50
PF06738	ThrE	0.75
PF05368	NmrA	0.75
PF13490	zf-HC2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2966	Uncharacterized membrane protein YjjP, DUF1212 family	Function unknown [S]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.23 %
Unclassified	root	N/A	9.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.23 %
Unclassified	root	N/A	9.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.23 %
Unclassified	root	N/A	9.77 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.45 %
Unclassified	root	N/A	9.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	74.44 %
Unclassified	root	N/A	9.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.35 %
Unclassified	root	N/A	9.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	37.59 %
Unclassified	root	N/A	9.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.59 %
Unclassified	root	N/A	9.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725002\|GPICC_F5MS3JC01BYSBD	Not Available	531	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig552990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300000956\|JGI10216J12902_107257402	All Organisms → cellular organisms → Bacteria → Terrabacteria group	907	Open in IMG/M
3300004463\|Ga0063356_104037682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300004798\|Ga0058859_10122939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1021	Open in IMG/M
3300004800\|Ga0058861_10170794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300004803\|Ga0058862_10261688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300005329\|Ga0070683_100925579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300005329\|Ga0070683_101783887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300005333\|Ga0070677_10379040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300005334\|Ga0068869_101981129	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300005338\|Ga0068868_100501274	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1063	Open in IMG/M
3300005341\|Ga0070691_10012323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3915	Open in IMG/M
3300005345\|Ga0070692_10513791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300005353\|Ga0070669_100733949	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300005354\|Ga0070675_100981221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300005441\|Ga0070700_101100696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300005457\|Ga0070662_100774892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300005543\|Ga0070672_101844151	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005544\|Ga0070686_101713333	Not Available	534	Open in IMG/M
3300005549\|Ga0070704_100839851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300005564\|Ga0070664_101623516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300005615\|Ga0070702_100076399	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300005713\|Ga0066905_101812517	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005719\|Ga0068861_100365734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1270	Open in IMG/M
3300006854\|Ga0075425_102338058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300006881\|Ga0068865_100885400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300009098\|Ga0105245_10765900	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1002	Open in IMG/M
3300009101\|Ga0105247_11282765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300009156\|Ga0111538_12280433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300009168\|Ga0105104_10769586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300009527\|Ga0114942_1373407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300009870\|Ga0131092_10954284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300010375\|Ga0105239_11668636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300011332\|Ga0126317_10375122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300011333\|Ga0127502_10018685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300011422\|Ga0137425_1137660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300012480\|Ga0157346_1025921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300012500\|Ga0157314_1053878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300012885\|Ga0157287_1069177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300012904\|Ga0157282_10293953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300012908\|Ga0157286_10050415	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1065	Open in IMG/M
3300012910\|Ga0157308_10041944	Not Available	1151	Open in IMG/M
3300012914\|Ga0157297_10000226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9923	Open in IMG/M
3300012914\|Ga0157297_10074508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300012943\|Ga0164241_10201025	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300012943\|Ga0164241_10599325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300012955\|Ga0164298_10600020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300012960\|Ga0164301_10720991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300013102\|Ga0157371_11486312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300013307\|Ga0157372_12616128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300013769\|Ga0119887_1219682	Not Available	522	Open in IMG/M
3300014965\|Ga0120193_10075921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300014968\|Ga0157379_10066547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3221	Open in IMG/M
3300015077\|Ga0173483_10567498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300015372\|Ga0132256_100120088	All Organisms → cellular organisms → Bacteria	2591	Open in IMG/M
3300015373\|Ga0132257_103911035	Not Available	542	Open in IMG/M
3300015374\|Ga0132255_101368613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1069	Open in IMG/M
3300015374\|Ga0132255_101390372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300017965\|Ga0190266_10055669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1425	Open in IMG/M
3300018466\|Ga0190268_10032282	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300018469\|Ga0190270_12538671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300018481\|Ga0190271_10395257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1475	Open in IMG/M
3300018481\|Ga0190271_12175648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300018481\|Ga0190271_13275148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300019356\|Ga0173481_10633692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300019361\|Ga0173482_10112879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1005	Open in IMG/M
3300019362\|Ga0173479_10101884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1065	Open in IMG/M
3300019362\|Ga0173479_10109848	Not Available	1038	Open in IMG/M
3300019377\|Ga0190264_11264484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300019767\|Ga0190267_10409486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300022898\|Ga0247745_1081939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300022901\|Ga0247788_1003510	All Organisms → cellular organisms → Bacteria	2482	Open in IMG/M
3300023073\|Ga0247744_1049798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300023077\|Ga0247802_1003866	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300023102\|Ga0247754_1133350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300025223\|Ga0207672_1008634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300025321\|Ga0207656_10103378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1308	Open in IMG/M
3300025893\|Ga0207682_10280282	Not Available	779	Open in IMG/M
3300025911\|Ga0207654_10463113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300025913\|Ga0207695_10719477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300025919\|Ga0207657_10847559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300025919\|Ga0207657_10852497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300025920\|Ga0207649_11193858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300025921\|Ga0207652_11835910	Not Available	511	Open in IMG/M
3300025925\|Ga0207650_11347747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300025927\|Ga0207687_10022518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4194	Open in IMG/M
3300025932\|Ga0207690_10954346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300025932\|Ga0207690_11664189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300025933\|Ga0207706_10164963	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300025934\|Ga0207686_11583979	Not Available	541	Open in IMG/M
3300025937\|Ga0207669_10822517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300025938\|Ga0207704_10397817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300025940\|Ga0207691_11424241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300025942\|Ga0207689_10323311	Not Available	1280	Open in IMG/M
3300025942\|Ga0207689_11243587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300025949\|Ga0207667_10688201	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1026	Open in IMG/M
3300025949\|Ga0207667_11038913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300026035\|Ga0207703_10403550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300026118\|Ga0207675_100676681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1039	Open in IMG/M
3300026121\|Ga0207683_10391993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1277	Open in IMG/M
3300028379\|Ga0268266_11303759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300028380\|Ga0268265_11404278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300028587\|Ga0247828_10834805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300028587\|Ga0247828_11239941	Not Available	501	Open in IMG/M
3300028589\|Ga0247818_10656679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300028589\|Ga0247818_10936589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300028592\|Ga0247822_10798495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300028592\|Ga0247822_11082215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300028596\|Ga0247821_10319989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	950	Open in IMG/M
3300028596\|Ga0247821_10610690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300028597\|Ga0247820_10819021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300028812\|Ga0247825_10381878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300028812\|Ga0247825_10524686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	844	Open in IMG/M
3300028812\|Ga0247825_10844071	All Organisms → cellular organisms → Bacteria → Terrabacteria group	662	Open in IMG/M
3300030336\|Ga0247826_10842984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300030336\|Ga0247826_11229145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300031226\|Ga0307497_10739293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300031740\|Ga0307468_101413892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300031858\|Ga0310892_10399511	All Organisms → cellular organisms → Bacteria → Terrabacteria group	894	Open in IMG/M
3300031913\|Ga0310891_10367499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300031943\|Ga0310885_10180919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1030	Open in IMG/M
3300032003\|Ga0310897_10144566	Not Available	993	Open in IMG/M
3300032013\|Ga0310906_10798923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300032075\|Ga0310890_10804591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300033550\|Ga0247829_10126574	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300033551\|Ga0247830_10154475	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300034643\|Ga0370545_165733	Not Available	515	Open in IMG/M
3300034662\|Ga0314783_178019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300034664\|Ga0314786_080492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300034668\|Ga0314793_169994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300034673\|Ga0314798_166402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300034678\|Ga0314803_086738	All Organisms → cellular organisms → Bacteria → Terrabacteria group	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.89%
Host-Associated	Host-Associated	40.60%
Engineered	Engineered	1.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.14%
Plants	Host-Associated → Plants	38.35%
Aquatic	Environmental → Aquatic	3.76%
Human	Host-Associated → Human	2.26%
Wastewater	Engineered → Wastewater	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.79%
Freshwater	Environmental → Aquatic → Freshwater	3.01%
Digestive System	Host-Associated → Human → Digestive System	2.26%
Sediment	Environmental → Aquatic → Sediment	0.75%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.75%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.02%
Loam	Environmental → Terrestrial → Soil → Loam	7.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.26%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.75%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	20.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.76%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.26%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.75%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	20.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.02%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.26%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.26%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.26%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.26%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.75%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.75%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.75%
Sewage Treatment Plant	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Sewage Treatment Plant	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013769	Sewage treatment plant microbial communities from Vermont, USA - Sand_B	Engineered	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025223	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_01785920	2067725002	Soil	DGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGIAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
KansclcFeb2_16572330	2124908045	Soil	DYADPYDFVNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRENPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
JGI10216J12902_1072574021	3300000956	Soil	HNNYSYFNVAKYNRQMTAASLLTGSKRGSAYAALDGALMRENPPWAPLVNSNDRIFLSSRVGCVTVNEAHGSGPLLNVVCLK*
Ga0063356_1040376821	3300004463	Arabidopsis Thaliana Rhizosphere	NYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK*
Ga0058859_101229392	3300004798	Host-Associated	FDMTVERWGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0058861_101707941	3300004800	Host-Associated	FDMTVERWGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNLLCLK*
Ga0058862_102616882	3300004803	Host-Associated	LDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0070683_1009255792	3300005329	Corn Rhizosphere	TVERWGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0070683_1017838872	3300005329	Corn Rhizosphere	ILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0070677_103790402	3300005333	Miscanthus Rhizosphere	PQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRENPPWAPLVNRTDRTLLSNRVGCITINEAHGSGPLLNVVCMK*
Ga0068869_1019811292	3300005334	Miscanthus Rhizosphere	TVERWGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0068868_1005012741	3300005338	Miscanthus Rhizosphere	DFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0070691_100123235	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	NILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNLLCLK*
Ga0070692_105137911	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	PYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0070669_1007339492	3300005353	Switchgrass Rhizosphere	TADFDLTIERWGADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK*
Ga0070675_1009812212	3300005354	Miscanthus Rhizosphere	DGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0070700_1011006961	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	NILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0070662_1007748921	3300005457	Corn Rhizosphere	DYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0070672_1018441512	3300005543	Miscanthus Rhizosphere	LLPRAQQFTNAGNPQTATSDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRENPPWAPLVNRTDRTLLSNRVGCITINEAHGSGPLLNVVCMK*
Ga0070686_1017133331	3300005544	Switchgrass Rhizosphere	QVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK*
Ga0070704_1008398512	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	IGIDAEVKLLPRAQQFTNAGNPKTADFDLTIERWGADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK*
Ga0070664_1016235162	3300005564	Corn Rhizosphere	PYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0070702_1000763991	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	NILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0066905_1018125171	3300005713	Tropical Forest Soil	QHNNYAYFNVAKFNQQMTAASLLTGSKRGTAYAALDGAMMRENPPWAPLVNSNDRSFLSSRVGCITINEAQGSGPLLNVVCVK*
Ga0068861_1003657341	3300005719	Switchgrass Rhizosphere	LLPRAQQFTNAGNPKTADFDLTIERWGADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK*
Ga0075425_1023380581	3300006854	Populus Rhizosphere	AYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0068865_1008854002	3300006881	Miscanthus Rhizosphere	DGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0105245_107659001	3300009098	Miscanthus Rhizosphere	NILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGIAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0105247_112827652	3300009101	Switchgrass Rhizosphere	KQIGIDAEVKLLPRAQQFTNAGNPKTADFDLTIERWGADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK*
Ga0111538_122804331	3300009156	Populus Rhizosphere	LDAEIRLLPRAQQFTNAGNPQTATFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNRTDRILLSNRVGCITVNEAHGSGPLLNVVCMK*
Ga0105104_107695861	3300009168	Freshwater Sediment	KQMGLDAEVRLLPRAQQFTNAGNPETATFDMTMERWGADYADPYDFVNILLDGAQVKNPQHNNYAYFNVAKYNRQMTTASLLTGPRRGAAYAALDGALMRENPPWAPLVNSNDRSFMSARVGCITINEAHGSGPLLNVICLK*
Ga0114942_13734071	3300009527	Groundwater	PKTATFDMTIERWGADYADPYDFVNILLDGNQVANSQHNNYAYFNVAKYNQQMNAASLLTGSTRGTAYAALDAAMMKDNPPWAPLVNSNDRNFMSARVGCLTLNMAQGGGPLLNVMCLK*
Ga0131092_109542842	3300009870	Activated Sludge	DAEIKLLPRAQQFTNAGNPQTATFDMTVERWGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0105239_116686361	3300010375	Corn Rhizosphere	GKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNLLCLK*
Ga0126317_103751221	3300011332	Soil	WGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVAINEISATGPLLNVLCLK*
Ga0127502_100186851	3300011333	Soil	KQIGLDAEIRLLPRAQQFTNAGNPQTATFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRDNPPWAPLVNRTDRILLSNRVGCITVNEAHGSGPLLNVVCMK*
Ga0137425_11376601	3300011422	Soil	NVAKYTRLMTTASLLTGSKRGTAYAALDGAMMRENPPWAPLVNSNDRIFLSSRVGCITVNEAHGSGPVLNSVCIK*
Ga0157346_10259211	3300012480	Arabidopsis Rhizosphere	PQTASFDMTVERWGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0157314_10538782	3300012500	Arabidopsis Rhizosphere	DYPDPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSRPLLNVICVK*
Ga0157287_10691771	3300012885	Soil	DPYDFLNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK*
Ga0157282_102939531	3300012904	Soil	IERWGSDYADPYDFVNILLDGAQVTNPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0157286_100504152	3300012908	Soil	DGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGIAYAGLDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0157308_100419441	3300012910	Soil	QPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEITGTGPLLNVLCLK*
Ga0157297_100002261	3300012914	Soil	ILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK*
Ga0157297_100745081	3300012914	Soil	KQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0164241_102010253	3300012943	Soil	DGKLATQQHHNIYAYYNVAKYIKEMPAESLRTSPKRVVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEITGTGPLLNVLCLK*
Ga0164241_105993251	3300012943	Soil	QHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRANPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0164298_106000202	3300012955	Soil	DLTIERWGADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNQEMTAASLLTGPKRGGAYAALDGNMMRTNPPWAPLGNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0164301_107209912	3300012960	Soil	ERWGADYADPYDFVNILLDGKQVTQPQHNNYAYFNVAKYNRQMTAASLLTGPKRGAAYAALDGQVMRENPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK*
Ga0157371_114863121	3300013102	Corn Rhizosphere	AYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0157372_126161282	3300013307	Corn Rhizosphere	YDFLNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK*
Ga0119887_12196821	3300013769	Sewage Treatment Plant	DGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGSKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSAHVGCVTINEISATGPLLNVLCLK*
Ga0120193_100759211	3300014965	Terrestrial	LSIPPTPPLSPATLIAPLQAQLIQYNLRQIGLDAEIRLLPRAQQFTNAGNPQTATFDLTVERWGSDYADPYDFVNILLDGKQVTQPQHNNYAYFNIAKYNRQMTAASLLTGSKRGAAYAALDGAIMRENPPWAPLVNSNDRIFLSNRVGCITVNEAHGSGPLLNVVCIK*
Ga0157379_100665471	3300014968	Switchgrass Rhizosphere	YAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK*
Ga0173483_105674981	3300015077	Soil	DGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGIAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0132256_1001200884	3300015372	Arabidopsis Rhizosphere	LDGSQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK*
Ga0132257_1039110351	3300015373	Arabidopsis Rhizosphere	DFLNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0132255_1013686132	3300015374	Arabidopsis Rhizosphere	WGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNQEMTAASLLQGPKRGIAYASLDSNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK*
Ga0132255_1013903722	3300015374	Arabidopsis Rhizosphere	GADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYSALDANMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEITGTGPLLNVLCLK*
Ga0190266_100556691	3300017965	Soil	KQVTQSQHNNYAYFNVAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFLSSRVACITVNEAHGSGPLLNVICLK
Ga0190268_100322821	3300018466	Soil	TNAGNPQTATFDMTIERWGSDYADPYDFVNILLDGAQVTNPQHNNYAYFNVAKYNRQMTAASLLTGSKRGTAYAALDGAMMRENPPWAPLVNSNDRIFLSSRVGCITVNEAHGSGPVLNSVCIK
Ga0190270_125386711	3300018469	Soil	NPQTATFDMTIERWGSDYADPYDFVNILLDGAQVTNPQHNNYAYFNVAKYNRQMTTASLLTGSKRGTAYAALDGAMMRENPPWAPLVNSNDRIFLSSRVGCITVNEAHGSGPVLNSVCIK
Ga0190271_103952571	3300018481	Soil	MTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYSYFNIAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFMSARVSCITVNEAHGSGPLLNVICLK
Ga0190271_121756481	3300018481	Soil	LIQYNLKQIGLDAEIRLLPRAQQFTNAGNPQTATFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGPKRGAAYAALDGALMRENPPWAPLVNRTDRTLLSNRVGCITVNEAHGSGPLLNVVCMK
Ga0190271_132751481	3300018481	Soil	MTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYSYFNIAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFMSSRVACITVNEAHGSGPLLNVVCLK
Ga0173481_106336921	3300019356	Soil	IDAEIKLLPRAQQFTNAGNPQTATFDMTVERWGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRSNPPWAPLGNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
Ga0173482_101128792	3300019361	Soil	GADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK
Ga0173479_101018841	3300019362	Soil	HRRPAWIGTTLALCALALGTLKLLPRAQQFTNAGNPQTASFDMTVERWGADYADPYDFLNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
Ga0173479_101098481	3300019362	Soil	ILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK
Ga0190264_112644841	3300019377	Soil	NLRQIGLDAEIRLLPRAQQFTNAGNPQTATFDLTVERWGADFADPYDFINILLDGSQVKNPQHNNYAYFNVAKYNRQMLAASLVTGAKRGQAYAALDRALMQENPPWAPLVNSNDRSFMSARVGCITINEAHGSGPLLNVICLK
Ga0190267_104094861	3300019767	Soil	QQFTTARNAQTATYDLTLERWGSDYADPYDFVNILLDGAQVTNPQHNNYAYFNVAKYNRQMTAASLLTGSKRGTAYAALDGAMMRENPPWAPLVNSNDRIFLSSRVGCITVNEAHGSGPVLNSVCIK
Ga0247745_10819392	3300022898	Soil	YADPYDFLNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
Ga0247788_10035103	3300022901	Soil	QHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK
Ga0247744_10497981	3300023073	Soil	DGSQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK
Ga0247802_10038663	3300023077	Soil	FTNAGNPQTATFDMTVERWGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK
Ga0247754_11333501	3300023102	Soil	IRLLPRAQQFTNAGNPQTATFDMTIERWGSDYADPYDFVNILLDGAQVTNPQHNNYAYFNVAKYNRQMTTASLLTGSKRGTAYAALDGAMMRENPPWAPLVNSNDRIFLSSRVGCITVNEAHGSGPILNAVCMK
Ga0207672_10086342	3300025223	Corn, Switchgrass And Miscanthus Rhizosphere	QHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
Ga0207656_101033782	3300025321	Corn Rhizosphere	VTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEITGTGPLLNVLCLK
Ga0207682_102802821	3300025893	Miscanthus Rhizosphere	QVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRENPPWAPLVNRTDRTLLSNRVGCITINEAHGSGPLLNVVCMK
Ga0207654_104631132	3300025911	Corn Rhizosphere	ADPYDFLNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0207695_107194772	3300025913	Corn Rhizosphere	ADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISATGPLLNVLCLK
Ga0207657_108475592	3300025919	Corn Rhizosphere	LLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0207657_108524972	3300025919	Corn Rhizosphere	LLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
Ga0207649_111938582	3300025920	Corn Rhizosphere	DFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0207652_118359101	3300025921	Corn Rhizosphere	LNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
Ga0207650_113477472	3300025925	Switchgrass Rhizosphere	GNPKTADFDLTIERWGADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICV
Ga0207687_100225181	3300025927	Miscanthus Rhizosphere	DFLNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
Ga0207690_109543461	3300025932	Corn Rhizosphere	DYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYSALDANMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEITGTGPLLNVLCLK
Ga0207690_116641891	3300025932	Corn Rhizosphere	TVERWGADYADPYDFLNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
Ga0207706_101649633	3300025933	Corn Rhizosphere	GSQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK
Ga0207686_115839792	3300025934	Miscanthus Rhizosphere	PYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0207669_108225171	3300025937	Miscanthus Rhizosphere	FMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0207704_103978172	3300025938	Miscanthus Rhizosphere	DMTVERWGADYADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0207691_114242411	3300025940	Miscanthus Rhizosphere	TIERWGSDYADPYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRENPPWAPLVNRTDRTLLSNRVGCITINEAHGSGPLLNVVCMK
Ga0207689_103233112	3300025942	Miscanthus Rhizosphere	KQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0207689_112435872	3300025942	Miscanthus Rhizosphere	FNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK
Ga0207667_106882011	3300025949	Corn Rhizosphere	FNVAKYNREMTAASLLQGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSARVGCVTINEISSTGPLLNVLCLK
Ga0207667_110389132	3300025949	Corn Rhizosphere	ADPYDFMNILLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLQGPKRGVAYAALDGNMMRSNPPWAPLVNSNDRIFLSSRVGCVTINEISATGPLLNVLCLK
Ga0207703_104035502	3300026035	Switchgrass Rhizosphere	IQYNRKQIGIDAEVKLRPRAQQFTNAGNPKTADFDLTIERWGADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK
Ga0207675_1006766812	3300026118	Switchgrass Rhizosphere	DAEVKLLPRAQQFTNAGNPKTADFDLTIERWGADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK
Ga0207683_103919932	3300026121	Miscanthus Rhizosphere	LKQIGIDAEVKLLPRAQQFTNAGNPKTADFDLTIERWGADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK
Ga0268266_113037591	3300028379	Switchgrass Rhizosphere	HNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0268265_114042782	3300028380	Switchgrass Rhizosphere	NVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK
Ga0247828_108348052	3300028587	Soil	IQYNLKQIGLDAEIRLLPRAQQFTNAGNPQTATFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRDNPPWAPLVNRTDRILLSNRVGCITVNEAHGSGPLLNVVCMK
Ga0247828_112399412	3300028587	Soil	LDGKQVTQSQHNNYSYFNVAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFLSSRVACITVNEAHGSGPLLNVVCLK
Ga0247818_106566792	3300028589	Soil	DGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRDNPPWAPLVNRTDRILLSNRVGCITVNEAHGSGPLLNVVCMK
Ga0247818_109365892	3300028589	Soil	GSDYADPYDFVNILLDGAQVTNPQHNNYAYFNVAKYNRQMTTASLLTGSKRGTAYAALDGAMMRENPPWAPLVNSNDRIFLSSRVGCITVNEAHGSGPILNAVCMK
Ga0247822_107984952	3300028592	Soil	TAQNAETATYDMTLERWGSDYADPYDFVNILLDGKLTTQSSHNNFAYFNVAKYNRQMTAASLLTGPRRGAAYAALDGAMMRENPPWAPIVNRTDRVFLSSRVGCITVNEAHGSGPILNVVCIK
Ga0247822_110822152	3300028592	Soil	PRAQQFTNAGNPQTASFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRDNPPWAPLVNRTDRILLSNRVGCITVNEAHGSGPLLNVVCMK
Ga0247821_103199891	3300028596	Soil	PRAQQFTNAGNPQTASFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYSYFNVAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFLSSRVACITVNEAHGSGPLLNVICLK
Ga0247821_106106902	3300028596	Soil	YNLKQIGLDAEIRLLPRAQQFTNAGNPQTATFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRDNPPWAPLVNRTDRILLSNRVGCITVNEAHGSGPLLNVVCMK
Ga0247820_108190211	3300028597	Soil	DYADPYDFVNILLDGAQVTNPQHNNYAYFNVAKYNRQMTTASLLTGSKRGTAYAALDGAMMRDNPPWAPLVNSNDRIFLSSRVGCITVNEAHGSGPVLNAVCIK
Ga0247825_103818781	3300028812	Soil	PQTATYDLTLERWGSDYADPYDFVNILLDGKQITQAAHNNFAYFNIGKYNSQMLAASLLTGPRRGTAYAALDGVIMRENPPWAPLVNSSDRSFLSARTGCITINEAHGSGPLLNVVCLK
Ga0247825_105246862	3300028812	Soil	PYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRDNPPWAPLVNRTDRILLSNRVGCITVNEAHGSGPLLNVVCMK
Ga0247825_108440712	3300028812	Soil	VNILLDGKQVTQSQHNNYSYFNVAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFLSSRVACITVNEAHGSGPLLNVVCLK
Ga0247826_108429842	3300030336	Soil	SFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYAYFNVAKYNRQMTAASLLTGTKRGAAYAALDGALMRDNPPWAPLVNRTDRILLSNRVGCITVNEAHGSGPLLNVVCMK
Ga0247826_112291451	3300030336	Soil	ATYDMTLERWGSDYADPYDFVNILLDGKLTTQSSHNNFAYFNVAKYNRQMTAASLLTGPRRGAAYAALDGAMMRENPPWAPIVNRTDRVFLSSRVGCITVNEAHGSGPILNVVCIK
Ga0307497_107392931	3300031226	Soil	AQQFTLAGNPQTATYDLTIERWGADYADPYDFINILLDGAQVSNPQHNNYAYFNSAKFNKQMTAASLLVGSSRGTAYATLDGAMMRENPPWAPIVNSNDRTFMSARTGCVTINEAHGSGPLLNIVCIK
Ga0307468_1014138921	3300031740	Hardwood Forest Soil	NNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRVFLSSKVGCLTINEAQGSGPLLNVICVK
Ga0310892_103995112	3300031858	Soil	NVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0310891_103674992	3300031913	Soil	GADYADPYDWVNILLDGTQVTHPQHNNYAYFNVAKYNREMTAASLLTGPSRGAAYAALDGTMMRNDPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK
Ga0310885_101809192	3300031943	Soil	TLERWGSDYADPYDFVNILLDGKQITQAAHNNFAYFNIGKYNSQMLAASLLTGPRRGTAYAALDGVIMRENPPWAPLVNSSDRSFLSARTGCITINEAHGSGPLLNVVCLK
Ga0310897_101445661	3300032003	Soil	LDGKLTTQSSHSNFAYFNVAKYNRQMTAASLLTGPRRGAAYAALDGAMMRENPPWAPIVNRTDRVFLSSRVGCITVNEAHGSGPILNVVCIK
Ga0310906_107989232	3300032013	Soil	LLDGAQVTNPQHNNYAYFNVAKYNRQMTTASLLTGSKRGTAYAALDGAMMRENPPWAPLVNSNDRIFLSSRVGCITVNEAHGSGPILNAVCMK
Ga0310890_108045912	3300032075	Soil	VNILLDGKLTTQSSHSNFAYFNVAKYNRQMTAASLLTGPRRGAAYAALDGAMMRENPPWAPIVNRTDRVFLSSRVGCITVNEAHGSGPILNVVCIK
Ga0247829_101265743	3300033550	Soil	LLDGKQVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNLLCLK
Ga0247830_101544751	3300033551	Soil	IQYNLRQIGLDAEIRLLPRAQQFTNAGNPQTASFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYSYFNVAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFLSSRVACITVNEAHGSGPLLNVVCLK
Ga0370545_165733_3_260	3300034643	Soil	NPQHNNYAYFNSAKFNKQMTAASLLVGSSRGTAYATLDGAMMRENPPWAPIVNSNDRTFMSARTGCVTINEAHGSGPLLNIVCIK
Ga0314783_178019_207_497	3300034662	Soil	VNILLDGNQVTQSQHNNYAYFNVAKYNRQMLAASLLTGTKRGTAYAALDGALMRDNPPWAPLVNSNDRIFLSNRVGCITVNEAHGSGPLLNVVCMK
Ga0314786_080492_2_376	3300034664	Soil	TNAGNPQTATFDMTIERWGSDYADPYDFVNILLDGKQVTQPQHNNYSYFNVAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFMSSRVGCITVNEAHGSGPLLNVACIK
Ga0314793_169994_1_444	3300034668	Soil	IQYNLRQIGLDAEIRLLPRAQQFTNAGNPQTASFDMTIERWGSDYADPYDFVNILLDGKQVTQSQHNNYSYFNVAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFMSSRVGCITVNEAHGSGPLLNVICLK
Ga0314798_166402_1_360	3300034673	Soil	PQTASFDMTIERWGSDYADPYDFVNILLDGKQVTQPQHNNYSYFNVAKYNRQMTAASLLTGSKRGTAYAALDGALMRENPPWAPLVNSNDRIFMSSRVGCITVNEAHGSGPLLNVVCLK
Ga0314803_086738_1_267	3300034678	Soil	QVTQPQHNNYAYFNVAKYNKEMTAASLLTGPKRGVAYAALDGNMMRTNPPWAPLVNSNDRIFLSSRVGCVTINEISGTGPLLNVLCLK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059723

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign