Metagenome / Metatranscriptome Family F059687

Basic Information
Family ID	F059687
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	44 residues
Representative Sequence	RWSAYWDKKHGVWRVAEDDPDSDLYAESSDADTVIGYITAHT
Number of Associated Samples	107
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.27 %
% of genes near scaffold ends (potentially truncated)	83.46 %
% of genes from short scaffolds (< 2000 bps)	92.48 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.045 % of family members)
Environment Ontology (ENVO)	Unclassified (22.556 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.105 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.71% β-sheet: 22.86% Coil/Unstructured: 61.43%
Feature Viewer

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Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF03869	Arc	4.51
PF05016	ParE_toxin	4.51
PF13376	OmdA	2.26
PF04149	DUF397	1.50
PF01844	HNH	1.50
PF01042	Ribonuc_L-PSP	1.50
PF01636	APH	1.50
PF00589	Phage_integrase	1.50
PF14031	D-ser_dehydrat	1.50
PF13391	HNH_2	1.50
PF13560	HTH_31	1.50
PF12697	Abhydrolase_6	1.50
PF00406	ADK	0.75
PF01965	DJ-1_PfpI	0.75
PF01872	RibD_C	0.75
PF12840	HTH_20	0.75
PF08240	ADH_N	0.75
PF07690	MFS_1	0.75
PF02467	Whib	0.75
PF07927	HicA_toxin	0.75
PF07714	PK_Tyr_Ser-Thr	0.75
PF03109	ABC1	0.75
PF02577	BFN_dom	0.75
PF03793	PASTA	0.75
PF13411	MerR_1	0.75
PF11356	T2SSC	0.75
PF03372	Exo_endo_phos	0.75
PF00005	ABC_tran	0.75
PF13581	HATPase_c_2	0.75
PF01909	NTP_transf_2	0.75
PF04191	PEMT	0.75
PF01243	Putative_PNPOx	0.75
PF00440	TetR_N	0.75
PF00571	CBS	0.75
PF06240	COXG	0.75
PF12680	SnoaL_2	0.75
PF08751	TrwC	0.75
PF13091	PLDc_2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.01
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.50
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.75
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.75
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.75
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.75
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.75
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.75
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.63 %
Unclassified	root	N/A	42.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.62 %
Unclassified	root	N/A	42.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.26 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.50 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44.36 %
Unclassified	root	N/A	42.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.50 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.26 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	5.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.01 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.01 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.50 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.50 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	4.51 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.76 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.01 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.01 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	3.01 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	1.50 %
Myxococcales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis	1.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.50 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.75 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.75 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	4.51 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.76 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	3.01 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.01 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.26 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	1.50 %
Enhygromyxa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa	1.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.50 %
Marmoricola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola	0.75 %
Actinophytocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	0.75 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	4.51 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.76 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	3.01 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.01 %
Enhygromyxa salina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	1.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.50 %
Catenulispora pinistramenti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinistramenti	0.75 %
Catenulispora pinisilvae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinisilvae	0.75 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.75 %
Marmoricola mangrovicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola mangrovicus	0.75 %
Streptomyces alboflavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces alboflavus	0.75 %
Actinophytocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	0.75 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	4.51 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.76 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	3.01 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.01 %
Enhygromyxa salina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	1.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.50 %
Streptomyces sp. WM6378	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WM6378	0.75 %
Catenulispora pinistramenti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinistramenti	0.75 %
Catenulispora pinisilvae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinisilvae	0.75 %
Marmoricola mangrovicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola mangrovicus	0.75 %
Streptomyces alboflavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces alboflavus	0.75 %
Actinophytocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	0.75 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_100220592	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005176\|Ga0066679_10085811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1889	Open in IMG/M
3300005329\|Ga0070683_101341002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	688	Open in IMG/M
3300005335\|Ga0070666_11060630	Not Available	602	Open in IMG/M
3300005434\|Ga0070709_10223880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1343	Open in IMG/M
3300005435\|Ga0070714_100165920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2001	Open in IMG/M
3300005435\|Ga0070714_100800885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	912	Open in IMG/M
3300005435\|Ga0070714_102188634	Not Available	538	Open in IMG/M
3300005467\|Ga0070706_101337128	Not Available	657	Open in IMG/M
3300005467\|Ga0070706_101993055	Not Available	526	Open in IMG/M
3300005531\|Ga0070738_10159285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089	Open in IMG/M
3300005534\|Ga0070735_10589747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	660	Open in IMG/M
3300005554\|Ga0066661_10733734	Not Available	579	Open in IMG/M
3300005591\|Ga0070761_10985856	Not Available	534	Open in IMG/M
3300005614\|Ga0068856_101086304	Not Available	818	Open in IMG/M
3300005841\|Ga0068863_102552972	Not Available	520	Open in IMG/M
3300005921\|Ga0070766_11224246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	520	Open in IMG/M
3300006028\|Ga0070717_12044207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300006954\|Ga0079219_10034813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2030	Open in IMG/M
3300009137\|Ga0066709_100477198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	1751	Open in IMG/M
3300009162\|Ga0075423_12708303	Not Available	543	Open in IMG/M
3300009174\|Ga0105241_10163318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1833	Open in IMG/M
3300009520\|Ga0116214_1059709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1386	Open in IMG/M
3300009665\|Ga0116135_1193993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300009672\|Ga0116215_1117297	Not Available	1190	Open in IMG/M
3300009698\|Ga0116216_10201297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WM6378	1222	Open in IMG/M
3300009839\|Ga0116223_10498288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	709	Open in IMG/M
3300010048\|Ga0126373_12713014	Not Available	553	Open in IMG/M
3300010335\|Ga0134063_10302822	Not Available	769	Open in IMG/M
3300010343\|Ga0074044_10543781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinistramenti	758	Open in IMG/M
3300010396\|Ga0134126_11706943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	691	Open in IMG/M
3300010876\|Ga0126361_10178895	Not Available	518	Open in IMG/M
3300010876\|Ga0126361_10548532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1239	Open in IMG/M
3300010876\|Ga0126361_10676862	Not Available	596	Open in IMG/M
3300010876\|Ga0126361_11101695	Not Available	1417	Open in IMG/M
3300011271\|Ga0137393_10240991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1534	Open in IMG/M
3300012198\|Ga0137364_10639762	Not Available	802	Open in IMG/M
3300012200\|Ga0137382_11154292	Not Available	552	Open in IMG/M
3300012206\|Ga0137380_10035181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4621	Open in IMG/M
3300012208\|Ga0137376_10306848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1377	Open in IMG/M
3300012209\|Ga0137379_10194285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1942	Open in IMG/M
3300012209\|Ga0137379_10755508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300012361\|Ga0137360_11865134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	507	Open in IMG/M
3300012395\|Ga0134044_1015828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300012507\|Ga0157342_1018360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	792	Open in IMG/M
3300012510\|Ga0157316_1020503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	719	Open in IMG/M
3300012532\|Ga0137373_11010011	Not Available	602	Open in IMG/M
3300013308\|Ga0157375_11803197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	725	Open in IMG/M
3300014657\|Ga0181522_10710288	Not Available	614	Open in IMG/M
3300015373\|Ga0132257_101006595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300017926\|Ga0187807_1058702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1195	Open in IMG/M
3300017942\|Ga0187808_10276785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	754	Open in IMG/M
3300017955\|Ga0187817_10947847	Not Available	551	Open in IMG/M
3300017970\|Ga0187783_10188920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1515	Open in IMG/M
3300018046\|Ga0187851_10823556	Not Available	522	Open in IMG/M
3300018085\|Ga0187772_11458978	Not Available	509	Open in IMG/M
3300020579\|Ga0210407_10512150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	938	Open in IMG/M
3300020582\|Ga0210395_10538216	All Organisms → cellular organisms → Bacteria → Terrabacteria group	878	Open in IMG/M
3300021403\|Ga0210397_10663123	Not Available	800	Open in IMG/M
3300021404\|Ga0210389_10768707	Not Available	753	Open in IMG/M
3300021405\|Ga0210387_10690696	Not Available	905	Open in IMG/M
3300021407\|Ga0210383_10077944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2773	Open in IMG/M
3300021407\|Ga0210383_10309330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1360	Open in IMG/M
3300021407\|Ga0210383_10403748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1179	Open in IMG/M
3300021407\|Ga0210383_10444436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1119	Open in IMG/M
3300021407\|Ga0210383_11507867	Not Available	556	Open in IMG/M
3300021433\|Ga0210391_10996405	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300021474\|Ga0210390_10153454	Not Available	1940	Open in IMG/M
3300021474\|Ga0210390_11450418	Not Available	545	Open in IMG/M
3300021476\|Ga0187846_10344366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	615	Open in IMG/M
3300021477\|Ga0210398_10547521	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300021477\|Ga0210398_11049717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	649	Open in IMG/M
3300022721\|Ga0242666_1208840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	501	Open in IMG/M
3300024222\|Ga0247691_1057743	Not Available	586	Open in IMG/M
3300024295\|Ga0224556_1095229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300025898\|Ga0207692_10710085	Not Available	653	Open in IMG/M
3300025910\|Ga0207684_10448493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1108	Open in IMG/M
3300025916\|Ga0207663_11473367	Not Available	548	Open in IMG/M
3300025928\|Ga0207700_10104129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinisilvae	2270	Open in IMG/M
3300025928\|Ga0207700_10870435	Not Available	806	Open in IMG/M
3300025928\|Ga0207700_10985788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300025929\|Ga0207664_10390130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1237	Open in IMG/M
3300025949\|Ga0207667_11598078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	621	Open in IMG/M
3300026078\|Ga0207702_10855468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	900	Open in IMG/M
3300026078\|Ga0207702_11553353	Not Available	655	Open in IMG/M
3300026326\|Ga0209801_1073951	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300026489\|Ga0257160_1027965	Not Available	921	Open in IMG/M
3300027641\|Ga0208827_1127659	Not Available	726	Open in IMG/M
3300027737\|Ga0209038_10087294	Not Available	939	Open in IMG/M
3300027795\|Ga0209139_10242234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	637	Open in IMG/M
3300027905\|Ga0209415_10076494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3907	Open in IMG/M
3300027905\|Ga0209415_10649163	Not Available	769	Open in IMG/M
3300028536\|Ga0137415_10730613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	802	Open in IMG/M
3300028808\|Ga0302228_10400667	Not Available	609	Open in IMG/M
3300028879\|Ga0302229_10183636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	960	Open in IMG/M
3300029943\|Ga0311340_10475121	Not Available	1125	Open in IMG/M
3300029943\|Ga0311340_11383901	Not Available	556	Open in IMG/M
3300029999\|Ga0311339_11004604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300030007\|Ga0311338_10782756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300030056\|Ga0302181_10384517	Not Available	608	Open in IMG/M
3300030494\|Ga0310037_10072813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1614	Open in IMG/M
3300030520\|Ga0311372_12316232	Not Available	612	Open in IMG/M
3300030580\|Ga0311355_10832163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces alboflavus	844	Open in IMG/M
3300030617\|Ga0311356_10071805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3663	Open in IMG/M
3300031028\|Ga0302180_10585645	Not Available	538	Open in IMG/M
3300031233\|Ga0302307_10631688	Not Available	539	Open in IMG/M
3300031234\|Ga0302325_10666185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1510	Open in IMG/M
3300031234\|Ga0302325_12246605	Not Available	662	Open in IMG/M
3300031234\|Ga0302325_12913895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola mangrovicus	556	Open in IMG/M
3300031236\|Ga0302324_100621045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1545	Open in IMG/M
3300031236\|Ga0302324_101086298	Not Available	1078	Open in IMG/M
3300031525\|Ga0302326_10326074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2434	Open in IMG/M
3300031564\|Ga0318573_10412322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300031708\|Ga0310686_112317260	Not Available	754	Open in IMG/M
3300031720\|Ga0307469_10371273	Not Available	1210	Open in IMG/M
3300031793\|Ga0318548_10517404	Not Available	583	Open in IMG/M
3300031896\|Ga0318551_10573485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300031942\|Ga0310916_11049136	Not Available	679	Open in IMG/M
3300032063\|Ga0318504_10541548	Not Available	558	Open in IMG/M
3300032068\|Ga0318553_10678447	Not Available	539	Open in IMG/M
3300032515\|Ga0348332_12844956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	856	Open in IMG/M
3300032770\|Ga0335085_10261521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2073	Open in IMG/M
3300032770\|Ga0335085_11477168	Not Available	709	Open in IMG/M
3300032770\|Ga0335085_11581079	Not Available	680	Open in IMG/M
3300032783\|Ga0335079_10156635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2552	Open in IMG/M
3300032783\|Ga0335079_11830986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300032805\|Ga0335078_10501290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1560	Open in IMG/M
3300032805\|Ga0335078_11989544	Not Available	623	Open in IMG/M
3300032892\|Ga0335081_12125003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300032893\|Ga0335069_11178338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	840	Open in IMG/M
3300032895\|Ga0335074_10346176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1657	Open in IMG/M
3300032895\|Ga0335074_11025982	Not Available	723	Open in IMG/M
3300033158\|Ga0335077_10282252	Not Available	1825	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.98%
Host-Associated	Host-Associated	9.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.21%
Plants	Host-Associated → Plants	9.02%
Aquatic	Environmental → Aquatic	6.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.42%
Peat	Environmental → Terrestrial → Peat	14.29%
Freshwater	Environmental → Aquatic → Freshwater	6.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.01%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.75%
Cave	Environmental → Terrestrial → Cave	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	12.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.26%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.01%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.05%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.01%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.01%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.75%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.75%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059687

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1002205923	3300004091	Bog Forest Soil	WSAFWDKKRGVWQVAEDDPDSDFHAESPDASTVIAYMKSHS*
Ga0066679_100858111	3300005176	Soil	KLAPMPRWSVCWDKKYGLWRVAEDDPDSDLYAESSDADAVIGYIMAHA*
Ga0070683_1013410021	3300005329	Corn Rhizosphere	FLADQPRWSIYWDKKYGLWRVAEDDPDSDLYAESSDADTVIRYIMAHC*
Ga0070666_110606302	3300005335	Switchgrass Rhizosphere	PRWSIYWDKKYGLWRVAEDDPDSDLYAESSDADTVIRYIMAHC*
Ga0070709_102238802	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VVIYWDKKYGLWRVAEDDPDSDLYAESSDADTVIRYIVAHA*
Ga0070714_1001659203	3300005435	Agricultural Soil	LHPGWSAFWDKAYGVWRAAEDDPCSDLYTETPDPTAVIRYITACS*
Ga0070714_1008008851	3300005435	Agricultural Soil	SVFWDKRDGLWRVAEDDPDSDLYAEAANADTVIDYMVAHS*
Ga0070714_1021886342	3300005435	Agricultural Soil	LADQPRWSIYWDKKYGLWRVAEDDPDSDLYAESSDADTVIRYIMAHC*
Ga0070706_1013371281	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSPGGDKKYGLWRVAEDDPDSDLYAESSDADTVISYFMAHT*
Ga0070706_1019930552	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAGRPRWSVFWDKAYGVWRAAEDDPDSVLYTESRDADTVIGYIATHS*
Ga0070738_101592851	3300005531	Surface Soil	PQWSAFWDKRNGLWRVADDDPYSDLYAASADADKVIAYMAAHS*
Ga0070735_105897472	3300005534	Surface Soil	LADHPRWSAWWDKKHGLWRVAEDDQDSDLYAESSDADTVMDYITAHA*
Ga0066661_107337342	3300005554	Soil	RASTRPAHLGDKLAPMPRWSVCWDKKYGLWRVAEDDPDSDLYAESSDADAVIGYIMAHA*
Ga0070761_109858561	3300005591	Soil	WDKASGVWRVTEDDPDSALHAESSDAATVVSYIQSHA*
Ga0068856_1010863041	3300005614	Corn Rhizosphere	FLADQPRWSIYWDKKYGLWRVAEDDPDSDLYAESSDADTVIGYIVAHA*
Ga0068863_1025529721	3300005841	Switchgrass Rhizosphere	YWDKKYGLWRVAEDDPDSDLYAESSDADTVIRYIMAHA*
Ga0070766_112242461	3300005921	Soil	SCFLADHPRWSAWWDKKHGLWRVAEDDPDSDLYAESSDADTVMGYITAHA*
Ga0070717_120442072	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	WSAFWDKRDGVWRVAEDDPDSDLYAECRDADTVIGYITAHL*
Ga0079219_100348137	3300006954	Agricultural Soil	FLTDQPRWSIYWDKKYGLWRVAEDDPDSDLYAESNDADTVIGYVVTHA*
Ga0066709_1004771984	3300009137	Grasslands Soil	MAGRPRWSVFWDKAYGVWRASEDDPDSALYAESRDPDTVISYITAHA*
Ga0075423_127083033	3300009162	Populus Rhizosphere	EHLRWSIYWDKKYGLWRVAEDDSDSDLYAESSDADIVISYVVAHA*
Ga0105241_101633182	3300009174	Corn Rhizosphere	YWDKKYGLWRVAEDDPDSDLYAESSNADTVIGYIVAHA*
Ga0116214_10597095	3300009520	Peatlands Soil	LADQPRWSVYWDKKHGLWHRAEDDPDSDLYAESSDADAVIGYIAAHA*
Ga0116135_11939931	3300009665	Peatland	DHRSWSAWWDKHYGLWRVAEDDTDSDLYAESCDADVVIRYMQAHS*
Ga0116215_11172974	3300009672	Peatlands Soil	GWSASWDKKHGVWRVADDDPDSDLYAESADAATVIGYITAHR*
Ga0116216_102012971	3300009698	Peatlands Soil	RWSVYWDKRFGVWRVSEDDPDSELYAESSDADTVLAYITAHS*
Ga0116223_104982883	3300009839	Peatlands Soil	SCFLADQPRWSVYWDNKHGLWRVAEDDPDSDLYAESSDADAVIGYIAAHA*
Ga0126373_127130142	3300010048	Tropical Forest Soil	AFWDKRYGVWRVAEDDPDSALYAESADAAEVLRYMTVHS*
Ga0134063_103028222	3300010335	Grasslands Soil	VSCFLAEHPRWSAWWDKKYGLWRVAEDDPDSGLYLESSDADAVIGYIMAHA*
Ga0074044_105437812	3300010343	Bog Forest Soil	HQRWSVCWDKRHGVWRAAEDDPESDLYAESLDADTVISYIAAHS*
Ga0134126_117069433	3300010396	Terrestrial Soil	ADQLRWSVYWDKKYGLWRVAEDDPDSDLYAESSDADTVISYIVAHA*
Ga0126361_101788952	3300010876	Boreal Forest Soil	CFLADHPRWSAWWDKRYGLWRVAEDDPDSDLYAESSDADTVMGYITAHA*
Ga0126361_105485323	3300010876	Boreal Forest Soil	DHPGWSVFWDKAHGVWRVADDDPDSGLYAESSDADAVISYIQAHC*
Ga0126361_106768622	3300010876	Boreal Forest Soil	VFWDKAHGVWRVADDDPDSGLYAESSDAGTVIGYIQAHA*
Ga0126361_111016952	3300010876	Boreal Forest Soil	VFWDKRSSVWRVADDDPDSGLYAESSDADTVISYIQAHG*
Ga0137393_102409911	3300011271	Vadose Zone Soil	SLPEPPGLSAFLSKRHGVWLVTEDDPDSALYAESADATEVLGYMTAHS*
Ga0137364_106397621	3300012198	Vadose Zone Soil	MPRWSVCWDKKYGLWRVAEDDPDSDLYAESSDADAVIGYIMAHA*
Ga0137382_111542921	3300012200	Vadose Zone Soil	MQDRPRWSVFWDKRYGVWRAAEDDPDSALYTESCDADTVIGYITSHA*
Ga0137380_100351815	3300012206	Vadose Zone Soil	MSGSRIWSGAAYWDKKYGLWRVAEDDPDSDLYAESSDADTVISYISAHS*
Ga0137376_103068482	3300012208	Vadose Zone Soil	MQDRPRWSVFWDKRYGVWRAAEDDPDSALYTESCDADTVIGYITTHT*
Ga0137379_101942854	3300012209	Vadose Zone Soil	LAEHLRWSVWWDKKYGLWRVAEDDPDSDLYAEGSDADTVISYIMAHA*
Ga0137379_107555081	3300012209	Vadose Zone Soil	PRWSIYWDKNYGLWRVAEDDPDSDLYAESSDADTVIGYITEHA*
Ga0137360_118651342	3300012361	Vadose Zone Soil	SFLQEHLPWSAFWDKGRGVWRVAEDDPDSTLYTESRDVDTVIGYITEKS*
Ga0134044_10158282	3300012395	Grasslands Soil	DKRYGVWRVAEDDPDSDLYAESSQATIVITYIQAHSRDW*
Ga0157342_10183603	3300012507	Arabidopsis Rhizosphere	RWSIYWDKKYGLWRVAEDDPDSELYAESSDADTVIGYIVAHA*
Ga0157316_10205033	3300012510	Arabidopsis Rhizosphere	LAYQPRWSIYWDKKYGLWRAAEDDPDSDLYAESSDADTVIGYIVAHA*
Ga0137373_110100112	3300012532	Vadose Zone Soil	LAEHLRWSVWWDKKYGLWRVAEDDPDSDLYAEGSDADTVIRYIMAHA*
Ga0157375_118031971	3300013308	Miscanthus Rhizosphere	LADQPRWSIYWDKKYGLWRVAEDDPDSDLYAESSDADTVIGYIVAHA*
Ga0181522_107102882	3300014657	Bog	AGHLGWSAFWDKGSGVWRVAEDDPDSGLHAESSDAATVISYIQAHA*
Ga0132257_1010065951	3300015373	Arabidopsis Rhizosphere	DQLRWSVYWDKKYGLRRVAEDDPDSDLYAESSDADTVIGYIVAHA*
Ga0187807_10587022	3300017926	Freshwater Sediment	LRWSAYWDKKYGLWRVAEDDPDSDLYAESSDADAVIGYIVAHA
Ga0187808_102767852	3300017942	Freshwater Sediment	WWSAFWDKEYGVWRVAEDDPDSALYAESADAAEVLSYMTAHT
Ga0187817_109478471	3300017955	Freshwater Sediment	SAFRDKRHGVWRVAEDDPDSALYAESADAAEVLSYMTAHS
Ga0187783_101889202	3300017970	Tropical Peatland	VFLSEYSCWSVFWDKKYAVWRAAEDDPCSVLYAEAADVDAVISFITAHT
Ga0187851_108235561	3300018046	Peatland	WSAWWDKHYGLWRVAEDDTDSDLYAESCDADVVIRYMRAHS
Ga0187772_114589781	3300018085	Tropical Peatland	VAQLTSFLQQHPWWSAFWDKRYAVWRVAEDDPDSALYAESADAAEILS
Ga0210407_105121502	3300020579	Soil	HDHPRWSVFWDKRYGLWRAAEDDPDSDLYAEAANADAVIQYMTAHS
Ga0210395_105382161	3300020582	Soil	FLQQHPWWSAFWDKKYAVWRVAEDDPDSALYAESADAAEVVRYMAAHS
Ga0210397_106631231	3300021403	Soil	SIFWDKRYGLWRAAEDDPDSDLYAEAGNADTVIQYMTAHS
Ga0210389_107687071	3300021404	Soil	ADHLRWSAYWDKKYGLWRVAEDDPDSDLYAESSNADAVISYIVAHG
Ga0210387_106906962	3300021405	Soil	GHWDKKYGLWRVAEDNPDSDLYAESSDADTVTGYITAHS
Ga0210383_100779445	3300021407	Soil	RPYHQLPRDHSRWSVFWDKRYGLWRAAEDDPDSDLYAEAGNADTVIQYMAAHS
Ga0210383_103093302	3300021407	Soil	VVHLVGQEHGLWRVAEDDPDSDLYAESSDADAVMGYITAHA
Ga0210383_104037482	3300021407	Soil	SAYWDKKYGLWRVAEDDPDSDLHAESSDADTVISYIAAHA
Ga0210383_104444362	3300021407	Soil	TFLEQHPWWSAFWDKQYSVWRVAEDDPDSNLYAESADATEVLSYMAAHP
Ga0210383_115078672	3300021407	Soil	WDQRYGVWRVAEDDPDSGLYAESSDADAVISYIQAHA
Ga0210391_109964052	3300021433	Soil	GRLIAFLQHHPRWSVFYDKRHRLWRAAEDDPDSDLYTEASDVDTVIGYITAHR
Ga0210390_101534545	3300021474	Soil	RWSVFWDKRYGLWRAAEDDPDSDLYAEAGNADTVIQYMTAHS
Ga0210390_114504182	3300021474	Soil	WDKTHAVWRAAEDDPDSGLYTESSDADTVISYIQAHG
Ga0187846_103443661	3300021476	Biofilm	TSFLQQHPWWSAFWDKEHGVWRVAEDDPDSALYAESADAAEVLRYMAAHS
Ga0210398_105475212	3300021477	Soil	LIAFLQHHPRWSVFYDKRHRLWRAAEDDPDSDLYTEASDVDTVIGYITAHR
Ga0210398_110497172	3300021477	Soil	WDKRHAVWRAAEDEPGSVLYAEGADVDAVISYITAHT
Ga0242666_12088401	3300022721	Soil	KKHGLWRVAEDDPDSDLYAESSDADTVMGYITAHARESA
Ga0247691_10577431	3300024222	Soil	DHPRWSVFWDKRYGLWRAAEDDPDSDLYAEAANADAVIQYMTAHS
Ga0224556_10952291	3300024295	Soil	RWSAYWDKKHGVWRVAEDDPDSDLYAESSDADTVIGYITAHT
Ga0207692_107100851	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AGASRLAAFLRRHPGWSAFWDKQYGVWRAAEDDPLSAWYTETPEPAAVISYITAHT
Ga0207684_104484931	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAGRPRWSVFWDKAYGVWRAAEDDPDSVLYTESRDADTVIGYIATHS
Ga0207663_114733672	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SFLHDHPHWSVFWDKRDGLWRVAEDDPDSDLYAEAANADTVIDYMIAHS
Ga0207700_101041295	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	CFLADQKYGLWRVAEDDPDSDLYAESSDADTVIGYIVAHA
Ga0207700_108704353	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	FLRCHPGWSAFWDKAYGVWRAAEDDPCSDLYTETPDPTAVIRYITACS
Ga0207700_109857882	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LHPGWSAFWDKAYGVWRAAEDDPCSDLYTETPDPTAVIRYITA
Ga0207664_103901303	3300025929	Agricultural Soil	LHPGWSAFWDKAYGVWRAAEDDPCSDLYTETPDPTAVIRYITACS
Ga0207667_115980782	3300025949	Corn Rhizosphere	WDKKYGLWRVAEDDPDSDLYAESSDADTVIRYIMAHC
Ga0207702_108554683	3300026078	Corn Rhizosphere	KKYGLWRVAEDDPDSDLYAESSDADTVIRYIMAHA
Ga0207702_115533531	3300026078	Corn Rhizosphere	QLTRWSIFWDKRYGVWRAAEDDPDSALYTEARDLDTVLGYITTHS
Ga0209801_10739513	3300026326	Soil	LADHPQWSACWDKRFGVWRVTEDDPDSDLYAESSAVDTVISYIMAHA
Ga0257160_10279651	3300026489	Soil	LTAFLRKHPWWSAFWDKRYGLWRVAEDDPDSELYAESADTDAVLGYMTTHS
Ga0208827_11276591	3300027641	Peatlands Soil	PRWSAFWDKRYGAWRVAEDDPDSCLYAESRDLDTVIGYITAHVRATSCPA
Ga0209038_100872941	3300027737	Bog Forest Soil	VFWDKRFGVWRVADDDPDSGLYAESSDADIVIGYIQAHA
Ga0209139_102422342	3300027795	Bog Forest Soil	WQVSCFLADHPRWSAWWDKKHGLWHVAEDDPDSDLYAESSDADTVMGYITAHARESA
Ga0209415_100764944	3300027905	Peatlands Soil	FLADHLGWSAYWDKKYGLWRVAEDDSDSDLYAESSDADAVISYIAAHA
Ga0209415_106491632	3300027905	Peatlands Soil	FVSEHLCWSVFWDKQAGLWRAAEDDPDSDLYVQSPDADVVIRYMVAHS
Ga0137415_107306131	3300028536	Vadose Zone Soil	DQPRWSIYWDKKYGLWRVAEDDPDSDLYAESSNADTVIGYIVAHA
Ga0302228_104006672	3300028808	Palsa	LLDHPRWSAFWDKRHGVWRVAEDDPDSDLYAKSSDADIVIGYIQAHA
Ga0302229_101836363	3300028879	Palsa	LRDHPDWSVFWDKAHGVWRVADDDPDSGLYAESSDADTVIGYIRAHA
Ga0311340_104751213	3300029943	Palsa	SVLHDDPRWSAFWDKRHGVWRVAEDDPDSDLYAESSDAGAVIGYIQAHA
Ga0311340_113839012	3300029943	Palsa	TCFLQDHLRWSAFWDKKHGVWRVAEDDPDSDLYAESSDADTVIGYISAHS
Ga0311339_110046042	3300029999	Palsa	HPRWSAFWDKAYGVWRVAEDDPDSSLYAESRDLDTVISYITAHS
Ga0311338_107827562	3300030007	Palsa	VWWDKKHGLWRVAEDDPDSDLYAESSDADTVMSYITMHA
Ga0302181_103845171	3300030056	Palsa	WSAFWDKAHGVWRVAEDDPDSDLYAESSDAATVISYIKAHA
Ga0310037_100728131	3300030494	Peatlands Soil	WWDKKHGLWRVAEDDPDSELYAESSDAETVMGYITAHA
Ga0311372_123162323	3300030520	Palsa	LQGHPRWSAFWDKRHGVWRVAEDDPDSSLYAESSDLDTVISYITSHS
Ga0311355_108321632	3300030580	Palsa	DHPRWSAFWDKRHGVWRVAEDDPDSDLYAKSSDADIVIGYIQAHA
Ga0311356_100718055	3300030617	Palsa	KRHAVWRAAEDDPDSALYTESGDLDTVIGYILAHA
Ga0302180_105856452	3300031028	Palsa	PRWSAFWDKRHGVWRVAEDDPDSSLYAESSDLDTVISYITSHS
Ga0302307_106316881	3300031233	Palsa	IIRFLQDHERWSVYWDKKHGVWRVAEDDPDSDLYAESSDADTVISYMTAHG
Ga0302325_106661853	3300031234	Palsa	SAFWDKAHGVWRVAEDDPDSDLYAESSDAATVISYIKAHA
Ga0302325_122466051	3300031234	Palsa	GHPRWSAFWDKAYGVWRVAEDDPDSSLYAESRDVDTVISYITSHS
Ga0302325_129138951	3300031234	Palsa	FLQDHLPWSACWDKRRGVWRVAEDDPDSDLYAESRDAETVIRYIAANS
Ga0302324_1006210451	3300031236	Palsa	RWSAFWDKAYGVWRVAEDDPDSDLYAESSDAGTVISYIQAHA
Ga0302324_1010862981	3300031236	Palsa	FLQHHLNWSACWDKRHGVWRVAEDDPDSDLYAESQDADTVITYIAAHS
Ga0302326_103260741	3300031525	Palsa	LSWSMFWDKRYGVWRAAEDDPDSDLYAENSDIDVVIQYMVAHSSIQGPP
Ga0318573_104123222	3300031564	Soil	LQQHPGWSAFWDKRYGVWRVAEDDPDSALYAESADAAEVLSYMTAHS
Ga0310686_1123172601	3300031708	Soil	DKAHEVWRVADDDPDSGLYAESSDADTVISYIQAHG
Ga0307469_103712732	3300031720	Hardwood Forest Soil	KKYGLWRVAEDDPDSDLYAESSDADTVISYITAHT
Ga0318548_105174041	3300031793	Soil	KRYAVWRVAEDDPDSALYAESADAAEVLSYMTAHS
Ga0318551_105734852	3300031896	Soil	LQQHPWWSAFWDKRYAVWRVAEDDPDSALYAESADAAEVLSYMTAHS
Ga0310916_110491361	3300031942	Soil	SAFWDKRYAVWRVAEDDPDSALYAESADAAEVLSYMTAHS
Ga0318504_105415481	3300032063	Soil	HPGWSAFWDKRYGVWRVAEDDPDSALYAESADAAEVLSYMTAHS
Ga0318553_106784471	3300032068	Soil	WSAFWDKRYGVWRVAEDDPDSALYAESADAAEVLSYMTAHS
Ga0348332_128449562	3300032515	Plant Litter	WQVSCFLADHPRWSAWWDKKHGLWRVAEDDPDSDLYAESSDADTVMGYITAHARESA
Ga0335085_102615213	3300032770	Soil	VLAGQPRWSAFWDKRDGVWRVAEDDPDSDLYAASSDASTVIAYIQAHS
Ga0335085_114771682	3300032770	Soil	VFWDKKYGVWRAAEDDPGSALYAESREADTVIGYITAHS
Ga0335085_115810791	3300032770	Soil	HPRWSVFWDKRYRLWRAAEDDPDSALYTESPDLDTVIGYITAHT
Ga0335079_101566353	3300032783	Soil	VFWDKRYGVWRAAEDDPGSAAYAESPDLDAVIGYIISRA
Ga0335079_118309861	3300032783	Soil	DKRHGVWRVTEDDPDSALYAESADATEVLGYMTAHS
Ga0335078_105012904	3300032805	Soil	KRFGVWRVAEDDPDSDLYAESSDADTVIAYITANS
Ga0335078_119895442	3300032805	Soil	LQDHQRWSVFWDKRHGLWRAAEDDPDSALYTASRDVDTVIGYIISHP
Ga0335081_121250031	3300032892	Soil	ARTGRSKRDGPWRVAEDNPDSDLYAEAANADTVIDYMIAHS
Ga0335069_111783382	3300032893	Soil	RDQPRWSVYWNKKPGLWRVAEDDPGSDLYAEIRDADAVIGYIMAHP
Ga0335074_103461761	3300032895	Soil	SWSAYWDKRHAVWRVAEDDPGSDLYAESSDAATVIAYIQAHA
Ga0335074_110259821	3300032895	Soil	HPQWSACWDKKRGLWHVAEDDPDSDLCAESPDADTVIGYIAAHA
Ga0335077_102822524	3300033158	Soil	VFWDKHLGVWRAAEDDPDSGLYTECSDADTVIGYIRAHG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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