Metagenome / Metatranscriptome Family F059542

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059542
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	56 residues
Representative Sequence	MIRMPTLEQAREEARLLSARGLTVYVYRMGDGGYWLDQLPPRLVKLEFIEKVETE
Number of Associated Samples	77
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.21 %
% of genes near scaffold ends (potentially truncated)	41.35 %
% of genes from short scaffolds (< 2000 bps)	79.70 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.158 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.383 % of family members)
Environment Ontology (ENVO)	Unclassified (84.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.383 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.66% β-sheet: 20.48% Coil/Unstructured: 63.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.264.1.1: PriA-like	d1zt2a1	1zt2	0.70394
d.89.1.1: The origin DNA-binding domain of SV40 T-antigen	d4nbpa_	4nbp	0.69703
d.264.1.1: PriA-like	d1v33a_	1v33	0.67038
d.3.1.22: Autophagin-like	d2z0da1	2z0d	0.6423
d.218.1.12: Iojap/YbeB-like	d6sj5a_	6sj5	0.63788

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF13730	HTH_36	15.04
PF00805	Pentapeptide	2.26
PF00872	Transposase_mut	1.50
PF00188	CAP	0.75
PF00239	Resolvase	0.75
PF13565	HTH_32	0.75
PF00296	Bac_luciferase	0.75
PF13181	TPR_8	0.75
PF05147	LANC_like	0.75
PF00589	Phage_integrase	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	2.26
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.50
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.75
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.75
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.75
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.75
COG4403	Lantibiotic modifying enzyme	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
All Organisms	root	All Organisms	36.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
cellular organisms	root	All Organisms → cellular organisms	36.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	3.01 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10024289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2450	Open in IMG/M
3300005332\|Ga0066388_102044469	Not Available	1029	Open in IMG/M
3300005363\|Ga0008090_15627352	All Organisms → cellular organisms → Bacteria → Proteobacteria	906	Open in IMG/M
3300005363\|Ga0008090_15701659	Not Available	559	Open in IMG/M
3300005764\|Ga0066903_100896181	Not Available	1604	Open in IMG/M
3300010048\|Ga0126373_10578473	Not Available	1174	Open in IMG/M
3300010048\|Ga0126373_10961213	Not Available	919	Open in IMG/M
3300010048\|Ga0126373_12092722	Not Available	628	Open in IMG/M
3300010359\|Ga0126376_12839506	Not Available	534	Open in IMG/M
3300010361\|Ga0126378_10166738	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300010361\|Ga0126378_10417744	All Organisms → cellular organisms → Bacteria → Proteobacteria	1454	Open in IMG/M
3300010366\|Ga0126379_12044093	Not Available	675	Open in IMG/M
3300010376\|Ga0126381_101029360	Not Available	1188	Open in IMG/M
3300016270\|Ga0182036_10519603	Not Available	945	Open in IMG/M
3300016270\|Ga0182036_10975504	Not Available	697	Open in IMG/M
3300016341\|Ga0182035_10180758	Not Available	1650	Open in IMG/M
3300016357\|Ga0182032_10118608	Not Available	1904	Open in IMG/M
3300016357\|Ga0182032_10843893	Not Available	776	Open in IMG/M
3300016357\|Ga0182032_11451193	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300016404\|Ga0182037_10213974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1504	Open in IMG/M
3300016404\|Ga0182037_11647034	Not Available	571	Open in IMG/M
3300016422\|Ga0182039_10911306	Not Available	785	Open in IMG/M
3300016445\|Ga0182038_10106773	All Organisms → cellular organisms → Bacteria	2048	Open in IMG/M
3300016445\|Ga0182038_11021960	Not Available	732	Open in IMG/M
3300021372\|Ga0213877_10232767	Not Available	607	Open in IMG/M
3300021560\|Ga0126371_10124587	Not Available	2607	Open in IMG/M
3300021560\|Ga0126371_10350100	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300021560\|Ga0126371_11444121	Not Available	818	Open in IMG/M
3300021560\|Ga0126371_11682397	Not Available	759	Open in IMG/M
3300021560\|Ga0126371_12302650	Not Available	651	Open in IMG/M
3300021560\|Ga0126371_12917871	Not Available	579	Open in IMG/M
3300027874\|Ga0209465_10023087	All Organisms → cellular organisms → Bacteria → Proteobacteria	2880	Open in IMG/M
3300031543\|Ga0318516_10002212	All Organisms → cellular organisms → Bacteria → Proteobacteria	7972	Open in IMG/M
3300031543\|Ga0318516_10003225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6977	Open in IMG/M
3300031543\|Ga0318516_10062826	All Organisms → cellular organisms → Bacteria → Proteobacteria	2046	Open in IMG/M
3300031543\|Ga0318516_10102596	Not Available	1617	Open in IMG/M
3300031545\|Ga0318541_10090058	Not Available	1634	Open in IMG/M
3300031545\|Ga0318541_10100537	Not Available	1552	Open in IMG/M
3300031545\|Ga0318541_10227772	All Organisms → cellular organisms → Bacteria → Proteobacteria	1034	Open in IMG/M
3300031545\|Ga0318541_10652968	Not Available	588	Open in IMG/M
3300031546\|Ga0318538_10497991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300031549\|Ga0318571_10006797	All Organisms → cellular organisms → Bacteria	2515	Open in IMG/M
3300031549\|Ga0318571_10408194	Not Available	531	Open in IMG/M
3300031561\|Ga0318528_10487979	Not Available	662	Open in IMG/M
3300031572\|Ga0318515_10454633	Not Available	685	Open in IMG/M
3300031573\|Ga0310915_10955390	Not Available	599	Open in IMG/M
3300031573\|Ga0310915_11021844	Not Available	576	Open in IMG/M
3300031573\|Ga0310915_11084784	Not Available	557	Open in IMG/M
3300031640\|Ga0318555_10083388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1667	Open in IMG/M
3300031668\|Ga0318542_10682222	Not Available	537	Open in IMG/M
3300031679\|Ga0318561_10849131	Not Available	502	Open in IMG/M
3300031680\|Ga0318574_10785755	Not Available	558	Open in IMG/M
3300031680\|Ga0318574_10865532	Not Available	529	Open in IMG/M
3300031681\|Ga0318572_10015586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3713	Open in IMG/M
3300031719\|Ga0306917_10000117	All Organisms → cellular organisms → Bacteria	27156	Open in IMG/M
3300031719\|Ga0306917_11070668	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031736\|Ga0318501_10290380	Not Available	871	Open in IMG/M
3300031744\|Ga0306918_10845051	Not Available	714	Open in IMG/M
3300031747\|Ga0318502_10054015	All Organisms → cellular organisms → Bacteria → Proteobacteria	2121	Open in IMG/M
3300031747\|Ga0318502_10379811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300031751\|Ga0318494_10407634	Not Available	789	Open in IMG/M
3300031751\|Ga0318494_10607727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300031763\|Ga0318537_10349044	Not Available	546	Open in IMG/M
3300031768\|Ga0318509_10449771	Not Available	720	Open in IMG/M
3300031771\|Ga0318546_10277650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1156	Open in IMG/M
3300031777\|Ga0318543_10422711	Not Available	597	Open in IMG/M
3300031780\|Ga0318508_1007337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2381	Open in IMG/M
3300031782\|Ga0318552_10370128	Not Available	730	Open in IMG/M
3300031792\|Ga0318529_10034483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2116	Open in IMG/M
3300031793\|Ga0318548_10043936	Not Available	2017	Open in IMG/M
3300031798\|Ga0318523_10001679	All Organisms → cellular organisms → Bacteria → Proteobacteria	7385	Open in IMG/M
3300031821\|Ga0318567_10321130	Not Available	874	Open in IMG/M
3300031845\|Ga0318511_10460101	Not Available	586	Open in IMG/M
3300031846\|Ga0318512_10221022	Not Available	930	Open in IMG/M
3300031846\|Ga0318512_10464748	Not Available	640	Open in IMG/M
3300031860\|Ga0318495_10396423	Not Available	608	Open in IMG/M
3300031879\|Ga0306919_10038023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3098	Open in IMG/M
3300031879\|Ga0306919_10054257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2668	Open in IMG/M
3300031879\|Ga0306919_10275745	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300031879\|Ga0306919_10601377	Not Available	848	Open in IMG/M
3300031879\|Ga0306919_10812315	Not Available	718	Open in IMG/M
3300031879\|Ga0306919_10852250	Not Available	699	Open in IMG/M
3300031880\|Ga0318544_10245366	Not Available	693	Open in IMG/M
3300031890\|Ga0306925_11959516	Not Available	554	Open in IMG/M
3300031893\|Ga0318536_10069817	Not Available	1726	Open in IMG/M
3300031894\|Ga0318522_10207086	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300031896\|Ga0318551_10777657	Not Available	556	Open in IMG/M
3300031897\|Ga0318520_10022490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	3032	Open in IMG/M
3300031897\|Ga0318520_10081157	All Organisms → cellular organisms → Bacteria → Proteobacteria	1782	Open in IMG/M
3300031897\|Ga0318520_10792817	Not Available	594	Open in IMG/M
3300031910\|Ga0306923_10160513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2567	Open in IMG/M
3300031910\|Ga0306923_10456519	All Organisms → cellular organisms → Bacteria → Proteobacteria	1449	Open in IMG/M
3300031910\|Ga0306923_11035686	Not Available	889	Open in IMG/M
3300031912\|Ga0306921_10863164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1030	Open in IMG/M
3300031912\|Ga0306921_11050273	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300031912\|Ga0306921_12015886	Not Available	614	Open in IMG/M
3300031941\|Ga0310912_10007938	All Organisms → cellular organisms → Bacteria → Proteobacteria	6568	Open in IMG/M
3300031941\|Ga0310912_11252036	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031942\|Ga0310916_10424868	Not Available	1131	Open in IMG/M
3300031946\|Ga0310910_11430859	Not Available	531	Open in IMG/M
3300031954\|Ga0306926_10315356	Not Available	1935	Open in IMG/M
3300031954\|Ga0306926_11878020	Not Available	677	Open in IMG/M
3300031954\|Ga0306926_11962488	Not Available	659	Open in IMG/M
3300031959\|Ga0318530_10032920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1869	Open in IMG/M
3300031959\|Ga0318530_10209176	Not Available	801	Open in IMG/M
3300031959\|Ga0318530_10504783	Not Available	503	Open in IMG/M
3300032001\|Ga0306922_10238731	Not Available	1953	Open in IMG/M
3300032001\|Ga0306922_11128052	Not Available	802	Open in IMG/M
3300032001\|Ga0306922_11212886	Not Available	767	Open in IMG/M
3300032001\|Ga0306922_11266989	Not Available	747	Open in IMG/M
3300032010\|Ga0318569_10093097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1355	Open in IMG/M
3300032025\|Ga0318507_10019505	Not Available	2391	Open in IMG/M
3300032035\|Ga0310911_10142967	Not Available	1342	Open in IMG/M
3300032041\|Ga0318549_10018214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2612	Open in IMG/M
3300032041\|Ga0318549_10142724	Not Available	1063	Open in IMG/M
3300032042\|Ga0318545_10051253	All Organisms → cellular organisms → Bacteria → Proteobacteria	1397	Open in IMG/M
3300032055\|Ga0318575_10276125	Not Available	849	Open in IMG/M
3300032059\|Ga0318533_10123768	All Organisms → cellular organisms → Bacteria → Proteobacteria	1811	Open in IMG/M
3300032059\|Ga0318533_10970368	Not Available	623	Open in IMG/M
3300032064\|Ga0318510_10283941	Not Available	687	Open in IMG/M
3300032065\|Ga0318513_10307983	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300032066\|Ga0318514_10059214	All Organisms → cellular organisms → Bacteria → Proteobacteria	1870	Open in IMG/M
3300032066\|Ga0318514_10093374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1517	Open in IMG/M
3300032067\|Ga0318524_10031951	Not Available	2433	Open in IMG/M
3300032094\|Ga0318540_10375474	Not Available	687	Open in IMG/M
3300032261\|Ga0306920_100237317	All Organisms → cellular organisms → Bacteria → Proteobacteria	2720	Open in IMG/M
3300032261\|Ga0306920_100708208	Not Available	1483	Open in IMG/M
3300032261\|Ga0306920_100854450	All Organisms → cellular organisms → Bacteria → Proteobacteria	1333	Open in IMG/M
3300032261\|Ga0306920_101372439	Not Available	1014	Open in IMG/M
3300032261\|Ga0306920_102414126	Not Available	725	Open in IMG/M
3300032261\|Ga0306920_103894225	Not Available	544	Open in IMG/M
3300033289\|Ga0310914_10000874	All Organisms → cellular organisms → Bacteria → Proteobacteria	18744	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.99%
Loam	Environmental → Terrestrial → Soil → Loam	3.01%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	84.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.01%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.01%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.50%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_100242891	3300004633	Tropical Forest Soil	MIRMPTLEQAREEARLLSARGYTVYVYRMRDGGYWLDQLPPRLVKLEFIEKIETE*
Ga0066388_1020444691	3300005332	Tropical Forest Soil	MIRMPTLEQAREEARLLSARGYTVYVYRMRDGYWLDQLPPRLVKLEFIEKIETE*
Ga0008090_156273521	3300005363	Tropical Rainforest Soil	MIYMPTLEQAREEARLLSARGLTVYIYRINDGGYWLDQLPPRRVKLELIEKVEAE*
Ga0008090_157016591	3300005363	Tropical Rainforest Soil	MIRMPTLEQAREEARRLSTRGLTLYVYRMGDGGYWLDRQPPRLIKLEFIEKIETD*
Ga0066903_1008961813	3300005764	Tropical Forest Soil	MIYMPTLEQAREEARILSSRGLIVYVYRMSDGGYWLDQLPPRLVKLEFIEKVETE*
Ga0126373_105784731	3300010048	Tropical Forest Soil	MIRMPTLEQAREEARILSSRGLTVYVYRMSDGGYWLDQLPPRLVKLEFIQKVETE*
Ga0126373_109612132	3300010048	Tropical Forest Soil	MIRTPTLEQAREEARLLTARGLTIYVYRMSDGSYWLDTTPPRLVKLEFVEVSEPPKSAT*
Ga0126373_120927221	3300010048	Tropical Forest Soil	MIRMPTLEEAREEAGRFAEKGLTIHVYRMLDGSYWLDQLPPRLIKLEFVETVKRSP*
Ga0126376_128395061	3300010359	Tropical Forest Soil	AREEARLLSARGYTVYVYRMRDGYWLDQLPPRLVKLEFIEKIETE*
Ga0126378_101667384	3300010361	Tropical Forest Soil	MIRMPTLEQAREEARMLSSRGLTVYIYRMSDGGYWLDQLPPRLVKLEFIEKVETE*
Ga0126378_104177443	3300010361	Tropical Forest Soil	MIRMPTLEQAREEARLLSARGYTVYVYRMRDGDYWLDQLPPRLVKLEFIEKIETE*
Ga0126379_120440931	3300010366	Tropical Forest Soil	MIRMPTLERAREDARLLSAQGYTVYIYRMRDGGYWLDQLPPRLVKLEFIEKIETPSTP*
Ga0126381_1010293602	3300010376	Tropical Forest Soil	MIRMPTLEQAREEARMLSSRGLIVYVYRMSDGGYWLDQLPPRLVKLEFIEKVETE*
Ga0182036_105196031	3300016270	Soil	MIRMPTLVQAREEARMLSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSPSGASSR
Ga0182036_109755042	3300016270	Soil	MIRTPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTTPPRPVKLEFVEKAGPLLGGVF
Ga0182035_101807582	3300016341	Soil	REEARILSARGLTVYIYRMRDSGYWLDQQPPRLVKLEFIEKVEME
Ga0182032_101186081	3300016357	Soil	MIRMPTLEQAREEARLLSARGYTVYVYRMRDGGYWLDQLPPRLVKLEFIEKIET
Ga0182032_108438932	3300016357	Soil	TSMIRTPTLEQAREEARLLTARGLTIYVYRMSDGAYWLDTPPPRLVKLEFVEVSEPPKSA
Ga0182032_114511932	3300016357	Soil	MIRMPTLEQAREEARMLSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSPSGASPR
Ga0182037_102139743	3300016404	Soil	MIYMPTPEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRLVKL
Ga0182037_116470342	3300016404	Soil	MIYMPTLEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRLVKLEFIEK
Ga0182039_109113061	3300016422	Soil	ARLSAPLLTAPGLTVSLYRMGDGGYWLDTAPPRLVKLEFVEVSKPPKSAA
Ga0182038_101067731	3300016445	Soil	EQAREEARLLTTRGLTVYVYRMGDGGYWVDQQPTRMVKLEFIEKVGPLTGISVS
Ga0182038_110219601	3300016445	Soil	MIRMPTLEEAREEAGRFAEKGLTIHVYRMLDGSYWLDQLPPRLIKLEFVETVKRS
Ga0213877_102327671	3300021372	Bulk Soil	MIRMPTLEQAREEARMLSSRGLIVYVYRMSDGGYWLDQLPPRLVKLEFIEKVETE
Ga0126371_101245875	3300021560	Tropical Forest Soil	MIRMPTLEQAREEARLLSARGYTVYVYRMRDGYWLDQLPPRLVKLEFIEKIETE
Ga0126371_103501004	3300021560	Tropical Forest Soil	MIRTPTLEQAREEARLLTARGLTIYVYRMSDGSYWLDTTPPRLVKLEFVEVSEPPKSAT
Ga0126371_114441211	3300021560	Tropical Forest Soil	MIRMPTLEQAREEARLLSARGYTVYVYRMRDGDYWLDQLPPRLVKLEFIEKIETE
Ga0126371_116823972	3300021560	Tropical Forest Soil	MIRMPTLEEAREEAGRFAEKGLTIHVYRMLDGSYWLDQLPPRLIKLEFVETVKRSP
Ga0126371_123026501	3300021560	Tropical Forest Soil	MIRMPTLEQAREDAHIYRMRDGGYWLDQLPPRLVKLEFIEKIETPSTP
Ga0126371_129178711	3300021560	Tropical Forest Soil	MIRMPTLEQARKEACLLSARGYTVYVYRMRDGGYWLDQLPPRLVKLEFIEKIETE
Ga0209465_100230872	3300027874	Tropical Forest Soil	MIRMPTLEQAREEARLLSARGYTVYVYRMRDGGYWLDQLPPRLVKLEFIEKIETE
Ga0318516_100022122	3300031543	Soil	MIRMPTLEQAREEARLLSARGLTVYVYRMGDGGYWLDQLPPRLVKLEFIEKVETE
Ga0318516_100032254	3300031543	Soil	MIRVPTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLVKLEFVEVSEPPKSGA
Ga0318516_100628261	3300031543	Soil	MPTLEQAREEARLLSARGLTVYVYRMGDGGYWLDQLPPRLVKLEFIEKVETE
Ga0318516_101025962	3300031543	Soil	MIRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTAPSRLVKLEFVEKVGPLSSLGGGF
Ga0318541_100900582	3300031545	Soil	MIRMPTLEQAREEARMLSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFIEKVGTE
Ga0318541_101005373	3300031545	Soil	MIYMPTLEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRLVKLEFIEKVEME
Ga0318541_102277722	3300031545	Soil	MIYMPTLEQAREEARILSAQGLTVYVYQMRDGGYWIDQLPPRRVKLEFIEKIEAE
Ga0318541_106529682	3300031545	Soil	MIRMPTLEQAREEARHLSARGLTVYVYRMSDGGYWLDQLPPRLVKLEFIEKIETE
Ga0318538_104979911	3300031546	Soil	MSRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDQQPPWLVKLEFIEKVDPLAPLAA
Ga0318571_100067974	3300031549	Soil	MPTLERAREEARLLSARGLTVYVYRMGDGGYWLDQLPPRLVKLEFLEKVSPPR
Ga0318571_104081941	3300031549	Soil	MIRTPTLEQAREEARLLTARGLTVYVYRMDDGGYWLDTAPPRLVKLEFVEVSKPPKSDAVDDP
Ga0318528_104879791	3300031561	Soil	TLEQAREEARLLTARGLTIYVYRMSDGAYWLDTPPPRLVKLEFVEVSEPPKSAA
Ga0318515_104546331	3300031572	Soil	MIRMPTLEQAREEARLLSARGYTVYVYRMRHGGYWLDQLPPRLVKLEFIEKIETE
Ga0310915_109553901	3300031573	Soil	MIRMPTLEQAREEARLLNARGLTVYVYRMGDGGYWLDQLPPRLVKLD
Ga0310915_110218442	3300031573	Soil	EAREEAGRFAEKGLTIHVYRMLDGSYWLDQLPPRLIKLEFVETVKRSP
Ga0310915_110847842	3300031573	Soil	IYMPTLEQAREEARILSAQGLTVYVYQMRDGGYWIDQLPPRRVKLEFIEKIEAE
Ga0318555_100833882	3300031640	Soil	MIRMPTPVQAREEARMVSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSPSGASPR
Ga0318542_106822221	3300031668	Soil	MIRMPTLVQAREEARMLSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSPSGASP
Ga0318561_108491311	3300031679	Soil	MIRMPTLVQAREEARMLSSRGLIVYVYRISDGSYLLDQLPPRLVKLEFLEKVSPSGASSR
Ga0318574_107857551	3300031680	Soil	MIRMPTLEEAREEAGRFAEKGLTIHVYRMLDGSYWLDQLPPRLIKLEFVETVK
Ga0318574_108655321	3300031680	Soil	LEQAREEARLLSARGLTVYVYRMGDGGYWLDQLPPRLVKLEFIEKVETE
Ga0318572_100155861	3300031681	Soil	LEQAREEARLLTARGLTVYVYRMSDGGYWLDTTPPRLVKLEFVEVSEPPKSGA
Ga0306917_1000011735	3300031719	Soil	LIRMPTLERAREEARLLSARGLTVYVYRMGDGGYWLDQLPPRLVKLEFLEKVSPPR
Ga0306917_110706681	3300031719	Soil	VHTPLGFEVEEVLEQAREEARLLAARGLTVYVYRMGDGYWLDQLPPRLVKLEFIEKVETE
Ga0318501_102903801	3300031736	Soil	MIRMPTLEQARQEARLLTARGLTVYVYRMGDGGYWLDQQPPWLVKLEFIEKVDPLAPLAA
Ga0306918_105012762	3300031744	Soil	RGYTVYVYRMRHGGYWLDQLPPRLVKLEFIEKIETE
Ga0306918_108450511	3300031744	Soil	MIRTPTLEQAREEARLLTARGLTVYVYRMRDSGYWLDTTPPRLVKLEF
Ga0318502_100540151	3300031747	Soil	MIRVPTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLVKLEFVEVSEPPKSAT
Ga0318502_103798113	3300031747	Soil	EEARILSSRGLTVYVYRMSDGGYWLDQLPPRLVKLEFIEKVETE
Ga0318494_104076341	3300031751	Soil	VQAREEARMVSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSPSGASPR
Ga0318494_106077271	3300031751	Soil	MPTLEQAREEARLLTTRGLTVYVYRMGDGGYWVDQQPTRIVKLEFIEKVGPLTGISVS
Ga0318537_103490441	3300031763	Soil	MPTLEQAREEARLLTTRGLTVYVYRMGDGGYWVDQQPTRIVKLEFIEKVG
Ga0318509_104497711	3300031768	Soil	MIYMPTLEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRRVKLEFIEKVETE
Ga0318546_102776501	3300031771	Soil	MIRTPTLEQAREEARLLTARGLTVYVYRMDDGGYWLDTAPPRLVKLEFVEVSKPPKSD
Ga0318543_104227112	3300031777	Soil	MIYMPTLEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRRVKLEFIEKVEA
Ga0318508_10073373	3300031780	Soil	MIRTPTLEQAREEARLLTARGLTVYVYRMSDGGYWLDTTPPRLVKLEFVEVSEPPKSGA
Ga0318552_103701281	3300031782	Soil	PTLEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRLVKLEFIEKVEME
Ga0318529_100344832	3300031792	Soil	MIRVPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTTPPRLIKLEFVEVSEPPKSGA
Ga0318548_100439361	3300031793	Soil	MIRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTTPPRLVKLEFIEKVGPLSSFGGDF
Ga0318523_100016795	3300031798	Soil	MIRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTAPLRLVKLEFVEKVGPLSSLGGGF
Ga0318567_103211302	3300031821	Soil	MIRVPTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLVKLEFVEVSEPPKSVA
Ga0318511_104601011	3300031845	Soil	PELRRRLTGRLGAAISRLGSSELEATSMLRMPTLEQTREEARMLSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSPSGASPR
Ga0318512_102210222	3300031846	Soil	LEQAREEARLLTARGLTVYVYRMRDGGYWLDTTPPRLVKLEFVEVSEPPKSGA
Ga0318512_104647481	3300031846	Soil	SRLGSSELGATSMIRMPTLEQAREEARMLSSRGLIVYVYQMSDGSYWLDQLPPRLVKLEFLEKVSPSGASSR
Ga0318495_103964232	3300031860	Soil	EQAREEARLLSARGLTVYVYRMGDGGYWLDQLPPRLVKLEFIEKVETE
Ga0306919_100380234	3300031879	Soil	MIRTPTLEQAREEARLLTARGLTVYVYRMDDGGYWLDTAPPRLVKLEFVEVSKPPKSAA
Ga0306919_100542572	3300031879	Soil	MIRMPTLEQAREEARLLSARGLTVYVYRMSDGGYWLDQLPPRLVKLEFIEKIETE
Ga0306919_102757451	3300031879	Soil	MPTLEQAREEARLLTTRGLTVYVYRMGDGGYWVDQQPTRMVKLEFIEKVGPLTGISVS
Ga0306919_106013772	3300031879	Soil	MIYMPTLEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRRVKLEFIEKVEAE
Ga0306919_108123152	3300031879	Soil	MIRMPTLVQAREEARMLSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSPSGASPR
Ga0306919_108522504	3300031879	Soil	MIRMPTLEQAREEARLLNARGLTVYVYRMGDGGYWLDQLPPRLVKLDEFIEKVGPLATFR
Ga0318544_102453661	3300031880	Soil	TSMIRMPTPVQAREEARMVSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSPSGASPR
Ga0306925_119595161	3300031890	Soil	NSERPSMIYMPTLEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRLVKLEFIEKVEM
Ga0318536_100698171	3300031893	Soil	MIRMPTLEQAREEARMLSSRGLIVYVYRMSDGGYWLDQLPPRLVKLEFI
Ga0318522_102070862	3300031894	Soil	MIRVPTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLVKLEFVEVSEPPK
Ga0318551_107776571	3300031896	Soil	MIRMPTLVQAREEARMLSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSPSGAS
Ga0318520_100224905	3300031897	Soil	SMIRVPTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLVKLEFVEVSEPPKSGA
Ga0318520_100811574	3300031897	Soil	MIRVPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTTPPRLVKLEFFEVSEPPKSGA
Ga0318520_107928171	3300031897	Soil	MIRMATLEQAREEARLLSARGYTVYVYRMRDGGYWLDQLPPRLVKLEFIEKIETE
Ga0306923_101605136	3300031910	Soil	MIRMPTLEQAREEARILSSRGLTVYVYRMSDGGYWLDQLPPRLVKLEFIEKVETE
Ga0306923_104565193	3300031910	Soil	MIYMPTPEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRLVKLEFIE
Ga0306923_110356861	3300031910	Soil	VIYMPTLEQAPEEARILSGRGLTVYVYRMRDGGYWLDQLLPRLVKLEFIEKVETK
Ga0306921_108631642	3300031912	Soil	MIRMPTLVQAREEARMLSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSP
Ga0306921_110502733	3300031912	Soil	MIRMPTLEQAREEARHLSARGLTVYVYRMSDGGYWLDQLPPRLVKLEFIEQVETE
Ga0306921_120158861	3300031912	Soil	MIRTPTLEQAREEARLLTARGLTVYVYRMRDSGYWLDTTPPRLVKLEFVEVSE
Ga0310912_100079389	3300031941	Soil	MIRVPTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLVKLEFVEVSEPPNSGA
Ga0310912_112520361	3300031941	Soil	MIRMPTPVQAREEARMVSSRGLIVYVYRMSDGSYWLDQLPPRLVKLEFLEKVSP
Ga0310916_104248682	3300031942	Soil	MIRMPTLELAREEARHLSARGLTVYVYRMSDGGYWLDQLPPRLVKLEFIEKIETE
Ga0310910_114308591	3300031946	Soil	ARRSATVHTPLGFEVEEVLEQAREEARLLAARGLTVYVYRMGDGYWLDQLPPRLVKLEFIEKVETE
Ga0306926_103153565	3300031954	Soil	MIRMPTLEQAREEARLLNARGLTVYVYQMGDGGYWLDQLPPRLVKLDEFIEKVGPLATLRGDF
Ga0306926_118780201	3300031954	Soil	AISRRGSAELGATSMIRMPTLEQARQEARLLTARGLTVYVYRMGDGGYWLDHQPPWLVKLEFIEKVDPLAPLAA
Ga0306926_119624882	3300031954	Soil	MIRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTTPPRLVKLEFFEVSEPPKSGA
Ga0318530_100329201	3300031959	Soil	IRTPTLEQAREEARLLTARGLTVYVYRMDDGGYWLDTAPPRLVKLEFVEVSKPPKSAA
Ga0318530_102091761	3300031959	Soil	TSMSRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDQQPPWLVKLEFIEKVDPLAPLAA
Ga0318530_105047831	3300031959	Soil	LEEAREEAGRFAEKGLTIHVYRMLDGSYWLDQLPPRLIKLEFVETVKRSP
Ga0306922_102387312	3300032001	Soil	MIRMPTLEQAREEARLLNARGLTVYVYRMGDGGYWLDQLPPRLVKLDEFIEKVGPLATLRGDF
Ga0306922_111280522	3300032001	Soil	MIYMPTLEQAREEARILSARGLTVYVYQMRDGGYWIDQLPPRRVKLEFIEKIEAE
Ga0306922_112128861	3300032001	Soil	MIYMPTPEQAREEARILSARGLTVYIYRMRDSGYWLDQQPPRLVKLEFIEKVEME
Ga0306922_112669892	3300032001	Soil	MVRTPTLEQAREEARLLTARGLTIYVYRMSDGAYWLDTPPPRLVKLEFVEVSEPPKSAA
Ga0318569_100930971	3300032010	Soil	MPTLEQAREEARHLSARGLTVYVYRMSDGGYWLDQLPPRLVKLEFIEKIETE
Ga0318507_100195057	3300032025	Soil	TSMIRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTAPSRLVKLEFVEKVGPLSSLGGGF
Ga0310911_101429673	3300032035	Soil	MIRIPTLEQAREEARLLSARGLTVYVYRMSDGGYWLDQLPPRLVKLEFIEKIETE
Ga0318549_100182144	3300032041	Soil	PTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLVKLEFVEVSEPPKSGA
Ga0318549_101427242	3300032041	Soil	MIRTPTLEQAREEARLLTARGLTIYIYRMGDGGYWLDTTPPRLVKLEFVEASEPPKSAA
Ga0318545_100512533	3300032042	Soil	MPTLEQAREEARLLSARGLTVYVYRMGDGGYWLDQLPPRLVKLEFI
Ga0318575_102761251	3300032055	Soil	IRVPTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLVKLEFVEVSEPPKSGA
Ga0318533_101237684	3300032059	Soil	MIYMPTLEQAREEARILSAQGLTVYVYQMRDGGYWIDQLPPRRVKFEFIEKIEAE
Ga0318533_109703682	3300032059	Soil	MSRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDQQPPWLVKLEFIEKVDPLAPL
Ga0318510_102839412	3300032064	Soil	EEARMLSSRGLIVYVYRMSDGGYWLDQLPPRLVKLEFIEKVETE
Ga0318513_103079832	3300032065	Soil	MIRVPTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLIKLEFVEVSEPPKSAT
Ga0318514_100592144	3300032066	Soil	MPTLEQAREEARLLSARGLTVYVYRMGVGGYWLDQLPPRLVKLEFIVKVETE
Ga0318514_100933741	3300032066	Soil	RVPTLEQAREEARLLTARGLTIYVYRMGDGGYWLDTTPPRLVKLEFVEVSEPPKSGA
Ga0318524_100319511	3300032067	Soil	CEQASDADSDKAVRTSMIRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTAPSRLVKLEFVEKVGPLSSLGGGF
Ga0318540_103754741	3300032094	Soil	MIRTPTLEQAREEARLLTARGLTIYVYRMSDGAYWLDTPPPRLVKLEFVEVSEPPKSAA
Ga0306920_1002373172	3300032261	Soil	MIRTPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTTPPRLIKLEFVEVSEPPKSAT
Ga0306920_1007082082	3300032261	Soil	MIRTPTLEQAREEARLLTARGLTVYVYRMRDSGYWLDTTPPRLVKLEFVEVSEPPKSAA
Ga0306920_1008544502	3300032261	Soil	MIRMPTLEQAREEARLLTARGLTVYVYRMGDGGYWLDTTPPRLVKLEFVEKVGPLLGGVF
Ga0306920_1013724392	3300032261	Soil	RPTGISGIIRAEARILSARGLTVYIYRMRDGGYWLDQLPPRRVKLEFIEKVEAE
Ga0306920_1024141261	3300032261	Soil	MIRTPTLEQAREEARLLTARGFTIYVYRMRDGGYWLDTTPPRLVKLEFVEVSEPPKSAA
Ga0306920_1038942251	3300032261	Soil	MIRMPTLEQARQEARLLTARGLTVYVYRMGDGGYWLDHQPPWLVKLEFIEKVDPLAPLAA
Ga0310914_100008742	3300033289	Soil	MPTLEQAREEARLLSARGLTVYVYRMGDGGYWLDQLPPRLVKLDEFIEKVGPLATLRGDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059542

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences