Metagenome Family F059510

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F059510
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	47 residues
Representative Sequence	MAPKRGGGNAKKAATGASHDKEWVPSLMGEMELNEMVEAGVLPN
Number of Associated Samples	64
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.22 %
% of genes near scaffold ends (potentially truncated)	54.14 %
% of genes from short scaffolds (< 2000 bps)	86.47 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (90.226 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (95.489 % of family members)
Environment Ontology (ENVO)	Unclassified (95.489 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (95.489 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.28% β-sheet: 0.00% Coil/Unstructured: 59.72%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF04195	Transposase_28	8.27

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
All Organisms	root	All Organisms	9.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
cellular organisms	root	All Organisms → cellular organisms	9.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	9.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.23 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	8.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300013297\|Ga0157378_11631725	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	691	Open in IMG/M
3300014745\|Ga0157377_11657697	Not Available	514	Open in IMG/M
3300015267\|Ga0182122_1019676	Not Available	718	Open in IMG/M
3300015268\|Ga0182154_1005326	Not Available	1018	Open in IMG/M
3300015268\|Ga0182154_1061607	Not Available	530	Open in IMG/M
3300015269\|Ga0182113_1040871	Not Available	653	Open in IMG/M
3300015269\|Ga0182113_1052405	Not Available	608	Open in IMG/M
3300015274\|Ga0182188_1019990	Not Available	676	Open in IMG/M
3300015274\|Ga0182188_1060715	Not Available	506	Open in IMG/M
3300015275\|Ga0182172_1029660	Not Available	660	Open in IMG/M
3300015276\|Ga0182170_1025731	Not Available	688	Open in IMG/M
3300015276\|Ga0182170_1028301	Not Available	671	Open in IMG/M
3300015276\|Ga0182170_1076136	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	505	Open in IMG/M
3300015276\|Ga0182170_1076373	Not Available	504	Open in IMG/M
3300015277\|Ga0182128_1072592	Not Available	517	Open in IMG/M
3300015277\|Ga0182128_1072608	Not Available	517	Open in IMG/M
3300015279\|Ga0182174_1057613	Not Available	568	Open in IMG/M
3300015281\|Ga0182160_1067054	Not Available	538	Open in IMG/M
3300015283\|Ga0182156_1053351	Not Available	585	Open in IMG/M
3300015287\|Ga0182171_1040625	Not Available	632	Open in IMG/M
3300015289\|Ga0182138_1035161	Not Available	659	Open in IMG/M
3300015289\|Ga0182138_1042548	Not Available	625	Open in IMG/M
3300015291\|Ga0182125_1031217	Not Available	695	Open in IMG/M
3300015292\|Ga0182141_1024764	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	740	Open in IMG/M
3300015292\|Ga0182141_1049302	Not Available	609	Open in IMG/M
3300015294\|Ga0182126_1036584	Not Available	668	Open in IMG/M
3300015294\|Ga0182126_1040793	Not Available	648	Open in IMG/M
3300015294\|Ga0182126_1066641	Not Available	562	Open in IMG/M
3300015294\|Ga0182126_1093806	Not Available	506	Open in IMG/M
3300015296\|Ga0182157_1011910	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	938	Open in IMG/M
3300015298\|Ga0182106_1076251	Not Available	552	Open in IMG/M
3300015300\|Ga0182108_1089794	Not Available	531	Open in IMG/M
3300015302\|Ga0182143_1073987	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	560	Open in IMG/M
3300015303\|Ga0182123_1045369	Not Available	630	Open in IMG/M
3300015303\|Ga0182123_1080335	Not Available	535	Open in IMG/M
3300015303\|Ga0182123_1092248	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	513	Open in IMG/M
3300015307\|Ga0182144_1017275	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	862	Open in IMG/M
3300015307\|Ga0182144_1034439	Not Available	709	Open in IMG/M
3300015308\|Ga0182142_1014677	Not Available	921	Open in IMG/M
3300015308\|Ga0182142_1048375	Not Available	655	Open in IMG/M
3300015314\|Ga0182140_1025501	Not Available	788	Open in IMG/M
3300015314\|Ga0182140_1044357	Not Available	674	Open in IMG/M
3300015314\|Ga0182140_1055212	Not Available	633	Open in IMG/M
3300015321\|Ga0182127_1078435	Not Available	584	Open in IMG/M
3300015322\|Ga0182110_1051824	Not Available	660	Open in IMG/M
3300015341\|Ga0182187_1159497	Not Available	547	Open in IMG/M
3300015341\|Ga0182187_1166554	Not Available	538	Open in IMG/M
3300015342\|Ga0182109_1056165	Not Available	836	Open in IMG/M
3300015342\|Ga0182109_1157869	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	574	Open in IMG/M
3300015342\|Ga0182109_1223669	Not Available	502	Open in IMG/M
3300015343\|Ga0182155_1057954	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	815	Open in IMG/M
3300015343\|Ga0182155_1083635	Not Available	720	Open in IMG/M
3300015343\|Ga0182155_1145516	Not Available	592	Open in IMG/M
3300015343\|Ga0182155_1168333	Not Available	561	Open in IMG/M
3300015344\|Ga0182189_1073055	Not Available	767	Open in IMG/M
3300015344\|Ga0182189_1107620	Not Available	667	Open in IMG/M
3300015345\|Ga0182111_1170547	Not Available	579	Open in IMG/M
3300015346\|Ga0182139_1132852	Not Available	638	Open in IMG/M
3300015346\|Ga0182139_1168598	Not Available	583	Open in IMG/M
3300015346\|Ga0182139_1200805	Not Available	544	Open in IMG/M
3300015346\|Ga0182139_1215985	Not Available	528	Open in IMG/M
3300015346\|Ga0182139_1216568	Not Available	528	Open in IMG/M
3300015347\|Ga0182177_1020899	Not Available	1239	Open in IMG/M
3300015347\|Ga0182177_1147637	Not Available	615	Open in IMG/M
3300015351\|Ga0182161_1137739	Not Available	655	Open in IMG/M
3300015351\|Ga0182161_1162791	Not Available	614	Open in IMG/M
3300015351\|Ga0182161_1185318	Not Available	583	Open in IMG/M
3300015351\|Ga0182161_1226652	Not Available	537	Open in IMG/M
3300015355\|Ga0182159_1154159	Not Available	718	Open in IMG/M
3300015355\|Ga0182159_1186687	Not Available	662	Open in IMG/M
3300015355\|Ga0182159_1254580	Not Available	579	Open in IMG/M
3300015355\|Ga0182159_1282477	Not Available	553	Open in IMG/M
3300015355\|Ga0182159_1308729	Not Available	532	Open in IMG/M
3300015361\|Ga0182145_1066450	Not Available	720	Open in IMG/M
3300015361\|Ga0182145_1130066	Not Available	576	Open in IMG/M
3300017404\|Ga0182203_1139335	Not Available	531	Open in IMG/M
3300017407\|Ga0182220_1037419	Not Available	676	Open in IMG/M
3300017407\|Ga0182220_1095854	Not Available	521	Open in IMG/M
3300017409\|Ga0182204_1090026	Not Available	550	Open in IMG/M
3300017411\|Ga0182208_1074348	Not Available	599	Open in IMG/M
3300017411\|Ga0182208_1085588	Not Available	573	Open in IMG/M
3300017411\|Ga0182208_1094758	Not Available	555	Open in IMG/M
3300017415\|Ga0182202_1053973	Not Available	680	Open in IMG/M
3300017415\|Ga0182202_1087037	Not Available	586	Open in IMG/M
3300017415\|Ga0182202_1093400	Not Available	573	Open in IMG/M
3300017415\|Ga0182202_1124617	Not Available	521	Open in IMG/M
3300017420\|Ga0182228_1091131	Not Available	571	Open in IMG/M
3300017424\|Ga0182219_1133314	Not Available	511	Open in IMG/M
3300017425\|Ga0182224_1045055	Not Available	758	Open in IMG/M
3300017425\|Ga0182224_1073883	Not Available	651	Open in IMG/M
3300017427\|Ga0182190_1027003	Not Available	922	Open in IMG/M
3300017427\|Ga0182190_1111588	Not Available	576	Open in IMG/M
3300017427\|Ga0182190_1133458	Not Available	541	Open in IMG/M
3300017433\|Ga0182206_1054756	Not Available	705	Open in IMG/M
3300017433\|Ga0182206_1060903	Not Available	683	Open in IMG/M
3300017433\|Ga0182206_1125873	Not Available	543	Open in IMG/M
3300017433\|Ga0182206_1138617	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	526	Open in IMG/M
3300017433\|Ga0182206_1143498	Not Available	520	Open in IMG/M
3300017436\|Ga0182209_1105544	Not Available	592	Open in IMG/M
3300017436\|Ga0182209_1120092	Not Available	568	Open in IMG/M
3300017438\|Ga0182191_1054846	Not Available	750	Open in IMG/M
3300017442\|Ga0182221_1052923	Not Available	721	Open in IMG/M
3300017442\|Ga0182221_1084038	Not Available	627	Open in IMG/M
3300017442\|Ga0182221_1122402	Not Available	558	Open in IMG/M
3300017443\|Ga0182193_1054698	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	774	Open in IMG/M
3300017443\|Ga0182193_1063219	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	739	Open in IMG/M
3300017680\|Ga0182233_1078982	Not Available	595	Open in IMG/M
3300017683\|Ga0182218_1129956	Not Available	530	Open in IMG/M
3300017684\|Ga0182225_1124867	Not Available	527	Open in IMG/M
3300017685\|Ga0182227_1135732	Not Available	503	Open in IMG/M
3300017686\|Ga0182205_1065467	Not Available	694	Open in IMG/M
3300017686\|Ga0182205_1093531	Not Available	618	Open in IMG/M
3300025899\|Ga0207642_10467522	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300025942\|Ga0207689_11018374	Not Available	698	Open in IMG/M
3300026089\|Ga0207648_12007120	Not Available	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	95.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.26%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	95.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.26%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	95.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.26%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	95.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.26%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015288	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017417	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0157378_116317251	3300013297	Miscanthus Rhizosphere	MAPKRGGGNAKRAAIGVSHDKEWVPSLMGEMELNEMVEAGVLPDRVIAE*
Ga0157378_122299351	3300013297	Miscanthus Rhizosphere	MAPKRGGGNAKKAATGVSRDKEWVPSLMGEMELHE
Ga0157377_116576971	3300014745	Miscanthus Rhizosphere	MAPKRGGGNLKKAATRASHDKEWVSSLMGEMELNDMVEVC
Ga0182122_10196761	3300015267	Miscanthus Phyllosphere	MAPKRGDGNPKKATAGASHDKEWVPSNIGEAELNRMLEAGILPDRITAG
Ga0182154_10053262	3300015268	Miscanthus Phyllosphere	MAPKRGGGNPKKAAVGASHDNEWVPSLMGEMELNEMVEAGILPNRITAG*
Ga0182154_10616071	3300015268	Miscanthus Phyllosphere	MAPKRGVGNPKKVAARSSHDKEWVLSLMGEAELNGMVEAG
Ga0182113_10408711	3300015269	Miscanthus Phyllosphere	MALKRGGGNPKKAATGTSRDKEWVPSLMGETELNEMVVAGILPERVIAGWRPVDGE
Ga0182113_10524052	3300015269	Miscanthus Phyllosphere	MAPKRGGGNAKKAAAGTSRDKEWGPSLMGKTELNEMVEAGVLPDRVTIGWRPVDGEPYP
Ga0182188_10199901	3300015274	Miscanthus Phyllosphere	MAPKRGVGNPKKAATGSSRDKEWVPSLMGEAELNGMVEAGFLPDRVTAGWRPANSE
Ga0182188_10607151	3300015274	Miscanthus Phyllosphere	MAPKRGGGNPKKVAVGVSHDKEWVPLLMGETNLNGVVEEGVLPDRVTIGWRPTDGE
Ga0182172_10296601	3300015275	Miscanthus Phyllosphere	MAPKRGGGNAKKAATGASHDKEWVLSLMGETDLNEMEKAGVLHLVEIR
Ga0182170_10257311	3300015276	Miscanthus Phyllosphere	MAPKRGGGNAKKAAAGSSRDKEWVPSLMGETEPNEMVEASILDHVTTGWRPANGEP
Ga0182170_10283011	3300015276	Miscanthus Phyllosphere	MASKRGGGNPKKAASRASCDNEWVPSLMGETELNEMVEVGVLPDCI
Ga0182170_10761362	3300015276	Miscanthus Phyllosphere	GGGNAKKAAAGTSHDTEWVPSLLGEMKLNEMVEAGVLPDRVTVGWCPAER*
Ga0182170_10763731	3300015276	Miscanthus Phyllosphere	MAPKRGGGNPKKATAGASRDKEWVQSLMGETELNEMVEAGVLPDRVTTGWCPA
Ga0182128_10725921	3300015277	Miscanthus Phyllosphere	MAPKKGGGNPKKAAARTSRDKEWVPSLMGEMELNEMVAAGIPLK*
Ga0182128_10726081	3300015277	Miscanthus Phyllosphere	MAPKRGGGNAKKATAGTSHDQEWVPSLMGEMELNEMVAAGVLTKRVELFVVSNFG*
Ga0182174_10241012	3300015279	Miscanthus Phyllosphere	MAPKRGGGNPKKAASGGSHDNEWVSSLMGEMDLNEMV
Ga0182174_10576132	3300015279	Miscanthus Phyllosphere	MAPKRGGGNAKKATAGASQDHEWVSSLMGETELNGMVEASILPDRVTVGWR
Ga0182160_10670542	3300015281	Miscanthus Phyllosphere	MAPKRGGGNTKKAPTGVSHDKEWVPLLMGETELNEMVEAGILPDRV
Ga0182156_10355892	3300015283	Miscanthus Phyllosphere	MAPKRGGGSTKKAAAGVSRDKEWVPSLMGETELNEM
Ga0182156_10533511	3300015283	Miscanthus Phyllosphere	MAPKRGGGNPKKVAAGASHDKEWLPSLMGEMELNEMVAAGVLPKRVELFVVSNFG*
Ga0182171_10406251	3300015287	Miscanthus Phyllosphere	MALKRGGGNPKKAVARASHDKEWVSSLMGETDLNEMVEASVPPDRFTAGWCPADGE
Ga0182171_10606001	3300015287	Miscanthus Phyllosphere	MASKRGGGNPKKAAAGVSHDKKWVPSLMGETELNEMVE
Ga0182173_10670051	3300015288	Miscanthus Phyllosphere	MAPKRGGGNAKKASTRASHDKEWVPILMGETELNEM
Ga0182138_10351611	3300015289	Miscanthus Phyllosphere	MGLKRGGGNTKKAAAGTSRDKECVPSLMGETELNEMVAAGVLP*
Ga0182138_10425481	3300015289	Miscanthus Phyllosphere	MALKRGKGNAKNAAAGASHDKEWVSSLMGETELNEMVEAGDLPNRVTTGWRPADGEPY
Ga0182125_10312171	3300015291	Miscanthus Phyllosphere	MAPKRGGGNPKKAATGMSRDKEWVLSLMGETELNEMVEAGVLPDHDTVRWCSVDGEP*
Ga0182141_10247641	3300015292	Miscanthus Phyllosphere	MVLKRGGGNPKRAAVEMSHDKEWVPSLMGETELNEMVAAGVLPK*
Ga0182141_10493021	3300015292	Miscanthus Phyllosphere	MASKRGGGNPKKAAIGASHDKECVLSLMGEMELNEMV
Ga0182126_10365841	3300015294	Miscanthus Phyllosphere	MAPKRGVGNPKKAAARTSRDKEWVPSLMGEMELNEMVAAGIPLK*
Ga0182126_10407932	3300015294	Miscanthus Phyllosphere	MAPKRGGGNAKKAATGASHDKEWVPSLMGEMELNEMVEAGVLPN*
Ga0182126_10666412	3300015294	Miscanthus Phyllosphere	MAPKRGGGNPKKAAIGASRDKEWVLSLMGEMELDKMVEAGVLPD*
Ga0182126_10938061	3300015294	Miscanthus Phyllosphere	MAPKRGRGNAKKAAAGTSRDKEWVPSLMGETELNEMVEAGVLPD
Ga0182157_10119101	3300015296	Miscanthus Phyllosphere	MAPKRGSGNTKKVADGASHDKEWVLSLMGEMELNEMVEAGILPNRITAG*
Ga0182157_10590671	3300015296	Miscanthus Phyllosphere	MVPKRGGGNPKKAATRVSHDKEWVSSLLGEMKLNEMVETGVLPDR
Ga0182106_10762511	3300015298	Miscanthus Phyllosphere	MAPKRGGGNVKKVAAGASHDKEWVPSVMGETKLNEMVEVDV
Ga0182108_10897941	3300015300	Miscanthus Phyllosphere	MVPKRGGGNAKKAATGMSRDKECVPSLMGETELNEMVEAGVLPDHDTVRWCSVDGEP*
Ga0182143_10205052	3300015302	Miscanthus Phyllosphere	MAPKRGGGNAKKAATEVSRDKEWVTSLMGVTKLNE
Ga0182143_10739871	3300015302	Miscanthus Phyllosphere	MTPKRGGGNPKKTAAKASYDKEWVPSLIGEIELSEMVEASILPD*
Ga0182123_10453691	3300015303	Miscanthus Phyllosphere	MAPKRGGGNPKKAATGTSRDKEWVPSLMGEMELNEMVAVGILPK*
Ga0182123_10803351	3300015303	Miscanthus Phyllosphere	MALKRGGGNAKKAAIGASHGKEWVPSLMWETEVNEIVE
Ga0182123_10922482	3300015303	Miscanthus Phyllosphere	MAPKRGGGNAKKVAIGASRNKEWVPSLMGETKLNEMVETGILPDRVIIASGRR*
Ga0182112_10847291	3300015304	Miscanthus Phyllosphere	MAPKRGVGNPKKAAARASHDNEWVPSLMGEAEINRMVEAGILSDRVTAG*
Ga0182112_10999321	3300015304	Miscanthus Phyllosphere	MAPKRGGGNAKKAAAGTSHDKERVPSLMGETELNEMVETS
Ga0182144_10172751	3300015307	Miscanthus Phyllosphere	MALKRGGGNPKKAATGTSRDKEWVPSLMGEMELNEMVAVGILPK*
Ga0182144_10344391	3300015307	Miscanthus Phyllosphere	MTPKRGVGNPKKATAGTSHDQEWVPSLMGEMELNEMVAAGVLTKRVELFVVSNFG*
Ga0182142_10146771	3300015308	Miscanthus Phyllosphere	MAPKRGGGNVKKAAIGASHDKEWVPSLMGEMELNEMVEVGVLLDR
Ga0182142_10483751	3300015308	Miscanthus Phyllosphere	MAPKRGVGNLKKVAAGSSRDKEWVPSLMGEAELNGMVEAGFLPDRVTAGWRPANSELYPM
Ga0182140_10255011	3300015314	Miscanthus Phyllosphere	MAPKRGGGNPKKVAVWTSRDKECLPSLMGEKELNEMVEAGVLPDRVTAGWCPANGEP*
Ga0182140_10443571	3300015314	Miscanthus Phyllosphere	MALKRGGGNAKKAVTGASCDKEWVPTLMEETELNKMVEAGVLPDCVTT*
Ga0182140_10552121	3300015314	Miscanthus Phyllosphere	MAPKKGGGNAKKAATGASRDKEWVPSLMGETELNEMVEAGDLPDRVTVGWHPADGEP
Ga0182127_10784352	3300015321	Miscanthus Phyllosphere	MAPKRRGGNPKKAAAGTSRDKEWVPSLMGETELNEMVEAGVLP
Ga0182110_10518241	3300015322	Miscanthus Phyllosphere	MAPKRGGGNAKKANAVMSHEKEWVSSLMQETELNEMVEAGVLPDRFTAGWRPADEIVV
Ga0182187_11594971	3300015341	Miscanthus Phyllosphere	MASKRGGGNPKKAATGASYDKEWMSSLMGEAELNGMVEVGILPDRITTGWR
Ga0182187_11665541	3300015341	Miscanthus Phyllosphere	MASKKGGGNPKKTVAGASHDMEWVPSLMGETKLNEMVEAGILPDRATAGWRLT
Ga0182109_10561651	3300015342	Miscanthus Phyllosphere	MALKRGGGNPKKAVARASHDKEWVSSLMGETDLNEMVEASVPPDRF
Ga0182109_11578691	3300015342	Miscanthus Phyllosphere	MAPKRRGGNPKKAAAGASRDNEWVPSLMGETELNEMVEAGVLPDRITVG*
Ga0182109_12236691	3300015342	Miscanthus Phyllosphere	MVPKRGGGNAKKAAAGVNRDKEWVPSLLGEMELNEMVDAGVLPDRVTAGWRLA
Ga0182155_10579541	3300015343	Miscanthus Phyllosphere	MAPKRGVGNLKKVAARSSHDKEWVLSLMGEAELNGMVEAGVLLDRVTAG*
Ga0182155_10836352	3300015343	Miscanthus Phyllosphere	MAPKKGSGNPKKATAGASHDNEWVPSLMGEAEINRMVEAGVLPDRVTAG*
Ga0182155_11455161	3300015343	Miscanthus Phyllosphere	MVPKRGGGNAKKAATGASHDNEWVHSLMGKTELNEMVEASILPDRVTAGWRPADGE
Ga0182155_11683332	3300015343	Miscanthus Phyllosphere	MAPKKGGGNAKKVAIGASRDKKWVPSLMGETELIEMVEAGVLPDRVTAGWHLADG*
Ga0182189_10730552	3300015344	Miscanthus Phyllosphere	MAPKRGGGNPKKVAVGASHDNEWVPSLMGETELNEMVEVGVLPN
Ga0182189_10923341	3300015344	Miscanthus Phyllosphere	MVSMRGGGNAKKAAAGTSHDTEWVPSLLGEMKLNEMVEAGVLPDR
Ga0182189_11076202	3300015344	Miscanthus Phyllosphere	MAPKRGGGNTKKAAARVSHDKEWVPSLRGETELNEMVEAGVLPDCVTVG*
Ga0182189_11986041	3300015344	Miscanthus Phyllosphere	MALKRGSASMKKAATRMSHDKEWVLSLMGEMDLNEMVEVCVLP
Ga0182111_11705471	3300015345	Miscanthus Phyllosphere	MASKRGFGNLKKATTGESHDNEWVSLLMGDMKLNGMVEAGVLPDCVTA
Ga0182139_11171641	3300015346	Miscanthus Phyllosphere	MVSMRGGGTAKKAAAGTSHDTEWVPSLLGEMKLNEM
Ga0182139_11328521	3300015346	Miscanthus Phyllosphere	MVPKRGVGNPKKATAGASHDNEWVSSLMGETKLNRMVEAGVLPDRVTTG
Ga0182139_11685981	3300015346	Miscanthus Phyllosphere	MAPKRGGGNPKKAVAEASRDNEWVPSLMGETELNDMVEAGVLPDRVTVGWRPTDGEPYP
Ga0182139_12008051	3300015346	Miscanthus Phyllosphere	MAPKRGKGSAKKAATKASYDKEWVPSLMGETELNEMVEAGVLPNHVTAG
Ga0182139_12159851	3300015346	Miscanthus Phyllosphere	MAPKRGVGNPKKVAAGSSHYKEWVPSLLGEAELNGMAEEGILPDRVTA*
Ga0182139_12165681	3300015346	Miscanthus Phyllosphere	MAPKRGGGNQKKANARASHDNEWVPSLMGETELNKMMEAGILPD
Ga0182177_10208992	3300015347	Miscanthus Phyllosphere	MASKRGGGNPKKAAARTSRDKEWVPSLMGEMELNEMVAAGIPLK*
Ga0182177_11476372	3300015347	Miscanthus Phyllosphere	MAPKRRVGNPKKAAAGASRDNEWVPSLMEEVEINRIMEVDVLPDRVTAGWLPANGE
Ga0182161_11377391	3300015351	Miscanthus Phyllosphere	MAPKRGGGNPKKVATGASRDKEWVPSLMGETELNRMVEASVLPDRVTAG*
Ga0182161_11627911	3300015351	Miscanthus Phyllosphere	MAPKRGGGNAKKAATGVSRDMEWVPSLMGETKLNKMVEAGILPDR
Ga0182161_11853182	3300015351	Miscanthus Phyllosphere	MALQRGGGNTKKVAAGASRDKEWVPSLMGETKLNEMVEAGVLPDHVTAG*
Ga0182161_12266521	3300015351	Miscanthus Phyllosphere	MAPKRGGGNPKKAATGTSHDKEWVPSLMGEMEPNEMVA
Ga0182159_11541592	3300015355	Miscanthus Phyllosphere	MVPKRGGGNAKKAAAGTSRDKEWVLSLMGEMELNEMVEAGVLPDRVTTGWRPA
Ga0182159_11866872	3300015355	Miscanthus Phyllosphere	MAPKRGVGNPKKVATGASRYNEWVSSLMRETQINGMVEAGI
Ga0182159_12545801	3300015355	Miscanthus Phyllosphere	MASKRGGGNAKKATTEASHDKEWVPSLMGETKLDEMVEAGVLPD
Ga0182159_12824772	3300015355	Miscanthus Phyllosphere	MAPKRGGGNAKKAAARASLDKEWVPSLIGETELNEMVEA
Ga0182159_13087292	3300015355	Miscanthus Phyllosphere	MAPKRGGGNTKKAVAGASHEKEWVPSVMGETELNKMVEAGVLPDHVTAGC
Ga0182145_10664501	3300015361	Miscanthus Phyllosphere	MAPKWGGGNQKKVAIRASHDKEWVPSLMEEMELNEMVEVDILPN*
Ga0182145_11300662	3300015361	Miscanthus Phyllosphere	MTSKRGGGNPKKAATGTSRDKEWVPSLMGETELNEMVAAGILPERVIAGW
Ga0182203_11393351	3300017404	Miscanthus Phyllosphere	MAPKRGRGNAKKAAVGTSRDKEWVPSLMGETELNKMVEAGVL
Ga0182220_10374191	3300017407	Miscanthus Phyllosphere	MAPKRGGGNTKKAAARVSRDKEWAPSLMGETELNEMVEAGVLLDRVTAGWCPADGE
Ga0182220_10958541	3300017407	Miscanthus Phyllosphere	MALQRGGGNTKKVAAGASRDKEWVPSLMGETKLNEMVEAGVLPDRVII
Ga0182204_10900261	3300017409	Miscanthus Phyllosphere	MKKAAAEMSRDKEWVPSLMGETELNEMVEAGVLLDRVTVGWRPTNG
Ga0182207_11597601	3300017410	Miscanthus Phyllosphere	MAPKRGGGNAKKAAAGVSRDMEWVPSLMGETKLNKMVE
Ga0182208_10743481	3300017411	Miscanthus Phyllosphere	MVPKRGGGNAKKAVAGASRDKEWVPSLMGETELNEMVEAGVLPERVTAGWRPADGEPY
Ga0182208_10855882	3300017411	Miscanthus Phyllosphere	MAPKRGGGNAKKAATGASHDKEWVPSLMEEMELNEMVEVDILPN
Ga0182208_10947581	3300017411	Miscanthus Phyllosphere	MAPKRGGGNAKKVAAGASHDKEWVPSLMWETKLNGMVEVGVLLD
Ga0182208_11155192	3300017411	Miscanthus Phyllosphere	MRGGGNAKKAAAGTSHDTEWVPSLLGEMKLNEMVEAGVLPD
Ga0182222_10596601	3300017413	Miscanthus Phyllosphere	MAPKRGGGNMKKAATGVSHDMEWVQSLMGEMDLNEMV
Ga0182202_10539732	3300017415	Miscanthus Phyllosphere	MAPKKGSGNPKKATAGASHDNEWVPSLMGEAEINRMVEAGVLPDRVTAG
Ga0182202_10870372	3300017415	Miscanthus Phyllosphere	MAPKRGGGNPKKAAARTSHDKEWVPSLMGETELNEMVAAGVLPK
Ga0182202_10934002	3300017415	Miscanthus Phyllosphere	MASKRGGGNTKKAAVGASRDKEWVPSLMGETKLNEMVEAGILPDRITAETT
Ga0182202_11246171	3300017415	Miscanthus Phyllosphere	MAPKRGVGNLKKVAAGSSRDKEWVLSLMGEAKLNGMVEAGVLPDHVTTGSRPAN
Ga0182230_10775861	3300017417	Miscanthus Phyllosphere	MAPKRGGGNAKKAATGVSRDKEWVPSLMGEMELHEMVEVGVL
Ga0182228_10911311	3300017420	Miscanthus Phyllosphere	MAPKRGGGNPKKVATGASHDKECVPSLMGETELNEIMEVGVLPDRITTRWRPADGEP
Ga0182219_10841691	3300017424	Miscanthus Phyllosphere	VKKVAAGVSRDKEWVPSLMGETELNEMVEAGVLPERVTAGWRPADGEPYPMPHTNEL
Ga0182219_11333141	3300017424	Miscanthus Phyllosphere	MAPKRGVGNPKKVTVGASHDNEWVPSLMGDMELNGMVEASVLPDR
Ga0182224_10450551	3300017425	Miscanthus Phyllosphere	MAPKKGDGNAKKAATGASHDKEWVPSLMGETELNEMVEAGVLPDRVTTGWRPADD
Ga0182224_10738832	3300017425	Miscanthus Phyllosphere	MAPKRGVGNPKKATAGASHDNEWVPSLMGEMELNEMVEAGVLPN
Ga0182190_10270031	3300017427	Miscanthus Phyllosphere	MASKKGGGNPKKTVAGASHDMEWVPSLMGETKLNEMVEAGILPDRATAGWR
Ga0182190_11115881	3300017427	Miscanthus Phyllosphere	MTSKRGGGNPKKAATGTSRDKEWVPSLMGETELNEMVVAGIL
Ga0182190_11334581	3300017427	Miscanthus Phyllosphere	MALQRGGGNTKKVAAGASRDKEWVPSLMGETKLNEMVEAGVLPDHVTTG
Ga0182206_10547561	3300017433	Miscanthus Phyllosphere	MAPKKGGGNAKKAATGASRDKEWVPSLMGETELNEMVEAG
Ga0182206_10609031	3300017433	Miscanthus Phyllosphere	MAPKRGVGNPKKVAVGASRDSEWVPSLMGEAEINRMVEAGVLPDRVTAGW
Ga0182206_11258733	3300017433	Miscanthus Phyllosphere	MAPKRGGGNTKKAAAGTSRDKEWVPSLMGETELNEMVEVGVLPDHV
Ga0182206_11386172	3300017433	Miscanthus Phyllosphere	MASKRGGGNPKKAASGASHDKEWVPSLMGETELNEMVEAGVLPDRVTTGWRPADD
Ga0182206_11434981	3300017433	Miscanthus Phyllosphere	MAPKRGGGNQKKANARASHDNEWVPSLMGETELNKMMEAGILPDRITAG
Ga0182209_11055441	3300017436	Miscanthus Phyllosphere	MAPKRGGGNPKKAVAGASHDKEWVSSVMGETELNEMVEAGVL
Ga0182209_11200921	3300017436	Miscanthus Phyllosphere	MAPKRGGGNTKKAPTGVSHDKEWVPLLMGETELNEMVEAGI
Ga0182191_10548461	3300017438	Miscanthus Phyllosphere	MAPKRGSGNTKKAAVGASHDKEWVLSLMEEMELNGMAKVGIL
Ga0182221_10529231	3300017442	Miscanthus Phyllosphere	MAPKRGGGNPKKATVGASRDKEWVPSLMGEVERNGMVEVGVLP
Ga0182221_10840382	3300017442	Miscanthus Phyllosphere	MALKRGGGNPKKATIGASRDKEWVPSLMGETELNDMVETGILPDHV
Ga0182221_11224022	3300017442	Miscanthus Phyllosphere	MAPKRGGGNPKKAVAEASRDNEWVPSLMGETELNDMVEAGVLPDRVTVG
Ga0182193_10546982	3300017443	Miscanthus Phyllosphere	MAPKRGGGNPKKAAAGASRDKEWVPSLMGETELNEMVEACVLLDRVTTG
Ga0182193_10632192	3300017443	Miscanthus Phyllosphere	MAPKRGGGNTKKAAAGTSRDKECVPSLMGETELNEMVAAGVLP
Ga0182233_10789821	3300017680	Miscanthus Phyllosphere	MAPKRGGGNPKKAAIGESHDKEWVLSLMGETELNGMVEVAV
Ga0182218_11250491	3300017683	Miscanthus Phyllosphere	MGGGNAKKATAGASHDKEWVQSLMGEMELNEMVEV
Ga0182218_11299561	3300017683	Miscanthus Phyllosphere	MAPKRGGGNAKKAATGVSHDKEWVPSLRGETELNEMVEAGVLPDCVTVG
Ga0182225_11248671	3300017684	Miscanthus Phyllosphere	MVPKRGGGNAKKVAAGVSRDKEWVPSLMGEMKLNEMVEAGLLPDRVTAGWRP
Ga0182227_11357322	3300017685	Miscanthus Phyllosphere	MAPKKGGGNPKKAAAGTSHDKEWVPSLMGETELNGMVEAGVLADRVTARWRSA
Ga0182205_10654671	3300017686	Miscanthus Phyllosphere	MASKRGGGNPKKAATGASHDKEWVPSLMGEMELNEMVAAGIPLK
Ga0182205_10935311	3300017686	Miscanthus Phyllosphere	MAVKRGGGNSKKATIGASHDNEWVPSLMGEMELNEMVEAGVLPNRITAG
Ga0207642_104675221	3300025899	Miscanthus Rhizosphere	MAPKRGGGNTNKAAIEASHDKEWVPPLMGEMKLNEM
Ga0207689_110183741	3300025942	Miscanthus Rhizosphere	MAPKRGDGNPKKVATEASHDKEWVPSFMGDTELIEMVEAGVLPV
Ga0207648_120071201	3300026089	Miscanthus Rhizosphere	MASKRGGGNTKKAATGVSHDKEWVPSLMGETELNEMVEAGVLPDRVTVGWR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059510

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences