Metagenome / Metatranscriptome Family F059465

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059465
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	81 residues
Representative Sequence	VIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Number of Associated Samples	108
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.33 %
% of genes near scaffold ends (potentially truncated)	39.55 %
% of genes from short scaffolds (< 2000 bps)	77.61 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.507 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.866 % of family members)
Environment Ontology (ENVO)	Unclassified (35.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.791 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.54% β-sheet: 0.00% Coil/Unstructured: 50.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF03446	NAD_binding_2	28.36
PF04542	Sigma70_r2	22.39
PF14833	NAD_binding_11	17.16
PF01738	DLH	7.46
PF08281	Sigma70_r4_2	5.97
PF01026	TatD_DNase	2.99
PF00072	Response_reg	0.75
PF12804	NTP_transf_3	0.75
PF02371	Transposase_20	0.75
PF05598	DUF772	0.75
PF00069	Pkinase	0.75
PF01019	G_glu_transpept	0.75
PF00005	ABC_tran	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	22.39
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	22.39
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	22.39
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	22.39
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.99
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.75
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.51 %
Unclassified	root	N/A	1.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.51 %
Unclassified	root	N/A	1.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.51 %
Unclassified	root	N/A	1.49 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.42 %
Unclassified	root	N/A	1.49 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	50.75 %
Unclassified	root	N/A	1.49 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	50.75 %
Unclassified	root	N/A	1.49 %

Name	Rank	Taxonomy	Distribution
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	47.76 %
Unclassified	root	N/A	1.49 %

Name	Rank	Taxonomy	Distribution
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	17.16 %
Unclassified	root	N/A	1.49 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.75 %

Name	Rank	Taxonomy	Distribution
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	12.69 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	2.24 %
Unclassified	root	N/A	1.49 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	11.94 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	2.24 %
Unclassified	root	N/A	1.49 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.75 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	11.94 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	2.24 %
Unclassified	root	N/A	1.49 %
Myxococcus stipitatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	0.75 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16803770	All Organisms → cellular organisms → Bacteria → Proteobacteria	1316	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2342879	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300000550\|F24TB_10355595	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300000559\|F14TC_100345149	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300001427\|JGI20200J14955_1007424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1306	Open in IMG/M
3300003659\|JGI25404J52841_10003657	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3054	Open in IMG/M
3300003659\|JGI25404J52841_10017517	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300004114\|Ga0062593_100072199	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300004479\|Ga0062595_101059629	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300005093\|Ga0062594_100001225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5831	Open in IMG/M
3300005294\|Ga0065705_10053912	All Organisms → cellular organisms → Bacteria → Proteobacteria	969	Open in IMG/M
3300005295\|Ga0065707_10422374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	829	Open in IMG/M
3300005329\|Ga0070683_100288432	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300005332\|Ga0066388_100325407	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300005332\|Ga0066388_101083572	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1354	Open in IMG/M
3300005332\|Ga0066388_105114435	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005332\|Ga0066388_106601588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	585	Open in IMG/M
3300005336\|Ga0070680_100088749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2558	Open in IMG/M
3300005355\|Ga0070671_100056017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	3280	Open in IMG/M
3300005435\|Ga0070714_101125665	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300005444\|Ga0070694_100461829	All Organisms → cellular organisms → Bacteria → Proteobacteria	1004	Open in IMG/M
3300005456\|Ga0070678_102372147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	504	Open in IMG/M
3300005547\|Ga0070693_100024580	All Organisms → cellular organisms → Bacteria	3232	Open in IMG/M
3300005764\|Ga0066903_100102378	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3877	Open in IMG/M
3300005764\|Ga0066903_102703005	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005764\|Ga0066903_106049003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	634	Open in IMG/M
3300005983\|Ga0081540_1000246	All Organisms → cellular organisms → Bacteria → Proteobacteria	56905	Open in IMG/M
3300006573\|Ga0074055_11378597	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300006755\|Ga0079222_10459375	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300006871\|Ga0075434_101285411	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	743	Open in IMG/M
3300006954\|Ga0079219_11495021	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300007076\|Ga0075435_101982580	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300009168\|Ga0105104_10000047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	78300	Open in IMG/M
3300009174\|Ga0105241_11215710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	714	Open in IMG/M
3300010043\|Ga0126380_11474567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	601	Open in IMG/M
3300010046\|Ga0126384_11006101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	759	Open in IMG/M
3300010046\|Ga0126384_11060961	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300010048\|Ga0126373_11077728	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300010360\|Ga0126372_10030758	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3364	Open in IMG/M
3300010360\|Ga0126372_13108843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	515	Open in IMG/M
3300010361\|Ga0126378_11447450	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	778	Open in IMG/M
3300010366\|Ga0126379_10167560	All Organisms → cellular organisms → Bacteria → Proteobacteria	2072	Open in IMG/M
3300010366\|Ga0126379_12095051	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300010376\|Ga0126381_100416043	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300010376\|Ga0126381_100438675	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300010398\|Ga0126383_11804707	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300011107\|Ga0151490_1313858	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	667	Open in IMG/M
3300012948\|Ga0126375_11184240	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012971\|Ga0126369_10032807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	4292	Open in IMG/M
3300014497\|Ga0182008_10081170	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300014969\|Ga0157376_11551257	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300015371\|Ga0132258_10332343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3751	Open in IMG/M
3300016422\|Ga0182039_10704146	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300016445\|Ga0182038_10385476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1171	Open in IMG/M
3300017947\|Ga0187785_10429871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	642	Open in IMG/M
3300017959\|Ga0187779_10139718	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300017959\|Ga0187779_10907019	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300017974\|Ga0187777_10049302	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2711	Open in IMG/M
3300018032\|Ga0187788_10499541	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	526	Open in IMG/M
3300018064\|Ga0187773_10097570	All Organisms → cellular organisms → Bacteria → Proteobacteria	1443	Open in IMG/M
3300021081\|Ga0210379_10556150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	511	Open in IMG/M
3300021560\|Ga0126371_11007592	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300021560\|Ga0126371_12409937	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300025461\|Ga0208851_1000499	All Organisms → cellular organisms → Bacteria → Proteobacteria	17030	Open in IMG/M
3300025479\|Ga0208588_1004110	All Organisms → cellular organisms → Bacteria	3930	Open in IMG/M
3300025920\|Ga0207649_10019036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3919	Open in IMG/M
3300025931\|Ga0207644_10074811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	2487	Open in IMG/M
3300027902\|Ga0209048_10132004	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1883	Open in IMG/M
3300031538\|Ga0310888_10186423	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300031543\|Ga0318516_10595107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	632	Open in IMG/M
3300031544\|Ga0318534_10092665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1725	Open in IMG/M
3300031544\|Ga0318534_10241664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1042	Open in IMG/M
3300031561\|Ga0318528_10362780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	778	Open in IMG/M
3300031562\|Ga0310886_10687631	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300031564\|Ga0318573_10249495	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300031572\|Ga0318515_10081261	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300031572\|Ga0318515_10374209	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300031668\|Ga0318542_10317105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	799	Open in IMG/M
3300031682\|Ga0318560_10039432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2281	Open in IMG/M
3300031713\|Ga0318496_10829274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	509	Open in IMG/M
3300031716\|Ga0310813_11807953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	574	Open in IMG/M
3300031720\|Ga0307469_10019298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3656	Open in IMG/M
3300031720\|Ga0307469_10306827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1310	Open in IMG/M
3300031723\|Ga0318493_10049197	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300031723\|Ga0318493_10716092	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031724\|Ga0318500_10692456	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300031748\|Ga0318492_10547023	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	616	Open in IMG/M
3300031751\|Ga0318494_10642662	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300031765\|Ga0318554_10701174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	568	Open in IMG/M
3300031768\|Ga0318509_10755338	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031769\|Ga0318526_10291743	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300031769\|Ga0318526_10329515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	624	Open in IMG/M
3300031793\|Ga0318548_10303760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	784	Open in IMG/M
3300031795\|Ga0318557_10134838	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300031797\|Ga0318550_10231865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	895	Open in IMG/M
3300031797\|Ga0318550_10421183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	646	Open in IMG/M
3300031799\|Ga0318565_10467105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	610	Open in IMG/M
3300031831\|Ga0318564_10066931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1579	Open in IMG/M
3300031835\|Ga0318517_10120312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1162	Open in IMG/M
3300031860\|Ga0318495_10337565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	668	Open in IMG/M
3300031879\|Ga0306919_10692493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	785	Open in IMG/M
3300031890\|Ga0306925_12233529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	508	Open in IMG/M
3300031897\|Ga0318520_10129941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1443	Open in IMG/M
3300031910\|Ga0306923_11935029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	601	Open in IMG/M
3300031910\|Ga0306923_12033410	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031912\|Ga0306921_10609721	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300032001\|Ga0306922_10535385	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1246	Open in IMG/M
3300032001\|Ga0306922_11937737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	576	Open in IMG/M
3300032009\|Ga0318563_10267622	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300032010\|Ga0318569_10588988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	518	Open in IMG/M
3300032035\|Ga0310911_10101497	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300032044\|Ga0318558_10017997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2810	Open in IMG/M
3300032052\|Ga0318506_10244889	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300032066\|Ga0318514_10476790	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300032067\|Ga0318524_10785013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	504	Open in IMG/M
3300032076\|Ga0306924_11367700	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300032076\|Ga0306924_12411318	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	530	Open in IMG/M
3300032205\|Ga0307472_100408448	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300032261\|Ga0306920_102237782	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	759	Open in IMG/M
3300032770\|Ga0335085_10252190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	2120	Open in IMG/M
3300032770\|Ga0335085_10311188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1862	Open in IMG/M
3300032782\|Ga0335082_10022930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	6698	Open in IMG/M
3300032782\|Ga0335082_10050920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4285	Open in IMG/M
3300032782\|Ga0335082_10213032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1828	Open in IMG/M
3300032893\|Ga0335069_10303379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1900	Open in IMG/M
3300033004\|Ga0335084_10001232	All Organisms → cellular organisms → Bacteria	23522	Open in IMG/M
3300033290\|Ga0318519_10823221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	572	Open in IMG/M
3300033412\|Ga0310810_10446188	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300033433\|Ga0326726_10143640	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300033433\|Ga0326726_10173496	All Organisms → cellular organisms → Bacteria → Proteobacteria	1978	Open in IMG/M
3300033480\|Ga0316620_10176180	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300033550\|Ga0247829_10508314	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.55%
Host-Associated	Host-Associated	10.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.31%
Plants	Host-Associated → Plants	10.45%
Aquatic	Environmental → Aquatic	2.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.48%
Freshwater	Environmental → Aquatic → Freshwater	2.24%
Peat	Environmental → Terrestrial → Peat	1.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.45%
Loam	Environmental → Terrestrial → Soil → Loam	10.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.49%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.24%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.49%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.49%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.22%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.24%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.24%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.49%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.49%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025479	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03946150	2088090014	Soil	VIKVSAVKFPSLLRPVRERLLAPLGRADQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYDQQGRFLERLDRATPPPKPE
ICChiseqgaiiDRAFT_23428793	3300000033	Soil	ERLLAPLGHTDQAERLLVETFRTLSTLCTRLADTVESQRLTRAGYRDQGRFLERLDRRPPSADPDPGGGRPD*
F24TB_103555953	3300000550	Soil	VKFPSLLRVRERLLAPLGHTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRDQGRFLERLDRRPPSAHPDPGGGRPE*
F14TC_1003451492	3300000559	Soil	VKFPSLLRVRERLLAPLGHTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRDQGRFLERLDRRPPSADPDPGGGRPD*
JGI20200J14955_10074241	3300001427	Arctic Peat Soil	VIKVTPVKFPSLLRPMRERLLAPLTHPDQAERLLAETFRTLGSLCTRLADMVEAQRLTRAGYDRQGRFLERLDRGPRQQPPE*
JGI25404J52841_100036573	3300003659	Tabebuia Heterophylla Rhizosphere	VKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCTRLADMVETQRLTRAGYRDQGRFLERLDRASPSAPPDPGGDRSG*
JGI25404J52841_100175173	3300003659	Tabebuia Heterophylla Rhizosphere	VIKVTGVKFPSLLRVRERFLAPRGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRSSPPPRQD*
Ga0062593_1000721992	3300004114	Soil	VIKVSGVKFPSLLRVRDRLLAPLGQTDQAERLLVETFRTLSTLCNRLADMVETQRLTRAGYRDQDRFLERLDRGGSSSRPD*
Ga0062595_1010596292	3300004479	Soil	MIKVTRVKFPSLMRVRDRLLAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRDRSSSRPD*
Ga0062594_1000012257	3300005093	Soil	MRVRDRLLAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRDRSSSRPD*
Ga0065705_100539122	3300005294	Switchgrass Rhizosphere	VKFPSLLRVRQRLLAPLGXTDQAERLLVETFRTXSTLCTRLADMVESQRLTRAGYHDQGRFLERLDRPTRSPHPDHDGSQPR*
Ga0065707_104223741	3300005295	Switchgrass Rhizosphere	VKFPSLLRVRQRLLAPLGHTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYHDQGRFLERLDRPTRSPHPDHDGSQPR*
Ga0070683_1002884323	3300005329	Corn Rhizosphere	VKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRDQGRFLERLDRSSPSAHPDSGGGRPD*
Ga0066388_1003254073	3300005332	Tropical Forest Soil	VIKVTGVKFPSLSRVRERFLAPRGQTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRDQGRFLERLDRSAPRPPRQD*
Ga0066388_1010835722	3300005332	Tropical Forest Soil	MRVRERLMAPLGHTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRPSRSSSPGHGGSQAD*
Ga0066388_1051144352	3300005332	Tropical Forest Soil	MKFPSLLEPMRQRLAAQLAPADQAERLLAETFRTLGALCTRLADLVESQRLARAGYRDQGRFLERLDHPAPPPSDPGPGR*
Ga0066388_1066015882	3300005332	Tropical Forest Soil	DLTKVMGVKFPSILRPVRERLLAPLGHPDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYHGQGRFLERLDRAAPPSKPE*
Ga0070680_1000887491	3300005336	Corn Rhizosphere	PMIKVTRVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRDRSSSRPD*
Ga0070671_1000560173	3300005355	Switchgrass Rhizosphere	VIKVTGVKFPSLLRVRERFLAPLGQTDQAERLLVETFRTLSTLCTRLADMVETQRLTRAGYRDQGRFLERLDRGGRSSRPE*
Ga0070714_1011256651	3300005435	Agricultural Soil	MIKVTRVKFPSLMRVRDRLLAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRDRSSSRP
Ga0070694_1004618292	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VIKVTGVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRDRSSSRPD*
Ga0070678_1023721471	3300005456	Miscanthus Rhizosphere	MIKVTRVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCARLADRVESQRLTRAGYRDQGRFLERLDRGGPSRPD*
Ga0070693_1000245805	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRVRDRLLAPLGQTDQAERLLVETFRTLSTLCARLADRVESQRLTRAGYRDQGRFLERLDRGGPSRPD*
Ga0066903_1001023783	3300005764	Tropical Forest Soil	VIKVTSVKFPSLMRVRDRLLAPLEHQDQAERLLVETFRTLSSLCSRLADVVESQRLTRAGYRGQGRFLERLDRAASAPKRD*
Ga0066903_1027030052	3300005764	Tropical Forest Soil	VIKVTGVKFPSLLRVRERLMAPLGQTDQAERLLVETFRTLSTLCTRVADMVESQRLTRAGYREQGRFLERLDRRAPPPRQE*
Ga0066903_1060490032	3300005764	Tropical Forest Soil	VRRVKFPSILRPVRERLLAPLGHPDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYHGQGRFLERLDRAAPPSKPE*
Ga0081540_100024619	3300005983	Tabebuia Heterophylla Rhizosphere	VIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYDRQGRFLERLDRRAGTPPARPE*
Ga0074055_113785972	3300006573	Soil	VIKVTGVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCTRLADMVETQRLTRAGYRDQGRFLERLDRGGRSSRPD*
Ga0079222_104593752	3300006755	Agricultural Soil	VIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCTRLANMVESQRLTRAGYDRQDRFLERLDRGAGAPPGRPE*
Ga0075434_1012854111	3300006871	Populus Rhizosphere	APGIRPVVHWPCPMIKVTRVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCARLADRVESQRLTRAGYRDQGRFLERLDRGGPSRPD*
Ga0079219_114950212	3300006954	Agricultural Soil	MIKVTGVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCSRLADRVESQRLTRAGYRDQGRFLERLDRGGPSSRPD*
Ga0075435_1019825801	3300007076	Populus Rhizosphere	VIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCTRLANMVESQRLTRAGYDRQDRFLERLDRGAGAPPSRPE*
Ga0105104_1000004753	3300009168	Freshwater Sediment	VKFPSLLRVRERLMAPLGHTDQAERLVVEAFRTLSTLCTRLADMVESQRLTRAGYHDQGRFLERLDRSPHPDQDGSQPR*
Ga0105241_112157102	3300009174	Corn Rhizosphere	KVTGVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCSRLADRVESQRLTRAGYRDQGRFLERLDRGGPSRPD*
Ga0126380_114745672	3300010043	Tropical Forest Soil	VIKVTGVKFPSLSRVRERFLAPRGQTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRDQGRFLERLDRGGPPPRQE*
Ga0126384_110061011	3300010046	Tropical Forest Soil	MGVKFPSILRPVRNQLLAPLGHPDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYHGQGRFLERLDRAAPPSKPE*
Ga0126384_110609611	3300010046	Tropical Forest Soil	VIKVTGVKFPSLLRVRERFLTPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRSAPRPPRQD*
Ga0126373_110777281	3300010048	Tropical Forest Soil	VIKVTGVKFPSLLRVRDRILTPLGQTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRDQGRFLERLDRRAPPPQQD*
Ga0126372_100307584	3300010360	Tropical Forest Soil	VIKVTGVKFPSLSRVRERFLAPRGQTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRDQGRFLERLDPSAPRPPRQD*
Ga0126372_131088432	3300010360	Tropical Forest Soil	VIKVTGVKFPSLVRVRERLLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYDRQDRFLERLDRRAPPSRPD*
Ga0126372_132025271	3300010360	Tropical Forest Soil	MRVRERLLAPLEHQDQAERLLVETFRTLSSLCSRLADVVESQRLTRAGYRGQGRFLERLDRAASAAKRD*
Ga0126378_114474501	3300010361	Tropical Forest Soil	RVVHWPLVRSLSRKGRGVIKVTGVKFPSLMRVRERLMAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYDRQGRFLERLDRRGGTPPARPE*
Ga0126379_101675604	3300010366	Tropical Forest Soil	MDADVIKVSSVKFPSLMRVRDRLLAPLEHQEEAERLLVETFRTLSSLCSRLADVVESQRLTRAGYRGQGRFLERLDRAASAPKRD*
Ga0126379_120950512	3300010366	Tropical Forest Soil	VIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRRAPPPRQD*
Ga0126381_1004160431	3300010376	Tropical Forest Soil	VIKVTGVKFPSLLRVRERFLTPLRQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRAAPPPRND*
Ga0126381_1004386752	3300010376	Tropical Forest Soil	VDLIKVRRVKFPSILRPVRERLLAPLGHPDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYHGQGRFLERLDRAAPPSKPE*
Ga0126383_118047072	3300010398	Tropical Forest Soil	VIKVTGVKFPSLSRVRERFLGPRGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRAAPPPRND*
Ga0151490_13138581	3300011107	Soil	LSRKGRGVIKVTGVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCTRLADMVETQRLTRAGYRDQGRFLERLDRGGRSSRPD*
Ga0126375_111842402	3300012948	Tropical Forest Soil	MGVKFPSILRPVRERLLAPLGHPDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYHGQGRFLERLDRAAPPSKPE*
Ga0126369_100328074	3300012971	Tropical Forest Soil	VAPFRGKDVDVIKVTSVKFPSLMRVRDRLLAPLEHQDQAERLLVETFRTLSSLCSRLADVVESQRLTRAGYRGQGRFLERLDRAASAPKRD*
Ga0182008_100811701	3300014497	Rhizosphere	MLKVTGVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLNRAGYRDQNRFL
Ga0157376_115512572	3300014969	Miscanthus Rhizosphere	VIKVTGVKFPSLLRVRERFLAPLGQTDQAERLLVETFRTLSTLCTRLADMVETQRLTRAGYRDQGRFLE
Ga0132258_103323433	3300015371	Arabidopsis Rhizosphere	VKFPSLLRPVRERLLAPLGHADQAERLLAETFRTLGSLCTRLADMVEAQRLTRAGYDRQGRFLERLDRGGPQHPPE*
Ga0182039_107041461	3300016422	Soil	VIKVTGVKFPSLLRVRDRFLAPLGQTEQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0182038_103854763	3300016445	Soil	RKGRPVIKVSRVKFPSLLRVRERFLTPLGQTDQAERLLVEAFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0163161_100177987	3300017792	Switchgrass Rhizosphere	MRVRDRLLAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRDRSSSRP
Ga0187785_104298712	3300017947	Tropical Peatland	DVDVIKVTSVKFPSLMRVRDRLLAPLEHQEEAERLLVETFRTLSSLCGRLADMVESQRLTRAGYRGQGRFLERLDRAAPPPKPD
Ga0187779_101397182	3300017959	Tropical Peatland	MGWPAPGVSLKVRAMKFPSLLEPMRQRLAAQLAPADQAERLLAETFRTLGVLCTRLADLVESQRLARAGYRDQGRFLERLDRPAPPPSDPGPTR
Ga0187779_109070192	3300017959	Tropical Peatland	VIKVSAVKFPSLLRPVRERLLAPLGHPDQAERLLAETFRTLGTLCTRLADLVESQRLQRAGYHAQDRFLERLDRRAPPPGSD
Ga0187777_100493024	3300017974	Tropical Peatland	MGWPAPGVSLKVRAMKFPSLLEPMRQRLAAQLAPADQAERLLAETFRTLGVLCTRLADLVESQRLARAGYRDQGRFLERLDRPVPPPSDPGPTR
Ga0187788_104995412	3300018032	Tropical Peatland	RGKDGDVIKVTRVKFPSLLRVRDRLLAPLEHQDQAERLLVETFRTLGSLCTRLADLVESQRLNRAGYHGQGRFLERLDRTATPPPKPE
Ga0187773_100975701	3300018064	Tropical Peatland	KDGDVIKVGAVKFPSLLRPVRERLLAPLGHPDQAERFLAETFRTLGTLCTRLADLVESQRLQRAGYHAQDRFLERLDRRAPPPGSD
Ga0210379_105561502	3300021081	Groundwater Sediment	PAPALSLKVRGMKFPSLLEPMRQRLAAQLGPADQAERVLAEAFRTLGALCTRLADLVESQRLARAGYRDQGRFLERLDRPAPPPADPTQPR
Ga0126371_110075922	3300021560	Tropical Forest Soil	VIKVTRVKFPSLLRVRDRFLAPLGQKDQAERLLVETFRTLSTLCTRLADIVESQRLTRAGYDRQDRYLERLDRAARGAQGAGAPPARPE
Ga0126371_124099372	3300021560	Tropical Forest Soil	VIKVTGVKFPSLMRVRERLMAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRGAPPRRHD
Ga0208851_100049915	3300025461	Arctic Peat Soil	VIKVTPVKFPSLLRPMRERLLAPLTHPDQAERLLAETFRTLGSLCTRLADMVEAQRLTRAGYDRQGRFLERLDRGPRQQPPE
Ga0208588_10041101	3300025479	Arctic Peat Soil	VIKVTPVKFPSLLRPMRERLLAPLTHPDQAERLLAETFRTLGSLCTRLADMVEAQRLTRAGYDRQGRFLERLD
Ga0207649_100190365	3300025920	Corn Rhizosphere	VKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRDQGRFLERLDRSSPSAHPDSGGGRPD
Ga0207644_100748112	3300025931	Switchgrass Rhizosphere	VIKVTGVKFPSLLRVRERFLAPLGQTDQAERLLVETFRTLSTLCTRLADMVETQRLTRAGYRDQGRFLERLDRGGRSSRPE
Ga0209048_101320041	3300027902	Freshwater Lake Sediment	VKFPSLLRPVRERLLGPLAHPDQAERLLAETFRTLGTLCARLADIVESQRLTRAGYHGQGRFLE
Ga0310888_101864231	3300031538	Soil	VIKVTGVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLGTLCTRLADMVEKERLTRAGYRDQGRF
Ga0318516_105951072	3300031543	Soil	KGRPVIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318534_100926652	3300031544	Soil	VIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318534_102416642	3300031544	Soil	MKFPSLLEPMRQRLAAQLAPADQAERLLAETFRTLGALCTRLADLVESQRLARAGYRDQGRFLERLDRPAPPPSDPGPGR
Ga0318528_103627801	3300031561	Soil	DPLSSGHAVRSLSRKGRPVIKVTSVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0310886_106876311	3300031562	Soil	VIKVTGVKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCTRLADRVESQRLTRAGYDRQDRYL
Ga0318573_102494952	3300031564	Soil	VIKVSGVKFPSLLRVRERFLTPLGQTDQAERLLVEAFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPRRND
Ga0318515_100812613	3300031572	Soil	VIKVAGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318515_103742092	3300031572	Soil	MDGDVIKVTSVKFPSLMRVRDRLLAPLEHQDEAERLLVETFRTLSSLCTRLADVVESQRLNRAGFRGQGRFLERLDRNAPPSKPD
Ga0318542_103171052	3300031668	Soil	VIKVTSVKFPSLLRVRDRFLAPLGQTEQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318560_100394321	3300031682	Soil	VSLKVRAMKFPSLLEPMRQRLAAQLAPADQAERLLAETFRTLGALCTRLADLVESQRLARAGYRDQGRFLERLDRPAPPPSDPGPGR
Ga0318496_108292741	3300031713	Soil	IKVAGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0310813_118079531	3300031716	Soil	VKFPSLLRVRERLLAPLGHTDQAERLLVETFRTLSTLCTRLADTVESQRLTRAGYRDQGRFLERLDRRPPSADPDPGGGRPD
Ga0307469_100192985	3300031720	Hardwood Forest Soil	MKFPSLLEPMRQRLAARLAPADQAERLLAETFRTLGVLCTRLANLVESQRLARAGYRDQGRFLERLDRPAPPPSDPGQSR
Ga0307469_103068271	3300031720	Hardwood Forest Soil	MRVRDRLLAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRDRSSSRPD
Ga0318493_100491973	3300031723	Soil	VKFPSILRPVRERLLAPLGHPDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRGQGRFLERLDPAAPPSKPE
Ga0318493_107160922	3300031723	Soil	VIKVTSVKFPSLLRVRDRFLAPLGQTEQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGR
Ga0318500_106924562	3300031724	Soil	VIKVTGVKFPSLLRVRERLMAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYRDQGRFLERLDRG
Ga0318492_105470232	3300031748	Soil	PVIKVTSVKFPSLLRVRDRFLAPLGQTEQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318494_106426621	3300031751	Soil	VIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLVVETFRTLSTLCSRLADLVESQRLNRAGYDRQDRFLERLDRGARGAGAPPARPE
Ga0318554_107011742	3300031765	Soil	IKVTSVKFPSLLRVRDRFLAPLGQTEQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318509_107553382	3300031768	Soil	VIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPP
Ga0318526_102917431	3300031769	Soil	MDGDVIKVTSVKFPSLMRVRDRLLAPLEHQDEAERLLVETFRTLSSLCTRLADVVESQRLNRAGFRGQGRFLERLD
Ga0318526_103295152	3300031769	Soil	GRPVIKVTSVKFPSLLRVRDRFLAPLGQTEQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318548_103037602	3300031793	Soil	VIKVTSVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318557_101348381	3300031795	Soil	VIKVTSVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPRRND
Ga0318550_102318652	3300031797	Soil	IKVAGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPRRND
Ga0318550_104211831	3300031797	Soil	EVSLKVRAMKFPSLLEPMRQRLAAQLAPADQAERLLAETFRTLGALCTRLADLVESQRLARAGYRDQGRFLERLDRPAPPPSDPGPGR
Ga0318565_104671052	3300031799	Soil	LSRKGRPVIKVAGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318564_100669311	3300031831	Soil	GWPAPEVSLKVRAMKFPSLLEPMRQRLAAQLAPADQAERLLAETFRTLGALCTRLADLVESQRLARAGYRDQGRFLERLDRPAPPPSDPGPGR
Ga0318517_101203121	3300031835	Soil	LKVRAMKFPSLLEPMRQRLAAQLAPADQAERLLAETFRTLGALCTRLADLVESQRLARAGYRDQGRFLERLDRPAPPPSDPGPGR
Ga0318495_103375652	3300031860	Soil	RKGRPVIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0306919_106924931	3300031879	Soil	LRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0306925_122335292	3300031890	Soil	RPVIKVAGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318520_101299411	3300031897	Soil	LMRVRDRLLAPLEHQDEAERLLVETFRTLSSLCTRLADVVESQRLNRAGFRGQGRFLERLDRNAPPSKPD
Ga0306923_119350291	3300031910	Soil	KVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0306923_120334101	3300031910	Soil	VIKVSRVKFPSLLRVRERFLTPLGQTDQAERLLVEAFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLD
Ga0306921_106097212	3300031912	Soil	VIKVAGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLER
Ga0306922_105353852	3300032001	Soil	VIKVAGVKFPSLLRVRDRFLAPLGQTEQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0306922_119377371	3300032001	Soil	GHAVRSLSRKGRAVIKVSRVKFPSLLRVRERLMAPLGQTDQAERLLVETFRTLSTLCTRLADMVETQRLTRAGYRDQGRFLERLDRRASPPRQD
Ga0318563_102676221	3300032009	Soil	VIKVSRVKFPSLLRVRERFLTPLGQTDQAERLLVEAFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRG
Ga0318569_105889881	3300032010	Soil	ESDPLSSGHAVRSLSRKGRPVIKVAGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0310911_101014971	3300032035	Soil	VIKVSRVKFPSLLRVRERFLTPLGQTDQAERLLVEAFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0318558_100179975	3300032044	Soil	PMAICVAPFRGMDGDVIKVTSVKFPSLMRVRDRLLAPLEHQDEAERLLVETFRTLSSLCTRLADVVESQRLNRAGFRGQGRFLERLDRNAPPSKPD
Ga0318506_102448892	3300032052	Soil	VIKVAGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAP
Ga0318514_104767901	3300032066	Soil	VIKVAGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPRRND
Ga0318524_107850132	3300032067	Soil	KVSRVKFPSLLRVRERFLTPLGQTDQAERLLVEAFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRAAPPRRND
Ga0306924_113677002	3300032076	Soil	VTSVKFPSLMRVRDRLLAPLEHQDEAERLLVETFRTLSSLCTRLADVVESQRLNRAGFRGQGRFLERLDRNAPPSKPD
Ga0306924_124113181	3300032076	Soil	GRPVIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPPRQD
Ga0307472_1004084482	3300032205	Hardwood Forest Soil	MIKVTRVKFPSLMRVRDRLLAPLGQTDQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYDRQGRFLERLDRGAAAPPPRPE
Ga0306920_1022377822	3300032261	Soil	VIKVSRVKFPSLLRVRERLMAPLGQTDQAERLLVETFRTLSTLCTRLADMVETQRLTRAGYRDQGRFLERLDRRASPPRQD
Ga0335085_102521902	3300032770	Soil	MLKVTGVKFPSLLRVRQRLLAPLGQTDQAERLLVETFRTLSTLCTRMADMVESQRLTRAGYRDQGRFLERLDRGGKPRPD
Ga0335085_103111881	3300032770	Soil	VIKVGAVKFPSLLRPVRERLLAPLGHPEQAERLLAETFRTLGTLCTRLADLVESQRLQRAGYHAQDRFLERLDRRAPPPGSD
Ga0335082_100229306	3300032782	Soil	VKFPSILRPVRERLLAPLGRPDQAERLLVETFRTLGSLCTRLADLVEAQRLTRAGYRGQGQFLERLDRGAPPSKPG
Ga0335082_100509207	3300032782	Soil	IKVRTVRFPSLLRPVRERLLAPLGHADQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYQGQGRFLERLDRAAPPSKPE
Ga0335082_102130322	3300032782	Soil	VIKVGAVKFPSLLRVRERLLAPLAHPDQAERLLAETFRTLGTLCTRLADMVESQRLTRAGYHGQGRFLERLDRGAHPSKPD
Ga0335069_103033793	3300032893	Soil	VKFPSLLRPVRERLLAPLGHPDQAERLLVETFRTLSTLCTRLADAVEQQRLTRAGYRGQDRFLERLDPGARPPDRG
Ga0335084_1000123214	3300033004	Soil	VIKVRTVRFPSLLRPVRERLLAPLGHADQAERLLVETFRTLGTLCTRLADMVESQRLTRAGYQGQGRFLERLDRAAPPSKPE
Ga0318519_108232212	3300033290	Soil	RKGRPVIKVTGVKFPSLLRVRDRFLAPLGQTDQAERLLVETFRTLSTLCNRLADMVESQRLTRAGYRDQGRFLERLDRGAPPRRND
Ga0310810_104461881	3300033412	Soil	VKFPSLLRVRERLLAPLGQTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYRDQGRFLERLDRSSPSAHPDSGGGR
Ga0326726_101436404	3300033433	Peat Soil	VIKVSRVKFPSLLRVRDRLLAPLEHQDQAERLLVETFRTLSSLCTRLADMVESQRLNRAGYQGQGRFLERLDRAAAPPPKPE
Ga0326726_101734963	3300033433	Peat Soil	MKFPSLLEPMRQRLAAQLAPADQAERLLAETFRTLGALCTRLADLVESQRLARAGYRDQGRFLERLDRPAPPPPGPTQSG
Ga0316620_101761802	3300033480	Soil	VIKVGAVKFPSLLRVRERLLAPLAHPDQAERLLAETFRTLGTLCTRLADMVESQRLTRAGYHEQGRFLERLDRGAHPSKPD
Ga0247829_105083142	3300033550	Soil	VKFPSLLRVRQRLLAPLGHTDQAERLLVETFRTLSTLCTRLADMVESQRLTRAGYHDQGRFLERLDRPTRSPHPDHDGSQPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059465

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences