Metagenome Family F059459

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059459
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	46 residues
Representative Sequence	MALTNSLAGRNLGMILLGLWLILTGLLPLLNIRLSSTVTTGLAVLGIAA
Number of Associated Samples	120
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.01 %
% of genes near scaffold ends (potentially truncated)	83.58 %
% of genes from short scaffolds (< 2000 bps)	91.04 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.821 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.164 % of family members)
Environment Ontology (ENVO)	Unclassified (43.284 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.687 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.74% β-sheet: 0.00% Coil/Unstructured: 40.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF07676	PD40	10.45
PF09285	Elong-fact-P_C	4.48
PF00069	Pkinase	3.73
PF03061	4HBT	2.99
PF07969	Amidohydro_3	2.24
PF07690	MFS_1	2.24
PF00326	Peptidase_S9	2.24
PF13432	TPR_16	1.49
PF13174	TPR_6	1.49
PF11008	DUF2846	1.49
PF09579	Spore_YtfJ	1.49
PF07583	PSCyt2	0.75
PF00884	Sulfatase	0.75
PF13245	AAA_19	0.75
PF00254	FKBP_C	0.75
PF02075	RuvC	0.75
PF03938	OmpH	0.75
PF14534	DUF4440	0.75
PF00930	DPPIV_N	0.75
PF01695	IstB_IS21	0.75
PF13414	TPR_11	0.75
PF04264	YceI	0.75
PF05163	DinB	0.75
PF00012	HSP70	0.75
PF13360	PQQ_2	0.75
PF06831	H2TH	0.75
PF02910	Succ_DH_flav_C	0.75
PF00072	Response_reg	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	14.93
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.75
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	0.75
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	0.75
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.75
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.75
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.75
COG2825	Periplasmic chaperone for outer membrane proteins, Skp family	Cell wall/membrane/envelope biogenesis [M]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.82 %
Unclassified	root	N/A	14.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.82 %
Unclassified	root	N/A	14.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.82 %
Unclassified	root	N/A	14.18 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.25 %
Unclassified	root	N/A	14.18 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.18 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	11.19 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.24 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.73 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.99 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.49 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.75 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.73 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.24 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.24 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.75 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.75 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.75 %
unclassified Planctomycetia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.24 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.24 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.75 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.75 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.75 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.75 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples	0.75 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.24 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.24 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.75 %
Actinomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces	0.75 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	0.75 %
uncultured Desulfobacterales bacterium HF0200_07G10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples → uncultured Desulfobacterales bacterium HF0200_07G10	0.75 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.75 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.24 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.24 %
unclassified Actinomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces	0.75 %
Zavarzinella formosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	0.75 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.75 %
uncultured Desulfobacterales bacterium HF0200_07G10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples → uncultured Desulfobacterales bacterium HF0200_07G10	0.75 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.75 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.24 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.24 %
Actinomyces sp. oral taxon 170	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp. oral taxon 170	0.75 %
Zavarzinella formosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	0.75 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.75 %
uncultured Desulfobacterales bacterium HF0200_07G10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples → uncultured Desulfobacterales bacterium HF0200_07G10	0.75 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.75 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100365145	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	831	Open in IMG/M
3300000532\|CNAas_1007011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300000550\|F24TB_12273307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	537	Open in IMG/M
3300001432\|JGI24034J14986_101331	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300002562\|JGI25382J37095_10185576	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300002907\|JGI25613J43889_10156586	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300004114\|Ga0062593_100086058	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300004156\|Ga0062589_101202708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp. oral taxon 170	725	Open in IMG/M
3300005167\|Ga0066672_10535986	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300005178\|Ga0066688_10160776	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300005294\|Ga0065705_10197501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1430	Open in IMG/M
3300005295\|Ga0065707_11006017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	538	Open in IMG/M
3300005332\|Ga0066388_108547536	Not Available	509	Open in IMG/M
3300005337\|Ga0070682_100945113	Not Available	711	Open in IMG/M
3300005353\|Ga0070669_101841080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	528	Open in IMG/M
3300005367\|Ga0070667_101607515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	611	Open in IMG/M
3300005438\|Ga0070701_11161235	Not Available	546	Open in IMG/M
3300005444\|Ga0070694_101946433	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005445\|Ga0070708_100154648	All Organisms → cellular organisms → Bacteria → Proteobacteria	2134	Open in IMG/M
3300005454\|Ga0066687_10801035	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005466\|Ga0070685_11536349	Not Available	514	Open in IMG/M
3300005467\|Ga0070706_101268590	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300005468\|Ga0070707_100336956	All Organisms → cellular organisms → Bacteria → Acidobacteria	1465	Open in IMG/M
3300005471\|Ga0070698_101119632	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005536\|Ga0070697_100279453	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300005543\|Ga0070672_101292393	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005544\|Ga0070686_100981730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	692	Open in IMG/M
3300005545\|Ga0070695_101702440	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300005546\|Ga0070696_100508380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	959	Open in IMG/M
3300005547\|Ga0070693_100541565	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300005549\|Ga0070704_100262952	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300005555\|Ga0066692_10087485	All Organisms → cellular organisms → Bacteria → Acidobacteria	1823	Open in IMG/M
3300005563\|Ga0068855_100455607	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300005563\|Ga0068855_101554090	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005574\|Ga0066694_10523335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300005577\|Ga0068857_101432133	Not Available	672	Open in IMG/M
3300005598\|Ga0066706_11258291	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005616\|Ga0068852_102407072	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300005840\|Ga0068870_11084027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	575	Open in IMG/M
3300006031\|Ga0066651_10788900	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300006032\|Ga0066696_10773588	Not Available	614	Open in IMG/M
3300006791\|Ga0066653_10523871	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300006796\|Ga0066665_11387217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	543	Open in IMG/M
3300006881\|Ga0068865_101625559	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300007004\|Ga0079218_10001161	All Organisms → cellular organisms → Bacteria	9243	Open in IMG/M
3300007076\|Ga0075435_100986547	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300009012\|Ga0066710_101747629	Not Available	943	Open in IMG/M
3300009092\|Ga0105250_10613275	Not Available	505	Open in IMG/M
3300009093\|Ga0105240_10041348	All Organisms → cellular organisms → Bacteria	5884	Open in IMG/M
3300009101\|Ga0105247_11585338	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300009147\|Ga0114129_12566103	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300009147\|Ga0114129_12840537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	574	Open in IMG/M
3300009162\|Ga0075423_13055222	Not Available	513	Open in IMG/M
3300009176\|Ga0105242_11893108	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300009177\|Ga0105248_10480057	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300010159\|Ga0099796_10098507	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300010303\|Ga0134082_10426525	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300010320\|Ga0134109_10427550	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300010325\|Ga0134064_10229154	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300010399\|Ga0134127_10621059	All Organisms → cellular organisms → Bacteria → Acidobacteria	1112	Open in IMG/M
3300010399\|Ga0134127_12124301	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300010400\|Ga0134122_12687299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	549	Open in IMG/M
3300011003\|Ga0138514_100103247	Not Available	619	Open in IMG/M
3300011271\|Ga0137393_10796903	Not Available	808	Open in IMG/M
3300012043\|Ga0136631_10411386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	550	Open in IMG/M
3300012096\|Ga0137389_10868292	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300012189\|Ga0137388_10767762	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300012189\|Ga0137388_10956007	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300012201\|Ga0137365_10933800	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300012203\|Ga0137399_10848939	Not Available	769	Open in IMG/M
3300012209\|Ga0137379_10064882	All Organisms → cellular organisms → Bacteria → Acidobacteria	3514	Open in IMG/M
3300012209\|Ga0137379_10433936	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223	Open in IMG/M
3300012285\|Ga0137370_10766615	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300012360\|Ga0137375_10113568	All Organisms → cellular organisms → Bacteria	2724	Open in IMG/M
3300012361\|Ga0137360_10119608	Not Available	2046	Open in IMG/M
3300012532\|Ga0137373_10044455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4181	Open in IMG/M
3300012685\|Ga0137397_11125938	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300012922\|Ga0137394_10842564	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	767	Open in IMG/M
3300012923\|Ga0137359_10178153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1898	Open in IMG/M
3300012923\|Ga0137359_10359003	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300012927\|Ga0137416_11956865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300012929\|Ga0137404_10103082	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300012929\|Ga0137404_10452350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1140	Open in IMG/M
3300012948\|Ga0126375_10773233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples → uncultured Desulfobacterales bacterium HF0200_07G10	757	Open in IMG/M
3300012955\|Ga0164298_11623572	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300012985\|Ga0164308_11196353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	686	Open in IMG/M
3300013307\|Ga0157372_10215629	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300013308\|Ga0157375_11298306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	856	Open in IMG/M
3300013760\|Ga0120188_1007892	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300014487\|Ga0182000_10121559	Not Available	907	Open in IMG/M
3300015245\|Ga0137409_10454252	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300015371\|Ga0132258_13681167	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300017657\|Ga0134074_1328638	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300017789\|Ga0136617_10729053	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300018028\|Ga0184608_10432670	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300018028\|Ga0184608_10506114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	516	Open in IMG/M
3300018075\|Ga0184632_10102144	All Organisms → cellular organisms → Bacteria → Acidobacteria	1257	Open in IMG/M
3300018429\|Ga0190272_11087591	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300018433\|Ga0066667_11824938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	551	Open in IMG/M
3300018466\|Ga0190268_11009567	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300018469\|Ga0190270_12002539	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300018469\|Ga0190270_12754330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	554	Open in IMG/M
3300018476\|Ga0190274_11493573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300018482\|Ga0066669_11886224	Not Available	555	Open in IMG/M
3300020001\|Ga0193731_1130368	Not Available	632	Open in IMG/M
3300020022\|Ga0193733_1193238	Not Available	527	Open in IMG/M
3300025900\|Ga0207710_10536613	Not Available	609	Open in IMG/M
3300025907\|Ga0207645_10209270	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300025910\|Ga0207684_10152391	All Organisms → cellular organisms → Bacteria → Acidobacteria	1989	Open in IMG/M
3300025910\|Ga0207684_10788839	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300025910\|Ga0207684_11404875	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300025913\|Ga0207695_10045678	All Organisms → cellular organisms → Bacteria	4648	Open in IMG/M
3300025925\|Ga0207650_10773817	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300025926\|Ga0207659_10705703	All Organisms → cellular organisms → Bacteria → Acidobacteria	864	Open in IMG/M
3300025934\|Ga0207686_11110033	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300025938\|Ga0207704_10624782	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300025949\|Ga0207667_10767833	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300025960\|Ga0207651_11203961	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300026023\|Ga0207677_10956121	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	775	Open in IMG/M
3300026088\|Ga0207641_12144852	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300026095\|Ga0207676_11501925	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300026095\|Ga0207676_12203388	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300026318\|Ga0209471_1231372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300027691\|Ga0209485_1125860	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300027748\|Ga0209689_1173719	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300027875\|Ga0209283_10501349	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300027880\|Ga0209481_10490714	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300027882\|Ga0209590_10577105	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300027886\|Ga0209486_10510020	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300028792\|Ga0307504_10007756	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300028878\|Ga0307278_10363357	Not Available	638	Open in IMG/M
3300032180\|Ga0307471_102196987	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300032180\|Ga0307471_102338549	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300032180\|Ga0307471_103094371	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.39%
Host-Associated	Host-Associated	27.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.66%
Plants	Host-Associated → Plants	27.61%
Aquatic	Environmental → Aquatic	3.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.19%
Sediment	Environmental → Aquatic → Sediment	2.24%
Freshwater	Environmental → Aquatic → Freshwater	1.49%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.73%
Loam	Environmental → Terrestrial → Soil → Loam	14.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.24%
Ice	Environmental → Aquatic → Freshwater → Ice	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.49%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.24%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.49%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.24%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000532	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled	Host-Associated	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001432	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003651452	3300000364	Soil	MALTSNLAGRNLGLILLGLWLILTGLLPLLNIKISSTVTT
CNAas_10070113	3300000532	Quercus Rhizosphere	MALTNTLAGRNLGMILLGVWLILTGLLPLANIRISPT
F24TB_122733072	3300000550	Soil	MNLTRSWAGRNXXXXXXXXXXXXXXLLPLLNMRLSPNVTIGLAVLGIVAGILILLNR*
JGI24034J14986_1013311	3300001432	Corn, Switchgrass And Miscanthus Rhizosphere	MALTNSLAGRNLGMLLLGLWLILTGLLPLLNMKLSSTVTTGLAVLGIVAGI
JGI25382J37095_101855762	3300002562	Grasslands Soil	MALTXXLAGKNLGMILLGLWLILTGLLPMLNIKVSSTWH*
JGI25613J43889_101565861	3300002907	Grasslands Soil	MSLTSAAGRNLGMLLLGLWLILTGLLPLLNFKLSSTVATGLAV
Ga0062593_1000860581	3300004114	Soil	VAITNTLAGRNLGMILLAIWLILTGLLPLLNIRVSTTVNTVLAVIA
Ga0062589_1012027081	3300004156	Soil	MALTSSLAGRNLGMILLGLWLILTGLLPLANVRVSSTVTTGLAVLGIVAGILILLKR*
Ga0066672_105359862	3300005167	Soil	MALTGGLAGRNLGMILLGLWLILTGLLPLLNIRISSTVTTGLAVL
Ga0066688_101607761	3300005178	Soil	KEERMALTSSLAGRNLGMILLGLWLILTGLLPLLNIRVSSTVTTGLGVLGIVAGISILLRR*
Ga0065705_101975012	3300005294	Switchgrass Rhizosphere	MALTNSLAGRNLGMILLGLWLILTGLLPLLSIRVSATVTTGLAVLAIAA
Ga0065707_110060172	3300005295	Switchgrass Rhizosphere	MALTNSLAGRNFGMILLGLWLILTGLLPLLSIRVSATVTTGLAVLAIAAG
Ga0066388_1085475361	3300005332	Tropical Forest Soil	MALTSGLAGKNFGMLLLGIWLILTGLLPLLNVRISATFTT
Ga0070682_1009451131	3300005337	Corn Rhizosphere	LAITNTLAGRNLGMILLAVWLILTGLLPLLSVRISPTVNT
Ga0070669_1018410802	3300005353	Switchgrass Rhizosphere	MALTNTLAGRNIGMLLLGLWLILTGLLPLLNIKLSSTMTTGLAVLAII
Ga0070667_1016075151	3300005367	Switchgrass Rhizosphere	LSKTKDPRPKAKDQIQKGEHMALTSSLAGRNLGMILLGLWLILTGLLPLANVRVSSTVTTGLAVLGIVAGILILLKR*
Ga0070701_111612351	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAFTGGLGSRKLGMLLLGIWLILTGLLPLLSVRLSPTFNTVLAV
Ga0070694_1019464332	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MALTNTLAGRNIGMLLLGLWLILTGLLPLLNIKLSSTMTTGLAVLAIIAGI
Ga0070708_1001546482	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTLTSGLAGRNPGMLLLGLWLILTGLLPLLNIKVSSTVTTGLAVLGIVAGILIVIRR*
Ga0066687_108010352	3300005454	Soil	MALTNSLAGRNLGMILLGLWLILTGLLPLLSIRVSSTVTT
Ga0070685_115363491	3300005466	Switchgrass Rhizosphere	MTLTSSLAGRNLGMLLLGLWLILTGLLPLLSIRTSPTVTTGLAVLG
Ga0070706_1012685902	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAVTNSLAGRNLGMLLLGLWLILTGLLPLLSIRVSPTVTTG
Ga0070707_1003369562	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MALTSSLAGRNLGMILLGLWLILTGLLPLLNMRLSSTITTGL
Ga0070698_1011196321	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MALTNSFAGRNFGMILLGLWLILTGLLPLLNMKLSSTVTTGL
Ga0070697_1002794532	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MALTNSLAGRNLGMILLGLWLILTGLLPLFNMRVSTTVTTGLAVLGIIAGILILLRR*
Ga0070672_1012923931	3300005543	Miscanthus Rhizosphere	MGITNTLAGRNLGMALLAIWLILTGLLPLLSIRVSTTV
Ga0070686_1009817302	3300005544	Switchgrass Rhizosphere	KDQIQKGEHMALTSSLAGRNLGMILLGLWLILTGLLPLANVRVSSTVTTGLAVLGIVAGILILLKR*
Ga0070695_1017024401	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MALTNSLAGRNLGLLLLGIWLILNGLLPLLNMRLSSTVTTGLGV
Ga0070696_1005083801	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MALTSSLAGRNLGMILLGLWLILTGLLPLLSIRVSPTVTTGLAVLG
Ga0070693_1005415651	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LAITNTLAGRNLGMILLAIWLILTGLLPLLSIRVSTTVNTVLA
Ga0070704_1002629523	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTRGWAGRNLGMTLLGLWLIITGLLPLLNMRLSANVTIGLAVLGIVAGILILLRR*
Ga0066692_100874852	3300005555	Soil	MALTGGLAGRNLGMILLGLWLILTGLLPLVNIRISSTV
Ga0068855_1004556072	3300005563	Corn Rhizosphere	MALTNSLAGRNLGMILLALWLIITGFLQILSVRVSETAMMALAVLAIAAGLLILLRR*
Ga0068855_1015540901	3300005563	Corn Rhizosphere	MALTNSLAGRNFGMILLAIWLILTGLLPLLNVRISSTVSMALAILAIA
Ga0066694_105233352	3300005574	Soil	MALTGTLAGRNLGLTLLGLWLILTGLLPLLNIKVS
Ga0068857_1014321332	3300005577	Corn Rhizosphere	MAIGLEGRNIGMILLGLWLILTGLLPLLKVSVSSTVATGLGVL
Ga0066706_112582911	3300005598	Soil	MVITNSLAGRNLGMLLLGLWLILTGLLPLLNMRLSSAVTTGLSILGIVAGILI
Ga0068852_1024070722	3300005616	Corn Rhizosphere	MALTNNLAGRNLGMLLLGLWLILPGILPLLNVKVSATVTTGLAILGIVAGILILLRR*
Ga0068870_110840271	3300005840	Miscanthus Rhizosphere	MALTNSLAGRNFGMVLLGVWLILTGLLPLLSVRISPTFTT
Ga0066651_107889001	3300006031	Soil	MALTSGLIGRNLGMLLLGLWLILTGLLPLLSIKVSST
Ga0066696_107735883	3300006032	Soil	MALTSFAGRSLGMVLLGLWLILTGLLPLLNMKISSTVTTGLAILGIAAG
Ga0066653_105238712	3300006791	Soil	MALTSSLAGRNLGMTLLGLWLILTGLLPFLNIKVSSTVTTGLAVLGIV
Ga0066665_113872171	3300006796	Soil	MALTNSLIGRNLGMILLGLWLILTGLLPLLSIRVSSTVTTGLA
Ga0068865_1016255592	3300006881	Miscanthus Rhizosphere	MALTSSLAGRNLGMILLGLWLILTGLLPLANVRVSSTVTTGLAVLGIVACILILLKR*
Ga0079218_100011618	3300007004	Agricultural Soil	MALTDSLAGRNLGMILLGLWLILTGLLPLLDVRVSATV
Ga0075435_1009865471	3300007076	Populus Rhizosphere	MALTSFAGRSLGMLLLGLWLILTGLLPLLNMKLSSTVNTGLAVLGIIAGILIL
Ga0066710_1017476292	3300009012	Grasslands Soil	MALTNSLAGRNLGLLLLGLWLILNGLLPLLNMRLSSTVTTGLAVLGIVAVVRQLGQLGMRHGP
Ga0105250_106132751	3300009092	Switchgrass Rhizosphere	MALTSTLAGKNLGMVLLGIWLILTGLLPLLSVRVS
Ga0105240_100413487	3300009093	Corn Rhizosphere	MALTNSLAGRNLGMILLALWLIINGFLQILSVRVSATAMMALAVLAIAAGLLILLRR*
Ga0105247_115853382	3300009101	Switchgrass Rhizosphere	LAITNTLAGKNLGMILLAIWLILTGLLPLLNIRVSTTVN
Ga0114129_125661032	3300009147	Populus Rhizosphere	LALTNTLAGRNLGMILLAVWLILTRLLPLLNVRVSTTVTTVLAVLAIA
Ga0114129_128405372	3300009147	Populus Rhizosphere	MALTNSLAGRNLGMLLLGLWLILTGLLLLLNMKLSSEV
Ga0075423_130552222	3300009162	Populus Rhizosphere	MALTSSLAGRNLGMLLLGIWLILTGLLPLLNMKLSSTVTTGLAVLGIVAG
Ga0105242_118931082	3300009176	Miscanthus Rhizosphere	MALTSSLAGRNLGMILLGLWLILTGLLPLLNMRISS
Ga0105248_104800571	3300009177	Switchgrass Rhizosphere	MALTDSLAGRNLGMILLGLWLIITGLLPLLNIRVSSTVTTGLAIL
Ga0099796_100985072	3300010159	Vadose Zone Soil	MALTNSLAGRNLGMTLLGLWLILTGLLPFLNIKVSSTVTTGLAVLGIVAGILILLRR*
Ga0134082_104265251	3300010303	Grasslands Soil	MALTSGLAGKNLGMILLGLWLILTGLLPMLNIKVSSTVTT
Ga0134109_104275502	3300010320	Grasslands Soil	MALTSCLAGRNLGLLLLGLWLILTGLLPLLNIKVSS
Ga0134064_102291541	3300010325	Grasslands Soil	MALTSGLAGKNLGMILLGLWLILTGLLPLLNIKVSSTVTTG
Ga0134127_106210592	3300010399	Terrestrial Soil	MALTSSLAGRNLGMILLGVWLILTGLLPLLSIRVSPTVT
Ga0134127_121243011	3300010399	Terrestrial Soil	MTLSSFAGKNLGMILLGPWLILTCLLPLLNIKLSSTVTTGLAVLGIIAGIL
Ga0134122_126872992	3300010400	Terrestrial Soil	MALTNSLAGRNIGMLLLGLWLILTGLLPLLNIKLSS
Ga0138514_1001032471	3300011003	Soil	MALTNSLAGRNLGLLLLGVWLILTGLLPLLNMKLSSTVTTGLAVLG
Ga0137393_107969031	3300011271	Vadose Zone Soil	MALTNSLAGRNLGLTLLGLLLILTGILPFLNMRVSATVTTGLAVLGIVAGILILLRR*
Ga0136631_104113861	3300012043	Polar Desert Sand	MALTNGFANRNLGMILLGLWLILTGLLPFLDMKLSPMVTTGLAVLGIVAGIL
Ga0137389_108682922	3300012096	Vadose Zone Soil	MALTNSLAGRNLGMTLLGLWLILTGLLPFLNMRVSSTVYTALAALGIVAGILI
Ga0137388_107677622	3300012189	Vadose Zone Soil	MALTSLAGRNLGMLLLGLWLILTGLLPLLNIKLSSTV
Ga0137388_109560071	3300012189	Vadose Zone Soil	MRFAESFVGRNVGLLLLGIWLILTGLLPLLNVRLSSTMLTALAVLAIAAGIL
Ga0137365_109338002	3300012201	Vadose Zone Soil	MTLINSFAGRNLGMLLLGLWLILTGLLPLLSVRPSS
Ga0137399_108489391	3300012203	Vadose Zone Soil	MALTTSLAGRNLGLTLLGLWLILTGLLPFLNIRISSTVTTGLAVLAVVAGILILLRR*
Ga0137379_100648821	3300012209	Vadose Zone Soil	MALTSSLAGRNLGLTLLGVWLILTGLLPLLNIKVSSTVTTGLAV
Ga0137379_104339361	3300012209	Vadose Zone Soil	MALTSSLAGRNLGLTLLGVWLILTGLLPLLNIKVSSTVTTGLAVLGIAAGVLI
Ga0137370_107666152	3300012285	Vadose Zone Soil	MASILAGRNLGMILLGLWLILTGLLPLLSVRLSST
Ga0137375_101135684	3300012360	Vadose Zone Soil	MALTNSLAGRNLGMLLLGIWLILTGLLPLLNMRLSATVT
Ga0137360_101196082	3300012361	Vadose Zone Soil	MALISSFAGRNLGMLLLGLWLILTGLLPLLSVRPSSTVTTGLAVLG
Ga0137373_100444551	3300012532	Vadose Zone Soil	MKMTSLGGRNLGMLLLGIWLILTGLLPLLSIRVSSTVTMV
Ga0137397_111259381	3300012685	Vadose Zone Soil	MRFAESFVGRNVGLLLLGIWLILTGLLPLLNVRLSSTMLTALAVLAIVAGI
Ga0137394_108425643	3300012922	Vadose Zone Soil	MALTNSLAGRNLGMILLGLWLILTGLLPLLNMRLS
Ga0137359_101781533	3300012923	Vadose Zone Soil	MALTSFAGRNLGMLLLGLWLILTGLLPLLNMRLSSTVTTGLAVLG
Ga0137359_103590032	3300012923	Vadose Zone Soil	MALTSSFAGRNLGMLLLGLWLILTGLLPLLNMRLSSTVTTGLAVLG
Ga0137416_119568652	3300012927	Vadose Zone Soil	MALTSSLAGRNLGMTLLGLWLILTGLLPLLNIKVSSTVTTGLAVLGIAASILILLRR*
Ga0137404_101030823	3300012929	Vadose Zone Soil	MALTNSLAGRNFGMILLGLWLILTGLLPLLNMRVSTTVTTGLAVLGIIAGILILLRR*
Ga0137404_104523501	3300012929	Vadose Zone Soil	MALTNSLAGRNLGMLLLGLWLILTGLLPFLNMRPTSTVITGLAVLGIIAGVLILLKR*
Ga0126375_107732331	3300012948	Tropical Forest Soil	MALTNGLAGKNLGMLLLGIWLILTGLLPLLNVRISATF
Ga0164298_116235721	3300012955	Soil	MALTNNLAGRNFGMILLGLWLILTGLLPLLSIRVSSTVTTGLAVL
Ga0164308_111963531	3300012985	Soil	MSLTSTLKGRSLGMILLALWLILTGLLPLINTHLSGNVAM
Ga0157372_102156294	3300013307	Corn Rhizosphere	LAITNALAGRNLGMVLLAVWLILTGLLPLLSIRVSTTVNTVLA
Ga0157375_112983061	3300013308	Miscanthus Rhizosphere	MAIGLEGRNIGMILLGLWLILTGLLPLLKVSVSSTVATGLGVLA
Ga0120188_10078923	3300013760	Terrestrial	MAVTNSLAGRNLGMILLGIWLILTGLLPLLNVRLS
Ga0182000_101215592	3300014487	Soil	MLPGDAKERGADMALTTGFAGRSWGMILLGLWLIITGLLPLLSIRVSSTVSTAISVLAIAAGLLILLRRY*
Ga0137409_104542521	3300015245	Vadose Zone Soil	MALTSSLAGRNLGMILLGLWLILTGLLPLLNMKMSS
Ga0132258_136811671	3300015371	Arabidopsis Rhizosphere	MGITNTLAGRNLGMALLAIWLILTGLLPLLSIRVST
Ga0134074_13286381	3300017657	Grasslands Soil	MALTSGLIGRNLGMLLLGLWLILTGLLPLLSIKVSSTVTTA
Ga0136617_107290531	3300017789	Polar Desert Sand	MAVTNSLAGRNLGMLLLGLWLILTGLLPLLNMKVSSAVMTGLA
Ga0184608_104326701	3300018028	Groundwater Sediment	MSLTSSVGKNLGMILLGLWLILTGLLPLLNIKVSSTV
Ga0184608_105061141	3300018028	Groundwater Sediment	MALTNSLAGRNLGMILLAIWLILTGLLPLLNVRISPTVSM
Ga0184632_101021443	3300018075	Groundwater Sediment	MKLTDSLGSRNLGMLLLGIWLILTGLLPLINMRISPTVT
Ga0190272_110875911	3300018429	Soil	MAVTDGFAGRSLGMILLAIWLILTGLLPLLNVKLSPTMTMGLAILAIAAG
Ga0066667_118249381	3300018433	Grasslands Soil	MALTSSLAGRNLGMILLGLWLILTGLLPLLNMRVSSTVATGLAVLAIVAG
Ga0190268_110095671	3300018466	Soil	MAVTDGFAGRSFGMILLAIWLIVTGLLPLLNVKLSTNVTMGLAILAIAA
Ga0190270_120025391	3300018469	Soil	MALTSSLAGRNLGMILLGVWLILTGLLPLANMRLSP
Ga0190270_127543301	3300018469	Soil	MAITNSLAGRNLGMILLGLWLILTGLLPLLSIRVSSTVTTGLAVLGIAAGL
Ga0190274_114935731	3300018476	Soil	MAITNGLAGRNLGMLLLGLWLILTGLLPLLNVRVSTAVTTGLAVLGIVD
Ga0066669_118862241	3300018482	Grasslands Soil	MALTNSLAGRNLGLLLLGLWLILNGLLPLLNMRLSSTVTTGLAVLGIVAGILILLRR
Ga0193731_11303681	3300020001	Soil	MGLTNNLAGRNLGMLLLGLWLILTGLLPLLNMKLSATVTTGLAVLGIVA
Ga0193733_11932381	3300020022	Soil	MALTSFAGRSFGMLLLGLWLILTGLLPLLSIKVSSTVTTGLAVLAIVAG
Ga0207710_105366132	3300025900	Switchgrass Rhizosphere	VAITNTLAGRNLGMILLAIWLILTGLLPLLSIRVSPTVNTVLAVLAIA
Ga0207645_102092701	3300025907	Miscanthus Rhizosphere	MALTSSLAGRNLGMILLGLWLILTGLLPLLNMRISSTVTTGLAILGI
Ga0207684_101523911	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRFAGSFVGRNVGLLLLGIWLILTGLLPLLNVRLSSTMLTALAVLAIVA
Ga0207684_107888392	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MALTSLAGRNLGMILLGLWLILTGLLPLLNIKLSSTVTTGLAVLGIAAGI
Ga0207684_114048751	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MALTSLAGRNLGMLLLGLWLILYNLLPLLNIKLSS
Ga0207695_100456782	3300025913	Corn Rhizosphere	MALTNSLAGRNLGMILLALWLIINGFLQILSVRVSATAMMALAVLAIAAGLLILLRR
Ga0207650_107738171	3300025925	Switchgrass Rhizosphere	MALTNSLAGRNLGMILLALWLIITGFLQILDVRVSATAMMALAIL
Ga0207659_107057031	3300025926	Miscanthus Rhizosphere	MAISNTLAGRNLGMILLAIWLILTGLLPLLSIRVSTTVTTVLAIL
Ga0207686_111100332	3300025934	Miscanthus Rhizosphere	MALTNNLAGRNFGVILLGLWLILTGLLPLLNIRVSSTV
Ga0207704_106247822	3300025938	Miscanthus Rhizosphere	MALTNSLAGRNLGMILLGVWLILTGLLPLLSVRISPTVTTVL
Ga0207667_107678332	3300025949	Corn Rhizosphere	MALTNSLAGRNLGMILLALWLIITGFLQILSVRVSETAMMALAVLAIAAGLLILLRR
Ga0207651_112039612	3300025960	Switchgrass Rhizosphere	MALTNTLAGRNIGMLLLGLWLILTGLLPLLNIKLSSTVTTGL
Ga0207677_109561211	3300026023	Miscanthus Rhizosphere	MPLTNNLAGRNLGMLLLGLWLILTGLLPLLSIRVSSTVTMGLAVLGIVA
Ga0207641_121448521	3300026088	Switchgrass Rhizosphere	MALTDGLAGRNLGMILLGLWLILTGLLPLLNIKISSTVTT
Ga0207676_115019252	3300026095	Switchgrass Rhizosphere	MALTNSLAGRNLGMILLGLWLILTGLLPLLNIRLSSTVTTGLAVLGIAA
Ga0207676_122033881	3300026095	Switchgrass Rhizosphere	VAITNTLASRSLGMILLAIWLILTGLLPLLNVRISATVNTVLAVIAIA
Ga0209471_12313722	3300026318	Soil	MAVTSTLAGRNLGMLLLGLWLILTGLLPLLSIRISSTVTTALAVLGIVAGIL
Ga0209485_11258601	3300027691	Agricultural Soil	MAVTDGFAGRNLGMILLAIWLILTGLLPLLNVKLSPTMTT
Ga0209689_11737192	3300027748	Soil	MALTGGLAGRNLGMILLGLWLILTGLLPLVNIRISSTVTTGLAVLGIAAG
Ga0209283_105013492	3300027875	Vadose Zone Soil	MALTSGLAGRNLGMLLLGVWLILTGLLPLLNMRLSSTVTTGLAVLGIVAGIL
Ga0209481_104907142	3300027880	Populus Rhizosphere	MALTNSVAGRNLGMLLLGLWLILTGLLPLLNIKVSSTVT
Ga0209590_105771052	3300027882	Vadose Zone Soil	MALTSSLAGRNLGMILLGLWLILTGLLPLLSIRVSTTVTTGLAVLGIV
Ga0209486_105100203	3300027886	Agricultural Soil	MAVTNSLAGRNLGMILLGIWLILTGLLPLLNVRLSSTVNMGLAVLAIAA
Ga0307504_100077563	3300028792	Soil	MAFTKSLAGRNFGMILLGLWLILTGLLPLLSMKVSTTVTTGLAVLGIIAGILILLRR
Ga0307278_103633571	3300028878	Soil	MALTNSLAGRNLGMLLLGLWLILNGLLPLLNMKLSPTV
Ga0307471_1021969872	3300032180	Hardwood Forest Soil	MKLTDGLGNRNLGMLLLGIWLILTGLLPLVNMRVSPAVSTGL
Ga0307471_1023385492	3300032180	Hardwood Forest Soil	MKLTSSLAGRSVGMLLLGIWLILTGLLPLLNMRFSATVGTVLAVIAVVA
Ga0307471_1030943712	3300032180	Hardwood Forest Soil	MKLTNSLGSRSVGMLLLGVWLILTGLLPLLNMRLSATVSTALAVLAVVAGIL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059459

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences