NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F059446

Metagenome Family F059446

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059446
Family Type Metagenome
Number of Sequences 134
Average Sequence Length 40 residues
Representative Sequence RVLNNVVDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Number of Associated Samples 86
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 87.31 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (99.254 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(30.597 % of family members)
Environment Ontology (ENVO) Unclassified
(97.761 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(96.269 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.78%    β-sheet: 0.00%    Coil/Unstructured: 51.22%
Feature Viewer
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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.25 %
All OrganismsrootAll Organisms0.75 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10037487Not Available2575Open in IMG/M
3300000101|DelMOSum2010_c10078244Not Available1480Open in IMG/M
3300000115|DelMOSum2011_c10038828Not Available2012Open in IMG/M
3300000116|DelMOSpr2010_c10055199Not Available1708Open in IMG/M
3300000117|DelMOWin2010_c10053031Not Available1773Open in IMG/M
3300001450|JGI24006J15134_10178041Not Available669Open in IMG/M
3300001450|JGI24006J15134_10200033Not Available610Open in IMG/M
3300001460|JGI24003J15210_10031198Not Available1938Open in IMG/M
3300001460|JGI24003J15210_10034902Not Available1802Open in IMG/M
3300001472|JGI24004J15324_10018184Not Available2415Open in IMG/M
3300004097|Ga0055584_100210785Not Available1975Open in IMG/M
3300006027|Ga0075462_10023504Not Available1988Open in IMG/M
3300006029|Ga0075466_1033537Not Available1590Open in IMG/M
3300006735|Ga0098038_1029013Not Available2071Open in IMG/M
3300006735|Ga0098038_1148404Not Available782Open in IMG/M
3300006737|Ga0098037_1104182Not Available980Open in IMG/M
3300006802|Ga0070749_10090217Not Available1821Open in IMG/M
3300006802|Ga0070749_10137816Not Available1425Open in IMG/M
3300006802|Ga0070749_10446510Not Available709Open in IMG/M
3300006803|Ga0075467_10087207Not Available1877Open in IMG/M
3300006810|Ga0070754_10062121Not Available1932Open in IMG/M
3300006916|Ga0070750_10063538Not Available1762Open in IMG/M
3300006920|Ga0070748_1055083Not Available1572Open in IMG/M
3300006921|Ga0098060_1023098Not Available1923Open in IMG/M
3300006921|Ga0098060_1045768Not Available1302Open in IMG/M
3300006922|Ga0098045_1137093All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium567Open in IMG/M
3300006928|Ga0098041_1271963Not Available539Open in IMG/M
3300006929|Ga0098036_1052916Not Available1260Open in IMG/M
3300007229|Ga0075468_10031918Not Available1873Open in IMG/M
3300007229|Ga0075468_10036059Not Available1742Open in IMG/M
3300007276|Ga0070747_1038726Not Available1861Open in IMG/M
3300007276|Ga0070747_1092906Not Available1117Open in IMG/M
3300007276|Ga0070747_1129157Not Available917Open in IMG/M
3300007276|Ga0070747_1214918Not Available674Open in IMG/M
3300007345|Ga0070752_1211402Not Available769Open in IMG/M
3300007345|Ga0070752_1221926Not Available745Open in IMG/M
3300007540|Ga0099847_1031322Not Available1707Open in IMG/M
3300007640|Ga0070751_1082206Not Available1352Open in IMG/M
3300009433|Ga0115545_1230159Not Available626Open in IMG/M
3300009435|Ga0115546_1094565Not Available1091Open in IMG/M
3300009435|Ga0115546_1227711Not Available641Open in IMG/M
3300010149|Ga0098049_1089611Not Available966Open in IMG/M
3300010149|Ga0098049_1121083Not Available814Open in IMG/M
3300010150|Ga0098056_1250169Not Available587Open in IMG/M
3300010368|Ga0129324_10207940Not Available793Open in IMG/M
3300011252|Ga0151674_1113069Not Available707Open in IMG/M
3300013010|Ga0129327_10058741Not Available1910Open in IMG/M
3300013010|Ga0129327_10158620Not Available1129Open in IMG/M
3300017697|Ga0180120_10121552Not Available1123Open in IMG/M
3300017697|Ga0180120_10389337Not Available548Open in IMG/M
3300017706|Ga0181377_1045113Not Available860Open in IMG/M
3300017720|Ga0181383_1022299Not Available1703Open in IMG/M
3300017724|Ga0181388_1020131Not Available1674Open in IMG/M
3300017726|Ga0181381_1038062Not Available1071Open in IMG/M
3300017727|Ga0181401_1028889Not Available1603Open in IMG/M
3300017728|Ga0181419_1053029Not Available1053Open in IMG/M
3300017729|Ga0181396_1021355Not Available1288Open in IMG/M
3300017730|Ga0181417_1156253Not Available550Open in IMG/M
3300017731|Ga0181416_1015842Not Available1775Open in IMG/M
3300017732|Ga0181415_1102527Not Available645Open in IMG/M
3300017733|Ga0181426_1132924Not Available502Open in IMG/M
3300017746|Ga0181389_1013496Not Available2652Open in IMG/M
3300017746|Ga0181389_1026609Not Available1785Open in IMG/M
3300017746|Ga0181389_1080265Not Available916Open in IMG/M
3300017748|Ga0181393_1020842Not Available1915Open in IMG/M
3300017748|Ga0181393_1043246Not Available1248Open in IMG/M
3300017748|Ga0181393_1187359Not Available505Open in IMG/M
3300017751|Ga0187219_1124907Not Available760Open in IMG/M
3300017753|Ga0181407_1156551Not Available561Open in IMG/M
3300017755|Ga0181411_1025193Not Available1912Open in IMG/M
3300017755|Ga0181411_1228911Not Available516Open in IMG/M
3300017758|Ga0181409_1080680Not Available980Open in IMG/M
3300017758|Ga0181409_1091284Not Available912Open in IMG/M
3300017759|Ga0181414_1015902Not Available2055Open in IMG/M
3300017759|Ga0181414_1017881Not Available1935Open in IMG/M
3300017769|Ga0187221_1020219Not Available2336Open in IMG/M
3300017769|Ga0187221_1097390Not Available901Open in IMG/M
3300017769|Ga0187221_1230646Not Available528Open in IMG/M
3300017771|Ga0181425_1064530Not Available1185Open in IMG/M
3300017771|Ga0181425_1179984Not Available666Open in IMG/M
3300017772|Ga0181430_1057840Not Available1195Open in IMG/M
3300017776|Ga0181394_1032374Not Available1825Open in IMG/M
3300017779|Ga0181395_1037538Not Available1624Open in IMG/M
3300017782|Ga0181380_1250939Not Available587Open in IMG/M
3300017786|Ga0181424_10051747Not Available1778Open in IMG/M
3300022068|Ga0212021_1010256Not Available1579Open in IMG/M
3300022072|Ga0196889_1046010Not Available854Open in IMG/M
3300022178|Ga0196887_1014602Not Available2439Open in IMG/M
3300022178|Ga0196887_1020492Not Available1965Open in IMG/M
(restricted) 3300024518|Ga0255048_10134272Not Available1217Open in IMG/M
(restricted) 3300024520|Ga0255047_10066269Not Available1866Open in IMG/M
3300025071|Ga0207896_1008418Not Available1859Open in IMG/M
3300025071|Ga0207896_1024151Not Available1047Open in IMG/M
3300025071|Ga0207896_1033138Not Available874Open in IMG/M
3300025071|Ga0207896_1045703Not Available723Open in IMG/M
3300025079|Ga0207890_1009347Not Available2101Open in IMG/M
3300025079|Ga0207890_1024672Not Available1133Open in IMG/M
3300025084|Ga0208298_1011969Not Available2094Open in IMG/M
3300025086|Ga0208157_1081800Not Available805Open in IMG/M
3300025099|Ga0208669_1014794Not Available2094Open in IMG/M
3300025120|Ga0209535_1032732Not Available2429Open in IMG/M
3300025120|Ga0209535_1039465Not Available2127Open in IMG/M
3300025120|Ga0209535_1044650Not Available1945Open in IMG/M
3300025120|Ga0209535_1046877Not Available1876Open in IMG/M
3300025120|Ga0209535_1048732Not Available1825Open in IMG/M
3300025120|Ga0209535_1051325Not Available1754Open in IMG/M
3300025120|Ga0209535_1053584Not Available1699Open in IMG/M
3300025120|Ga0209535_1058003Not Available1601Open in IMG/M
3300025120|Ga0209535_1068368Not Available1409Open in IMG/M
3300025120|Ga0209535_1083964Not Available1196Open in IMG/M
3300025120|Ga0209535_1137825Not Available794Open in IMG/M
3300025120|Ga0209535_1163511Not Available681Open in IMG/M
3300025137|Ga0209336_10066111Not Available1082Open in IMG/M
3300025137|Ga0209336_10155469Not Available601Open in IMG/M
3300025168|Ga0209337_1068591Not Available1762Open in IMG/M
3300025543|Ga0208303_1021312Not Available1834Open in IMG/M
3300025543|Ga0208303_1021854Not Available1804Open in IMG/M
3300025543|Ga0208303_1023328Not Available1727Open in IMG/M
3300025590|Ga0209195_1133547Not Available520Open in IMG/M
3300025652|Ga0208134_1033245Not Available1789Open in IMG/M
3300025655|Ga0208795_1054925Not Available1166Open in IMG/M
3300025759|Ga0208899_1042442Not Available2015Open in IMG/M
3300025759|Ga0208899_1043728Not Available1972Open in IMG/M
3300025853|Ga0208645_1008549Not Available6509Open in IMG/M
3300025853|Ga0208645_1058193Not Available1800Open in IMG/M
3300025889|Ga0208644_1293818Not Available649Open in IMG/M
3300025890|Ga0209631_10053251Not Available2616Open in IMG/M
3300028022|Ga0256382_1173378Not Available515Open in IMG/M
3300029448|Ga0183755_1028677Not Available1678Open in IMG/M
3300029787|Ga0183757_1011518Not Available2467Open in IMG/M
3300029787|Ga0183757_1017099Not Available1829Open in IMG/M
3300031774|Ga0315331_10643125Not Available755Open in IMG/M
3300032277|Ga0316202_10177721Not Available988Open in IMG/M
3300034418|Ga0348337_144683Not Available683Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine30.60%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous25.37%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater25.37%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.73%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine3.73%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine2.99%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.24%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.49%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.49%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.75%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.75%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.75%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.75%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300011252Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeateEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025079Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025590Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1003748733300000101MarineRDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV*
DelMOSum2010_1007824423300000101MarineVLTKVRDASGLRPGDPRFDRMTARFVEDFARGGLAKILEV*
DelMOSum2011_1003882813300000115MarineLTKVRDASGLXPSDPKFDRMTARFVEDFARGGLAKILEV*
DelMOSpr2010_1005519913300000116MarineVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV*
DelMOWin2010_1005303113300000117MarineRVLNNVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV*
JGI24006J15134_1017804113300001450MarineRDASGLKPGDPRFDRMTARFVEDFARGGLAKILEV*
JGI24006J15134_1020003323300001450MarineIAIFTERVLNNVVDANGLRPGDPRFDRLTAKFIENFARGGLAKILEV*
JGI24003J15210_1003119813300001460MarineAIFTERVLTKVRDASGLRPSDPRFDRMTARFVEDFARGGLAKILEV*
JGI24003J15210_1003490233300001460MarineAIFTERVLTKVRDASGLKPGDPRFDRMTARFVEDFARGGLAKILEV*
JGI24004J15324_1001818423300001472MarineIAIFTERVLNNVVDANGLRPGDPRFDRLTAKFTENFARGGLAKILEV*
Ga0055584_10021078523300004097Pelagic MarineIAIFTERVLTKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0075462_1002350413300006027AqueousRDASGLKPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0075466_103353723300006029AqueousDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV*
Ga0098038_102901323300006735MarineLNKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0098038_114840423300006735MarineRVLNKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0098037_110418213300006737MarineVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV*
Ga0070749_1009021723300006802AqueousTDRVLTKVRDASGLRPGDPRFDRLTARFVEDFARGGLAKILEV*
Ga0070749_1013781613300006802AqueousVLTKVRDANGLRPSDPRFDRMTARFVEDFARGGLAKILEV*
Ga0070749_1044651013300006802AqueousVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0075467_1008720713300006803AqueousVVDANGLRPTDPRFDRLTARFIENFARGGLAKILEV*
Ga0070754_1006212113300006810AqueousNVVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV*
Ga0070750_1006353813300006916AqueousNNVVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV*
Ga0070748_105508313300006920AqueousNNVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV*
Ga0098060_102309813300006921MarineNVVDANGLRPTDPRFDRLTARFVEDFARGGLAKILEV*
Ga0098060_104576823300006921MarineTERVLNNVVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV*
Ga0098045_113709323300006922MarineLNNVVDANGLRPTDPRFDRLTAKFVEDFARGGLAKILEV*
Ga0098041_127196323300006928MarineAIFTERVLNNVVDANGLRPTDPRFDRLTARFVEDFARGGLAKILEV*
Ga0098036_105291623300006929MarineFTDRVLNNVVDANGLRPGDPRFDRLTARFVEDFARGGLAKILEV*
Ga0075468_1003191813300007229AqueousNVVDANGLRPTDPRFDRLTARFIENFARGGLAKILEV*
Ga0075468_1003605913300007229AqueousFTERVLTKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0070747_103872623300007276AqueousFTERVLTKVRVASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0070747_109290623300007276AqueousLNNVVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV*
Ga0070747_112915713300007276AqueousVRDASGLRPGDPRFDRMTARFVEDFARGGLAKILEV*
Ga0070747_121491813300007276AqueousVLNNVVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV*
Ga0070752_121140213300007345AqueousVVDANGLRPGDPRFDRLTARFVEDFARGGLAKILEV*
Ga0070752_122192623300007345AqueousVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV*
Ga0099847_103132223300007540AqueousLNNVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV*
Ga0070751_108220623300007640AqueousDANGLRPTDPRFDRLTARFIENFARGGLAKILEV*
Ga0115545_123015923300009433Pelagic MarineRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0115546_109456513300009435Pelagic MarineRVLTKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0115546_122771113300009435Pelagic MarineKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0098049_108961123300010149MarineVLTKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0098049_112108323300010149MarineTDRVLNKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV*
Ga0098056_125016913300010150MarineVDANGLRPTDFRFDRSTARFIDEIKTPGGPEQPFAHGGLAKILEV*
Ga0129324_1020794013300010368Freshwater To Marine Saline GradientTERVLNNVVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV*
Ga0151674_111306913300011252MarineTCLRPTYPNFDRLTARFIDETQNFAKGGLAKILEV*
Ga0129327_1005874113300013010Freshwater To Marine Saline GradientIAIFTERVLNNVVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV*
Ga0129327_1015862013300013010Freshwater To Marine Saline GradientTEKVLNNVVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV*
Ga0180120_1012155213300017697Freshwater To Marine Saline GradientRVLNNVVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV
Ga0180120_1038933713300017697Freshwater To Marine Saline GradientIAIFTERVLNNVVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV
Ga0181377_104511323300017706MarineIFTERVLNNVVDANGLRPTDPRFDRLTARIIEDFARGGLAKILEI
Ga0181383_102229923300017720SeawaterLNNVVDANGLRPGDPRFDRLSARFVEDFARGGLAKILEV
Ga0181388_102013113300017724SeawaterRVLTKVRDASGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0181381_103806213300017726SeawaterTKVRDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0181401_102888913300017727SeawaterTKVKDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0181419_105302923300017728SeawaterRVLNNVVDANGLRPTDPRFDRLTARIIEDFARGGLAKILEV
Ga0181396_102135513300017729SeawaterTKVRDASGLKPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0181417_115625313300017730SeawaterRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0181416_101584213300017731SeawaterVRDASGLKPSDPRFDRMTARFVEDFARGGLAKILEV
Ga0181415_110252723300017732SeawaterAIFTERVLTKVRDASGLKPSDPRFDRMTARFVEDFARGGLAKILEV
Ga0181426_113292413300017733SeawaterRVLTKVRDASGLKPSDPRFDRMTARFVEDFARGGLAKILEV
Ga0181389_101349613300017746SeawaterVLTKVRDASGLKPSDPRFDRMTARFVEDFARGGLAKILEV
Ga0181389_102660913300017746SeawaterNNVVDANGLRPGDPRFDRLSARFVEDFARGGLAKILEV
Ga0181389_108026513300017746SeawaterRVLNNVVDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0181393_102084223300017748SeawaterFTERVLTKVKDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0181393_104324623300017748SeawaterLNKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0181393_118735913300017748SeawaterRVLNNVVDANGLRPGDPRFDRLTARFVEDFARGGLAKILEV
Ga0187219_112490713300017751SeawaterKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0181407_115655123300017753SeawaterNNVVDANGLRPGDPRFDRLTARFVEDFARGGLAKILEV
Ga0181411_102519323300017755SeawaterVVDANGLRPTDFRFDRSTARFIDEVQDFARGGLAKILEV
Ga0181411_122891113300017755SeawaterVVDANGLRPGDPRFDRLTARFVEDFARGGLAKILEV
Ga0181409_108068013300017758SeawaterNKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0181409_109128413300017758SeawaterDANGLRPTDFRFDRSTARFIDEVQNFAHGGLAKILEV
Ga0181414_101590213300017759SeawaterVLNNVVYANGLRPGDPRFDRLSARFVEDFARGGLAKILEV
Ga0181414_101788123300017759SeawaterAIFTERVLTKVRDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0187221_102021913300017769SeawaterRVLNNVVDANGLRPGDPRFDRLSARFVEDFARGGLAKILEV
Ga0187221_109739013300017769SeawaterNVVDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0187221_123064613300017769SeawaterRDASGLKPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0181425_106453023300017771SeawaterRDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0181425_117998413300017771SeawaterERVLTKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0181430_105784023300017772SeawaterIAIFTQRVLNNVVDANGLRPTDPRFDRLTARIIEDFARGGLAKILEV
Ga0181394_103237423300017776SeawaterGLTKVRDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0181395_103753813300017779SeawaterVLNNVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV
Ga0181380_125093913300017782SeawaterTKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0181424_1005174733300017786SeawaterFTERVLNNVVDANGLRPGDPRFDRLTARFVEDFARGGLAKILEV
Ga0212021_101025613300022068AqueousFTERVLTKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0196889_104601023300022072AqueousVVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV
Ga0196887_101460213300022178AqueousNVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV
Ga0196887_102049223300022178AqueousNNVVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV
(restricted) Ga0255048_1013427223300024518SeawaterKVKDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
(restricted) Ga0255047_1006626913300024520SeawaterKVRDASGLKPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0207896_100841823300025071MarineVLNNVVDANGLRPGDPRFDRLTAKFIENFARGGLAKILEV
Ga0207896_102415113300025071MarineVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV
Ga0207896_103313813300025071MarineVLTKVKDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0207896_104570323300025071MarineLNNVVDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0207890_100934723300025079MarineLTKVRDASGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0207890_102467223300025079MarineLNNVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV
Ga0208298_101196913300025084MarineAIFTERVLNNVVDANGLRPTDPRFDRLTARFVEDFARGGLAKILEV
Ga0208157_108180023300025086MarineERVLNNVVDANGLRPTDPRFDRLTAKFVEDFARGGLAKILEV
Ga0208669_101479423300025099MarineTERVLNNVVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV
Ga0209535_103273223300025120MarineERVLTKVRDASGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0209535_103946513300025120MarineERVLNNVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV
Ga0209535_104465013300025120MarineLTKVRDASGLKPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0209535_104687723300025120MarineERVLTKVRDASGLKPSDPRFDRMTARFVEDFARGGLAKILEV
Ga0209535_104873213300025120MarineTERVLTKVRDASGLRPGDPRFDRMTARFVEDFARGGLAKILEI
Ga0209535_105132523300025120MarineVLTKVRDASGLKPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0209535_105358413300025120MarineRVLTKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0209535_105800313300025120MarineERVLTKVRDASGLRPSDPKFDRLTARFVEDFARGGLAKILEV
Ga0209535_106836823300025120MarineERVLNNVVDANGLRPGDPRFDRLSARFVEDFARGGLAKILEV
Ga0209535_108396413300025120MarineTERVLTKVRDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0209535_113782513300025120MarineTERVLTKVRDANGLRPGDPRFDRMTARFVEDFARGGLAKILEI
Ga0209535_116351123300025120MarineERVLTKVKDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0209336_1006611123300025137MarineTERVLNNVVDANGLRPGDPRFDRLTARFVEDFARGGLAKILEV
Ga0209336_1015546923300025137MarineIAIFTERVLNNVVDANGLRPGDPRFDRLTAKFIENFARGGLAKILEV
Ga0209337_106859113300025168MarineFTERVLTKVKDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0208303_102131223300025543AqueousVIFTERVLNNVVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV
Ga0208303_102185413300025543AqueousNVVDANGLRPTDPRFDRLTARFIENFARGGLAKILEV
Ga0208303_102332823300025543AqueousAIFTERVLNNVVDANGLRPGDPRFDRLTAKFVENFARGGLAKILEV
Ga0209195_113354713300025590Pelagic MarineTERVLTKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0208134_103324523300025652AqueousDRVLNKVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0208795_105492523300025655AqueousERVLTKVRDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0208899_104244223300025759AqueousLNNVVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV
Ga0208899_104372813300025759AqueousERVLNNVVDANGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0208645_100854913300025853AqueousVLTKVRDASGLRPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0208645_105819323300025853AqueousVVDANGLRPTDPRFDRLTARFIENFARGGLAKILEV
Ga0208644_129381823300025889AqueousVRDASGLRPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0209631_1005325123300025890Pelagic MarineAIFTERVLNNVVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV
Ga0256382_117337823300028022SeawaterNVVDAAGNRPSDPRFDRFTARFVDEVQDFARGGLAKILEV
Ga0183755_102867723300029448MarineFTERVLTKVRDASGLKPSDPKFDRMTARFVEDFARGGLAKILEV
Ga0183757_101151833300029787MarineFTDRVLNNVVDANGLRPGDPRFDRLTAKFVEDFARGGLAKILEV
Ga0183757_101709913300029787MarineRVLNNVVDANGLRPGDPRFDRLTARFVEDFAKGGLAKILEV
Ga0315331_1064312523300031774SeawaterRVLTKVRDASGLKPGDPRFDRMTARFVEDFARGGLAKILEV
Ga0316202_1017772113300032277Microbial MatAIFTERVLNNVVDANGLRPTDPRFDRLTAKFVENFARGGLAKILEV
Ga0348337_144683_551_6823300034418AqueousTERVLTKVRDASGLRPSDPRFDRMTARFVEDFARGGLAKILEV


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