NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F059397

Metagenome / Metatranscriptome Family F059397

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059397
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 44 residues
Representative Sequence VNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPG
Number of Associated Samples 124
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 86.57 %
% of genes from short scaffolds (< 2000 bps) 82.09 %
Associated GOLD sequencing projects 120
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (79.104 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(34.328 % of family members)
Environment Ontology (ENVO) Unclassified
(28.358 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.284 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.38%    β-sheet: 0.00%    Coil/Unstructured: 64.62%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF08281Sigma70_r4_2 93.28
PF07883Cupin_2 2.99
PF00202Aminotran_3 0.75
PF06441EHN 0.75
PF04545Sigma70_r4 0.75
PF00144Beta-lactamase 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG05962-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase foldCoenzyme transport and metabolism [H] 0.75
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.75
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.75
COG2367Beta-lactamase class ADefense mechanisms [V] 0.75


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.10 %
UnclassifiedrootN/A20.90 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352024|deeps_contig68164.41429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1542Open in IMG/M
3300001356|JGI12269J14319_10195128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii803Open in IMG/M
3300002245|JGIcombinedJ26739_100704240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia888Open in IMG/M
3300004633|Ga0066395_10873820All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii543Open in IMG/M
3300005610|Ga0070763_10345937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia826Open in IMG/M
3300005616|Ga0068852_100749752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales988Open in IMG/M
3300006176|Ga0070765_100421926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1247Open in IMG/M
3300006796|Ga0066665_10299750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1292Open in IMG/M
3300009092|Ga0105250_10315227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria679Open in IMG/M
3300009525|Ga0116220_10594718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia508Open in IMG/M
3300009824|Ga0116219_10133957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1438Open in IMG/M
3300010048|Ga0126373_12208710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia611Open in IMG/M
3300010362|Ga0126377_11768344All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces693Open in IMG/M
3300010376|Ga0126381_105006245Not Available508Open in IMG/M
3300010876|Ga0126361_10357636Not Available1392Open in IMG/M
3300011120|Ga0150983_10334575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia748Open in IMG/M
3300012351|Ga0137386_10633609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii769Open in IMG/M
3300012503|Ga0157313_1064192All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii509Open in IMG/M
3300012923|Ga0137359_10602547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia963Open in IMG/M
3300012927|Ga0137416_10785301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii841Open in IMG/M
3300012930|Ga0137407_10169246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1943Open in IMG/M
3300012960|Ga0164301_11018729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii652Open in IMG/M
3300016319|Ga0182033_11181856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii685Open in IMG/M
3300016404|Ga0182037_11459941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium606Open in IMG/M
3300016422|Ga0182039_11349971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia647Open in IMG/M
3300017821|Ga0187812_1097393All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300017822|Ga0187802_10117335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1007Open in IMG/M
3300017822|Ga0187802_10180630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia809Open in IMG/M
3300017924|Ga0187820_1056613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1069Open in IMG/M
3300017926|Ga0187807_1190093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii663Open in IMG/M
3300017933|Ga0187801_10472341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii528Open in IMG/M
3300017942|Ga0187808_10415155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii616Open in IMG/M
3300017946|Ga0187879_10177178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1199Open in IMG/M
3300017973|Ga0187780_10264200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1207Open in IMG/M
3300017975|Ga0187782_10240569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1359Open in IMG/M
3300018037|Ga0187883_10577566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii582Open in IMG/M
3300018060|Ga0187765_10213413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae1121Open in IMG/M
3300018085|Ga0187772_10200591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1340Open in IMG/M
3300019888|Ga0193751_1129556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii930Open in IMG/M
3300020080|Ga0206350_11544989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii697Open in IMG/M
3300020583|Ga0210401_10190569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1907Open in IMG/M
3300020583|Ga0210401_10360478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1316Open in IMG/M
3300021406|Ga0210386_10830824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii793Open in IMG/M
3300021420|Ga0210394_10364347All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1270Open in IMG/M
3300021479|Ga0210410_10106501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2478Open in IMG/M
3300022523|Ga0242663_1061774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia683Open in IMG/M
3300022528|Ga0242669_1043746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia745Open in IMG/M
3300022557|Ga0212123_10670220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii643Open in IMG/M
3300022712|Ga0242653_1040946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia726Open in IMG/M
3300022873|Ga0224550_1017635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1009Open in IMG/M
3300025588|Ga0208586_1055673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria889Open in IMG/M
3300025911|Ga0207654_10757774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii700Open in IMG/M
3300025929|Ga0207664_10454648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1143Open in IMG/M
3300025941|Ga0207711_11185343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii705Open in IMG/M
3300026322|Ga0209687_1204253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii610Open in IMG/M
3300026489|Ga0257160_1051018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia715Open in IMG/M
3300026496|Ga0257157_1044159All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia745Open in IMG/M
3300026538|Ga0209056_10694722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii514Open in IMG/M
3300027003|Ga0207722_1016286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii833Open in IMG/M
3300027073|Ga0208366_1023094All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia686Open in IMG/M
3300027575|Ga0209525_1029632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1351Open in IMG/M
3300027768|Ga0209772_10040288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1376Open in IMG/M
3300027874|Ga0209465_10280728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia834Open in IMG/M
3300027895|Ga0209624_10587081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia739Open in IMG/M
3300027898|Ga0209067_10271760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia926Open in IMG/M
3300028145|Ga0247663_1086614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii562Open in IMG/M
3300028742|Ga0302220_10059487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1578Open in IMG/M
3300028806|Ga0302221_10404137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia595Open in IMG/M
3300028808|Ga0302228_10379772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia628Open in IMG/M
3300028884|Ga0307308_10625700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii516Open in IMG/M
3300029943|Ga0311340_11631426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii500Open in IMG/M
3300030503|Ga0311370_11155435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii844Open in IMG/M
3300030510|Ga0268243_1102034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii667Open in IMG/M
3300030596|Ga0210278_1087736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia677Open in IMG/M
3300030740|Ga0265460_12561512Not Available544Open in IMG/M
3300031233|Ga0302307_10187551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1069Open in IMG/M
3300031543|Ga0318516_10840321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii518Open in IMG/M
3300031544|Ga0318534_10014609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae4036Open in IMG/M
3300031544|Ga0318534_10795669Not Available531Open in IMG/M
3300031549|Ga0318571_10315502Not Available591Open in IMG/M
3300031573|Ga0310915_10892775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia623Open in IMG/M
3300031573|Ga0310915_10892829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia623Open in IMG/M
3300031640|Ga0318555_10188128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1111Open in IMG/M
3300031681|Ga0318572_10818795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii553Open in IMG/M
3300031682|Ga0318560_10552413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii624Open in IMG/M
3300031713|Ga0318496_10629463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii592Open in IMG/M
3300031719|Ga0306917_11345637Not Available552Open in IMG/M
3300031723|Ga0318493_10514610Not Available662Open in IMG/M
3300031751|Ga0318494_10590269Not Available649Open in IMG/M
3300031778|Ga0318498_10487662Not Available543Open in IMG/M
3300031780|Ga0318508_1082536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia881Open in IMG/M
3300031793|Ga0318548_10604042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii534Open in IMG/M
3300031805|Ga0318497_10540772Not Available653Open in IMG/M
3300031819|Ga0318568_10045445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2516Open in IMG/M
3300031821|Ga0318567_10305385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii897Open in IMG/M
3300031823|Ga0307478_11217778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii627Open in IMG/M
3300031831|Ga0318564_10235467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia813Open in IMG/M
3300031893|Ga0318536_10179347Not Available1078Open in IMG/M
3300031897|Ga0318520_10041249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2378Open in IMG/M
3300031897|Ga0318520_10186336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1219Open in IMG/M
3300031897|Ga0318520_10435717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia804Open in IMG/M
3300031908|Ga0310900_11306407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii607Open in IMG/M
3300031981|Ga0318531_10439014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii591Open in IMG/M
3300032001|Ga0306922_11748147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii614Open in IMG/M
3300032008|Ga0318562_10002285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8760Open in IMG/M
3300032013|Ga0310906_11196207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii553Open in IMG/M
3300032059|Ga0318533_11067861All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300032076|Ga0306924_10018888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae7287Open in IMG/M
3300032089|Ga0318525_10330569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii782Open in IMG/M
3300032090|Ga0318518_10045267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2073Open in IMG/M
3300032094|Ga0318540_10649840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii508Open in IMG/M
3300032205|Ga0307472_100910740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii815Open in IMG/M
3300032892|Ga0335081_11576172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii723Open in IMG/M
3300032954|Ga0335083_10904578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii700Open in IMG/M
3300033004|Ga0335084_10299816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1661Open in IMG/M
3300033158|Ga0335077_11762205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii583Open in IMG/M
3300033412|Ga0310810_11037626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii694Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil34.33%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment5.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.22%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.22%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.48%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.99%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.99%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.99%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.99%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.24%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.24%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.24%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.24%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.49%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.49%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.49%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.49%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.75%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.75%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.75%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.75%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.75%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.75%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.75%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003218Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012503Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_RHost-AssociatedOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022712Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022873Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14EnvironmentalOpen in IMG/M
3300025588Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026489Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027003Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)EnvironmentalOpen in IMG/M
3300027073Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027768Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028145Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04EnvironmentalOpen in IMG/M
3300028742Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030510Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)EnvironmentalOpen in IMG/M
3300030596Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_004334502199352024SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPGRKPR
JGI12269J14319_1019512813300001356Peatlands SoilVNTEERQLADVLHRITPEPPRRVTVEQVAYRLVSEPRLGRGSRLG
JGI12635J15846_1073558123300001593Forest SoilVNTEERQLSDMLRRVTPEPPRRVTVEDVAFRLANQAPPGRGGHREP
JGIcombinedJ26739_10070424013300002245Forest SoilVNNDERRLADVLHRATPEPPRPVTVEQVAYRLVSEPKLRRQPRGRQALGREPRPR
JGI26339J46600_1013342913300003218Bog Forest SoilVNAEERQLAEMLHRVTPEPPRRVTVEDVAFRLAHEAGEARGEHREPR
Ga0066395_1087382013300004633Tropical Forest SoilVNTEERQLAELLHRVTPEPPRRVTTEDIAYRVASQAQGRGREPRP
Ga0070763_1034593723300005610SoilVNTEERKLADVLHRITPEPPRRLTVEQVAYRLVSEPKLGRQTRGRESAGPRP
Ga0068852_10074975233300005616Corn RhizosphereMNTEERQLAEMLHRVAPEPPRRVTVEDVAFRLASEP
Ga0075017_10109016523300006059WatershedsVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLSNEAGQARGGQARGGQ
Ga0070715_1039261313300006163Corn, Switchgrass And Miscanthus RhizosphereVNTEERQLAEMLHRITPEPPRRVTVEDIAYRVASEGNGTGRGREPR
Ga0070765_10042192613300006176SoilVNNDERRLADVLHRMTPEPPRPVTVEQVAYRLVSE
Ga0066665_1029975013300006796SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRVASEPGREPHPR
Ga0075426_1058948833300006903Populus RhizosphereVNTEERQLAEMLHRVTPEPPRRVTVEDIAYRVASEGHGAGRGREPR
Ga0105250_1031522713300009092Switchgrass RhizosphereMNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPGRKPRPGQRPGADRA
Ga0116220_1059471813300009525Peatlands SoilVNTEERQLADVLHRVTPEPPRLVTVEQVAYRLVSEPRLGRQTQGR
Ga0116219_1013395733300009824Peatlands SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLANE
Ga0126373_1220871013300010048Tropical Forest SoilVNTEEQNLAGVLHRVTPEPPRRVTVEQVAYRLVSEPRLGRQTRG
Ga0126377_1176834423300010362Tropical Forest SoilMNTEERQLAEMLHRVTPEPPRAVTVEDVAFRLTGEQGREPRSRRSVSVV*
Ga0126381_10500624523300010376Tropical Forest SoilMNTEERQLAEMLHRITPEPPRPVTVEDVASRLAREPRRDRDPRLARGPR
Ga0136449_10038801353300010379Peatlands SoilMNTEERQLSDLLHRLTPEPPRRVTIEDIAFRLANQAGNAHAGHREPRPRRAPR
Ga0126361_1035763613300010876Boreal Forest SoilVNNDERRLADVLHRVTPEPPRPVTVEQVAYRLVSE
Ga0150983_1033457513300011120Forest SoilVNTEERKLADVLHRITPEPPRRMTVEQVAYRLVSEPKLGRQTRGRESAGARPRRRGPLFS
Ga0137386_1063360933300012351Vadose Zone SoilVNTEELRLSQWLHRVTPEPPRQVTAEDVAARLARPA
Ga0157313_106419223300012503Arabidopsis RhizosphereMNTEERQLAEMLHRVAPEPPRRVTVEDVAFRLASEPR
Ga0137359_1060254733300012923Vadose Zone SoilVNAEERKLADVLHRITPEPQRPVTVEQVAYRLVSEPRLGRQA
Ga0137416_1078530133300012927Vadose Zone SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRMASEP
Ga0137407_1016924613300012930Vadose Zone SoilVNTEERQLAEMLHRVIPEPPRRVTVEDVAFRMASEPGRGSRSGRGFSL
Ga0164301_1101872913300012960SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAYRLASEPQREPRSRR
Ga0182033_1118185613300016319SoilVNTEERQLTEMLHRVTPEPPRRVTVEQVAYRLVSEPR
Ga0182037_1145994113300016404SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPRLSRQTRGREPRPRRG
Ga0182037_1149920813300016404SoilVNTEERQLTEMLHRVTPEPPRRVTVEDIACRLANQAGPGRQARYR
Ga0182039_1134997113300016422SoilVNTEERNLADVLHRITPEPPRRVTVEQVAYRLVSEPR
Ga0187812_109739313300017821Freshwater SedimentVNTEERNLADVLHRVTPEPPRRVTVEQVAYRLVSEPRL
Ga0187802_1011733533300017822Freshwater SedimentVNTEERQLTEMLHRITLEPPRRVTVEDIAFRLANQA
Ga0187802_1018063013300017822Freshwater SedimentVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLAGE
Ga0187820_105661313300017924Freshwater SedimentVNTEERKLVGVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRQTRGRESAGPRPR
Ga0187807_119009323300017926Freshwater SedimentVNTEERQLADVLHRITPEPPRPVTVEQVAYRLVSEPRLGRESRFGREQRP
Ga0187801_1047234113300017933Freshwater SedimentMNTEERQLADVLHRVTPEPPRRVTVEQVAYRLVSEPRLGRGSRAGR
Ga0187808_1041515513300017942Freshwater SedimentMNTEERQLTEMLHRITPEPPRRVTVEDIAFRLANQAGAGRQPR
Ga0187879_1017717833300017946PeatlandVNTEEQQLAEMLRRVTPEPPRRVTVEDVAFRLADQAGRSGRGRH
Ga0187780_1026420013300017973Tropical PeatlandMNTEERQLADVLHRITPEPPRRVTVEQVAYRLVSEPRL
Ga0187782_1024056913300017975Tropical PeatlandMNTEERQLTEMLHRVTPEPPRRVTVEDVATQVASQA
Ga0187883_1057756623300018037PeatlandVNTEEQQLAEMLRRVAPEPPRRVTVEDVAFRLADQAAGSGRRH
Ga0187765_1021341313300018060Tropical PeatlandMNTEERQLTDVLHRITPEPPRRVTVEQGAYRLVSEPR
Ga0187772_1020059133300018085Tropical PeatlandVNTQERQLADVLHRVTPEPPRRVTVEQVAYRLVSEP
Ga0187770_1110782113300018090Tropical PeatlandVNTEERQLSDLLHRLAPEPPRRVTVEDIAFRLANQAGPGHGGYREPR
Ga0193751_112955633300019888SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVASRLASQPGREPRP
Ga0206350_1154498913300020080Corn, Switchgrass And Miscanthus RhizosphereVNTEERQLAEMLHRVTPEPPRQVTVEDVAFRLASEHQ
Ga0210401_1019056913300020583SoilVNTEERKLADVLHRITPEPPRRVTVEQVAYRLVSEPE
Ga0210401_1036047833300020583SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRVASEPRREP
Ga0213881_1013442113300021374Exposed RockVNTGERQLSELLHRITPEPPRQVAVADVAARLASRAPRGHRRRA
Ga0210386_1083082423300021406SoilVNTEERQLAEMLHRVTPEPPRQVSVEDVSLRLADEAGRARGRYREP
Ga0210394_1036434733300021420SoilVNTEERKLADVLHRITPEPPRRVTVEQVAYRLVSEPKLGRQTRGRESAGPRPRRRGPVF
Ga0210410_1010650113300021479SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRVASEPRREPRSSHG
Ga0242659_107733923300022522SoilVNTEERQLSDLLHRLTPEPPRRVTVEDIAFRLANQAGQDRSGYR
Ga0242663_106177413300022523SoilVNTEERKLADVLHRITPEPPRRVTVEQVAYRLVSE
Ga0242669_104374613300022528SoilVNTEERKLADVLHRITPEPPRRVTVEQVAYRLVSDPRLGRRPRGRESAGPRPRRGGRVF
Ga0212123_1067022023300022557Iron-Sulfur Acid SpringVNTEERQLADLLHRVTPEPPRRVTVEDVAFRLANEAGQS
Ga0242653_104094613300022712SoilVNTEERKLADVLHRITPEPPRRVTVEQDAYRLVSESAGPRLGRQTRGRESAGPRP
Ga0224550_101763513300022873SoilVNTEERKLTDALHQITPEPPRPVTVEQVAYRMVSEPRLSGQPRGRQSRGRQPRGREPRA
Ga0208586_105567313300025588Arctic Peat SoilVNTEERQLAEMLRRVTPEPPRGLTTEDVAVRLASQ
Ga0207654_1075777413300025911Corn RhizosphereMNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPRREY
Ga0207664_1045464833300025929Agricultural SoilVNTEERQLAEMLHRITPEPPRRVTVEDIAYRVANEG
Ga0207711_1118534323300025941Switchgrass RhizosphereMNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPGRKPRP
Ga0207641_1175030923300026088Switchgrass RhizosphereVNTEERQLAEMLHQITPEPPRRVTVEDIAYRVASERHGSGREPRS
Ga0209687_120425323300026322SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAYRLASEPQREPRSRRGS
Ga0257160_105101823300026489SoilVNTEERKLADLLHRITPEPPRRVTVEQVAYRLVSESSG
Ga0257157_104415923300026496SoilVNTEERKLADLLHRIAPEPPRRVTVEQVAYRLVSEPRLGRQTRGREPRPRR
Ga0209056_1069472213300026538SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRVASEP
Ga0207722_101628613300027003Tropical Forest SoilVNTEERQLTEVLHRITPEPPRRVTVEDIAFRLASQAGA
Ga0208366_102309423300027073Forest SoilVNTEERKLADLLHRITPEPPRRVTVEQVAYRLVSEPAGP
Ga0209525_102963233300027575Forest SoilVNNDERRLADVLHRATPEPPRPVTVEQVAYRLVSEPQLGRQSRGRESRPRRGPVFSR
Ga0209772_1004028813300027768Bog Forest SoilVNTEERKLADVLHRITPEPPRRVTVEQVAYRLVSEPKLGQTRGRESA
Ga0209465_1028072823300027874Tropical Forest SoilVNTEERQLAEMLHRVTPEPPRQVTVEDVAYRLAREPGLG
Ga0209275_1033819933300027884SoilVNTEERQLAEMLHRVTPEPPRPVTVEDIAIRLANKNAPARGAGRGAVRMPG
Ga0209624_1058708113300027895Forest SoilVNTEERKLADLLHRVTPEPPRRVTVEQVAYRLVSEPQ
Ga0209067_1027176033300027898WatershedsVNTEERQLAEMLHRVTPEPPRGVTVEDVAFRLASE
Ga0247663_108661413300028145SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRVASEPRREPRSS
Ga0302220_1005948733300028742PalsaVNTEERKLTDALHQITPEPPRPVTVEQVAYRMVSEPR
Ga0302221_1040413723300028806PalsaVNTEERKLTDALHQITPEPPRPVTVEQVAYRMVSEP
Ga0302228_1037977223300028808PalsaVNTEERKLTDALHQITPEPPRPVTVEQVAYRMVSEPRLSGQPRGRQPRGRQPRGRE
Ga0302229_1026115913300028879PalsaVNTEERQLADMLHRVAPEPPGRVTVEDVAFRLAHQAGESGRRHRE
Ga0307308_1062570023300028884SoilMNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPERGPRSRRG
Ga0311340_1163142613300029943PalsaVNAEERQLADMLRRVAPEPPRRVTVEDVAFRLAHEAGGP
Ga0311370_1115543513300030503PalsaVNTEERQLADMLHRVAPEPPRRVTVEDVAFRLANQAGAPGR
Ga0268243_110203413300030510SoilMNTEERQLAEMLHRVTPEPPRGVTVEDVAFRLAGEPGREPRSRRGF
Ga0210278_108773623300030596SoilVNTEERQLSEMLRRVTPEPPRRVTMEDVAFRLDSHAAGPTRP
Ga0265460_1256151223300030740SoilVNNEERRLADVLHRMTPEPPRPVTVEQVAYRLVSEAQHGRQPRPGR
Ga0265461_1152781623300030743SoilVNTEERQLSEMLRRVTPEPPRRVTVEDIACRLANRAGPGHQAQYGQPQD
Ga0302307_1018755113300031233PalsaVNTEERQLADMLRRVAPEPPRQVTVEDVAFRLANQ
Ga0318516_1084032113300031543SoilVNTEERQLAEMLHRVTPEPPRRVTAEDIAYRVASEPQ
Ga0318534_1001460963300031544SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRPSRDGEPRPRRGGLSWS
Ga0318534_1079566913300031544SoilVNTEERNLADVLHRVTPEPPRRVTVEQVAYRLVSEPRLGHQTRGREPRPRRGGLS
Ga0318571_1031550223300031549SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRPSRDGEPRPRRGGSGVTRC
Ga0310915_1089277513300031573SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPRLSRQTRGREPRPRRGG
Ga0310915_1089282913300031573SoilVNTEERKLADVLHRVTPEPPRRVTVEQVAYRLVSEPRLGRQTRGREP
Ga0318555_1018812833300031640SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEP
Ga0318572_1081879513300031681SoilVNTEERQLAEMLHRVTPEPPRQVTVEDVAHRLASEPR
Ga0318560_1055241323300031682SoilVDTEERQLAEMLHRVTPEPPRRVTVEDVAYRLASEPPREPRSR
Ga0318560_1057753223300031682SoilVNPDDRKLADVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRPSRDGEPRPRRGGLSWSRAF
Ga0318496_1062946323300031713SoilMNTEERQLAEMLHRVTPEPPRPVTVEDVAHRLASGPQREPRS
Ga0318496_1074378723300031713SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPELGRQSRGREPRPRRGGLSLSRAF
Ga0306917_1134563723300031719SoilVNTEEQNLADVLHRVTPEPPRRVTVEQVAYRLVSE
Ga0318493_1051461023300031723SoilVNTEERNLADVLHRVTPEPPRRVTVEQVAYRLVSEPRLGRQTRGREPRP
Ga0318494_1059026923300031751SoilVNTEERNLADVLHRVTPEPPRRVTVEQVAYRLVSEPRLG
Ga0318498_1048766213300031778SoilVNTEERNLADVLHRITPEPPRRVTVEQVAYRLVSEARLAQEPRRPRH
Ga0318508_108253633300031780SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRPSRDGEPRPRRGGMSWS
Ga0318548_1060404213300031793SoilVNTEERQLAETLHRVTPEPPRQVTVEDVAYRVASEPQRGPR
Ga0318497_1054077223300031805SoilVNTEERNLADVLHRITPEPPRRVTVEQVAYRLVSEPRLGRQTRGREPRP
Ga0318568_1004544553300031819SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRPSRDGEPRPRRGGMS
Ga0318567_1030538523300031821SoilVNTEERQLTETLHRITPEPPRHVTVEDVALRLANQAGPGRQPRYR
Ga0307478_1117328323300031823Hardwood Forest SoilVNTEERQLSDLLHRLTPEPPRRVTVEDIAFRLANQAGQDRGGYR
Ga0307478_1121777813300031823Hardwood Forest SoilMNTEERQLAEMLHRVTPEPPRRVTVEDVTFRVASEPQREPR
Ga0318564_1023546713300031831SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPGLSRQT
Ga0318536_1017934713300031893SoilVNIEERQLADVLHRVTPEPPRRVTVEQVAYRLVSEPRLRREPR
Ga0318520_1004124953300031897SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRPSRGGEPGPRRGGSG
Ga0318520_1018633633300031897SoilVNTEERNLADVLHRVTPEPPRRVTVEQVAYRLVSEPRLGRQTRGREPR
Ga0318520_1043571713300031897SoilVNTEERNLADVLHRITPEPPRRVTVEQVAYRLVSEPRLGRQTRG
Ga0310900_1130640713300031908SoilMNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPGRKPRPGRGSL
Ga0318531_1043901423300031981SoilVNTEERQLTETLHRITPEPPRHVTVEDVALRLANQAGPGRQPRYRR
Ga0306922_1174814723300032001SoilMNSEERQLAEMLQRVTPEPPRRVTVEDVAFRVASEVGRSPRRGPR
Ga0318562_1000228513300032008SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRPSRDGEPRPRRGG
Ga0310906_1119620723300032013SoilMNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPGRKPRPGRGSLW
Ga0318533_1106786113300032059SoilVNTEERNLADVLHRITPEPPRRVTVEQVAYRLVSEPRLGRQTRA
Ga0306924_1001888893300032076SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRPSRDGEP
Ga0318525_1033056923300032089SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAYRLASEPPREPRSR
Ga0318518_1004526743300032090SoilVNTEERKLADVLHRVTPEPPRPVTVEQVAYRLVSEPQLGRPSRGG
Ga0318540_1064984013300032094SoilVNTEERQLTETLHRITPEPPRHVTVEDVALRLANQA
Ga0307472_10091074023300032205Hardwood Forest SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRVASEPRR
Ga0335081_1157617223300032892SoilVNNEEQRLAEALHRLTPEPPRRVTTEQVAYRLVSQ
Ga0335083_1090457813300032954SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPGRGPRSR
Ga0335084_1029981633300033004SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAFRLASEPG
Ga0335077_1176220513300033158SoilVTTEERQLAEMLHRITPEPPRRVTVADVAARVAHDFQPARPPRR
Ga0310810_1103762613300033412SoilVNTEERQLAEMLHRVTPEPPRRVTVEDVAYRLASEPQR


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