Metagenome / Metatranscriptome Family F059393

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059393
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	84 residues
Representative Sequence	MKKTVVSHAAFGCATALLASFVTYLALAPGSMSPWQAHAQTQPPANTGTRQTELFKTTMNDVLGRVVTIRRTERDPGNGSGPHRHP
Number of Associated Samples	113
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.50 %
% of genes near scaffold ends (potentially truncated)	97.76 %
% of genes from short scaffolds (< 2000 bps)	90.30 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.254 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.105 % of family members)
Environment Ontology (ENVO)	Unclassified (44.776 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.761 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.32% β-sheet: 16.67% Coil/Unstructured: 57.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF13442	Cytochrome_CBB3	18.66
PF04909	Amidohydro_2	15.67
PF01070	FMN_dh	6.72
PF07883	Cupin_2	5.22
PF04773	FecR	3.73
PF03401	TctC	1.49
PF13360	PQQ_2	1.49
PF00561	Abhydrolase_1	0.75
PF07690	MFS_1	0.75
PF01011	PQQ	0.75
PF08450	SGL	0.75
PF13570	PQQ_3	0.75
PF13545	HTH_Crp_2	0.75
PF01738	DLH	0.75
PF00892	EamA	0.75
PF00903	Glyoxalase	0.75
PF13493	DUF4118	0.75
PF02423	OCD_Mu_crystall	0.75
PF13847	Methyltransf_31	0.75
PF04199	Cyclase	0.75
PF00196	GerE	0.75
PF00550	PP-binding	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	6.72
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	6.72
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.49
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.75
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.75
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.75
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.57 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	75.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.48 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	66.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.99 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	66.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.75 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	66.42 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	0.75 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.75 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	66.42 %
unclassified Polynucleobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter	0.75 %
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	0.75 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	66.42 %
Polynucleobacter sp. VK13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter → Polynucleobacter sp. VK13	0.75 %
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	0.75 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.75 %
Unclassified	root	N/A	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10623136	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300001850\|RCM37_1021144	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300004153\|Ga0063455_100212542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	971	Open in IMG/M
3300004156\|Ga0062589_102363597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	547	Open in IMG/M
3300004643\|Ga0062591_100584055	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005179\|Ga0066684_10115678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1663	Open in IMG/M
3300005179\|Ga0066684_10524299	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005180\|Ga0066685_10809452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	634	Open in IMG/M
3300005333\|Ga0070677_10246631	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005364\|Ga0070673_100029707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4079	Open in IMG/M
3300005450\|Ga0066682_10637904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	663	Open in IMG/M
3300005466\|Ga0070685_11054869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	612	Open in IMG/M
3300005536\|Ga0070697_100197724	All Organisms → cellular organisms → Bacteria → Proteobacteria	1708	Open in IMG/M
3300005536\|Ga0070697_100269046	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300005540\|Ga0066697_10435599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	757	Open in IMG/M
3300005552\|Ga0066701_10348294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	918	Open in IMG/M
3300005557\|Ga0066704_10104598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1862	Open in IMG/M
3300005557\|Ga0066704_11041303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300005558\|Ga0066698_10463870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	863	Open in IMG/M
3300005558\|Ga0066698_10755437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	635	Open in IMG/M
3300005558\|Ga0066698_11028386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	523	Open in IMG/M
3300005559\|Ga0066700_10428732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	930	Open in IMG/M
3300005568\|Ga0066703_10142790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1435	Open in IMG/M
3300005569\|Ga0066705_10215413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1207	Open in IMG/M
3300005569\|Ga0066705_10267145	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300005586\|Ga0066691_10408690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	807	Open in IMG/M
3300005586\|Ga0066691_10430450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	786	Open in IMG/M
3300005598\|Ga0066706_10509316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	958	Open in IMG/M
3300005841\|Ga0068863_100701285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1006	Open in IMG/M
3300006046\|Ga0066652_101353312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	669	Open in IMG/M
3300006050\|Ga0075028_100541829	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300006163\|Ga0070715_10558457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	665	Open in IMG/M
3300006173\|Ga0070716_100900013	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300006581\|Ga0074048_13051645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	533	Open in IMG/M
3300006852\|Ga0075433_11608147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	560	Open in IMG/M
3300006854\|Ga0075425_102423323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	582	Open in IMG/M
3300006953\|Ga0074063_14240617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	611	Open in IMG/M
3300006969\|Ga0075419_10255744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1171	Open in IMG/M
3300009012\|Ga0066710_103988025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	552	Open in IMG/M
3300009089\|Ga0099828_10585612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1005	Open in IMG/M
3300009090\|Ga0099827_11232261	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300009090\|Ga0099827_11904658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	518	Open in IMG/M
3300009094\|Ga0111539_10773338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1118	Open in IMG/M
3300009094\|Ga0111539_12072661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	660	Open in IMG/M
3300009137\|Ga0066709_102870025	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300009143\|Ga0099792_10401630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	839	Open in IMG/M
3300010304\|Ga0134088_10560718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	566	Open in IMG/M
3300010320\|Ga0134109_10084872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1088	Open in IMG/M
3300010322\|Ga0134084_10279537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	613	Open in IMG/M
3300010323\|Ga0134086_10063470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1267	Open in IMG/M
3300010329\|Ga0134111_10052800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1479	Open in IMG/M
3300010364\|Ga0134066_10169710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	700	Open in IMG/M
3300010397\|Ga0134124_10001746	All Organisms → cellular organisms → Bacteria → Proteobacteria	17439	Open in IMG/M
3300010399\|Ga0134127_13142562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	539	Open in IMG/M
3300010400\|Ga0134122_13021086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	525	Open in IMG/M
3300011269\|Ga0137392_10034464	All Organisms → cellular organisms → Bacteria	3702	Open in IMG/M
3300011271\|Ga0137393_10887842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	761	Open in IMG/M
3300011397\|Ga0137444_1004501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1683	Open in IMG/M
3300011428\|Ga0137456_1001767	All Organisms → cellular organisms → Bacteria	3301	Open in IMG/M
3300012096\|Ga0137389_10729510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	851	Open in IMG/M
3300012189\|Ga0137388_10892470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	822	Open in IMG/M
3300012201\|Ga0137365_10092770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2274	Open in IMG/M
3300012207\|Ga0137381_10032613	All Organisms → cellular organisms → Bacteria	4214	Open in IMG/M
3300012209\|Ga0137379_11739099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	519	Open in IMG/M
3300012211\|Ga0137377_10439033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1244	Open in IMG/M
3300012349\|Ga0137387_10906600	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300012351\|Ga0137386_10449647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	928	Open in IMG/M
3300012356\|Ga0137371_10205004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1544	Open in IMG/M
3300012359\|Ga0137385_10122397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2296	Open in IMG/M
3300012359\|Ga0137385_11221442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	613	Open in IMG/M
3300012359\|Ga0137385_11310703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	587	Open in IMG/M
3300012469\|Ga0150984_116354957	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300012917\|Ga0137395_10194612	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300012917\|Ga0137395_10802635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	682	Open in IMG/M
3300012917\|Ga0137395_11302325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	502	Open in IMG/M
3300012924\|Ga0137413_10776457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	734	Open in IMG/M
3300012925\|Ga0137419_11024670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	685	Open in IMG/M
3300012925\|Ga0137419_11410549	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012929\|Ga0137404_10656582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	946	Open in IMG/M
3300012930\|Ga0137407_11760265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	591	Open in IMG/M
3300012930\|Ga0137407_12108502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	538	Open in IMG/M
3300012944\|Ga0137410_11997970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	515	Open in IMG/M
3300012961\|Ga0164302_10402149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	934	Open in IMG/M
3300012972\|Ga0134077_10336599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	641	Open in IMG/M
3300012984\|Ga0164309_10215303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1331	Open in IMG/M
3300013297\|Ga0157378_10768448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	987	Open in IMG/M
3300015242\|Ga0137412_10349620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1151	Open in IMG/M
3300015245\|Ga0137409_10029967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5282	Open in IMG/M
3300015245\|Ga0137409_10486599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1056	Open in IMG/M
3300015264\|Ga0137403_10492041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1098	Open in IMG/M
3300015264\|Ga0137403_11346085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	561	Open in IMG/M
3300015359\|Ga0134085_10073751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1391	Open in IMG/M
3300015373\|Ga0132257_102867117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	628	Open in IMG/M
3300017654\|Ga0134069_1164355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	746	Open in IMG/M
3300017657\|Ga0134074_1378224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	525	Open in IMG/M
3300019866\|Ga0193756_1022829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	873	Open in IMG/M
3300021082\|Ga0210380_10604771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	503	Open in IMG/M
3300021363\|Ga0193699_10181377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	872	Open in IMG/M
3300024224\|Ga0247673_1002191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2303	Open in IMG/M
3300024284\|Ga0247671_1090673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	515	Open in IMG/M
3300024317\|Ga0247660_1028796	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300025910\|Ga0207684_11118128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	655	Open in IMG/M
3300025923\|Ga0207681_10815225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	780	Open in IMG/M
3300025939\|Ga0207665_10705266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	793	Open in IMG/M
3300025940\|Ga0207691_10695390	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300026023\|Ga0207677_10074432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2410	Open in IMG/M
3300026041\|Ga0207639_10376398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1274	Open in IMG/M
3300026095\|Ga0207676_10101993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2381	Open in IMG/M
3300026320\|Ga0209131_1263172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	672	Open in IMG/M
3300026333\|Ga0209158_1146652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	866	Open in IMG/M
3300026538\|Ga0209056_10096451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2429	Open in IMG/M
3300026548\|Ga0209161_10370561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	635	Open in IMG/M
3300027875\|Ga0209283_10565926	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300027882\|Ga0209590_10633857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	687	Open in IMG/M
3300027882\|Ga0209590_11049875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	506	Open in IMG/M
3300027903\|Ga0209488_10414984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	995	Open in IMG/M
3300028380\|Ga0268265_10752235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter → Polynucleobacter sp. VK13	946	Open in IMG/M
3300028536\|Ga0137415_10267642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1515	Open in IMG/M
3300028536\|Ga0137415_10659350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	858	Open in IMG/M
3300028814\|Ga0307302_10195722	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300031226\|Ga0307497_10119624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1054	Open in IMG/M
3300031720\|Ga0307469_10349986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1240	Open in IMG/M
3300031720\|Ga0307469_10775597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	877	Open in IMG/M
3300031903\|Ga0307407_10773701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	728	Open in IMG/M
3300031911\|Ga0307412_10189131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1555	Open in IMG/M
3300032017\|Ga0310899_10392832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	663	Open in IMG/M
3300032126\|Ga0307415_100183840	All Organisms → cellular organisms → Bacteria → Proteobacteria	1643	Open in IMG/M
3300032174\|Ga0307470_11269651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	602	Open in IMG/M
3300032180\|Ga0307471_100555977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1302	Open in IMG/M
3300032180\|Ga0307471_101115773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	954	Open in IMG/M
3300033433\|Ga0326726_11020136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	804	Open in IMG/M
3300034417\|Ga0364941_017094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1441	Open in IMG/M
3300034820\|Ga0373959_0018195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1320	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.58%
Host-Associated	Host-Associated	16.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.85%
Plants	Host-Associated → Plants	16.42%
Aquatic	Environmental → Aquatic	3.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.22%
Sediment	Environmental → Aquatic → Sediment	2.24%
Freshwater	Environmental → Aquatic → Freshwater	1.49%
Peat	Environmental → Terrestrial → Peat	0.75%
Floodplain	Environmental → Terrestrial → Floodplain	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.64%
Loam	Environmental → Terrestrial → Soil → Loam	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.75%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.49%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.24%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.75%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001850	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2a	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011397	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT319_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_106231361	3300001686	Soil	MKNTVISHAAFGCATALLASSATYLALAQSPPAAGAGVRQTELFKTTMNDVLGRVVTVRRTERDPGNGSGPHRHPGSHTIGYVLEGTYEVKV
RCM37_10211442	3300001850	Marine Plankton	MKKTIVSHLLFGSATALLASGATYLALAPDVPSSFWLSPAFAQTPPAGGGTRQIDLFKTTMDDVLGRVVTIRRTERDPGGASPAHRHPGSHTFGYILEGSYEVKIN
Ga0063455_1002125423	3300004153	Soil	MKNTVISHAAFGCATALLASSATYLALAQSPPAAGAGVRQTELFKTTMNDVLGRVVTVRRTERDPGNGSGPHRHPGSHT
Ga0062589_1023635971	3300004156	Soil	MRNTVISHAAFGCATALLASSATYLALAQSPPAAGAGLRQTELFKTTMNDVLGRVVTVRRTERDPGNGSGPHRHPGSHTFG
Ga0062591_1005840551	3300004643	Soil	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSG
Ga0066684_101156782	3300005179	Soil	MKKSVISHAVFGGATALLASFVTWLALAPGSMSLLEAHAQTPPTNAPARQTELFKKTMSDVLGREVTIRRLERDPGTGSAPHRHPGSHTFGYVLEGSYEVK
Ga0066684_105242992	3300005179	Soil	MKNSLISHAAFGCATALFASGITYVSLAGWPEWMSPPQAHAQAPANPGTRQTELFKTVMNDVLGRVVTLRRIERDPGNGSGPHRHPGSHTFGYVLEGSYEV
Ga0066685_108094521	3300005180	Soil	MKNSLISHAAFGCATALFASGITYVSLAGWPEWMSPPQAHAQAPANPGTRQTELFKTVMNDVLGRVVTLRRIERDPGNGSGP
Ga0070677_102466313	3300005333	Miscanthus Rhizosphere	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGPHRHPGSHTIGYVLEGTYEVK
Ga0070673_1000297074	3300005364	Switchgrass Rhizosphere	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGGRTATRAAIRSATCSKEPTR*
Ga0066682_106379042	3300005450	Soil	MKNSLISHAAFGCATALLASSVTYVTLAGWPESMSPLQAHAQTPPANTGTRQTELFKTTMNDVLGRVVTLRRTERDPGNGSG
Ga0070685_110548691	3300005466	Switchgrass Rhizosphere	MRKTVISHVAFGCASALLASSVTYLAQGQPAPSTGLRQTELFKTKMDDVLGRVVTVRRTERDPGNGSAPHRHPGSHTIGYVLE
Ga0070697_1001977244	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGPHRHPGSHTIGYVLEGTYE
Ga0070697_1002690461	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSVISHAVFGGATALLASFLTWLALAPGSLSLLEAHAQTPPANSAARQTELFKTTMNDVLGRVVTIRRLERDAGTGSGPHRHPGSHTFGYVLEGSYEV
Ga0066697_104355992	3300005540	Soil	MKNSLISHAAFGCATALLASGITYVTLAGWPEWMSPPQAHAQAPANPGTRQTELFKTVMNDVLGRVVTL
Ga0066701_103482941	3300005552	Soil	LLGSAVTYVVLAGLPKSLSPLQAYAQNQLPADNGTRQTELFKTTMNDVLGRVVTIRRTE
Ga0066704_101045983	3300005557	Soil	MKKTIISHTVFGCATALLASCATYWAVAGLHESISTLQAYAQTQPPAAGTRQIELFKTTMSDVLGRVVTIRRTERDPGNSGDPHRHPGSHTFGYVLEGTYEV
Ga0066704_110413032	3300005557	Soil	MKKTVVSHAALGCATALLASFATYLALVPESMSLSQANAQTPPANTAARQTELFKTTMNDVLGRVVTLRRLERDAGTGSGPHRHPGSHTFGYVLEGSYEV
Ga0066698_104638702	3300005558	Soil	MKKTIISHAAFGCATALLASCVTYLALAPESMSPLQAHAQTPPPVNTGVRQTELFKTTMNDVLGRVVTIRRTERDPGN
Ga0066698_107554372	3300005558	Soil	MKSTVVSHAAFGCATALLASSATYVTLAGWPESMSPLQAHAQTPANPGTRQTELFKTTMNDVLGRVVTLRRTERDPGSGSGPHRHPGSHTFGYVLEGSYEV
Ga0066698_110283862	3300005558	Soil	MKKTVVSHAALGCATALLASFATYLALVPESMSLSQANAQTPPANTAARQTELFKTTMNDVLGRVVTLRRLERDAGTGSGPHRHPGSHTFGYVLEGSYE
Ga0066700_104287321	3300005559	Soil	MNKTIASHAAFGCATALLASFVTYLAYAQAPANAPARQTELFKTTMNDVLGRVVTIRRLERDAGTGSGPHRHPGSHTFG
Ga0066703_101427902	3300005568	Soil	VKKSIISHAVLGCATALLASFVTWLALAPESMSLPQAHAQTPPANTAARQTELFKTSMNDVLGREVTIRRLERDAGTGSGPH
Ga0066705_102154131	3300005569	Soil	MNKTIASHAAFGCATALLASLVTYLAHAQAPANAPARQTELFKKTMSDVLGREVTIRRLERDPGTGSAPHRHPGSHTFGYVLEGSYEV
Ga0066705_102671451	3300005569	Soil	MKKSVISHAVFGGATALLASFVTWLALAPGSMSLLEAHAQTPPTNAPARQTELFKKTMSDVLGREVTIRRLERDPGTGSAPHRHPGSHTFGYVLEGSYEV
Ga0066691_104086902	3300005586	Soil	MNKTIASHAAFGCATALLASFVTYLAYAQAPANAPARQTELFKTTMNDVLGRVVTIRRLERDAGTGSGPH
Ga0066691_104304502	3300005586	Soil	VKKSIISHAVLGCATALLASFVTWLALAPESMSLPQAHAQTPPANTAARQTELFKTSMNDVLGREVTIRRLERDAGTGSGPHRHPGSHTFGYVLE
Ga0066706_105093161	3300005598	Soil	MKKSVISHAVFGGATALLASFVTWLALAAGSMSLLEAHAQTPPANTAARQTELFKTTMNDVLGRVVTIRRLERDAGTGS
Ga0068863_1007012854	3300005841	Switchgrass Rhizosphere	MRKTVISHVAFGCASALLASSVTYLAQGQPAPSTGLRQTELFKTKMDDVLGRVVTVRRTERDPGNGS
Ga0066652_1013533122	3300006046	Soil	MNKTIASHAAVGAATALLASVATYVSIAGWPQALVPSQAHAQTPPATGTRQTDLFKTTMSDVLGRVVTIRRTERDPGVGGDPHRHPGSHTFGYVLEGTYE
Ga0075028_1005418291	3300006050	Watersheds	MNKTIVSHAAFGCATALLAFCLTYLALAPESLSLSQAHAQTPPANTAARQTELFKTTMNDVLGREVTIRRLERDAGTGSGPHRHPGSHPFGYVLEGSYEVKV
Ga0070715_105584571	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNKTIASHAAFGCATALLASFATWLYAQAPANAPARQTELFKTTMSDVLGREVTIRRLERDPGTGSGPHRHPGSHTFGYV
Ga0070716_1009000131	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRTTVISHAAFGCATALFASCVTYLALAQGQPAASTGVRQTELFKTTMDDVLGRVVTVRRTERD
Ga0074048_130516451	3300006581	Soil	MRNSVISHAAFGCATALLASSVTYLALAGWPESMSPSRAHAQSQPAASTGVRQTELFKTTMNDVLGRVVTVRRTERDPGNGSGPHRHP
Ga0075433_116081472	3300006852	Populus Rhizosphere	MNKTFVSHIAFGCVTAALASGATYVALTGLTDPTSLSQAHAQTPPPSGFRQTELFKTTMNDVLGRVVTIRRTERDPSNGSGAHRHPGSHTFGYVLEGAYEVKI
Ga0075425_1024233232	3300006854	Populus Rhizosphere	MRNSVISHAAFGCASALLASSATYLALAQSPPAAGAGLRQTELFKTTMNDVLGRVVTVRRTERDPGNGSGPHRHPGSHTIG
Ga0074063_142406171	3300006953	Soil	MKNTVISHAAFGCATALLASSVTYLALAGWPESMSPSRAHAQSQPAASTGVRQTELFKTTMNDVLGRVVTVRRTERDPGNG
Ga0075419_102557442	3300006969	Populus Rhizosphere	VKKTVISHVVLGCATAALSSALTYLALAGWPSALSPTHAQAQTAASGVRQIDLFKTTMNDVMDRVVTIRRTERDPGNGSG
Ga0066710_1039880251	3300009012	Grasslands Soil	MKKSVISHAVFGGATALLASFVTWLALAPGSMSLLEAHAQTPPANAPARQTELFKKTMSDVLGREVTLRRLERDPGTGSAPHRHPGSHTFGYVLEGSYE
Ga0099828_105856122	3300009089	Vadose Zone Soil	MKKTVISHAAFGCATALLASCVTYLALAQTPPANAAARQTELFKTTMNDVLGRVVTIRRLERDAGTGSGPHRHPGSHTFG
Ga0099827_112322612	3300009090	Vadose Zone Soil	LLASFVTWLALAPESMSLPQARAQTPPANTAARQTQLFKTTMNDVLGREVTIRRLERDAGTG
Ga0099827_119046582	3300009090	Vadose Zone Soil	MKKTITSHAAFGCATALLASCVTYLALAPGSILLSQARAQPSANVGTRQTELFKTTMNDVLGRVVTIRRTERDPGNGSGP
Ga0111539_107733381	3300009094	Populus Rhizosphere	MRTTVISHAAFGCATALLASSATYLALAQPAASTGVRQTELFKTTMNDVLGRVVTVRRTERDPGNGSGPHRHPGSHTIGYVLEGTYE
Ga0111539_120726611	3300009094	Populus Rhizosphere	MRTTVISHAAFGCATALLASSITYLALAQGQPAASTGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGPHRHPGSHTIGYVLEGTYE
Ga0066709_1028700252	3300009137	Grasslands Soil	MNKTIASHAAFGCATALLASFVTYLAYAQAPAANAPARQTELFKTTMNDVLGREVTIRRLERDAG
Ga0099792_104016301	3300009143	Vadose Zone Soil	MKKTIISHAAFGCATALLASFVTWLALAPGSMSLLEAHAQTPPAYTAARQTELFKTTMNDVLGREVTIRRLERDAGTGSGPHRHPGSHTFGYVL
Ga0134088_105607181	3300010304	Grasslands Soil	MKKSIISHAVLGCATALLASFVTWLALAPESMSLPQAHAQTPPANTAARQTQLFKTTMNDVLGREVTIRRLERDAGTGSGPHRHPGSHTFGYVLEGSYEVKV
Ga0134109_100848721	3300010320	Grasslands Soil	MKNSLISHAAFGCATALFASSVTYVTLAGWPEWMSPLQARAQAPANPGTRQTELFRTAMNDVLGRVVT
Ga0134084_102795372	3300010322	Grasslands Soil	MKNSLISHAVFGCATALFASSVTYVTLAGWPEWMSPLQARAQAPANPGTRQTELFRTAMNDVLGRVVTLR
Ga0134086_100634701	3300010323	Grasslands Soil	MKNTVVSHAAFGCATALLASSVTYVTLAGWPEWMSPLQAHAQTPPANAGSRQTELFKTTMNDVLGRVVTLRRTERDPGNGSGPHRHPGSHTFGYV
Ga0134111_100528002	3300010329	Grasslands Soil	MKNSLISHAVFGCATALFASSVTYVTLAGWPEWMSPLQARAQAPANPGTRQTELFRTAMNDVLGRVVTLRRTERDPGNGSGPHRH
Ga0134066_101697102	3300010364	Grasslands Soil	MKNSLISHAAFGCATALLASCVTYVTLAGWPEWMSPLQAHAQAPANPGTRQTELFKTTMNDVLGRVVTLRRTERDPGNGSGPHRHP
Ga0134124_1000174619	3300010397	Terrestrial Soil	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGPHR
Ga0134127_131425622	3300010399	Terrestrial Soil	MRKTVISHVAFGCASALLASSVTYLAQGQPAPSTGLRQTELFKTKMDDVLGRVVTVRRTERDPGNGSARHRHPGSHTIGY
Ga0134122_130210862	3300010400	Terrestrial Soil	VNRFVSHAAFGCATAALASGVTYWALVASPAIPLSMHAHAQTPPAAAGTRQIDLFKTTMTDVLGRVVTIRRTERDPGAGSGPHRHPGSHTFGYVLEG
Ga0137392_100344644	3300011269	Vadose Zone Soil	MKKTVISHAAFGCATALLASCVTYLALAQTPPANTAARQTQLFKTTMNDVLGREVTIRRLERDAGTGSGPHRH
Ga0137393_108878422	3300011271	Vadose Zone Soil	MKKTVISHAAFGCATALLASCATYLAFAQAQPPANAGTRQTELFRTTMNDVLGRVVTIRRTERDPG
Ga0137444_10045011	3300011397	Soil	MKSSILTHAVFGGVTAVLASGATYLALAGWPQSLLPAQAHAQSKPPAGTGARQTELFKTTMNDVMGRVVSIRRFERDPGTGSGPHRHPGSHTLGYVLEGVYE
Ga0137456_10017671	3300011428	Soil	MKTSILSHALIGSVTAVLASGATYVVLTGWPQSLLPAPAHAQSNPPASTGARQTELFKTTMNDVMGRVVSIRRFERDPGTGSGPHRHPGSHTFGYVLEGV
Ga0137389_107295102	3300012096	Vadose Zone Soil	MKKTVITHAAFGCATALLASCATYLALAQTPPANSAARQTELFKTTMDDVLGRVVTIRRLERDAGTG
Ga0137388_108924702	3300012189	Vadose Zone Soil	MKKTVISHAAFGCATALLASCVTYLALAQTPPANAAARQTELFKTTMNDVLGRVVTIRRLERDAGTGSGPHRH
Ga0137365_100927701	3300012201	Vadose Zone Soil	MKKTIISHAVFGCATALLASFVTWLALAPESMSLPQAHAQTPPANTAARQTELFKTTMNDVLGREVTIRRLERDAGTGS
Ga0137381_100326134	3300012207	Vadose Zone Soil	MKKTIISHTVFGCATALLASCATYWAVAGLHESISTLQAYAQTQPPAAGTRQIELFKTTMSDVLGRVVTIRRTE
Ga0137379_117390992	3300012209	Vadose Zone Soil	MKKSIISHAVLGCTTALLASFVTWLALAPESMSLLQAHAQTPRANTAARQTELFKTTMNDVLGREVTIRRLERDAGTGS
Ga0137377_104390331	3300012211	Vadose Zone Soil	MKKSIVSHAVLGCATALLASFVTWLALAPESMSLPQAHAQTPPANTAARQTELFKTTMNDVLGREVTIRRLERDAGTGSSPHRHPGSHTFGYVLEGSYEVKVGDGPL
Ga0137387_109066002	3300012349	Vadose Zone Soil	MKKTVISHTAFGCATALLASCVTYLALAQTQPPANTGTRQTELFRTTMNDVLGRVVTIRRTE
Ga0137386_104496472	3300012351	Vadose Zone Soil	MKKSTISHAAFGCATALVASCVTYLALAPESMSLPQAHAQTPPANTAARQTELFKTTMNDVLGRVVTIRRLERDAGTGSGPHRHPGSHTFGYVLEGSY
Ga0137371_102050041	3300012356	Vadose Zone Soil	MKKPIISHAAFGCATALFASCVTYLALVPESMSLLQAHAQTPPPVNTGARQTELFKTTMNDVLGRV
Ga0137385_101223971	3300012359	Vadose Zone Soil	MKKTVVSHAAFGCATALLASFVTYLALAPESMSLSQARAQTQPPANSGTRQTELFKTTMNDVLGSVVTIRRTERAPGTGSGRHRHPRSPTIGNV
Ga0137385_112214422	3300012359	Vadose Zone Soil	MKKSIISHAVLGCATALLASFVTWLALAPESMSLPQAHAQTPPANTAARQTELFKTTMNDVLGREVTIRRLERDAGTGSGPHRHPGSHTFGYVLEGSY
Ga0137385_113107032	3300012359	Vadose Zone Soil	MKKTVISHAAFGCATALLASCVTYLALAQTQPPANTGTRQTELFRTTMNDVLGRVVTIRRLERDAGTGSGPHRHPGSHTFGYVL
Ga0150984_1163549571	3300012469	Avena Fatua Rhizosphere	MKITVISHAAFGCATALLASSMTYLALAGWPESTSPSTAYAQGQPAGSTGVRQTELFKTTMKDVLGRVVTVRRTERDPGN
Ga0137395_101946124	3300012917	Vadose Zone Soil	MKKTVISHAAFGCSTALLASCVTYLALAQTQAPANSGTRQTELFRTTMNDVLGRVVTLRRTERDAGNGSGP
Ga0137395_108026351	3300012917	Vadose Zone Soil	LHDIGYHFRKEETMKNTVISHAAFGCATALFAFCITYVALAGWPESISLRAHAQAPANPGTRQTELFKTTMNDVLGRVVTL
Ga0137395_113023251	3300012917	Vadose Zone Soil	MKKSIISHAVLGCATALLASFVTWLALAPESMSLPQAHAQTPPANTAARQTQLFKTTMNDVLGREVTIRRLERDAGTGSGPHRHPGSHT
Ga0137413_107764572	3300012924	Vadose Zone Soil	MKNSLISHAAFGCATALFASCVTYVTLAGWPEWMSPSQAHAQAPANPGTRQTELFKTTMNDVLGRVVTLRRTERDPGNGSGPHRHPGSHTFGYVLE
Ga0137419_110246702	3300012925	Vadose Zone Soil	MKKTVVSHAAFGCATALLASCLTYLALAPESMSLPQAHAQAPVNTGSRQTELFKTTMNDVLGRVVTIRRTERDPGNGSGPH
Ga0137419_114105492	3300012925	Vadose Zone Soil	MKQTIISHAAFGCATALLASCFTYLALAPESMSLPQAHAQAPANTGTRQTELFKTTMNDVLGRVVTIRRT
Ga0137404_106565822	3300012929	Vadose Zone Soil	MKNTVVSHAAFGCATAVLASCITYLALAGWPESMSPPQAHAQTPPAANTGARQTELFKTTMSDVLGRVVTIRRTERDPGNGSGPHRHPGSHTFGYVLEG
Ga0137407_117602652	3300012930	Vadose Zone Soil	MKKPIISHAAFGCATALFASCVTYLTLVPESMSLLQAHAQMPPPVNTGARQTELFKTTMNDVLGRVVTIRRTERDPGNGSGPH
Ga0137407_121085022	3300012930	Vadose Zone Soil	MKNTVVSHAAFGCATAVLACCMTYLALAGWPESMSPSQAHAQTPPAANTGARQAELFKTTMSDVLGRVVTIRRTEREPGNGSAAHR
Ga0137410_119979701	3300012944	Vadose Zone Soil	MKKTVVSHAAFGCATALLASFVTYLALAPGSMSPWQAHAQTQPPANTGTRQTELFKTTMNDVLGRVVTIRRTERDPGNGSGPHRHP
Ga0164302_104021491	3300012961	Soil	MNKTIASHAAVGAATALLASVATYVSIAGWPQALVPSQAHAQTPPATGTRQTDLFKTTMSDVLGRVVTIRRTERDPGVGGDPHRHP
Ga0134077_103365992	3300012972	Grasslands Soil	MKSTVVSHAAFGCATALLASSATYVTLAGWPESMSPLQAHAQTPANPGTRQTELFKTTMNDVLGRVVTLRRTERDPGNGSGPHRHP
Ga0164309_102153033	3300012984	Soil	MRTTVISHAAFGCATALLASSATYLALAGWPESMSLSRAHAQSQLGVGIGVHQTELFKKTMKDVLGRVVTIRRTERDIGNGSGP
Ga0157378_107684481	3300013297	Miscanthus Rhizosphere	MNKTIASHAAVGAATALLASAATYVSIVGWPQALVPSQAHAQTPPATGTRQTDLFKTTMSDVLGRVVTIRRTERDPGVGGDPHRHPGSHTFGYVLEGTYEVK
Ga0137412_103496201	3300015242	Vadose Zone Soil	MKKTVISHAAFGCATALLASSVTYLALAQTQPPANAGTRQTELFKTTMNDVLGRMVTIRRTERDPGNASGPHRH
Ga0137409_100299671	3300015245	Vadose Zone Soil	MKKTVITHAAFGCATALLASCVTYLALAQTQPPANTGTRQTELFRTTMDDVLGRVVTIRRTERDPGNGSGPHRH
Ga0137409_104865991	3300015245	Vadose Zone Soil	MKKTVISHAAFGCATALLASCVTYLALAQTQPPANTGTRQTELFRTTMNDVLGRVVTIRRTERDPGNGSGPHRH
Ga0137403_104920411	3300015264	Vadose Zone Soil	MKKTVISHSAFGCATALLACCVTYLALAQTQPPANAGTRQTELFRTTMNDVLGRVVTIRRTERDPGN
Ga0137403_113460852	3300015264	Vadose Zone Soil	MNKAIASHAAFGCATAVLASFVTYLAYAQAPANAPARQTELFKTTMSDVLGREVTIRRLERDAGTG
Ga0134085_100737511	3300015359	Grasslands Soil	MNKTIASHAAFGCATALLASLVTYLAHAQAPANAPARQTELFKKTMSDVLGREVTIRRLERDPGTG
Ga0132257_1028671173	3300015373	Arabidopsis Rhizosphere	MRTTVISHAAFGCATALLASSITYLALAQGQPAASTGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGPHRHPGSHTI
Ga0134069_11643552	3300017654	Grasslands Soil	MKNTVVSHAAFGCATALLASSVTYVTLAGWPEWMSPLQAHAQTPPANAGSRQTELFKTTMNDVLGRVVTLRRTERDPGNG
Ga0134074_13782241	3300017657	Grasslands Soil	MKNTVVSHAAFGCATALLASSVTYVTLAGWPEWMSPLQAHAQTPPANAGSRQTELFKTTMNDVLGRVVTLRRTERDPGNGSGPHRHPGSHTFGYVLEGTYEVKV
Ga0193756_10228291	3300019866	Soil	MKQTIISHAAFGCATALLASCFTYLALAPESMSLPQAHAQAPANTGTRQTELFKTTMNDVLGRVVTIRRTERDPGNGSGPHRHPGRHT
Ga0210380_106047712	3300021082	Groundwater Sediment	MRNTLISHAAFGCATALLASSATYLALAGWPESMSPSRAHAQSQPAASTGVRQTELFKTTMNDVLGRVVTVRRTERDPGNGSGPH
Ga0193699_101813771	3300021363	Soil	MKKTVVSHAAFGCVTALLASFLTWLALVPGSLSLPQAHAQTPPAFTAARQTELFKTTMNDVLGREVTMRRLERDAGTGSGPHRH
Ga0247673_10021911	3300024224	Soil	MRKTVISHVAFGCASALLASSVTYLAQGQPAPSTGLRQTELFKTKMDDVLGRVVTVRRTERDPGNGSAPHRHPGSHTIGYVLEGTYEVK
Ga0247671_10906731	3300024284	Soil	MRKTVLSHAAFGSCTALLAAFLTWLALAGWPPALAPAHAQAQPAAGARQIDLFKTTMNDVMGRVVTIRRTEREPGNGSGPHRHPG
Ga0247660_10287961	3300024317	Soil	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGP
Ga0207697_104443591	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTER
Ga0207684_111181282	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSVISHAVFGGATALLASFLTWLALAPGSLSLLEAHAQTPPANSAARQTELFKTTMNDVLGRVVTIRRTERDPSNGSGAHRHPGSHTF
Ga0207681_108152253	3300025923	Switchgrass Rhizosphere	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGPHRHPGSHTIGYVLEGTYEVKV
Ga0207665_107052663	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGGGPHRHPGSHTIGYVLEGTYEV
Ga0207691_106953901	3300025940	Miscanthus Rhizosphere	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSAPHR
Ga0207677_100744321	3300026023	Miscanthus Rhizosphere	MNKTIASHAAVGAATALLASVATYVSIAGWPQALVPSQAHAQTPPATGTRQTDLFKTTMSDVLGRVVTIRRTERDPGVGGDPHRHPGSHTFGY
Ga0207639_103763984	3300026041	Corn Rhizosphere	MRTTVISHAAFGCATALLASSVTYLALAQGQPAGSGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGGRTATRAAIRSATCSKEPTR
Ga0207676_101019935	3300026095	Switchgrass Rhizosphere	MNKTIASHAAVGAATALLASVATYVSIAGWPQALVPSQAHAQTPPATGTRQTDLFKTTMSDVLGRVVTIRRTERDPGVGGDPHR
Ga0209131_12631722	3300026320	Grasslands Soil	MKKTVISHAAFGCSTALLACCVTYLALAQTPPPANSGTRQTELFRTTMNDVLDRVVTIRRTERDPGNG
Ga0209158_11466521	3300026333	Soil	MKKSTLSHAAFGCATALLASCVTYLALAPESMSLPQAHAQTPPANTAARQTELFKTTMNDVLGRVVTLRRLERDAGTGSG
Ga0209056_100964513	3300026538	Soil	MKKSVISHAVFGGATALLASFVTWLALAAGSMSLLEAHAQTPPANTAARQTELFKTTMNDVLGRVVTIRRLERDAGTGSGPH
Ga0209161_103705612	3300026548	Soil	MKKSVISHAVFGGATALLASFVTWLALAAGSMSLLEAHAQTPPANTAARQTELFKTTMNDVLGRVVTIR
Ga0209283_105659262	3300027875	Vadose Zone Soil	MKKAVISHAAFGCATALLASCVSYLALAQTQPPANTGTRQTELFRTTMNDVLGRVVTIRRTERDP
Ga0209590_106338572	3300027882	Vadose Zone Soil	MKKSIISHAVLGCATALLASFVTWLALAPESMSLPQAHAQTPPANTAARQTELFKTTMNDVLGREVTIRRLERDAGTGSGPHRHPGSHTFGYVIEGSY
Ga0209590_110498752	3300027882	Vadose Zone Soil	MKKSVISHAVFGGATALLASFVTWLALAPGSMSLLEAHAQTPPANTAARQAELFKTTMNDVLGRVVTIRRLERDAGTGSGPHRHPGSHTFGYVLE
Ga0209488_104149842	3300027903	Vadose Zone Soil	MKKSVISHAVLACATALLASFLTWLALAPGSMSLLEAHAQTTPANTAARQTELFKTTMNDVLGRVVTIRRTE
Ga0268265_107522351	3300028380	Switchgrass Rhizosphere	MRNTLISHAAVGCATAILASAATWLALAQSQPAPNSGLRQTELFKTTMKDVLGRVVTIRRTERDPGNGSGPHRHPGSHTFGYVLEGSYE
Ga0137415_102676421	3300028536	Vadose Zone Soil	MKKTVISHAAFGCATALLASFVTWLALAPGSMSLLEAHAQTPPAYTAARQTELFKTTMNDVLGREVTIRRLERDAGTGSGPHRHPGSHTF
Ga0137415_106593501	3300028536	Vadose Zone Soil	MKKTVVSHVAFGCATALLSSCVTYLALAPESMSLPRAHAQAPANTGTRQTELFKTTMNDVLGRVVTIRRLERDAGTGSGPHRHPGSHTF
Ga0307302_101957221	3300028814	Soil	MKNTVISHAAFGCATALLASCVTYVTLAGWPESMSPLQAHAQTPPANAGTRQTELFKTAMNDVLGRVVTLRRTE
Ga0307497_101196242	3300031226	Soil	MNNSIASHAAFGCATALLASFVTYLAYAQAPAANAPARQTELFKTTMSDVLGREVTIRRLERDAGTGSGPHRHPGSHTFGYVLEG
Ga0307469_103499862	3300031720	Hardwood Forest Soil	MKNTVISHAASGCATALLASSVTYVTLAGWPESMSPLQAHAQTPPANTGTRQTELFKTAMNDVLGRVVTIRRTERDPGNGSGPHRHPGSHTFGYVL
Ga0307469_107755971	3300031720	Hardwood Forest Soil	MKKTVISHAAFGCAAALLASCVTYLALAQTQLPANTGTRQTELFRTTMNDVLGRVVTIRRTERDPGNGS
Ga0307407_107737012	3300031903	Rhizosphere	MKALIASHAITALLASIATYCVFVGSASAPLMQAHAQAPAPAAGTRQIELFKTTMNDVMGRVVTIRRTERDPGVGTGPHRHPGSHTFGYVL
Ga0307412_101891311	3300031911	Rhizosphere	MKALIASHAITALLASIATYCVFVGSASAPLMQAHAQAPAPAAGTRQIELFKTTMNDVMGRVVTIRRTERDPGSGTGPHRHPGSHTFGYVLEGTYEIKV
Ga0310899_103928323	3300032017	Soil	MRTTVISHAAFGCATALLASSITYLALAQGQPAASTGVRQTELFKTTMDDVLGRVVTVRRTERDPGNGSGPHRHPGSHTIG
Ga0307415_1001838401	3300032126	Rhizosphere	MKALIASHAITALLASIATYCVFVGSASAPLMQAHAQAPAPAAGTRQIELFKTTMNDVMGRVVTIRRTERDPGVGTGPHRHPGSHTFGYVLEGT
Ga0307470_112696511	3300032174	Hardwood Forest Soil	MKKTVVSHAALGCATALLASFATWLALAPGSMSLLEAHAQTPAAYTAARQTELFKTTMNDVLGRVVTIRRTERDPGNGSAPHRHPGSHTLGYVIE
Ga0307471_1005559771	3300032180	Hardwood Forest Soil	MKKTVVSHAAFGCATALLASGVTYVALAGWPEWMSAPQAHAQAPANPGTRQTELFKTAMNDVLGRVVTLRRIERDPGNGSGPHRHPGSHTLGYVLEGSY
Ga0307471_1011157731	3300032180	Hardwood Forest Soil	MKSTFISHAVFGCATALLASGVTYVTLAGWPDAMSLKAHAQTPPANTGTRQTELFKTTMNDVLGRVVTLRRTERDPGNGSGPHRHPGSHTFGYVLEGT
Ga0326726_110201362	3300033433	Peat Soil	MNHTIVSHAATALLASTATWLALAPESPWLSKAHAQAPAANAPARQTELFKTTMNDVLGREVTLRRLERDGGTGSGPHRHPGSHTFGYVLEGTYEVK
Ga0364941_017094_2_220	3300034417	Sediment	MRNTLISHAAFGCATALLASSATYLALAGWPESMSPSRAHAQSQPAASTGVRQTELFKTTMNDVLGRVVTVRR
Ga0373959_0018195_1068_1319	3300034820	Rhizosphere Soil	MRSTVISHAAFGCVTALLASTATYLALAQPAASTGVRQTELFKTTMNDVLGRVVTVRRNERDPGNVSGPHRHPGSHTIGHVLEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059393

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences