Metagenome / Metatranscriptome Family F059378

Basic Information
Family ID	F059378
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	47 residues
Representative Sequence	MKKVNRFLAALALGLFFVGIAAADTLELKDGRVLKGKYLGGTQAV
Number of Associated Samples	100
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.50 %
% of genes near scaffold ends (potentially truncated)	96.27 %
% of genes from short scaffolds (< 2000 bps)	88.06 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (91.045 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (44.776 % of family members)
Environment Ontology (ENVO)	Unclassified (42.537 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.015 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1JGI25385J37094_100900351 2JGI25383J37093_100149673 3JGI25383J37093_101102162 4JGI25617J43924_100054441 5JGI25617J43924_100081241 6JGI25617J43924_100713032 7JGI25616J43925_103157811 8JGIcombinedJ51221_104072982 9Ga0062595_1012365121 10Ga0066683_104372283 11Ga0066679_100762951 12Ga0070711_1000176021 13Ga0066682_100700521 14Ga0070733_101043123 15Ga0066704_101384671 16Ga0066693_100833592 17Ga0066703_107780972 18Ga0066691_101202243 19Ga0070764_110657041 20Ga0066903_1050207352 21Ga0066903_1080674991 22Ga0070717_104210452 23Ga0070715_109300301 24Ga0075018_108368541 25Ga0066665_114101491 26Ga0066665_114602722 27Ga0066659_117005522 28Ga0099793_102433401 29Ga0099793_106890111 30Ga0066710_1033009391 31Ga0066710_1046302491 32Ga0099829_104496691 33Ga0099829_106302931 34Ga0099830_114391821 35Ga0099828_104272831 36Ga0099828_106035031 37Ga0099828_106339131 38Ga0099792_108231341 39Ga0099792_109289391 40Ga0099796_105749741 41Ga0126372_127831331 42Ga0134123_101350243 43Ga0137393_105204041 44Ga0137393_116734681 45Ga0137389_106710541 46Ga0137388_108219321 47Ga0137383_106553741 48Ga0137382_104519982 49Ga0137382_107996621 50Ga0137382_111548492 51Ga0137365_106829581 52Ga0137363_101010711 53Ga0137363_103581121 54Ga0137363_106781881 55Ga0137363_116664622 56Ga0137399_100519492 57Ga0137399_117452802 58Ga0137380_110311592 59Ga0137381_101320922 60Ga0137381_103491631 61Ga0137378_101896983 62Ga0137370_106091052 63Ga0137370_107591992 64Ga0137387_103631771 65Ga0137384_102622353 66Ga0137385_113511011 67Ga0137360_109776471 68Ga0137360_111176652 69Ga0137360_114386641 70Ga0137361_106088021 71Ga0137358_103241381 72Ga0137398_106759151 73Ga0137398_109326452 74Ga0137397_103658211 75Ga0137359_108887171 76Ga0137419_110941201 77Ga0137416_106616142 78Ga0137416_114671351 79Ga0137416_114952592 80Ga0137404_107989741 81Ga0164301_112336122 82Ga0153916_110987551 83Ga0126369_124692471 84Ga0187766_112055881 85Ga0066655_105501141 86Ga0193726_12581741 87Ga0210407_111713851 88Ga0210407_114330342 89Ga0210403_101582861 90Ga0210403_114817561 91Ga0210399_103600531 92Ga0210401_111077101 93Ga0210404_101084642 94Ga0210404_103180662 95Ga0210404_106780981 96Ga0210406_113863501 97Ga0210393_107555071 98Ga0247667_10069951 99Ga0247667_10901792 100Ga0137417_11560391 101Ga0137417_11898892 102Ga0137417_14795911 103Ga0209688_10335931 104Ga0209239_10760622 105Ga0209267_10136674 106Ga0209158_10095804 107Ga0209804_12576942 108Ga0257172_10131631 109Ga0257181_10585781 110Ga0209378_10558801 111Ga0209648_106364972 112Ga0179593_11133617 113Ga0179587_101041523 114Ga0209730_10335832 115Ga0208983_10103962 116Ga0209076_11849462 117Ga0209388_11685432 118Ga0209118_11441621 119Ga0209180_103605461 120Ga0209517_106920421 121Ga0209169_107130191 122Ga0209590_104554333 123Ga0209488_104309821 124Ga0209488_109582431 125Ga0209698_100224921 126Ga0265765_10003491 127Ga0170818_1017055651 128Ga0307469_107697681 129Ga0307475_103250111 130Ga0307473_108556622 131Ga0307478_107252441 132Ga0307479_119107962 133Ga0307479_121059001 134Ga0307471_1003191451
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1JGI25385J37094_100900351 2JGI25383J37093_101102162 3JGI25617J43924_100054441 4JGI25617J43924_100081241 5JGIcombinedJ51221_104072982 6Ga0062595_1012365121 7Ga0066683_104372283 8Ga0066679_100762951 9Ga0070711_1000176021 10Ga0066704_101384671 11Ga0066693_100833592 12Ga0066703_107780972 13Ga0070764_110657041 14Ga0066903_1050207352 15Ga0075018_108368541 16Ga0066665_114602722 17Ga0066710_1033009391 18Ga0066710_1046302491 19Ga0099829_104496691 20Ga0099828_106035031 21Ga0126372_127831331 22Ga0137393_105204041 23Ga0137393_116734681 24Ga0137382_104519982 25Ga0137382_111548492 26Ga0137399_100519492 27Ga0137381_103491631 28Ga0137385_113511011 29Ga0137359_108887171 30Ga0137416_106616142 31Ga0137404_107989741 32Ga0066655_105501141 33Ga0193726_12581741 34Ga0210407_114330342 35Ga0210401_111077101 36Ga0210404_106780981 37Ga0210406_113863501 38Ga0247667_10901792 39Ga0209239_10760622 40Ga0209158_10095804 41Ga0209648_106364972 42Ga0179593_11133617 43Ga0209118_11441621 44Ga0209517_106920421 45Ga0209698_100224921 46Ga0265765_10003491 47Ga0307473_108556622 48Ga0307478_107252441 49Ga0307471_1003191451
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44. 1Ga0137360_114386641 2JGI25385J37094_100900351 3JGI25617J43924_100054441 4JGI25617J43924_100081241 5JGI25616J43925_103157811 6JGIcombinedJ51221_104072982 7Ga0062595_1012365121 8Ga0066679_100762951 9Ga0066682_100700521 10Ga0070764_110657041 11Ga0066903_1080674991 12Ga0070717_104210452 13Ga0070715_109300301 14Ga0075018_108368541 15Ga0066665_114602722 16Ga0099793_102433401 17Ga0099793_106890111 18Ga0066710_1033009391 19Ga0099829_104496691 20Ga0099830_114391821 21Ga0099828_106035031 22Ga0099828_106339131 23Ga0099792_108231341 24Ga0099792_109289391 25Ga0099796_105749741 26Ga0126372_127831331 27Ga0137393_105204041 28Ga0137393_116734681 29Ga0137382_111548492 30Ga0137363_116664622 31Ga0137381_103491631 32Ga0137384_102622353 33Ga0137360_111176652 34Ga0137398_109326452 35Ga0137397_103658211 36Ga0137359_108887171 37Ga0137416_106616142 38Ga0137404_107989741 39Ga0164301_112336122 40Ga0153916_110987551 41Ga0187766_112055881 42Ga0066655_105501141 43Ga0193726_12581741 44Ga0210407_114330342 45Ga0210403_101582861 46Ga0210401_111077101 47Ga0210404_101084642 48Ga0210404_106780981 49Ga0210406_113863501 50Ga0247667_10069951 51Ga0209267_10136674 52Ga0209804_12576942 53Ga0257172_10131631 54Ga0179593_11133617 55Ga0209118_11441621 56Ga0209517_106920421 57Ga0209698_100224921 58Ga0265765_10003491 59Ga0307473_108556622 60Ga0307478_107252441 61Ga0307479_119107962 62Ga0307479_121059001 63Ga0307471_1003191451
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.36% β-sheet: 0.00% Coil/Unstructured: 61.64%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF13354	Beta-lactamase2	17.16
PF00486	Trans_reg_C	9.70
PF13668	Ferritin_2	6.72
PF05235	CHAD	1.49
PF02837	Glyco_hydro_2_N	1.49
PF02706	Wzz	0.75
PF01381	HTH_3	0.75
PF00703	Glyco_hydro_2	0.75
PF08388	GIIM	0.75
PF13419	HAD_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	2.24
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	1.49
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	1.49
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.04 %
Unclassified	root	N/A	8.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.04 %
Unclassified	root	N/A	8.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.04 %
Unclassified	root	N/A	8.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.73 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.75 %
Unclassified	root	N/A	8.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.70 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.75 %
Unclassified	root	N/A	8.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.42 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.96 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.75 %
Leptospirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales	0.75 %
Unclassified	root	N/A	8.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.96 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.75 %
Leptospiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae	0.75 %
Unclassified	root	N/A	8.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.42 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.49 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	4.48 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.75 %
Leptonema	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptonema	0.75 %
Unclassified	root	N/A	8.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.42 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.75 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	4.48 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.75 %
Leptonema illini	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptonema → Leptonema illini	0.75 %
Unclassified	root	N/A	8.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.42 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.75 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	4.48 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.75 %
Leptonema illini	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptonema → Leptonema illini	0.75 %
Unclassified	root	N/A	8.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.73 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10090035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	931	Open in IMG/M
3300002560\|JGI25383J37093_10014967	All Organisms → cellular organisms → Bacteria	2572	Open in IMG/M
3300002560\|JGI25383J37093_10110216	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300002914\|JGI25617J43924_10005444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3875	Open in IMG/M
3300002914\|JGI25617J43924_10008124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3337	Open in IMG/M
3300002914\|JGI25617J43924_10071303	Not Available	1270	Open in IMG/M
3300002917\|JGI25616J43925_10315781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300003505\|JGIcombinedJ51221_10407298	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300004479\|Ga0062595_101236512	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005172\|Ga0066683_10437228	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M

Showing 1 to 10 of 133 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.24%
Terrestrial	Environmental → Terrestrial	97.76%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Sediment	Environmental → Aquatic → Sediment	1.49%
Soil	Environmental → Terrestrial → Soil	97.76%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	8.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.22%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	44.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.49%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M

Showing 1 to 10 of 100 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100900351	3300002558	Grasslands Soil	MKSVNRFLVAVALGLFFVGAVAADTLELKDGRVLKGKYLGGTQAVL
JGI25383J37093_100149673	3300002560	Grasslands Soil	MKSLNRFLVAVVLGLFFVGAAAADTLELRDGRVLKGKYLGGTQAVLRFEING
JGI25383J37093_101102162	3300002560	Grasslands Soil	MVNVNRLFASIVLGLFFVGAAAADTLELKNGKVLQGKYLGG
JGI25617J43924_100054441	3300002914	Grasslands Soil	MKPLGRFVATATLGLLFVGAAVADTLELKDGRVLQGRYLGGTAAVLRFEQHGNVETF
JGI25617J43924_100081241	3300002914	Grasslands Soil	MNKVNRFMSSVALALLFVGTGAADTLELKDGRVLKGKYLGGTQ
JGI25617J43924_100713032	3300002914	Grasslands Soil	MNKANRFMSAVALALLFVGTGAADTLELKDGRVLKGKYLGGTQ
JGI25616J43925_103157811	3300002917	Grasslands Soil	MNRVNRFISAVVLALFFAGAATADTLELKDGRVLKGKYLGGTQAVL
JGIcombinedJ51221_104072982	3300003505	Forest Soil	MNRWNRFVVAAVLGLLFVGVAAADTLELKDGRVLQGKYLGGTQAVLRFE
Ga0062595_1012365121	3300004479	Soil	MTRFSRTRILRTIAATAVGLLFAGAAMADSLELKDGRVLTGRFLGGTQALMRFSV
Ga0066683_104372283	3300005172	Soil	MNKIHRFLAAAALGLFFVGVAAADTLELRDGRVLKGKYLGGTQAVLRFEVSGEVQAFNTN
Ga0066679_100762951	3300005176	Soil	MKRVNHFLAPVLVGLFFVGLAAADTLELKDGRVLKGKYLG
Ga0070711_1000176021	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLARSVAVVALGLFFAGAAVADTLELKDGRVITGRFLGGTQALVRFSIQGEV
Ga0066682_100700521	3300005450	Soil	MNRANRFLSAVALGLFFVGAATADTLELKDGRILKGKYLGGTQAVLRFELNGEVQTFSTT
Ga0070733_101043123	3300005541	Surface Soil	MTRFSRTRILRTIVATAAGLLFTGAAMADTLELKDGRVLTGRFLGGTQALMRFSV
Ga0066704_101384671	3300005557	Soil	MLAHHLERGITMKRFVRFVATAALGLAFVAVAAADTLELKDGRVLQGRYLGGTQA
Ga0066693_100833592	3300005566	Soil	MNRANRFLSAVALGLFFVGAATADTLELKDGRILKGK
Ga0066703_107780972	3300005568	Soil	MRKWNPFLAVMALGLFMAGAATADTLELKDGRVLK
Ga0066691_101202243	3300005586	Soil	MRKLNRFLAVMGLGLFMVAAATADTLELKDGRVLKGK
Ga0070764_110657041	3300005712	Soil	MNGRGRTIAAVAMGLFFAGAAAADTLELKDGRVLQGRYLGGTQAVLRFEIKGEV
Ga0066903_1050207352	3300005764	Tropical Forest Soil	MRNVNRYLATIALALFSVGAASADTLELKSGKVVQGRYLGGTQAVIRFEVNGEVQ
Ga0066903_1080674991	3300005764	Tropical Forest Soil	MRNVNRYLVAIALALFSVGAAAADTLELKTGKVVQGRYLGGTQAVLRFEVNGEVQ
Ga0070717_104210452	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLARSVAVVALGLFFAGAAVADTLELKDGRVITGRFLGGTQALVRFS
Ga0070715_109300301	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKRFLRFVATAALGLLFAGVASADTLELKDGRVLQGRYLGGTQAVLR
Ga0075018_108368541	3300006172	Watersheds	MKTVNRFLSVFALALFFVSAAAADTLELKDGRILKGKYLGGTQAVLRFELNGEVQTFNT
Ga0066665_114101491	3300006796	Soil	MKSVNRFLVAVVLGMFFAGAAAADTLELRDGRVLKGKYLGGT*
Ga0066665_114602722	3300006796	Soil	MTRFIRSLAAAALGILFLAGVAAADTLELKDGRVVQGRFLGGTQALVRFSVNGQV
Ga0066659_117005522	3300006797	Soil	MKRVKHFLAAVLLGLFFVGVAAADTLELKDGRVLKGKYLGG
Ga0099793_102433401	3300007258	Vadose Zone Soil	MSKRNRFLTAAVLALFFVGMAAADTLELKDGRVLRGKYLGGTQAVLR
Ga0099793_106890111	3300007258	Vadose Zone Soil	MKSVNRFLVAVVLAIFFAGAATADTLELRDGRVLKGKYLGGTQAVLRF
Ga0066710_1033009391	3300009012	Grasslands Soil	MNRVSRFLGTVALGLLFVAAAGADTLELKDGRVLKGRYLGGTQAVLRFEINGEV
Ga0066710_1046302491	3300009012	Grasslands Soil	MSKRNRFLTAAVLALFFVGMAAADTLELKDGRVLRGKY
Ga0099829_104496691	3300009038	Vadose Zone Soil	MKGIAKVFFVATLALLFGGGVPADTLELKDGRVLHGRYLGGTQ
Ga0099829_106302931	3300009038	Vadose Zone Soil	MKKVNRFLAALALGLFFVGIAAADTLELKDGRVLKGKYLGGTQ
Ga0099830_114391821	3300009088	Vadose Zone Soil	MKRFARFVATAALGLLFVAIAAADTLELRDGRVLQGRYLGGTQAVLRFEINGNVEA
Ga0099828_104272831	3300009089	Vadose Zone Soil	MNKVNRFLAAVALSLFFVGVAAADTLELRDGRVLKGKYLGGTQAVL
Ga0099828_106035031	3300009089	Vadose Zone Soil	LVTVALGLFFAGTVTADTLELKDGRVLRGKYLGGTQA
Ga0099828_106339131	3300009089	Vadose Zone Soil	MKSVKRFLVAVTLGLLFVGVAAADTLELRDGRVLKGKYLGGTQAVLRFETSGEVQT
Ga0099792_108231341	3300009143	Vadose Zone Soil	MNRVTRFLAAVLLGLFFVGAAGADTLELKDGRVLKGKYLGGTQAVL
Ga0099792_109289391	3300009143	Vadose Zone Soil	MKTVKQFLTMFALGLFFLGTAAADTLELKDGKVLKGKYLGGTQAVLR
Ga0099796_105749741	3300010159	Vadose Zone Soil	MKRVSRYLAAIALGLFAVGAVTADTLELKDGRVLKGKYLGGTQAVM
Ga0126372_127831331	3300010360	Tropical Forest Soil	MNRFVRSVAATAMGLLFAGAAMADSLELKDGRVLVGRFLGGTQALM
Ga0134123_101350243	3300010403	Terrestrial Soil	MIMTRFTRSLGAAALGLLFFAGLAAADTLELKDGRVVQGRFLGGTQALVRFSVNGQVQT
Ga0137393_105204041	3300011271	Vadose Zone Soil	MKSVNRFLSVFAMGLFLVGAAAADTLELKDGRVLKGKY
Ga0137393_116734681	3300011271	Vadose Zone Soil	MSKFYRFLAVLALGLFYVGTAGADTLELRDGRVLKGRYLGGTQAVMRFEVNGEVQTFNTTDIVA
Ga0137389_106710541	3300012096	Vadose Zone Soil	MNKVNRFLVALALGLFFVGIAAADTLELKDGRVLKGKYLGGTQAV
Ga0137388_108219321	3300012189	Vadose Zone Soil	MNKVNRFLVALALGLFFVGIAAADTLELKDGRVLKGKY
Ga0137383_106553741	3300012199	Vadose Zone Soil	MNKIYRFLAAVALGLFFVGVAAADTLELRDGRVLKGK
Ga0137382_104519982	3300012200	Vadose Zone Soil	MRKLNRLLAVMGLGLFMVAAATADTIELKDGRVLKGKY
Ga0137382_107996621	3300012200	Vadose Zone Soil	MKRVKDFLAAVLLGLFFVGVAAADTLELKDGRVLKGKYLGGTQ
Ga0137382_111548492	3300012200	Vadose Zone Soil	MKRFVRFVSTAAIVLLFVTIAAADTLELRDGRVLEGRYLGGTQAVLRFQVEGNIQTFNVNDVVA
Ga0137365_106829581	3300012201	Vadose Zone Soil	MKSVNRFLVAVVLGMFFAGAAAADTLELRDGRVLKGKYLGGTQAVLRFEIN
Ga0137363_101010711	3300012202	Vadose Zone Soil	MKKVNRFLAALALGLFFVGIAAADTLELKDGRVLKGKYLGGT
Ga0137363_103581121	3300012202	Vadose Zone Soil	MSKFYRFLAVLALGLFYVGTAGADTLELRDGRVLKGRYLGGTQAVMRFEVNGEVQTFNTTDIV
Ga0137363_106781881	3300012202	Vadose Zone Soil	MKNFPRILAAAALGLSLVGAAAADTLELKDGRVLQGHYLGGTQAVL
Ga0137363_116664622	3300012202	Vadose Zone Soil	MKNFARILAAAALGLSLVGAAAADTLELKDGRVLQGHYLGGTQAVL
Ga0137399_100519492	3300012203	Vadose Zone Soil	MKRVSRFLAAIALGLFLAGAATADTLELKDGRVLKGKYLGG
Ga0137399_117452802	3300012203	Vadose Zone Soil	MSKWNRFLTAAVLALFFAGMAAADTLELKDGRVLRGKYLGGTQ
Ga0137380_110311592	3300012206	Vadose Zone Soil	MNKIYRFLAAVALGLFFVGVAAADTLELKDGRVLKGKYLGGTQAVLRFEVSGE
Ga0137381_101320922	3300012207	Vadose Zone Soil	MKTVKQFLTMFALGLFFLGTAVADTLELKDGKVLKGKYLGGTQAVLRFELNGEVQTF
Ga0137381_103491631	3300012207	Vadose Zone Soil	MGEGAMGNVNRLFASIVLGLFFVGVAAADTLELKSGKVVQGKYLGGTQAVLRFEVN
Ga0137378_101896983	3300012210	Vadose Zone Soil	MKRLNRFLAAALLGLLFVSVAAADTLELKDGRVLKGKYLGGTQA
Ga0137370_106091052	3300012285	Vadose Zone Soil	MNRANRFLSAVALGLFFVGAATADTLELKDGRILKGKYLGGTQAVLRFEQ
Ga0137370_107591992	3300012285	Vadose Zone Soil	MNRANRFLSALALGLFFVGAATADTLELKDGRILKGKYLGGTQAVLRFELNG
Ga0137387_103631771	3300012349	Vadose Zone Soil	MNRVNRFLSAVALGLFFVGAATADTLELKDGRILRGKYL
Ga0137384_102622353	3300012357	Vadose Zone Soil	MNKIYRFLAAVALGLFFVGVAAADTLELRDGRVLKGKYLGGTQAVLRFEVSGEVQA
Ga0137385_113511011	3300012359	Vadose Zone Soil	MFALGLFFLGTAAADTLELKDGKVLKGKYLGGTQAVLRFELNGE
Ga0137360_109776471	3300012361	Vadose Zone Soil	MKKVNRFLVALALGLFFVGIAAADTLELKDGRVLKGKYLGGTQA
Ga0137360_111176652	3300012361	Vadose Zone Soil	MKRVNRFLAAALLGLFFVSVAAADTLELKDGRVLKGKYLGGTQAVLRFE
Ga0137360_114386641	3300012361	Vadose Zone Soil	MKKVNRFLAALALGLFFVGIAAADTLELKDGRVLKGKYLGGTQAV
Ga0137361_106088021	3300012362	Vadose Zone Soil	MKKVNRFLVALALGLFFVGIAAADTLELKDGRVLKGK
Ga0137358_103241381	3300012582	Vadose Zone Soil	MSKWNRLLTAAVLAVFFAGMAAADTLELKDGRVVRGKYLGGTQ
Ga0137398_106759151	3300012683	Vadose Zone Soil	MNRVNRFISAVVLALFFAGAATADTLELKDGRVLKGKYLVGT
Ga0137398_109326452	3300012683	Vadose Zone Soil	MKTVNRFLGAVVLGLFFVGAAAADTLELRDGRVLKGKYLGGTQAVLRFEINGEVQTFNTT
Ga0137397_103658211	3300012685	Vadose Zone Soil	MKRVSRFLAAIALGLFLAGAATADTLELKDGRVLKGKY
Ga0137359_108887171	3300012923	Vadose Zone Soil	MSKWNRLLTAAVLALFFAGMASADTLELKDGRVVHGKYLGGTQA
Ga0137419_110941201	3300012925	Vadose Zone Soil	MNRVNRFFSAVALGLFFVGAATADTLELKDGRILKGKYLGGTQA
Ga0137416_106616142	3300012927	Vadose Zone Soil	MNRVNRFFSAVALGLFFVGAATADTLELKDARVLRGTYPGGTLAVLRLELNGE
Ga0137416_114671351	3300012927	Vadose Zone Soil	MKRVNRFLTAALLGLFFVSVAAADTLELKDGRVLKGKYLGGTQAVL
Ga0137416_114952592	3300012927	Vadose Zone Soil	MKRVNCFLAAALLGLFFVSVAAADTLELKDGRVLKGKYLGGT
Ga0137404_107989741	3300012929	Vadose Zone Soil	MKSVKSILTLFTLGLFFAGPVSADTLELKDGRVLKGRY
Ga0164301_112336122	3300012960	Soil	MSKGKRFLTAAALGLLLVGIASADTLELKDGRVVHGKYLGGTQV
Ga0153916_110987551	3300012964	Freshwater Wetlands	MSKVNRLLSAMALGLLFVGVAAADTLELKTGRVLQGKYLGGTQAVLRFEV
Ga0126369_124692471	3300012971	Tropical Forest Soil	MRNVNRYLAAIALALFSVGAAAADTLELKTGKVVQGRYLGGTQAVLRFEVNGEVQTFSTNDV
Ga0187766_112055881	3300018058	Tropical Peatland	MTRFTRFFTAAALGVLFVGVAAADTLELKDGRVVQGRYLGGTQALVRFS
Ga0066655_105501141	3300018431	Grasslands Soil	MTRLTRFIAAAALGVLFFAGVAAADTLELKDGRVVQGRFLGGTQAL
Ga0193726_12581741	3300020021	Soil	MTRFTRPIAATALGLLFAGAAMADTLELKDGRLLTGRFLGGTQAMMRFSVNGEVQTYNV
Ga0210407_111713851	3300020579	Soil	MKSVNRFLTAIAIGLFLVGAAAADTLELKDGRVLK
Ga0210407_114330342	3300020579	Soil	MKRFSRFVATAALGLLGVTTAAADTLELKDGRVLEGRYLGGTQAV
Ga0210403_101582861	3300020580	Soil	MKSVNRFLTAIAIGLFLVGAAAADTLELKDGRVLKGRYLGGTQVVLRFE
Ga0210403_114817561	3300020580	Soil	MNGRGRTIAAVALGLFFACAAAADTLELKDGRVLEGRYLGGTQAVLRFEIK
Ga0210399_103600531	3300020581	Soil	MNKVNRFLAAMALMLFYAGAASADTLELKDGRVLKGKYL
Ga0210401_111077101	3300020583	Soil	MKKWNSFLAVGVLGLIIAGGASADTLEFKDGRVLAGRYLGGTQAVIRFEVN
Ga0210404_101084642	3300021088	Soil	MKRLGRFIATAALGLLFVGGAAADTLELKDGRVLQGRYLGGTQAVLRFEQ
Ga0210404_103180662	3300021088	Soil	MKPLGRFVATAALGLLFVSAAVADTLELKDGRVLQGRYLGGTAAVLR
Ga0210404_106780981	3300021088	Soil	MKRVGHFLAALALALFFVGAASADTLELKDGRVLKGKYLGGTQAVLRFEIN
Ga0210406_113863501	3300021168	Soil	MNKWNRVLFVAALSLLLAAAAAADTLELRDGRVLQGRYLGGTRAVLRFEVDGAVQTFSTNDIVA
Ga0210393_107555071	3300021401	Soil	MTRFARSIAATALGLLFAGAAMADTLELKDGRLLTGRFLGGTQALMRFSVNG
Ga0247667_10069951	3300024290	Soil	MKSRGRMIAAVVLGLLFVSAAAADTLELRDGRVLHGRYLGGTQAVLRFEIRGEV
Ga0247667_10901792	3300024290	Soil	MKSRGRMIVAVVLGLLFASAAAADTLELRDGRVLHGRYLGGTQAVLRFEINGQVQTFNV
Ga0137417_11560391	3300024330	Vadose Zone Soil	MNRVNRFLSAVALALFFVGAAAADTLELKDGRVLKGKYLGGTQAVLRFFELNG
Ga0137417_11898892	3300024330	Vadose Zone Soil	MNRVNRFLSAVALALFFVGAAAADTLELKDGRVLKGKYLGGTQAVL
Ga0137417_14795911	3300024330	Vadose Zone Soil	MNRWNRLLTAAVLALFFAGMAAADTLELKDGRVVHGKYLG
Ga0209688_10335931	3300026305	Soil	MNRANRFLSAVALGLFFVGAATADTLELKDGRILKGKYLG
Ga0209239_10760622	3300026310	Grasslands Soil	VFCEICDCEGTMNRANRFLSAVALGLFFVGAATADTLELKDGRILKGKYLGGTQAVL
Ga0209267_10136674	3300026331	Soil	MRKLNRFLAVMGLGLFMVAAATADTLELKDGRVLKGKYLGGTQAVMRF
Ga0209158_10095804	3300026333	Soil	MRKLNRFLAVMGLGLFMVAAATADTLELKDGRVLKGKYLGGTQAVMRFE
Ga0209804_12576942	3300026335	Soil	MRKWNPFLAVMALGLFMAGAATADTLELKDGRVLKG
Ga0257172_10131631	3300026482	Soil	MNRVNRFLTAVAVGLFLVGTAAADTLELKDGRVLKGKYLGGTQAVLRFEI
Ga0257181_10585781	3300026499	Soil	MKPLGRFVATAALGLLFVSAAVADTLELKDGRVLQGRYLGGTAAVLRFEQH
Ga0209378_10558801	3300026528	Soil	VFCEICDCEGTMNRANRFLSAVALGLFFVGAATADTLELKDGRILKGKYLGGTQAVLRFELNGE
Ga0209648_106364972	3300026551	Grasslands Soil	MNKIYRFMAAVALGLFFVGVAAADTLELKDGRVLKGKYL
Ga0179593_11133617	3300026555	Vadose Zone Soil	MKRVSRFLAAIASDSSLRALATADTLELKYGRVLKGKYLGGTQAVLRCRAERRGSGF
Ga0179587_101041523	3300026557	Vadose Zone Soil	MKSVNRFLVAVVLGMFIAGAAAADTLELRDGRVLKGKYLGGTQAVL
Ga0209730_10335832	3300027034	Forest Soil	MKLFGRFVATAALGLLFVGAAVADTLELKDGRVLQGRYLGGTAAVLRFEQHGNVETFN
Ga0208983_10103962	3300027381	Forest Soil	MNRVNRFISAVVLALFFAGAATADTLELKDGRILKGKYLGGTQAV
Ga0209076_11849462	3300027643	Vadose Zone Soil	MKTVNRFLGAVVLGLFFVGAAAADTLELRDGRVLKGKYLGGTQAVLRFEIN
Ga0209388_11685432	3300027655	Vadose Zone Soil	MKTVNRFLGAVVLGLFFVGAAAADTLELRDGRVLKGKYLGGTQ
Ga0209118_11441621	3300027674	Forest Soil	MKRWNRLLTAIVLSLSLAGLAAADTLELKDGRVLRG
Ga0209180_103605461	3300027846	Vadose Zone Soil	MKSVKRFLVAVTLGLLFVGVAAADTLELRDGRVLKGKYL
Ga0209517_106920421	3300027854	Peatlands Soil	MKRVDRFLAAVVLGLFFAGVAAADTLELKDGRVLT
Ga0209169_107130191	3300027879	Soil	MNGRGRTIAAVAMGLFFAGAAAADTLELKDGRVLQGRYLGGTQAVLRFEIKGEVQ
Ga0209590_104554333	3300027882	Vadose Zone Soil	MNKIYRFLAAVALGLFFVGVAAADTLELKDGRVLKGKYLGGTQAVLRFEVSGEV
Ga0209488_104309821	3300027903	Vadose Zone Soil	MKRVNHFLAAVLLGLFFVGVAAADTLELKDGRVLKGK
Ga0209488_109582431	3300027903	Vadose Zone Soil	MKTVKQFLTMFALGLFFLGTAAADTLELKDGKVLKGKYLGGTQAVLRFELNGEV
Ga0209698_100224921	3300027911	Watersheds	MNRVNRFFVAAVLGLLFVGIAAADTLELKDGRVVQGKYL
Ga0265765_10003491	3300030879	Soil	MSGRVRMIAALALGLFLAGAAVADTLELKDGRILQGRYLGGTQAVVRFEVN
Ga0170818_1017055651	3300031474	Forest Soil	MTRFSRTMALAAVGLLFAGAAMADSLELKDGRVLTGRFLGGTQALMRFS
Ga0307469_107697681	3300031720	Hardwood Forest Soil	MKRANRFLSAVALGLFFVGAATADTLELKDGRILKGK
Ga0307475_103250111	3300031754	Hardwood Forest Soil	MNKFYRFLAVLALGLFYVGAAAADTLELRDGRVLKGRYLGGTQAVMRFEVNG
Ga0307473_108556622	3300031820	Hardwood Forest Soil	MSKRNRFFTATVLGLLLTGVAAADTLELRDGRVLRGRYLGGTQ
Ga0307478_107252441	3300031823	Hardwood Forest Soil	MKRWTGFAAAASLGLVFAGTAAADTLELKDGRILHGRFLGGTQATLRF
Ga0307479_119107962	3300031962	Hardwood Forest Soil	MNKVNRFLAAIALMLFYAGAASADTLELKDGRVLKGKYLGGTQ
Ga0307479_121059001	3300031962	Hardwood Forest Soil	MTRFTRFVAAAALGLLFVGVAAADTLELRDGRVVQGRFLGG
Ga0307471_1003191451	3300032180	Hardwood Forest Soil	MNKFYRFLAVLALVLISVRTAAADTLELRDGRVLKGRYHG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059378

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences