Metagenome / Metatranscriptome Family F059324

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059324
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	84 residues
Representative Sequence	FPYERAKFAAKGSKSGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRLSQGRYEWSRLVAALKRKDTSLLGE
Number of Associated Samples	110
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.25 %
% of genes from short scaffolds (< 2000 bps)	96.27 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.060 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (12.687 % of family members)
Environment Ontology (ENVO)	Unclassified (45.522 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.657 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.48% β-sheet: 0.00% Coil/Unstructured: 43.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF01636	APH	7.46
PF02012	BNR	5.22
PF02148	zf-UBP	2.99
PF07995	GSDH	1.49
PF13088	BNR_2	0.75
PF08924	DUF1906	0.75
PF14310	Fn3-like	0.75
PF00890	FAD_binding_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	2.99
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.49

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.06 %
Unclassified	root	N/A	11.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.06 %
Unclassified	root	N/A	11.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.06 %
Unclassified	root	N/A	11.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.61 %
Unclassified	root	N/A	11.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.24 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.75 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	14.93 %
Unclassified	root	N/A	11.94 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	7.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.24 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	14.93 %
Unclassified	root	N/A	11.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.24 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	14.93 %
Unclassified	root	N/A	11.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7.46 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.24 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	14.93 %
Unclassified	root	N/A	11.94 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	7.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.24 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	14.93 %
Unclassified	root	N/A	11.94 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	7.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.24 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11623876	Not Available	534	Open in IMG/M
3300000891\|JGI10214J12806_10816205	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300000953\|JGI11615J12901_10035042	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300001904\|JGI24736J21556_1027355	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300001990\|JGI24737J22298_10053074	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300002076\|JGI24749J21850_1008644	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300002899\|JGIcombinedJ43975_10072868	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300003267\|soilL1_10031065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1114	Open in IMG/M
3300003993\|Ga0055468_10218038	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300004114\|Ga0062593_100443672	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300004114\|Ga0062593_101672737	Not Available	694	Open in IMG/M
3300004156\|Ga0062589_102238888	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300004479\|Ga0062595_102461443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	518	Open in IMG/M
3300004480\|Ga0062592_100190180	Not Available	1433	Open in IMG/M
3300004643\|Ga0062591_102309709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	562	Open in IMG/M
3300005093\|Ga0062594_103216269	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300005289\|Ga0065704_10567919	Not Available	625	Open in IMG/M
3300005290\|Ga0065712_10084225	Not Available	2781	Open in IMG/M
3300005293\|Ga0065715_10288943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1068	Open in IMG/M
3300005294\|Ga0065705_10711980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	647	Open in IMG/M
3300005295\|Ga0065707_11142882	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005330\|Ga0070690_100299779	Not Available	1152	Open in IMG/M
3300005331\|Ga0070670_101195984	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005334\|Ga0068869_100830742	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005340\|Ga0070689_100641885	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300005340\|Ga0070689_101511390	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005343\|Ga0070687_100432493	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300005344\|Ga0070661_100260029	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005353\|Ga0070669_101655557	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005354\|Ga0070675_101454130	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005365\|Ga0070688_101512617	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005440\|Ga0070705_100730679	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300005444\|Ga0070694_101451714	Not Available	580	Open in IMG/M
3300005457\|Ga0070662_101379948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	607	Open in IMG/M
3300005458\|Ga0070681_11345673	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300005459\|Ga0068867_100876759	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005459\|Ga0068867_101740858	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005468\|Ga0070707_101656752	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005471\|Ga0070698_100218770	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300005545\|Ga0070695_100440018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	997	Open in IMG/M
3300005545\|Ga0070695_100980205	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300005547\|Ga0070693_100726340	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005563\|Ga0068855_101136689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	815	Open in IMG/M
3300005577\|Ga0068857_101111247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	763	Open in IMG/M
3300005614\|Ga0068856_101295048	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005615\|Ga0070702_100579057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	838	Open in IMG/M
3300005615\|Ga0070702_101450765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	563	Open in IMG/M
3300005615\|Ga0070702_101477873	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300005615\|Ga0070702_101847376	Not Available	506	Open in IMG/M
3300005616\|Ga0068852_102600504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	526	Open in IMG/M
3300005617\|Ga0068859_100313104	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300005617\|Ga0068859_101495678	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300005618\|Ga0068864_101408020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300005834\|Ga0068851_10990392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	530	Open in IMG/M
3300005841\|Ga0068863_101435614	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300005841\|Ga0068863_102615506	Not Available	514	Open in IMG/M
3300005842\|Ga0068858_100196018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1909	Open in IMG/M
3300005842\|Ga0068858_100745915	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005843\|Ga0068860_101235854	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005844\|Ga0068862_101061024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	804	Open in IMG/M
3300005844\|Ga0068862_101541808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	670	Open in IMG/M
3300005985\|Ga0081539_10022511	All Organisms → cellular organisms → Bacteria	4167	Open in IMG/M
3300006169\|Ga0082029_1360810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300006237\|Ga0097621_100822943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	861	Open in IMG/M
3300006755\|Ga0079222_10254438	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300006794\|Ga0066658_10928633	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300006844\|Ga0075428_101740677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300006845\|Ga0075421_101021853	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300006852\|Ga0075433_10631710	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300006852\|Ga0075433_11808254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	525	Open in IMG/M
3300009093\|Ga0105240_10843727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	989	Open in IMG/M
3300009094\|Ga0111539_13547070	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300009098\|Ga0105245_13002862	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300009148\|Ga0105243_10870445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	894	Open in IMG/M
3300009156\|Ga0111538_10880457	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300009156\|Ga0111538_13495851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	545	Open in IMG/M
3300009162\|Ga0075423_11638483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	692	Open in IMG/M
3300009174\|Ga0105241_10252952	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300009174\|Ga0105241_12539680	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300009177\|Ga0105248_10545117	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300009840\|Ga0126313_10696974	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300010036\|Ga0126305_10618745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	729	Open in IMG/M
3300010038\|Ga0126315_10212127	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300010038\|Ga0126315_11004449	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300010045\|Ga0126311_10061465	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300010045\|Ga0126311_10322233	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300010045\|Ga0126311_11828160	Not Available	515	Open in IMG/M
3300010046\|Ga0126384_11266898	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300010047\|Ga0126382_10732243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	834	Open in IMG/M
3300010047\|Ga0126382_11083459	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300010375\|Ga0105239_12186464	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300010396\|Ga0134126_11572668	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	724	Open in IMG/M
3300010397\|Ga0134124_10847171	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300010400\|Ga0134122_10790457	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300010400\|Ga0134122_12419219	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010400\|Ga0134122_13208346	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300011119\|Ga0105246_11512599	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300011332\|Ga0126317_10924805	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012212\|Ga0150985_109578013	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012960\|Ga0164301_10188961	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300013100\|Ga0157373_10378071	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300013297\|Ga0157378_13285872	Not Available	502	Open in IMG/M
3300013307\|Ga0157372_12115134	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	647	Open in IMG/M
3300013760\|Ga0120188_1016846	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300014325\|Ga0163163_10838194	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300014325\|Ga0163163_13196369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	511	Open in IMG/M
3300014326\|Ga0157380_10518759	All Organisms → cellular organisms → Bacteria → Proteobacteria	1162	Open in IMG/M
3300019487\|Ga0187893_10801452	Not Available	572	Open in IMG/M
3300021445\|Ga0182009_10528650	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300025911\|Ga0207654_11244484	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300025917\|Ga0207660_10892780	Not Available	725	Open in IMG/M
3300025923\|Ga0207681_10554097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	946	Open in IMG/M
3300025924\|Ga0207694_10082771	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300025936\|Ga0207670_11138988	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300025941\|Ga0207711_11253948	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300025981\|Ga0207640_11176746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	681	Open in IMG/M
3300026035\|Ga0207703_10658865	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300026035\|Ga0207703_11136041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	751	Open in IMG/M
3300026078\|Ga0207702_12445831	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300026089\|Ga0207648_10410687	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300026095\|Ga0207676_10117838	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300026095\|Ga0207676_12206669	Not Available	549	Open in IMG/M
3300026118\|Ga0207675_100558173	Not Available	1145	Open in IMG/M
3300027880\|Ga0209481_10311074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300027909\|Ga0209382_11866762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	582	Open in IMG/M
3300028146\|Ga0247682_1097066	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300028380\|Ga0268265_11149196	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300028380\|Ga0268265_12176667	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031538\|Ga0310888_10536013	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031716\|Ga0310813_10809052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	844	Open in IMG/M
3300031731\|Ga0307405_10790378	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300031901\|Ga0307406_11169686	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300032180\|Ga0307471_101321133	Not Available	883	Open in IMG/M
3300034820\|Ga0373959_0077194	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.48%
Environmental	Environmental	45.52%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.48%
Terrestrial	Environmental → Terrestrial	44.03%
Aquatic	Environmental → Aquatic	1.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	26.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.37%
Roots	Host-Associated → Plants → Roots	2.24%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Marine	Environmental → Aquatic → Marine	0.75%
Cave	Environmental → Terrestrial → Cave	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	23.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.15%
Loam	Environmental → Terrestrial → Soil → Loam	14.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.24%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	23.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.18%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	12.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.49%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.75%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2	Host-Associated	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_116238761	3300000787	Soil	RAKFVVKAKRRTEAFKALKVAAEKAITTGKANEMLTGLETDKTSDFSELSEGSFKWSRLVAALKRKDTSLLSE*
JGI10214J12806_108162051	3300000891	Soil	EQNGSRNEAFKALSVAAEKAISTGKASEMLSGLETDKAGDFHRLAQGRQEWTRLVAALKRKDTSLLLSKTQFQ*
JGI11615J12901_100350422	3300000953	Soil	FPYERAKLAAKVSPARTDAFKALTDAAEKAIHTGKASEMLTGLESDKSGDFSKLSQGRFEWARLVAALKRRDTTLLGE*
JGI24736J21556_10273551	3300001904	Corn Rhizosphere	YRFPYERAKLAMKGSHNSAAFKALNAAAEKAIHTGKANEMLSGLEEDKTGDFSKLSQGSVEWGRLVAALKRKDTSLLSE*
JGI24737J22298_100530744	3300001990	Corn Rhizosphere	PYERAKLAMKGSHNSAAFKALNAAAEKAIHTGKANEMLSGLEEDKTGDFSKLSQGSVEWGRLVAALKRKDTSLLSE*
JGI24749J21850_10086443	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	EKQYPRDYRFPYERAKFAAKGSKSGSQSEALKALTVAAQKAITTGKANEMLNGLESDKGGDFSRISQGRFEWSRLVAALKRKDTSLLGE*
JGIcombinedJ43975_100728681	3300002899	Soil	PYERAKFAAKGTKSRSQSEAFKALTVAAQKAITTGKASEMLDGLESDKSGDFSRISQGRFEWSRLVAALKRKDTSLLGE*
soilL1_100310651	3300003267	Sugarcane Root And Bulk Soil	RDYRFPYERAKFAMKGSSRSEAFKALTVAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0055468_102180382	3300003993	Natural And Restored Wetlands	YRFPYERAKLAVKSARRSSRSEAFKALNVAAQKAISTGKAGEMLSGLENDKSGDFSRLSQGRNEWSRLVVALKRRDTSLLNE*
Ga0062593_1004436721	3300004114	Soil	KLAVKGSQASSRDEAFKALNSAAEKAISTGKAGEMLNGLESDKSGDFSKLAQGRYEWSRLVAALKRKDPSLLGE*
Ga0062593_1016727371	3300004114	Soil	RAKFAVKGSQSSSRTEAFQALTIAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0062589_1022388882	3300004156	Soil	AKLAVKGAQAKSKTEAFKALNAAAEKAINTGKANEMLSGLETDKSGDFSDLSRGRLEWGRLVAALKRKDPSLLSE*
Ga0062595_1024614432	3300004479	Soil	FPYERAKLAMKGSRRSEAFKALNVAAEKAITTGKANEMLNGLETDKSGDFSKISQGRFEWSRLVAALKKKDTSLLSE*
Ga0062592_1001901801	3300004480	Soil	RDYRFPYERAKLAVKVSPARTDAFKALTDAAEKAIHTGKANEMLTGLETDKTGDFSKLSQGRFEWARLVAALKKRDTTLLGE*
Ga0062591_1023097091	3300004643	Soil	FPYERAKFAVKGSQSTSRTEAFRALTVAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRLEWSRLVAALKRKDTSLLGE*
Ga0062594_1032162692	3300005093	Soil	KVEKQYPRDYRFPYERAKFAAKGSKSRSQSEAFKALTVAAQKAITTGKANEMLDGLESDKSGDFSRISQERLEWSRLVAALKRKDTSLLGE*
Ga0065704_105679192	3300005289	Switchgrass Rhizosphere	RDYRFPYERAKFAVKGSQSSSRTEAFQALTIAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0065712_100842254	3300005290	Miscanthus Rhizosphere	KLAANGSKPTSRNAAFKALSVAAEKAITTGKANEMLSGLELDKSGDFQKLAQGRQEWTKLMTALKRRDTSLLGREHSND*
Ga0065715_102889432	3300005293	Miscanthus Rhizosphere	QYPRDYRFPYERAKLAANGSKPTSRNAAFKALSVAAEKAITTGKANEMLSGLELDKSGDFQKLAQGRQEWTKLMTALKRRDTSLLGREHSND*
Ga0065705_107119801	3300005294	Switchgrass Rhizosphere	QYPRDYRFPYERAKLAMKGSHDSAAFKALNAAAEKAIQTGKTGEMLSGLEEDKTGDFSKLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0065707_111428822	3300005295	Switchgrass Rhizosphere	KLAAKVSPARTEAFKALTDAAETAIHTGKANEMLTGLESDKAGDFSKLSQGRFEWARLVAALKRRDTTLLGE*
Ga0070690_1002997791	3300005330	Switchgrass Rhizosphere	RFTYERAKLAANGSKATSRTEAFKALSAAAEKAITTGKANEMLSGLEADKSGDFQKLAQGRQEWTKLLTALKRKDTTLLGRDHTND*
Ga0070670_1011959841	3300005331	Switchgrass Rhizosphere	DYRFPYERAKFAVKGSSRTEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLGE*
Ga0068869_1008307421	3300005334	Miscanthus Rhizosphere	KQYPRDYRFSYERAKLAMTGSHSEAAFKALTAAAEKAIQSGKAGEMLSGLEEDKTGDFSKLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0070689_1006418851	3300005340	Switchgrass Rhizosphere	PYERAKFAVKGSQSTSRTEAFRALTVAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRLEWSRLVAALKRKDTSLLGE*
Ga0070689_1015113901	3300005340	Switchgrass Rhizosphere	LAVKGAQAKSKTEAFKALNAAAEKAINTGKANEMLSGLETDKSGDFSDLSRGRLEWGRLVAALKRKDPSLLSE*
Ga0070687_1004324931	3300005343	Switchgrass Rhizosphere	QAFAKVEKQYPRDYRFPYERAKFAAKGTKSRSQSEAFKALTTAAQKAITTGKASEMLDGLESDKSGDFSRISQGRFEWSRLVAALKRKDTSLLGE*
Ga0070661_1002600291	3300005344	Corn Rhizosphere	QAFAKVEKQYPRDYRFPYERAKFAAKGSKSGSQSEALKALTVAAQKAITTGKANEMLNGLESDKSGDFSRISQGRFEWSRLVAALKRKDTSLLGE*
Ga0070669_1016555571	3300005353	Switchgrass Rhizosphere	ANGSKATSRTEAFKALSAAAEKAITTGKANEMLSGLEADKSGDFQKLAQGRQEWTKLLTALKRKDTTLLGRDHTND*
Ga0070675_1014541302	3300005354	Miscanthus Rhizosphere	ERAKLAVKGSRRTEAFKALNVAAEKAITTGKANEMLNGLETDKAGDFSKISQGRFEWSRLVAALKKKDTSLLSE*
Ga0070688_1015126171	3300005365	Switchgrass Rhizosphere	DYRFPYERAKFAAKGTKSRSQSEAFKALTSAAQKAITTGKASEMLDGLESDKSGDFSRISQGRFEWSRLVAALKRKDTSLLGE*
Ga0070705_1007306791	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MFPVFVKVEKKYPRDYRFPYERAKLAMKGSRRAEAFKALNVAAEKAITTGKANEMLNGLETDKSGDFSKISQGRFEWSRLVAALKKKDTSLLSE*
Ga0070694_1014517141	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RAKLAMTGSHSEAAFKALTTAAEKAIQTGKAGEMLSGLEEDKAGDFSKLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0070662_1013799482	3300005457	Corn Rhizosphere	FAVKGSKGGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRLSQGRYEWSRLVAALKRKDTSLLGE*
Ga0070681_113456731	3300005458	Corn Rhizosphere	AKVEKQYPRDYRFPYERAKFVVKSRKSAKSEAFKALNVAAEKAITTGKANEMLNGLESDKSGDFSSLSQGRYEWSRLLAALKRKDTSLLSE*
Ga0068867_1008767592	3300005459	Miscanthus Rhizosphere	AKFAVKGSQSTSRTEAFRALTVAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRLEWSRLVAALKRKDTSLLGE*
Ga0068867_1017408581	3300005459	Miscanthus Rhizosphere	RDYRFSYERAKLAMTGSHNEAAFKALTTAAEKAIQSGKAGEMLSGLEEDKAGDFSKLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0070707_1016567521	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SKATSRTEAFKALSAAAEKAITTGKANEMLSGLEADKSGDFQKLAQGRQEWTKLLTALKRKDTTLLGRDHTND*
Ga0070698_1002187703	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	KLAVKGSKTSSRAAFKALNSAAEKAISAGKAGEMLNGLETDKSGDFSSLSQGSYEWGRLVAALKRKDPSLLSE*
Ga0070695_1004400181	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VERQYPRDYRFPYERAKLAVKGSKASSRTEAFKALNAAAEKAITTGKANEMLDGLENDKSGDFSRLAQGRYEWSRLVAALKRKDPSLLSE*
Ga0070695_1009802052	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	KVEKQYPRDYRFPYERAKLAVTGSHRAAAFKALNSAAEKAITTGKANEMLSGLETDKADDFSKLSQARPEWSRLVAALKKKDTSLLSE*
Ga0070693_1007263401	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VAKGTQSSSRDEAFKALSVAAERAISNGKASEMLSGLETDKTGDFHRLAQGRQEWLRLVAALKRKDTSLLLTKTQFQ*
Ga0068855_1011366893	3300005563	Corn Rhizosphere	PRDYRFPYERAKLVAKGSQSGARDEAFKALSVAAERAITAGKANEMLSGLETDKAGDFHRLAQGRQEWTRLVAALKRKDTSLLLTKAQFQ*
Ga0068857_1011112471	3300005577	Corn Rhizosphere	KVEKQYPRDYRFPYERAKFAVKGSQSTSRTEAFRALTVAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRLEWSRLVAALKRKDTSLLGE*
Ga0068856_1012950483	3300005614	Corn Rhizosphere	FPYERAKLAVTGSHRAAAFKALNSAAEKAITTGKANEMLSGLETDKADDFSKLSQARPEWSRLVAALKKKDTSLLSE*
Ga0070702_1005790573	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	FPYERAKFAVKGSQSTSRTEAFRALTVAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLGE*
Ga0070702_1014507652	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	EKQYPRDYRFPYERAKFAAKGTKSRSQSEAFKALTAAAQKAITTGKASEMLDGLESDKSGDFSRISQGRFEWSRLVAALKRKDTSLLGE*
Ga0070702_1014778732	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	FAKVEKQYPRDYRFPYERAKFVVKSRKSAKSEAFKALNVAAEKAITTGKANEMLNGLESDKSGDFSSLSQGRYEWSRLLAALKRKDTSLLSE*
Ga0070702_1018473762	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	QALAKVEKQYPRDYRFSYERAKLAMTGSHSEAAFKALTTAAEKAIQSGKAGEMLSGLEEDKAGDFSKLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0068852_1026005041	3300005616	Corn Rhizosphere	KVERQYPRDYRFPYERAKLAVKGSQASSRTEAFKALNTAAEKAITTGKANEMLNGLETDKSGDFSKLAQGRYEWSRIVAALKRKDTSLLTE*
Ga0068859_1003131041	3300005617	Switchgrass Rhizosphere	FQAFAKVEKQYPRDYRFPYERAKFAAKGSRSGSQSEAFKALTTAAQKAITTGKANEMLTGLETDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0068859_1014956782	3300005617	Switchgrass Rhizosphere	QAFAKVEKQYPRDYRFPYERAKFVVKSRKSAKSEAFKALNVAAEKAITTGKATEMLNGLESDKSGDFSSLSQGRYEWSRLLAALKRKDTSLLSE*
Ga0068864_1014080203	3300005618	Switchgrass Rhizosphere	FPYERAKFAAKGSKSGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRLSQGRYEWSRLVAALKRKDTSLLGE*
Ga0068851_109903921	3300005834	Corn Rhizosphere	KFAVKGSKGGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRLSQGRYEWSRLVAALKRKDTSLLGE*
Ga0068863_1014356141	3300005841	Switchgrass Rhizosphere	FPYERAKFAAKGSRSGSQSEAFKALTTAAQKAITTGKANEMLTGLETDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0068863_1026155061	3300005841	Switchgrass Rhizosphere	YERAKLAVKVSPARTDAFKALTDAAEKAIHTGKANEMLTGLETDKTGDFSKLSQGRFEWARLVAALKKRDTTLLGE*
Ga0068858_1001960182	3300005842	Switchgrass Rhizosphere	FQAFVKVEKQYPRDYRFPYERAKLAMKGSRRAEAFKALNVAAEKAITTGKANEMLNGLETDKSGDFSKISQGRFEWSRLVAALKKKDTSLLSE*
Ga0068858_1007459151	3300005842	Switchgrass Rhizosphere	QYPRDYRFPYERAKLAVKVSPARTDAFKALTDAAEKAIHTGKANEMLTGLETDKTGDFSKLSQGRFEWARLVAALKKRDTTLLGE*
Ga0068860_1012358543	3300005843	Switchgrass Rhizosphere	SYERAKLAMTGSHNEAAFKALTTAAEKAIQSGKAGEMLSGLEEDKTGDFSKLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0068862_1010610241	3300005844	Switchgrass Rhizosphere	ERQYPRDYRFPYERAKLAVKGSQASSRTEAFKALNTAAEKAITTGKANEMLNGLESDKAGDFSKLAQGRYEWSRLVAALKRKDTSLLSE*
Ga0068862_1015418082	3300005844	Switchgrass Rhizosphere	PKVFQAFAKVEKQYPRDYRFPYERAKFAAKGSKSGSQSEALRALTVAAQKAITTGKANEMLNGLESDKSGDFSRISQGRFEWSRLVAALKRKDTSLLGE*
Ga0081539_100225115	3300005985	Tabebuia Heterophylla Rhizosphere	LVVNGSQAGHEAAFKALSVAAERAIGSGKANEMLSGLEADKAGDFHLLVHGHQEWTRLVAALKRKDTSLLPTKTQFQ*
Ga0082029_13608101	3300006169	Termite Nest	YERAKLAANSSKASSRTEAFKALSVAAEKAISTGKANEMLSGLEADKSGDFQKLAQGRQEWSKLTTALKRRDSSLLSREHSND*
Ga0097621_1008229431	3300006237	Miscanthus Rhizosphere	ERAKLVVKSSQSGARDEAFKALSVAAERAISTGKANEMLSGLETDKTGDFHRLAQGRQEWTRLVAALKRKDTSLLLSKTQFQ*
Ga0079222_102544383	3300006755	Agricultural Soil	ERAKLVAKSSQSGARDEAFKALSVAAERAISAGKASEMLSGLETDKDGDFHRLAQGRQEWTRLVAALKRKDTSLLPTKTQFQ*
Ga0066658_109286331	3300006794	Soil	KIFQAFKKIEKQYPRDYRFPYERAKLVVKGSQANSREAFKALNNAAEKAISAGKANEMLNGLETDKTGDFSRLSQGRYEWGRLVAALKRKDPSLLSE*
Ga0075428_1017406771	3300006844	Populus Rhizosphere	DYRFPYERAKLAAKGSKATSRNEAFKALSVAAEKAISTGKASEMLSGLEADKAGDFQKLAQGRQEWTRLLAALRRKDTSLLAKAQFQ*
Ga0075421_1010218533	3300006845	Populus Rhizosphere	RFPYERAKLALKGQRRTEAFKALNAAAEKAITTGKANEMLNGLETDKAGDFSKISQGRFEWSRLVAALKKKDTSLLSE*
Ga0075433_106317101	3300006852	Populus Rhizosphere	VKVENQYPRDYRFPYERAKLAVKGARRTEAFKALNVAAEKAIHTGKANEMLNGLEEDKSGDFSKISQGRYEWSRLVAALKRKDTSLLSGE*
Ga0075433_118082542	3300006852	Populus Rhizosphere	KQYPRDYRFPYERAKLAVKGSQASSRDEAFKALNTAAEKAIHTGKANEMLDGLQEDKSGDFSKLSQKRNEWSTLVVALKRKDTSLLTE*
Ga0105240_108437271	3300009093	Corn Rhizosphere	KFAAKGSRPGSQSEAFKALTTAAQKAITTGKANEMLTGLESDKSGDFQRLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0111539_135470702	3300009094	Populus Rhizosphere	YERAKLAMKGSHSEAAFKALNTAAEKAIQTGKAGEMLSGLEEDKQGDFSKISQGRFEWSRLVAALKRKDTSLLGE*
Ga0105245_130028622	3300009098	Miscanthus Rhizosphere	AKVEKQYPRDYRFPYERAKFAAKGSKSRSQSEAFKALTVAAQKAITTGKANEMLDGLESDKSGDFSRISQERLEWSRLVAALKRKDTSLLGE*
Ga0105243_108704451	3300009148	Miscanthus Rhizosphere	QYPRDYRFPYERAKLAANGSKATSRTEAFKALSVAAEKAISTGKANEMLSGLEADKAGDFQKLAQGRQEWSKLTTALKRRDTSLLSRDHSND*
Ga0111538_108804573	3300009156	Populus Rhizosphere	ERAKLAVKGAQAKSKTEAFKALNTAAEKAINTGKANEMLSGLETDKSGDFSDLSRGRLEWGRLVAALKRKDPSLLSE*
Ga0111538_134958512	3300009156	Populus Rhizosphere	FQAIAKIEKQYPRDYRFPYERAKLVAKGAKKKEAFKALNVAAEKAINTGKANEMLTGLETDKTGDFSELSQGRYEWSRLVAALKRKDTSLLSE*
Ga0075423_116384831	3300009162	Populus Rhizosphere	KQYPRDYRFPYERAKLAVKGSKTNSREAFKALNSAAEKAISAGKANEMLNGLETDKTGDFSRLSQGRYEWSRLVAALKRKDPSLLNE*
Ga0105241_102529523	3300009174	Corn Rhizosphere	KDEKKYPRDYRLPYERAKLAMKGSRRAEAFKALNVAAEKAITTGKANEMLNGLETDKSGDFSKISQGRFEWSRLVAALKKKDTSLLSE*
Ga0105241_125396801	3300009174	Corn Rhizosphere	FPYERAKFAAKGSKSRSQSEAFKALTVAAQKAITTGKANEMLDGLESDKSGDFSRISQERLEWSRLVAALKRKDTSLLGE*
Ga0105248_105451172	3300009177	Switchgrass Rhizosphere	LPILRFLLVEKQYPRDYRFPYERAKFAAKGSKSGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRLSQGRYEWSRLVAALKRKDTSLLGE*
Ga0126313_106969742	3300009840	Serpentine Soil	RAKLAAKGSKANSRTEAFKALSDAAEKAISTGKANEMLSGLEADKAGDFQKLAQGRQEWTRLLAALKRKDTTLLAKAQFQ*
Ga0126305_106187451	3300010036	Serpentine Soil	IIQAFAKVEKQYPRDYRFPYERAKFAVRGSQANSRSEAFKALTVAAQKAISTGKANEMLNGLETDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLGE*
Ga0126315_102121271	3300010038	Serpentine Soil	QYPRDYRFPYERAKFAVKVSKASSQSEAFKALTIAAQKAISTGKANEMLSGLETDKTGDFSRISQGRFEWSRLVAALKRKDTSLLSE*
Ga0126315_110044491	3300010038	Serpentine Soil	QYPRDYRFPYERAKLAVKGARASSRNEAFKALNAAAEKAINTGKANEMLNGLESDKSGDFSELAQGRYEWSRLVAALKRKDPSLLSE*
Ga0126311_100614651	3300010045	Serpentine Soil	CLYASDRVKLAAKDSRASSRTAAFKALNAAAEKAINTGKATEMLNGLESDKSGDFSELSQGRYEWGRLVAALKRKDPSLLSE*
Ga0126311_103222331	3300010045	Serpentine Soil	AKLAMKGARGSSRNEAFKALNAAAEKAINTGKANEMLNGLENDKSGDFSQISQGRYEWSRLVAALKRKDPSLLSE*
Ga0126311_118281601	3300010045	Serpentine Soil	KGARASSRNEAFKALNAAAEKAINTGKANEMLNGLESDKSGDFSQISQGRYEWSRLVAALKRKDTSLLSE*
Ga0126384_112668982	3300010046	Tropical Forest Soil	FPYERAKFAVKGSKTGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKDGDFSRLSQGRFGRLVAALKRKDTSLLGE*
Ga0126382_107322431	3300010047	Tropical Forest Soil	QAFAKVEKQYPRDYRFPYERAKLAVKGPQDHDHSEAFKALNVAAEKAITTGKANEMLDGLETDKARDFSILSHGHNEWARLVVALKRKDTSLLSE*
Ga0126382_110834591	3300010047	Tropical Forest Soil	ERAKLAVKGSQRAEAFKALNTAAEKAITTGKANEMLTGLETDKADDFSKLSQARPEWSRLVAALKKKDPSLLSE*
Ga0105239_121864641	3300010375	Corn Rhizosphere	RFPYERAKVVVKGSKRDSRKEAFKALNVAAEKAITTGKANEMLSGLETDKSGDFSELSQGRDKWGRLVAALKRKDPSLLSE*
Ga0134126_115726681	3300010396	Terrestrial Soil	KQYPRDYRFPYERAKFAVKGSKADSRSEAFKALTTAAQKAISTGNSNEMLNGLETDKSGDFSRLSQGRTEWGRLVAALKRKDTSLLGE*
Ga0134124_108471713	3300010397	Terrestrial Soil	FAKVEKQYPRDYRFPYERAKLAMKGSRRAEAIKALNAAAEKAITTGKATEMLNGLETDKSGDFSKISQGRYEWSRLVAALKKKDTSLLSE*
Ga0134122_107904572	3300010400	Terrestrial Soil	SKIAQAFAKVEKQYPRDYRFPYERAKFAVKGSKGGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRISQGRFEWSRLVAALKRKDTSLLGE*
Ga0134122_124192191	3300010400	Terrestrial Soil	PYERAKFVMKASKRKARSEALKALNVAAEKAITTGKANEMLNGLESDKAGEFSPLSQGRYEWSRIVAALKRKDTSLLSE*
Ga0134122_132083461	3300010400	Terrestrial Soil	QALAKVEKQYPRDYRVPYERAKLAMKGSHADAALKALNSEAEKAIQTGKAGEMLSGLETDKQGDFSKISQGRFEWSRLVAALKRKDTSLLSE*
Ga0105246_115125992	3300011119	Miscanthus Rhizosphere	VQAFVKVEKQYPRDYRFPYERAKLAIKGSRRTEAFKALNVAAEKAIHTGKANEMLDGLEEDKSGDFSKISQGRYEWSRLVAALKRKDTSLLSE*
Ga0126317_109248052	3300011332	Soil	RFPHERAKFAAKGSRAGSQSEAFKALTTAAQKAITTGKASEMLTGLETDKSGDFSKLWQGRFEWARLVAALKRKDTSLLSE*
Ga0150985_1095780131	3300012212	Avena Fatua Rhizosphere	YERAKFAAKGSRSGSQSEAFKALTSAAQKAITTGKANEMLTGLETDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLSE*
Ga0164301_101889613	3300012960	Soil	AKLVAKGPQSSSRDEAFKALSVAAERAISNGKASEMLSGLETDKTGDFHRLAQGRQEWLRLVAALKRKDTSLLLTKTQFQ*
Ga0157373_103780711	3300013100	Corn Rhizosphere	FPYERAKFAAKGSKSGSQNEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRISQGRFEWSRLVAALKRKDTSLLGE*
Ga0157378_132858721	3300013297	Miscanthus Rhizosphere	FAAKGSKSGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRLSQGRYEWSRLVAALKRKDTSLLGE*
Ga0157372_121151341	3300013307	Corn Rhizosphere	AKFAAKGSKSGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRLSQGRYEWSRLVAALKRKDTSLLGE*
Ga0120188_10168462	3300013760	Terrestrial	KIIQAFAKVEKQYPRDYRFPYERAKFVVRAKRRTEAFKALKVAAEKAITTGKANEMLSGLETDKTSDFSELSEGSSKWSRLVAALKRKDTSLLSE*
Ga0163163_108381942	3300014325	Switchgrass Rhizosphere	ERAKLAVKGSQASSRTEAFKALNTAAEKAITTGKANEMLNGLESDKSGDFSKLARGRYEWSRLVAALKRKDTSLLSE*
Ga0163163_131963691	3300014325	Switchgrass Rhizosphere	SSRIIQAIAKVEKQYPRDYRFPYERAKLAVKGSRRTEAFKALNAAAEKAITTGKANEMLNGLETDKAGDFSKISQGRFEWSRLVAALKKKDTSLLSE*
Ga0157380_105187592	3300014326	Switchgrass Rhizosphere	SGSRDAAFKALSVAAERAISTGKASEMLSGLETDKSGDFHRLSQGRQEWTRLVAALKRKDTSLLSKAQFNDSAHSN*
Ga0187893_108014522	3300019487	Microbial Mat On Rocks	FPYERAKLAVRGSQASSRNEAFKALNSAAEKAISTGKANEMLNGLETDKAGDFSKLAQGRYEWSRLVAALKRKDPSLLGE
Ga0182009_105286502	3300021445	Soil	YPRDYRFPYERAKLVVKGSKTNSRAAFKALNVAAEKAISAGKANEMLSGLETDKSGDFSRLSQGSNEWGRLVAALKRKDPSLLSE
Ga0207654_112444841	3300025911	Corn Rhizosphere	RAKFVVKSRKSAKSEAFKALNVAAEKAITTGKANEMLNGLESDKSGDFSSLSQGRYEWSRLLAALKRKDTSLLSE
Ga0207660_108927801	3300025917	Corn Rhizosphere	ANGSKATSRTEAFKALSAAAEKAITTGKANEMLSGLEADKSGDFQKLAQGRQEWTKLLTALKRKDTTLLGRDHTND
Ga0207681_105540972	3300025923	Switchgrass Rhizosphere	FQAFAKVEKQYPRDYRFPYERAKFAAKGTKSRSQSEAFKALNAAAQKAISTGKANEMLDGLESDKSGDFSRISQGRFEWSRLVAALKRKDTSLLGE
Ga0207694_100827714	3300025924	Corn Rhizosphere	PYERAKLAMKGSHNSAAFKALNAAAEKAIHTGKANEMLSGLEEDKTGDFSKLSQGSVEWGRLVAALKRKDTSLLSE
Ga0207670_111389881	3300025936	Switchgrass Rhizosphere	YERAKLAVKGAQAKSKTEAFKALNAAAEKAINTGKANEMLSGLETDKSGDFSDLSRGRLEWGRLVAALKRKDPSLLSE
Ga0207711_112539482	3300025941	Switchgrass Rhizosphere	KVFQAFAKVEKQYPRDYRFPYERAKFAAKGSRSGSQSEAFKALTSAAQKAITTGKANEMLTGLETDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLSE
Ga0207640_111767461	3300025981	Corn Rhizosphere	FAKVEKQYPRDYRFPYERAKFAVKGSKGGSQSEAFKALTVAAQKAISTGKANEMLNGLESDKSGDFSRLSQGRYEWSRLVAALKRKDTSLLGE
Ga0207703_106588651	3300026035	Switchgrass Rhizosphere	SKIFQAFTKLERQYPRDYRFPYERAKLAVKVSPARTDAFKALTDAAEKAIHTGKANEMLTGLETDKTGDFSKLSQGRFEWARLVAALKKRDTTLLGE
Ga0207703_111360412	3300026035	Switchgrass Rhizosphere	PKLIQAFAKVEKQYPRDYRFPYERAKFAVRGSSRSEAFKALTVAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRFEWSRLVAALKKKDTSLLSE
Ga0207702_124458312	3300026078	Corn Rhizosphere	ALAKVEKQYPRDYRFPYERAKLAVTGSHRAAAFKALNSAAEKAITTGKANEMLSGLETDKADDFSKLSQARPEWSRLVAALKKKDTSLLSE
Ga0207648_104106873	3300026089	Miscanthus Rhizosphere	SFAKVEKQYPRDYRFPYERAKFAVKGSQSTSRTEAFRALTVAAQRAISTGKANEMLNGLESDKSGDFSRLSQGRLEWSRLVAALKRKDTSLLGE
Ga0207676_101178384	3300026095	Switchgrass Rhizosphere	RFSYERAKLAMTGSHNEAAFKALTTAAEKAIQSGKAGEMLSGLEEDKTGDFSKLSQGRFEWSRLVAALKRKDTSLLSE
Ga0207676_122066692	3300026095	Switchgrass Rhizosphere	SKANSRTEAFKALQAAAEKAISTGKANEMLSGLEADKAGDFQKLAQGRQEWNKLLAALKRKDSSLLAKAQFQ
Ga0207675_1005581731	3300026118	Switchgrass Rhizosphere	SKATSRTEAFKALSAAAEKAITTGKANEMLSGLEADKSGDFQKLAQGRQEWTKLLTALKRKDTTLLGRDHTND
Ga0209481_103110742	3300027880	Populus Rhizosphere	ERQYPRDYRFPYERAKLAAKGSKATSRNEAFKALSVAAEKAISTGKASEMLSGLEADKAGDFQKLAQGRQEWTRLLAALRRKDTSLLAKAQFQ
Ga0209382_118667621	3300027909	Populus Rhizosphere	RFPYERAKLALKGQRRTEAFKALNAAAEKAITTGKANEMLNGLETDKAGDFSKISQGRFEWSRLVAALKKKDTSLLSE
Ga0247682_10970661	3300028146	Soil	VKGSKSDSRDEAFKALSVAAERAITAGKASEMLSGLETDKAGDFHRLAQSRQEWTQLVAALKRKDTSLLLIKASFQ
Ga0268265_111491962	3300028380	Switchgrass Rhizosphere	ERAKLAVKGSQASSRTEAFKALNTAAEKAITTGKANEMLNGLESDKAGDFSKLAQGRYEWSRLVAALKRKDTSLLSE
Ga0268265_121766673	3300028380	Switchgrass Rhizosphere	RAKLAANGSKPTSRNAAFKALSVAAEKAITTGKANEMLSGLEVDKSGDFQKLAQGRQEWTKLMTALKRRDTSLLGREHSND
Ga0310888_105360132	3300031538	Soil	KVERQYPRDYRFTYERAKLAANGSKATSRTEAFKALSAAAEKAITTGKANEMLSGLEADKSGDFQKLAQGRQEWTKLLTALKRKDTTLLGRDHTND
Ga0310813_108090522	3300031716	Soil	QYPRDYRFPYERAKLAANGTKPTSRNAAFKALSVAAEKAITTGKANEMLSGLEVDKSGDFQKLAQGRQEWTKLMTALKRRDTSLLGREHSND
Ga0307405_107903781	3300031731	Rhizosphere	FPYERAKFVVKSRKSAKSEAFKALNVAAEKAITTGKANEMLNGLESDKSGDFSSLSQGRYEWDRLVAALKRKDTSLLSE
Ga0307406_111696861	3300031901	Rhizosphere	FSYERAKLAVKGSQASSRTEAFKALNAAAEKAISTGKASEMLNGLETDKAGDFSKLAQGRYEWSRLVAALKRKDTSLLSE
Ga0307471_1013211331	3300032180	Hardwood Forest Soil	YRFSYERAKLAMTGSHSEAAFKALTTAAEKAIQSGKAGEMLSGLEEDKAGDFSKLSQGRFEWSRLVAALKRKDTSLLSE
Ga0373959_0077194_531_761	3300034820	Rhizosphere Soil	RAKFAAKGSRSGSQSEAFKALTTAAQKAITTGKANEMLTGLETDKSGDFSRLSQGRFEWSRLVAALKRKDTSLLSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059324

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences